File Name:MAPK.xml SBML Level 2 Version 1
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Model Name: MAPK with feedback [Kholodenko,2000] Model id: MAPK
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Compartments
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| ID |
Name |
Dimension |
Size |
Units |
Derived Units |
Outside |
Constant |
| uVol |
uVol |
3 |
... |
volume |
volume |
... |
True |
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Species
|
| ID |
Name |
Compartment |
Type |
I.C. |
Units |
Derived Units |
B.C |
Constant |
Charge |
| KKK |
KKK |
uVol |
amount |
90. |
substance |
substance |
False |
False |
... |
| KKKp |
KKKp |
uVol |
amount |
10. |
substance |
substance |
False |
False |
... |
| KK |
KK |
uVol |
amount |
280. |
substance |
substance |
False |
False |
... |
| KKp |
KKp |
uVol |
amount |
10. |
substance |
substance |
False |
False |
... |
| KKpp |
KKpp |
uVol |
amount |
10. |
substance |
substance |
False |
False |
... |
| K |
K |
uVol |
amount |
280. |
substance |
substance |
False |
False |
... |
| Kp |
Kp |
uVol |
amount |
10. |
substance |
substance |
False |
False |
... |
| Kpp |
Kpp |
uVol |
amount |
10. |
substance |
substance |
False |
False |
... |
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Reactions, global and local contexts suppressed
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| ID |
Name |
Fast |
Reaction |
Modifiers |
Parameters |
Formula |
Contribution to ODEs |
| reaction1 |
reaction1 |
False |
KKK -> KKKp |
Kpp |
V1->2.5, Ki->10., n->1., K1->10. |
(2.5*KKK)/((10. + KKK)*(1 + 0.1*Kpp^1.)) |
KKKp'=(2.5*KKK)/((10. + KKK)*(1 + 0.1*Kpp^1.)), KKK'=(-2.5*KKK)/((10. + KKK)*(1 + 0.1*Kpp^1.)) |
| reaction2 |
reaction2 |
False |
KKKp -> KKK |
... |
V2->0.25, KK2->8. |
(0.25*KKKp)/(8. + KKKp) |
KKK'=(0.25*KKKp)/(8. + KKKp), KKKp'=(-0.25*KKKp)/(8. + KKKp) |
| reaction3 |
reaction3 |
False |
KK -> KKp |
KKKp |
k3->0.025, KK3->15. |
(0.025*KK*KKKp)/(15. + KK) |
KKp'=(0.025*KK*KKKp)/(15. + KK), KK'=(-0.025*KK*KKKp)/(15. + KK) |
| reaction4 |
reaction4 |
False |
KKp -> KKpp |
KKKp |
k4->0.025, KK4->15. |
(0.025*KKKp*KKp)/(15. + KKp) |
KKpp'=(0.025*KKKp*KKp)/(15. + KKp), KKp'=(-0.025*KKKp*KKp)/(15. + KKp) |
| reaction5 |
reaction5 |
False |
KKpp -> KKp |
... |
V5->0.75, KK5->15. |
(0.75*KKpp)/(15. + KKpp) |
KKp'=(0.75*KKpp)/(15. + KKpp), KKpp'=(-0.75*KKpp)/(15. + KKpp) |
| reaction6 |
reaction6 |
False |
KKp -> KK |
... |
V6->0.75, KK6->15. |
(0.75*KKp)/(15. + KKp) |
KK'=(0.75*KKp)/(15. + KKp), KKp'=(-0.75*KKp)/(15. + KKp) |
| reaction7 |
reaction7 |
False |
K -> Kp |
KKpp |
k7->0.025, KK7->15. |
(0.025*K*KKpp)/(15. + K) |
Kp'=(0.025*K*KKpp)/(15. + K), K'=(-0.025*K*KKpp)/(15. + K) |
| reaction8 |
reaction8 |
False |
Kp -> Kpp |
KKpp |
k8->0.025, KK8->15. |
(0.025*KKpp*Kp)/(15. + Kp) |
Kpp'=(0.025*KKpp*Kp)/(15. + Kp), Kp'=(-0.025*KKpp*Kp)/(15. + Kp) |
| reaction9 |
reaction9 |
False |
Kpp -> Kp |
... |
V9->0.5, KK9->15. |
(0.5*Kpp)/(15. + Kpp) |
Kp'=(0.5*Kpp)/(15. + Kpp), Kpp'=(-0.5*Kpp)/(15. + Kpp) |
| reaction10 |
reaction10 |
False |
Kp -> K |
... |
V10->0.5, KK10->15. |
(0.5*Kp)/(15. + Kp) |
K'=(0.5*Kp)/(15. + Kp), Kp'=(-0.5*Kp)/(15. + Kp) |
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Differential Equations, global context suppressed
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| Variable |
ODEs |
| K |
K'=(-0.025*K*KKpp)/(15. + K) + (0.5*Kp)/(15. + Kp) |
| KK |
KK'=(-0.025*KK*KKKp)/(15. + KK) + (0.75*KKp)/(15. + KKp) |
| KKK |
KKK'=(0.25*KKKp)/(8. + KKKp) - (2.5*KKK)/((10. + KKK)*(1 + 0.1*Kpp^1.)) |
| KKKp |
KKKp'=(-0.25*KKKp)/(8. + KKKp) + (2.5*KKK)/((10. + KKK)*(1 + 0.1*Kpp^1.)) |
| KKp |
KKp'=(0.025*KK*KKKp)/(15. + KK) - (0.75*KKp)/(15. + KKp) - (0.025*KKKp*KKp)/(15. + KKp) + (0.75*KKpp)/(15. + KKpp) |
| KKpp |
KKpp'=(0.025*KKKp*KKp)/(15. + KKp) - (0.75*KKpp)/(15. + KKpp) |
| Kp |
Kp'=(0.025*K*KKpp)/(15. + K) - (0.5*Kp)/(15. + Kp) - (0.025*KKpp*Kp)/(15. + Kp) + (0.5*Kpp)/(15. + Kpp) |
| Kpp |
Kpp'=(0.025*KKpp*Kp)/(15. + Kp) - (0.5*Kpp)/(15. + Kpp) |
Generated by jamestkirk with MathSBML 2.2.1-beta-17 (25-Feb-2004) on Slartibartifast at 27-February-2004 20:14:35.044155 using PowerPC/PowerMac/MacOSX |