Agenda
Updated 2007-09-09.
Contents |
Topics to discuss (issues to settle?)
- What functionality to support? (i.e. what do we actually need...)
- Where is the line between standard and implementation? (i.e. what is the responsability of the language and what is the responsability of the tools)
- What are the dependencies? (i.e. coordination with core changes and other proposed extensions)
- What is the timeline? (i.e. when can we come up with the first real draft...)
Schedule (all times EDT):
Sunday, September 9
- 8:00 am - 8:30 am: Coffee, video links, etc.
- 8:30 am - 10:30 am: Live session 1 - Short presentations
- Mike Hucka: intro-to-composition-meeting-2007-09-09.pdf: Introduction to composition meeting
- Ion Moraru: Use_cases_VCell_strategy.ppt: Modeler's viewpoint - simple use cases...
- Wolfram Liebermeister: Model merging with semanticSBML
- Michael Blinov: Leveraging BioPAX and other ontology concepts for modularity and model reuse 20070909.ppt
- 11:50 am - 12:00 pm: Break
- 12:00 - 2:00 pm: Live session 2
- Cliff Shaffer for Ranjit Randhawa: UCHCpresentation.ppt: Composition in Modeling Macromolecular Regulatory Networks
- Lenov: ModularityInCore.pdf: Advocacy that modularity should be in core. SBML files: Main.xml charybde.xml scylla.xml. See also the page Modularity In Core
- Martin Ginkel: Object-Oriented Modeling in ProMoT (and other tools)
- Andrew Finney: model-composition-2007.ppt
- Mike Hucka: review-of-proposals-2007-09-08.pdf: Brief comparison of Finney & Ginkel proposals
- 2:00 pm - 3:00 pm: Lunch
- 3:00 pm - 6:00 pm: Breakout session
- 6:30 pm - ?: Dinner (for UCHC people: The Grist Mill Restaurant)
Documents produced the first day by the UCHC side:
Documents produced the first day by the EBI side:
Monday, September 10
- 8:00 am - 8:30 am: Coffee, video links, etc.
- 8:30 am - 10:30 pm: Live session
- 10:30 am - 10:45 am: Break
- 10:45 am - 2:00 pm: Live session
- 2:00 pm - 3:00 pm: Lunch