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Mike Hucka


Posts: 961
Registered:
October 2003
Re: Libsbml Python bindings for Mac OSX 28 Jun '07 18:43 Go to previous message

>>>>> On 22 Jun 2007, floettmann <max.floettmann@gmail.com> wrote:
f> Hello Akiya, Now that I installed the python bindings
f> sucessfully I'm making changes to my code to solve
f> problems with the new features of libSBML 3.0. I'm a
f> bit confused by the new annotation features and XMLNode
f> Classes. Is there a documentation for the python
f> bindings like the one for version
f> 2.4.3(http://www.sbml.org/software/libsbml/docs/python/)?
f> Thanks,

Hello,

We've been working on libSBML 3.0 and it's very close to
being released. In addition to the pydoc-based
documentation that Akiya posted here recently, we've been
working on using Doxygen to produce more comprehensive
documentation. A preliminary version of this is now
available here:

http://sbml.org/software/libsbml3/

C++ is the most accurate and complete, with Java and Python
being reasonably complete.

The docs are generated from the C++ source, so there is a
tendency to be C++ centric in the details. We'll try to
improve that in the future. Also, there is unfortunately
still not enough tutorial-type information. We'll try to
expand on that as much as possible when we can.

We would really welcome people's comments on this now. We
haven't had enough proof readers, and I *know* there are
bugs in the docs. So if everyone could look at the new docs
and not hesitate reporting problems, it would help improve
libSBML.

MH

--
Mike Hucka, Ph.D. mhucka@caltech.edu http://bnmc.caltech.edu
Senior Research Fellow, Control and Dynamical Systems
Co-director, Biological Network Modeling Center (BNMC)
Beckman Institute @ the California Institute of Technology

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SubjectPosterDate
Read Message   libSBML prerelease Sarah Keating05 Jun '07 06:40
Read Message   Updated SBML-shorthand Darren J Wilkinson08 Jun '07 08:00
Read Message   Libsbml Python bindings for Mac OSX Duncan Hull11 Jun '07 03:26
Read Message   Re: Libsbml Python bindings for Mac OSX Akiya Jouraku11 Jun '07 09:37
Read Message   Re: Libsbml Python bindings for Mac OSX Colin Gillespie12 Jun '07 01:30
Read Message   Re: Libsbml Python bindings for Mac OSX Akiya Jouraku18 Jun '07 05:12
Read Message   Re: Libsbml Python bindings for Mac OSX Akiya Jouraku18 Jun '07 04:47
Read Message   Libsbml Python bindings for Mac OSX Duncan Hull18 Jun '07 05:13
Read Message   Re: Libsbml Python bindings for Mac OSX Akiya Jouraku18 Jun '07 09:55
Read Message   Libsbml Python bindings for Mac OSX Duncan Hull19 Jun '07 07:38
Read Message   Re: Libsbml Python bindings for Mac OSX Akiya Jouraku19 Jun '07 12:18
Read Message   Libsbml Python bindings for Mac OSX Duncan Hull20 Jun '07 09:07
Read Message   Re: Libsbml Python bindings for Mac OSX Akiya Jouraku21 Jun '07 01:41
Read Message   Re: Libsbml Python bindings for Mac OSX Max Flöttmann21 Jun '07 06:49
Read Message   Re: Libsbml Python bindings for Mac OSX Akiya Jouraku21 Jun '07 12:49
Read Message   Re: Libsbml Python bindings for Mac OSX Max Flöttmann22 Jun '07 02:38
Read Message   Re: Libsbml Python bindings for Mac OSX Akiya Jouraku25 Jun '07 13:37
Read Message   Re: Libsbml Python bindings for Mac OSX  Mike Hucka28 Jun '07 18:43
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