echoSBML.py
|
| echoSBML.py Language: Python |
| Summary | Simple program that writes out the SBML file given to it as input. |
| Author(s) | Mike Hucka (mhucka AT caltech.edu) |
| Version | 1.0 (16 Dec. '08) |
| Needs | libSBML version 3 |
| SVN | Browse Link for copying |
Description
This is a simple demonstration program that takes two arguments. The first argument is a path to a file presumed to be in SBML format, and the second is a path to a destination file. This program reads the input file using libSBML and writes it to the destination file. As a consequence of the fact that it uses libSBML, the resulting text is also reformatted and pretty-printed.
Installation instructions
- Install libSBML if you have not already done so.
- Find a location in your file system where you want to copy the files.
- Copy the SVN link (see box at right) and use it in your SVN client to check out a copy of the files.
- Change your working directory (in your shell or whatever you're doing) to the echoSBML directory that you checked out from SVN.
- Make sure to set up your environment variables (e.g., PYTHONPATH) as needed for your installation of Python. See the libSBML documentation for more information.
Usage
echoSBML.py /path/to/input/file/name.xml /path/to/output/file.xml
Known problems/issues
None.
Licensing terms and distribution
This software is released under the terms of the LGPL.