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Hi,
> Another issue that I've been thinking about is: what is the best way to store
> multiple values for the same kinetic rate constants. The reason I want to do
> this is that I have tables that list a set of kinetics for reactions from
> several groups that may not agree. I would like to store all these values
> within my sbml so that my tools can try to enumerate which kinetics seem to
> be the most consistent. I could do this within an annotation, but it seems
> as though it could be an issue that could more generally useful to the sbml
> community.
What I have been doing is to first create a template SBML file and then
generate SBML files with various values for a rate constant.
I include something like:
<parameter id="k_prod3" value="@k_prod3@"/>
in the template and then use the copy task in ant to generate various SBML
files.

hope this helps,

hiro