Forums

F.A.Q. F.A.Q.    Register Register    Login Login    Home Home
Search Search
SBML Discussions » sbml-discuss » SBML L2v2 specification vote #7: Making 'math' optional in KineticLaw
Show: Today's Posts  :: Message Navigator
| Subscribe to topic 
Return to the default flat view Create a new topic Submit Reply
AuthorTopic
Henning Schmidt


Posts: 23
Registered:
November 2005
RE: SBML L2v2 specification vote #7: Making 'math' optional in KineticLaw 18 Jan '06 00:28 Go to previous messageGo to previous message

Hello,

I totally agree with Stefan and think his suggestion

> To overcome the current
> restrictions I would suggest kinetic laws for different kind of
> modelling, i.e. subtyping. This would also allow two supposedly similar
> models to be expressed in one SBML file, e.g. a stochastic model and an
> ODE model. Results could than easily obtained from two different types
> of integration. I am definitely opposed to removing the contents from
> the SBML and putting it in the annotation like the sboTerm. The model
> must be interpretable without it the annotation (sboTerm) provides the
> context.

should be a third option of choice in the #7 vote.

/Henning


      

SubjectPosterDate
Read Message   SBML L2v2 specification vote #7: Making 'math' opt... Mike Hucka13 Jan '06 16:15
Read Message   Re: SBML L2v2 specification vote #7: Making 'math'... Stefan Hoops16 Jan '06 09:06
Read Message   Re: SBML L2v2 specification vote #7: Making 'math'... Nicolas Le Novere16 Jan '06 11:57
Read Message   Re: SBML L2v2 specification vote #7: Making 'math'... Stefan Hoops17 Jan '06 06:29
Read Message   Re: SBML L2v2 specification vote #7: Making 'math'... Nicolas Le Novere17 Jan '06 09:04
Read Message   Re: SBML L2v2 specification vote #7: Making 'math'... Stefan Hoops18 Jan '06 07:21
Read Message   Re: SBML L2v2 specification vote #7: Making 'math'... Nicolas Le Novere18 Jan '06 13:22
Read Message   Re: SBML L2v2 specification vote #7: Making 'math'... Stefan Hoops19 Jan '06 07:03
Read Message   Re: SBML L2v2 specification vote #7: Making 'math'... Darren J Wilkinson19 Jan '06 13:28
Read Message   RE: SBML L2v2 specification vote #7: Making 'math'...  Henning Schmidt18 Jan '06 00:28
Read Message   Re: SBML L2v2 specification vote #7: Making 'math'... Mike Hucka26 Jan '06 21:02
Read Message   Re: SBML L2v2 specification vote #7: Making 'math'... Stefan Hoops27 Jan '06 04:58
Read Message   Re: SBML L2v2 specification vote #7: Making 'math'... Mike Hucka27 Jan '06 17:19
Read Message   Re: SBML L2v2 specification vote #7: Making 'math'... Stefan Hoops30 Jan '06 05:18
Read Message   Re: SBML L2v2 specification vote #7: Making 'math'... Mike Hucka30 Jan '06 13:49
Read Message   Re: SBML L2v2 specification vote #7: Making 'math... Mike Hucka18 Jan '06 22:47
Read Message   RE: SBML L2v2 specification vote #7: Making 'math'... Herbert Sauro23 Jan '06 15:35
Read Message   RE: SBML L2v2 specification vote #7: Making 'math'... tg23 Jan '06 16:05
Read Message   RE: SBML L2v2 specification vote #7: Making 'math'... Mike Hucka25 Jan '06 18:18
Read Message   Re: SBML L2v2 specification vote #7: Making 'math'... jrohwer24 Jan '06 00:07
Read Message   RE: SBML L2v2 specification vote #7: Making 'math'... Nicolas Le Novere24 Jan '06 01:07
Read Message   Re: SBML L2v2 specification vote #7: Making 'math'... Pedro Mendes24 Jan '06 05:59
Read Message   RE: SBML L2v2 specification vote #7: Making 'math'... Mike Hucka25 Jan '06 18:01
Read Message   RE: SBML L2v2 specification vote #7: Making 'math'... Herbert Sauro24 Jan '06 12:34
Read Message   Re: SBML L2v2 specification vote #7: Making 'math'... Pedro Mendes24 Jan '06 13:14
Read Message   RE: SBML L2v2 specification vote #7: Making 'math'... Herbert Sauro24 Jan '06 17:28
Read Message   Re: SBML L2v2 specification vote #7: Making 'math'... Pedro Mendes24 Jan '06 18:27
Read Message   RE: SBML L2v2 specification vote #7: Making 'math'... Herbert Sauro25 Jan '06 10:54
Read Message   Results of L2v2 specification vote #7 Mike Hucka30 Jan '06 13:48
Previous Topic:Fourth release of BioModels Database
Next Topic:SBliD (SBML like Database) release
Go to forum:
-=] Back to Top [=-

Powered by FUDforum. (Copyright Advanced Internet Designs Inc.)

Please use our issue tracking system for any questions or suggestions about this website.