Forums

F.A.Q. F.A.Q.    Register Register    Login Login    Home Home
Search Search
SBML Discussions » sbml-interoperability » SBML.py cannot be opened?
Show: Today's Posts  :: Message Navigator
| Subscribe to topic 
Return to the default flat view Create a new topic Submit Reply
AuthorTopic
Diego Pardilla


Posts: 1
Registered:
January 2010
Re: SBML.py cannot be opened? 29 Jan '10 03:57 Go to previous messageGo to previous message

I install libsbml-4.0.0, in a Debian squeeze. Try the following:

"ldconfig -v | grep sbml"

And find this line:

"libsbml.so.4 -> libsbml.so.4.0.0"

and if you have it is that you have properly installed the libSBML. Be
carefull with the version, look at this website:
http://synbioss.sourceforge.net/releases/20080910/101-is-up, I with
libSBML 4.0, and the Debian Squezee packages, I worked the last version
of SynbioSS.

Good luck and sorry for me English, Diego.


ajdecker1022 wrote:
> Hello, everyone!
>
> I hope you can bear with me, as I am an absolute beginner with this! So I just tried to install SynBioSS (Synthetic Biology Software Suite) from synbioss.sourceforge.net from the source code. I'm using Ubuntu Linux 9.10 (which I am completely new to as well :-s) However, when attempting to run the synbioss.py script (the main one) I get an error that SBML.py cannot be opened. Then, after I click ok, it complains about a syntax error: The file sbml.py contains the syntax error invalid syntax at line 530, character 45. I'm guessing this is because I did not properly link the SBML software. I know the documentation is online, but I am confused as to how to properly use ldconfig, and I found the manual to be unhelpful.
>
> Am I likely correct in thinking that the problem has to do with no proper linking? Can anyone lend a hand?
>
> Thanks!
>
> Andrew
> ____________________________________________________________
> To manage your sbml-interoperability list subscription, visit
> https://utils.its.caltech.edu/mailman/listinfo/sbml-interoperability
>
> For a web interface to the sbml-interoperability mailing list, visit
> http://sbml.org/Forums/
>
> For questions or feedback about the sbml-interoperability list,
> contact sbml-team@caltech.edu
>
____________________________________________________________
To manage your sbml-interoperability list subscription, visit
https://utils.its.caltech.edu/mailman/listinfo/sbml-interoperability

For a web interface to the sbml-interoperability mailing list, visit
http://sbml.org/Forums/

For questions or feedback about the sbml-interoperability list,
contact sbml-team@caltech.edu

      

SubjectPosterDate
Read Message   SBML.py cannot be opened? ajdecker102227 Jan '10 17:24
Read Message   Re: SBML.py cannot be opened? Mike Hucka28 Jan '10 23:58
Read Message   Re: SBML.py cannot be opened?  Diego Pardilla29 Jan '10 03:57
Read Message   Re: SBML.py cannot be opened? ajdecker102229 Jan '10 10:02
Previous Topic:unsetCharge
Next Topic:Release of SBMLToolbox-3.1.0
Go to forum:
-=] Back to Top [=-

Powered by FUDforum. (Copyright Advanced Internet Designs Inc.)

Please use our issue tracking system for any questions or suggestions about this website.