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Posts: 8
Registered: March 2009
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Re: problem with SBML events
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07 May '09 10:59

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Hi, I guess you want something like this in your model:
<parameter id="kinetic_constant" value="0"/>
<parameter id="value2" value="10"/>
<listOfEvents>
<event name="my_event">
<trigger>
<math xmlns="http://www.w3.org/1998/Math/MathML">
<apply>
<eq/>
<ci> time </ci>
<cn type="integer"> 12 </cn>
</apply>
</math>
</trigger>
<delay>
<math xmlns="http://www.w3.org/1998/Math/MathML">
<cn type="integer"> 0 </cn>
</math>
</delay>
<listOfEventAssignments>
<eventAssignment variable="kinetic_constant">
<math xmlns="http://www.w3.org/1998/Math/MathML">
<ci> value2 </ci>
</math>
</eventAssignment>
</listOfEventAssignments>
</event>
</listOfEvents>
The kinetic_constant would have the value of 0 until time 12, then it is
set to 10.
Hope this helps...
Greetings,
Hannes
On Thu, 2009-05-07 at 10:12 -0700, Luca Freschi wrote:
> I have a chemical reaction:
> e.g. : a => b
> with one parameter:
> kinetic_constant=value_1
>
> I want to describe an event like this:
> at a defined time (e.g. t=12 s): kinetic_constant=value_2
>
> Is it possible to describe events like this with SBML?
>
> Thank you!
>
> I'm sorry if the question is stupid, but I'm a newbie here!
>
> :blush:
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