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Jordan Atlas


Posts: 53
Registered:
April 2005
Re: SBML survey: should consistency ofunitsbe required? 16 Dec '07 10:23 Go to previous messageGo to previous message

Dear Sven and all,

Quote:

On the other hand I think the main benefit of units is that if units are known we can write tools that convert units, which is _needed_ for model merging. And this is only really possible if the units are correct. (And correct units are possible even for all these difficult cases involving mass units).


I don't know the background for the model merging efforts, but do all models need to be "mergable"? If not, then requiring units be consistent (in ALL models) so that models can be merged seems unnecessary.

Quote:

If we do not require this (SHOULD) we should add a flag to the model to indicate if the units are to be considered consistent, so that a tool can know if operations working with units are possible. (This is necessary because
there are cases when a tool cannot find out if the units are
consistent or not)


If there are cases when a tool cannot find out if the units are consistent, then how is it possible to enforce consistency (i.e. SHOULD)?

Cheers,

--Jordan


      

SubjectPosterDate
Read Message   SBML survey: should consistency of units be requir... Mike Hucka14 Dec '07 19:06
Read Message   Re: SBML survey: should consistency of units be re... Sven Sahle15 Dec '07 12:48
Read Message   Re: SBML survey: should consistency of units be re... Nicolas Le Novere15 Dec '07 16:03
Read Message   Re: SBML survey: should consistency of units be re... Nicolas Le Novere15 Dec '07 16:03
Read Message   Re: SBML survey: should consistency of units be re... Sarah Keating16 Dec '07 09:59
Read Message   Re: SBML survey: should consistency of units be re... hugh.d.spence15 Dec '07 13:12
Read Message   Re: SBML survey: should consistency of units be re... Nicolas Le Novere15 Dec '07 16:07
Read Message   Re: SBML survey: should consistency of units be re... hugh.d.spence15 Dec '07 23:42
Read Message   Re: SBML survey: should consistency of units be re... Schaff16 Dec '07 06:13
Read Message   Re: SBML survey: should consistency of units be re... Robert Phair16 Dec '07 13:06
Read Message   Re: SBML survey: should consistency of units be re... Sven Sahle16 Dec '07 14:23
Read Message   Re: SBML survey: should consistency of units be re... hugh.d.spence17 Dec '07 03:42
Read Message   Re: SBML survey: should consistency of units be re... Robert Phair15 Dec '07 15:06
Read Message   Re: SBML survey: should consistency of units be re... Nicolas Le Novere15 Dec '07 16:14
Read Message   Re: SBML survey: should consistency of unitsbe req... Robert Phair15 Dec '07 16:59
Read Message   Re: SBML survey: should consistency ofunitsbe requ... Schaff15 Dec '07 22:02
Read Message   Re: SBML survey: should consistency ofunitsbe requ... Sven Sahle16 Dec '07 06:03
Read Message   Re: SBML survey: should consistency ofunitsbe requ...  Jordan Atlas16 Dec '07 10:23
Read Message   Re: SBML survey: should consistency ofunitsbe requ... Jordan Atlas16 Dec '07 11:46
Read Message   Re: SBML survey: should consistency ofunitsbe requ... Sven Sahle16 Dec '07 14:06
Read Message   Re: SBML survey: should consistency ofunitsbe requ... Frank Bergmann16 Dec '07 14:36
Read Message   Re: SBML survey: should consistency ofunitsbe requ... Stefan.Hoops17 Dec '07 14:11
Read Message   Re: SBML survey: should consistency ofunitsbe requ... Nicolas Le Novere17 Dec '07 14:39
Read Message   Re: SBML survey: should consistency ofunitsbe requ... Stefan.Hoops17 Dec '07 15:06
Read Message   Re: SBML survey: should consistency of units be re... Pedro Mendes18 Dec '07 01:05
Read Message   Re: SBML survey: should consistency ofunitsbe requ... Nicolas Le Novere16 Dec '07 15:17
Read Message   Re: SBML survey: should consistency ofunitsbe requ... Schaff15 Dec '07 22:09
Read Message   Re: SBML survey: should consistency of units be re... Sven Sahle16 Dec '07 14:39
Read Message   Results of survey: should consistency of units be ... Mike Hucka01 Jan '08 19:18
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