libsbml-5.0.0 + Matlab bindings
08 May '11 03:29
I've installed libsbml-5.0.0 on a clean install of Ubuntu 11.04 (64bit).
I've used the CMake method as explained in
This went well, the documentation says to use 2.8.4, but the version I
used was 2.8.3. Compilation was able to run 'make -j 9' which compiles
in parallel, something that did not work with previous versions of
Enabling the Matlab bindings, as explained in
did not work. The documentation says that the bindings will have been
installed in /usr/local/lib (assuming you left the default values when
configuring and compiling), but this is not so. The matlab bindings are
installed in /usr/local/share/libsbml/bindings/matlab/ . The libsbml-4.*
series used to install the files in the correct location.
Not a problem because of libsbml, but affecting libsbml, is an error
with matlab on some systems with recent gcc, search for 'matlab version
`GLIBCXX_3.4.11' not found'. To overcome this, I start matlab with
"LD_PRELOAD=/lib/x86_64-linux-gnu/libc.so.6:/usr/lib/x86_64-linux-gnu/libstdc++.so.6 /opt/MATLAB/R2010b/bin/matlab -desktop"
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