Software

The SBML project develops and makes available a number of software resources in addition to the SBML.org portal. Here is a list of our current supported software. You may find out more about them by clicking their titles.

LibSBML

A free, open-source API library for working with SBML content. It supports many programming languages and operating systems.

MathSBML

A free, open-source package for working with SBML in Mathematica. It supports reading, writing, manipulating, and simulating SBML models.
 

SBMLToolbox

A free, open-source package for working with SBML in MATLAB. It provides functions for reading, writing, manipulating, and simulating SBML models.

SBML Test Suite

A conformance testing suite for assessing a simulator's support for various SBML features. (Only the online version is currently available; you can also download the test cases by themselves.)
 

KEGG2SBML

A program to convert KEGG (Kyoto Encyclopedia of Genes and Genomes) Pathway database files to SBML using the KEGG LIGAND database.

BioModels DB converters

The BioModels Database group provides several converters, to and from CellML, to XPP, BioPAX. SciLab, and dot (graphviz).
 

SBMLeditor

A portable (written in Java), low-level, tree-structured editor for SBML. It supports annotations and validation.

Retrieved from "http://sbml.org/Software"

This page was last modified 20:33, 19 April 2009.



Please use our issue tracking system for any questions or suggestions about this website. This page was last modified 20:33, 19 April 2009.