SBML.org — the global portal for all things SBML

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Software by the SBML Team and the BioModels.net Team

The SBML Project helps develop a variety of software packages for working with SBML. (Many more third-party packages also support SBML—visit the SBML Software Guide to find out more about them!)

LibSBML

A free, open-source API library for working with SBML content. It supports many programming languages and operating systems.

JSBML

A free, open-source, pure-Java library for working with SBML. It emulates libSBML's API, with more Java idioms and without native object code.
 

SBMLToolbox

A free, open-source package for working with SBML in MATLAB. It provides functions for reading, writing, manipulating, and simulating SBML models.

SBML Converters

The BioModels Database team provides several converters between SBML and other formats.
 

SBMLeditor

A portable (written in Java), low-level, tree-structured editor for SBML. It supports annotations and validation.

SBML Test Suite

A conformance testing suite for assessing a simulator's support for SBML. (Currently only available online; you can also download the tests by themselves.)

Models

The SBML Project does not itself produce models; our efforts are more directed towards developing infrastructure for modeling. However, our alliances and related projects do produce models.

BioModels Database

An open and free database of models curated by humans, BioModels Database allows biologists to store, search and retrieve published mathematical models of biological interests. Models are annotated and linked to relevant data resources, such as publications, databases of compounds and pathways, controlled vocabularies, and more.

Software and models from other organizations

There are hundreds of other resources for SBML, including other databases and software tools. Please visit the SBML Software Guide to find out more about them.

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This page was last modified 16:15, 29 July 2011.



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