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Jordan Atlas


Posts: 53
Registered:
April 2005
AST_NAME_TIME from libsbml.parseFormula 04 Mar '10 07:46 Go to previous message

Dear Forum,

What is the proper way to enter a formula that references "time" (i.e. the model simulation time) into libSBML's "parseFormula" function?

When I call libsbml.parseFormula('time') in python the resulting AST has type AST_NAME rather than AST_NAME_TIME. This is causing an error in the resulting SBML validation because the name 'time' is not recognized as a species/reaction/parameter/etc.

I am using libSBML-4.0.0-xerces-vc90 from Python on Windows XP.

There is a similar problem posted here, but I don't see any follow up.

Thanks for your help.

--Jordan Atlas

      

SubjectPosterDate
Read Message   AST_NAME_TIME from libsbml.parseFormula  Jordan Atlas04 Mar '10 07:46
Read Message   Re: AST_NAME_TIME from libsbml.parseFormula Sarah Keating04 Mar '10 23:41
Read Message   Re: AST_NAME_TIME from libsbml.parseFormula Darren J Wilkinson05 Mar '10 02:08
Read Message   Re: AST_NAME_TIME from libsbml.parseFormula Jordan Atlas05 Mar '10 06:21
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