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AuthorTopic
rodrigue


Posts: 307
Location:
Cambridge UK
Registered:
February 2005
Re: If there were a pure Java libSBML ... 20 May '09 02:23 Go to previous messageGo to previous message

Michael Hucka wrote:
> Let me ask a different question. If we don't go the route
> of implementing a pure java version, are there things that
> we can do with the current scheme to reduce implementation
> and portability headaches for people?
>
> Maybe some of the problems are things that we can fix by
> taking a hard look at the current code base, and improving
> that. If we can address even 50% of the problems, it sounds
> like that would be a significant help (roughly X * 50% fewer
> headaches in the world, where X is the number of people
> trying to deploy Java-based apps with libSBML).
>
>
One of the big, big, problem that force us to not use libsbml most of
the time for biomodels DB is crash of our tomcats during call to libsbml
functions.
And the problems is not necessary coming from libsbml but may be from
JNI or swig.

We have also some systems that are in general not supported, like osf,
solaris, old linux distrib but have a working JVM.

Nico

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SubjectPosterDate
Read Message   If there were a pure Java libSBML ... Mike Hucka18 May '09 13:18
Read Message   Re: If there were a pure Java libSBML ... Neil Swainston18 May '09 13:32
Read Message   Re: If there were a pure Java libSBML ... curoli18 May '09 13:59
Read Message   Re: If there were a pure Java libSBML ... Mike Hucka18 May '09 15:13
Read Message   Re: If there were a pure Java libSBML ... curoli18 May '09 16:25
Read Message   Re: If there were a pure Java libSBML ... Neil Swainston19 May '09 03:01
Read Message   Re: If there were a pure Java libSBML ... curoli19 May '09 10:10
Read Message   Re: If there were a pure Java libSBML ... Mike Hucka19 May '09 10:44
Read Message   Re: If there were a pure Java libSBML ... curoli19 May '09 14:04
Read Message   Re: If there were a pure Java libSBML ... Neil Swainston19 May '09 12:48
Read Message   Re: If there were a pure Java libSBML ... Mike Hucka18 May '09 15:08
Read Message   Re: If there were a pure Java libSBML ... Neil Swainston19 May '09 02:25
Read Message   Re: If there were a pure Java libSBML ... Lucian Smith18 May '09 14:11
Read Message   Re: If there were a pure Java libSBML ... Mike Hucka19 May '09 10:53
Read Message   Re: If there were a pure Java libSBML ... Frank Bergmann18 May '09 14:12
Read Message   Re: If there were a pure Java libSBML ... Stefan.Hoops19 May '09 07:55
Read Message   Re: If there were a pure Java libSBML ... curoli19 May '09 10:31
Read Message   Re: If there were a pure Java libSBML ... Mike Hucka19 May '09 10:50
Read Message   Re: If there were a pure Java libSBML ...  rodrigue20 May '09 02:23
Read Message   Re: If there were a pure Java libSBML ... rodrigue20 May '09 01:47
Read Message   Re: If there were a pure Java libSBML ... Stefan.Hoops20 May '09 11:57
Read Message   Re: If there were a pure Java libSBML ... Mike Hucka20 May '09 12:35
Read Message   Re: If there were a pure Java libSBML ... Stefan.Hoops20 May '09 13:59
Read Message   Re: If there were a pure Java libSBML ... rodrigue21 May '09 03:23
Read Message   Re: If there were a pure Java libSBML ... Mike Hucka21 May '09 11:32
Read Message   Re: If there were a pure Java libSBML ... curoli23 May '09 08:40
Read Message   Re: If there were a pure Java libSBML ... Neil Swainston24 May '09 04:52
Read Message   Re: Java@EBI rodrigue21 May '09 02:07
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