File Name:MO.xml SBML Level 2 Version 1
|
Model Name: Mitotic Oscillator with Events [Tyson 1991] Model id: MO
|
|
Compartments
|
| ID |
Name |
Dimension |
Size |
Units |
Derived Units |
Outside |
Constant |
| Compartment1 |
Compartment1 |
3 |
... |
volume |
volume |
... |
True |
|
Species
|
| ID |
Name |
Compartment |
Type |
I.C. |
Units |
Derived Units |
B.C |
Constant |
Charge |
| u |
u |
Compartment1 |
amount |
0 |
substance |
substance |
False |
False |
... |
| z |
z |
Compartment1 |
amount |
0 |
substance |
substance |
False |
False |
... |
| void |
void |
Compartment1 |
amount |
0 |
substance |
substance |
True |
False |
... |
|
Global Parameters
|
| ID |
Name |
Value |
Units |
Derived Units |
Constant |
| cellmass |
cellmass |
0.25 |
... |
... |
False |
|
Rules
|
| Metaid |
Type |
Formula |
| rule1 |
rateRule |
cellmass'=0.035*cellmass |
|
Reactions, global and local contexts suppressed
|
| ID |
Name |
Fast |
Reaction |
Modifiers |
Parameters |
Formula |
Contribution to ODEs |
| reaction1 |
reaction1 |
False |
void <--> z |
... |
k->0.015 |
0.015 |
z'=0.015 |
| reaction2 |
reaction2 |
False |
u <--> void |
... |
k6->1. |
1.*u |
u'=-1.*u |
| reaction3 |
reaction3 |
False |
z <--> u |
... |
k4->180., k4prime->0.018 |
180.*(0.00009999999999999999 + u^2)*z |
u'=180.*(0.00009999999999999999 + u^2)*z, z'=-180.*(0.00009999999999999999 + u^2)*z |
|
Differential Equations, global context suppressed
|
| Variable |
ODEs |
| cellmass |
cellmass'=0.035*cellmass |
| u |
u'=-1.*u + 180.*(0.00009999999999999999 + u^2)*z |
| z |
z'=0.015 - 180.*(0.00009999999999999999 + u^2)*z |
|
Events
|
| ID |
Name |
Trigger |
Delay |
TimeUnits |
Event |
| cellDivision |
cellDivision |
cellmass > 0.75 && u > 0.175 |
0 |
second |
cellmass->cellmass/2 |
Generated by jamestkirk with MathSBML 2.2.1-beta-17 (25-Feb-2004) on Slartibartifast at 27-February-2004 22:11:08.908423 using PowerPC/PowerMac/MacOSX |