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Jason Stevens


Posts: 3
Registered:
October 2011
Re: libsbml/jsbml model attribute mismatch 21 Feb '12 10:12 Go to previous message

Great; thanks for the help.

On Tue, Feb 21, 2012 at 4:23 AM, Nicolas Rodriguez <rodrigue@ebi.ac.uk>wrote:

> Le 21/02/2012 09:53, Nicolas Rodriguez a écrit :
> > Le 20/02/2012 23:26, Jason Stevens a écrit :
> >> This may be intentional, but JSBML seems to append "ID" after model
> >> attributes (specifically, substanceUnits). In libSBML, the
> substanceUnits
> >> attribute is just "substanceUnits" (it's this way in the spec as well),
> but
> >> when a file is read and printed using JSBML, this attribute becomes
> >> "substanceUnitsID". Is this an error, and, if not, is there a way to
> avoid
> >> this happening?
> > This is most probably an error, although I never noticed it.
> >
> > Which version of jsbml are you using ?
> >
> > You are speaking of the SBML level 3 model attributes here ?
>
> After a quick check, it was indeed a bug where the xml attribute was not
> written properly.
>
> I have fixed it in the trunk and will merge the fix to the 0.8 branch
> later.
>
> Thanks,
> Nico
>
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SubjectPosterDate
Read Message   libsbml/jsbml model attribute mismatch Jason Stevens20 Feb '12 15:26
Read Message   Re: libsbml/jsbml model attribute mismatch rodrigue21 Feb '12 01:53
Read Message   Re: libsbml/jsbml model attribute mismatch rodrigue21 Feb '12 03:23
Read Message   Re: libsbml/jsbml model attribute mismatch  Jason Stevens21 Feb '12 10:12
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