MATLAB_SBML_STRUCTURE_FUNCTIONS\RATERULE

The functions allow users to create and work with the SBML RateRule structure.

Function are:

RateRule = RateRule_create(level(optional), version(optional) )

Takes

1. level, an integer representing an SBML level (optional)
2. version, an integer representing an SBML version (optional)

Returns

1. a MATLAB_SBML RateRule structure of the appropriate level and version

NOTE: the optional level and version preserve backwards compatibility a missing version argument will default to L1V2; L2V4 or L3V1 missing both arguments will default to L3V1

formula = RateRule_getFormula(SBMLRateRule)

Takes

1. SBMLRateRule, an SBML RateRule structure

Returns

1. the value of the formula attribute

metaid = RateRule_getMetaid(SBMLRateRule)

Takes

1. SBMLRateRule, an SBML RateRule structure

Returns

1. the value of the metaid attribute

sboTerm = RateRule_getSBOTerm(SBMLRateRule)

Takes

1. SBMLRateRule, an SBML RateRule structure

Returns

1. the value of the sboTerm attribute

variable = RateRule_getVariable(SBMLRateRule)

Takes

1. SBMLRateRule, an SBML RateRule structure

Returns

1. the value of the variable attribute

value = RateRule_isSetFormula(SBMLRateRule)

Takes

1. SBMLRateRule, an SBML RateRule structure

Returns

1. value =
   • 1 if the formula attribute is set
   • 0 otherwise

value = RateRule_isSetMetaid(SBMLRateRule)

Takes

1. SBMLRateRule, an SBML RateRule structure

Returns

1. value =
   • 1 if the metaid attribute is set
   • 0 otherwise

value = RateRule_isSetSBOTerm(SBMLRateRule)

Takes

1. SBMLRateRule, an SBML RateRule structure

Returns

1. value =
   • 1 if the sboTerm attribute is set
   • 0 otherwise

value = RateRule_isSetVariable(SBMLRateRule)

Takes

1. SBMLRateRule, an SBML RateRule structure

Returns

1. value =
   • 1 if the variable attribute is set
   • 0 otherwise

SBMLRateRule = RateRule_setFormula(SBMLRateRule, formula)

Takes

1. SBMLRateRule, an SBML RateRule structure
2. formula; a string representing the formula to be set

Returns

1. the SBML RateRule structure with the new value for the formula attribute

SBMLRateRule = RateRule_setMetaid(SBMLRateRule, metaid)

Takes

1. SBMLRateRule, an SBML RateRule structure
2. metaid; a string representing the metaid to be set

Returns

1. the SBML RateRule structure with the new value for the metaid attribute

SBMLRateRule = RateRule_setSBOTerm(SBMLRateRule, sboTerm)

Takes

1. SBMLRateRule, an SBML RateRule structure
2. sboTerm, an integer representing the sboTerm to be set

Returns

1. the SBML RateRule structure with the new value for the sboTerm attribute

SBMLRateRule = RateRule_setVariable(SBMLRateRule, variable)

Takes

1. SBMLRateRule, an SBML RateRule structure
2. variable; a string representing the variable to be set

Returns

1. the SBML RateRule structure with the new value for the variable attribute

SBMLRateRule = RateRule_unsetFormula(SBMLRateRule)

Takes

1. SBMLRateRule, an SBML RateRule structure

Returns

1. the SBML RateRule structure with the formula attribute unset

SBMLRateRule = RateRule_unsetMetaid(SBMLRateRule)

Takes

1. SBMLRateRule, an SBML RateRule structure

Returns

1. the SBML RateRule structure with the metaid attribute unset

SBMLRateRule = RateRule_unsetSBOTerm(SBMLRateRule)

Takes

1. SBMLRateRule, an SBML RateRule structure

Returns

1. the SBML RateRule structure with the sboTerm attribute unset

SBMLRateRule = RateRule_unsetVariable(SBMLRateRule)

Takes

1. SBMLRateRule, an SBML RateRule structure

Returns

1. the SBML RateRule structure with the variable attribute unset