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On Sep 20, 2010, at 8:17 AM, Falko Krause wrote:

> I want to get the mathML code of math objects, however the toSBML function
> is missing in math objects. Would be nice to have it.
>
> In [1]: import libsbml
>
> In [2]: doc = libsbml.readSBML('./BIOMD0000000232.xml')
>
> In [3]: model = doc.getModel()
>
> In [4]: r = list(model.getListOfReactions())[0]
>
> In [5]: klaw = r.getKineticLaw()
>
> In [6]: math = klaw.getMath()
>
> In [7]: math.to<tab>
> :(
>
>

I can only speculate, that the math element would not have a 'toSBML' function, as it is not SBML as such but rather MathML. Nevertheless the functionality you seek is available via methods on the libsbml object, you could try:

libsbml.writeMathMLToString(math)

in the above, that should yield the result you want,

best
Frank

>
> --
> ************************************************
> * Falko Krause
> * Humboldt-Universität zu Berlin
> * Theoretical Biophysics Group
> * falko.krause@staff.hu-berlin.de
> * +49 30 2093 8592
> * skype: siphone
> ************************************************
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