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libSBML-4.0.1
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We are pleased to announce the release of libSBML-4.0.1 which is
available for download from

https://sourceforge.net/projects/sbml/files/

NOTE: This is a BUG FIX release for people who wish to continue to
use a stable version of libSBML.

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The bug fixes include:

- [Tracker issue #2910508]
The install script for the matlab binding on Windows failed to
reflect the new directory name. This has been fixed.

- [Tracker issue #2895082]
Building matlab bindings failed due to a wrong build argument.
This has been fixed. Thanks to Javier for reporting this problem.

- [Tracker issue #2879118]
Attempting conversion on a document that had failed during the read
was reporting success. This has been fixed. Thanks to Lucian
Smith for reporting this.

- [Tracker issue #2878770]
The code that checked uniqueness of metaids was not checking all
of them. This has been fixed. Thanks to Frank Bergmann for
spotting this problem.

- [Tracker issue #2877180]
Added a readSBMLFromFile function as requested by Lucian Smith.

- [Tracker issue #2865288]
Removed C++ style comments in C code (in List.h and ListOf.h)
which can cause compilation errors.

- [Tracker issue #2859186]
The code that checks units cannot deal with an exponent that is
itself an expression. This has been made clearer.

- The ASTNode class had no assignment operator. This has been
added.

- MIRIAM annotations could not be properly cleared after
SBase::unsetCVTerms() function invoked. This has been fixed.
Thanks to Allyson Lister for spotting this problem.

- MIRIAM annotations could be wrongly updated when adding/removing
MIRIAM annotations. This has been fixed. Thanks to Allyson Lister
for spotting this problem.

- No errors were reported when reading an SBML file/string which
contains one or more default namespaces which are not schema
conformant. This has been fixed. Thanks to Camille Laibe for
reporting this problem.

- A mismatch in the argument names meant the
SBMLDocument_setConsistencyChecks and
SBMLDocument_setConsistencyChecksForConversion functions were not
being included in the library.

- The MATLAB binding code caused a crash when used with octave.
This has been fixed.

- The configure script failed in a test program for expat when
cross compiling detected. This has been fixed. Thanks to Lucian
Smith for reporting this.

- GCC's option "-Wno-long-double" has been removed on Snow Leopard
(Mac OS X 10.6) which caused some compilation errors. This has
been fixed. Thanks to Jacky Snoep for reporting this problem.

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Please report any problems you encounter using libSBML either to the
mailing list libsbml-team@caltech.edu or using the issue tracker
for libSBML at

https://sourceforge.net/tracker/?group_id=71971&atid=942737

Thanks

Sarah, Akiya & Mike
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[Updated on: 02 Feb '10 08:47] by Moderator