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Annotations

SBML Level 3 Package Activity Status Page

Package name: Annotations
Package label: annot
Package purpose: Support for richer annotation syntax than the regular annotations in SBML Level 3 Core.
Package Working Group mailing list: sbml-annot

Contact address (where to ask questions): sbml-annot@lists.sourceforge.net
Specification status: Retired (no more work is planned).
Latest specification document: None is available yet

SBML Editor acting as liason: Nicolas Le Novère
This table is generated automatically from the data for annot in the SBML Level 3 Package Status spreadsheet.

Status of specification and/or proposal development

A workshop about the Annotations package was held in 2010. The workshop event page has more information as well as materials from that workshop.

Status of LibSBML support

LibSBML implementation status: Implementation work has not yet started.
Where can you find a distribution?: No distribution is available at this time

Support for an SBML Level 3 package in libSBML is realized as a compile-time, plug-in extension. This table summarizes the status of the libSBML support for annot. Source code for any given libSBML extension (if one has been developed) is available from the libsbml-packages branch of the SBML project SVN repository on SourceForge.

Status of JSBML support

JSBML implementation status: Implementation work has not yet started.
Where can you find a distribution?: No distribution is available at this time

Where can you find in-progress source code?: Not yet available

Support for an SBML Level 3 package in JSBML is realized as a dynamically-loadable Java package. This table summarizes the status of the JSBML support for annot. Source code for any given JSBML extension (if one has been developed) is available from the extensions portion of the JSBML project on GitHub.

Status of RELAX NG schemas

RELAX NG schema status: No schema is available at this time.
Link to schema: None released yet

The RELAX NG (RNG) schemas are basic schemas for validating SBML Level 3 in any RNG schema processor. More information about the use of these RNG schemas for SBML is available in a separate page.

Status of third-party application support

3rd-party software implementation status: No applications are known to support this yet.
This table summarizes, in a general sense, the state of support for the annot package in software applications. Implementation of support for a Level 3 package in applications is an important criterion for approving a package specification according to the SBML Development Process.

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This page was last modified 23:05, 20 July 2012.



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