Forums

F.A.Q. F.A.Q.    Register Register    Login Login    Home Home
Search Search
SBML Discussions » sbml-interoperability » SBML test suite: Can I access the tags database?
Show: Today's Posts  :: Message Navigator
| Subscribe to topic 
Return to the default flat view Create a new topic Submit Reply
AuthorTopic
Robert Muetzelfeldt


Posts: 2
Location:
Edinburgh
Registered:
November 2005
SBML test suite: Can I access the tags database? 30 Apr '10 09:35 Go to previous message

Hello,

I'm developing a converter for SBML models into another format. For this project, I would like to be able to select models from the test suite which have certain features, rather than exclude models which have certain features. As far as I can see, the only mechanism for selecting test cases at the moment is the web interface available at http://sbml.org/test-suite/web/selecttests.jsp, which only allows me to exclude models by component tags or test tags. So, it's not possible to (for example) select just those models which have multiple compartments.

The simplest way of satisfying my requirement would be to have a spreadsheet listing all tags against all models. I guess that something like this exists already under the covers for the test-case selection facility. Would it be possible to make this available as (e.g.) a .csv file? Or is it already available somewhere that I've missed?

Thanks,
Robert Muetzelfeldt

      

SubjectPosterDate
Read Message   SBML test suite: Can I access the tags database?  Robert Muetzelfeldt30 Apr '10 09:35
Read Message   Re: SBML test suite: Can I access the tags databas... Sarah Keating01 May '10 07:34
Previous Topic:Validation of level 2, version 3 notes
Next Topic:libsbml on Mac OS X
Go to forum:
-=] Back to Top [=-

Powered by FUDforum. (Copyright Advanced Internet Designs Inc.)

Please use our issue tracking system for any questions or suggestions about this website.