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Arnaud LEGENDRE


Posts: 1
Registered:
June 2012
Issues installing libsbml java binding 01 Jun '12 09:32 Go to previous message

Hello,

i am not sure to post in the right list, but feel free to redirect me...

I have issues making the binding of libsbml with Java work, both under
windows7 64 and ubuntu12.04 64

> On windows, i have installed from the regular installer, checking the
option for the java binding. The libraries are hence stored in
C:\Program Files\SBML\libSBML-5.5.0-libxml2-x64

I have Java runtime v1.7.0_003, and javac 1.7.0_03

i configured my environment variables (system ones) with :

Path = <otherstuff>;C:\Program Files\SBML\libSBML-5.5.0-libxml2-x64\lib
CLASSPATH = <otherstuff>;C:\Program
Files\SBML\libSBML-5.5.0-libxml2-x64\bindings\java\libsbmlj.jar

my program, that properly worked on former machines keeps returning:

import org.sbml.libsbml.*;

Error: could not link with the libSBML library. It is likely
your LD_LIBRARY_PATH environment variable does not include
the directory containing the libsbml library file.
Java Result: 1

> On ubuntu, i tried to install both from the .deb package and
re-compilation of sources (with-xerces and with-java):

java version "1.6.0_24"
OpenJDK Runtime Environment (IcedTea6 1.11.1) (6b24-1.11.1-4ubuntu3)
OpenJDK 64-Bit Server VM (build 20.0-b12, mixed mode)

in my .bashrc file

#PATH FOR LIBSBML
export
LD_LIBRARY_PATH=$LD_LIBRARY_PATH:/usr/lib:/usr/lib32:/usr/lib64:/usr/local/lib:/usr/share/java:/usr/share:/usr/share/java/:/usr/local/share/java
export
CLASSPATH=$CLASSPATH:/usr/share/java/:/usr/lib:/usr/lib32:/usr/lib64:/usr/local/lib:/usr/share/java:/usr/share:/usr/share/java/:/usr/local/share/java

i tried with versions 86 and 64 of libsbml, and restarted a couple of
times, but with no success ...

I'd be greatfull if you gave me some ideas !
regards,
Arnaud

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SubjectPosterDate
Read Message   Issues installing libsbml java binding  Arnaud LEGENDRE01 Jun '12 09:32
Read Message   Re: Issues installing libsbml java binding fbergman04 Jun '12 05:00
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