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Hello Rischard,

Thank you for letting us know about duplicated id's, that will be rectified
in the next version.

As for the schema issue, you know that the normative spec allows output
elements in all orders. And that the SED-ML schema has already been
corrected in to reflect this. So this will be a good test for SED-ML tools
to see whether they implement the spec correctly :)

Cheers
Frank

> -----Original Message-----
> From: sbml-interoperability-bounces@caltech.edu [mailto:sbml-
> interoperability-bounces@caltech.edu] On Behalf Of Richard
> Sent: Tuesday, June 07, 2011 5:15 AM
> To: sbml-interoperability@caltech.edu
> Subject: Re: [sbml-interoperability] New version of SBML Test Suite
available
>
>
> Hello,
> That's great to have a new test suite - and good to see SED-ML being used
too!
>
> I had a quick look at the SED-ML files to make sure that the jlibsedml
library
> could read them in OK. Nearly all were fine, but for some I get the error
> messages indicating two elements have the same ID ( see below). In 954,
for
> example, a variable and a DataGenerator are both identified as 'P11',
which
> might confuse some SED-ML software, as identifiers are supposed to be
> globally unique.
>
> Also, on a slightly more pedantic note ( which will be addressed in the
next
> SEDML release), the l1v1 SEDML schema imposes an ordering on outputs
> (plot2D, plot3D, Report), that at least some of these examples don't
follow. This
> doesn't affect the meaning of the document at all, but any software that
uses
> the SED-ML schema to check documents might complain about a schema
> violation.
>
> Cheers
> Richard
>
> List of files with duplicated ID values
> ----------------------------
>
> 00954-sbml-l3v1-sedml.xml
> P11 for element [P11] defined already.
> P21 for element [P21] defined already.
> P31 for element [P31] defined already.
> 00955-sbml-l3v1-sedml.xml
> P11 for element [P11] defined already.
> P31 for element [P31] defined already.
> P41 for element [P41] defined already.
> 00956-sbml-l3v1-sedml.xml
> P11 for element [P11] defined already.
> P21 for element [P21] defined already.
> P31 for element [P31] defined already.
> 00957-sbml-l3v1-sedml.xml
> P11 for element [P11] defined already.
> 00958-sbml-l3v1-sedml.xml
> P11 for element [P11] defined already.
> 00959-sbml-l3v1-sedml.xml
> P11 for element [P11] defined already.
> P21 for element [P21] defined already.
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