MATLABSBMLSTRUCTURE_FUNCTIONS\RULE

The functions allow users to create and work with the SBML Rule structure.

Function are:

Rule = Rule_create(level(optional), version(optional) )

Takes

1. level, an integer representing an SBML level (optional)
2. version, an integer representing an SBML version (optional)

Returns

1. a MATLAB_SBML Rule structure of the appropriate level and version

NOTE: the optional level and version preserve backwards compatibility a missing version argument will default to L1V2; L2V4 or L3V1 missing both arguments will default to L3V1

formula = Rule_getFormula(SBMLRule)

Takes

1. SBMLRule, an SBML Rule structure

Returns

1. the value of the formula attribute

sboTerm = Rule_getSBOTerm(SBMLRule)

Takes

1. SBMLRule, an SBML Rule structure

Returns

1. the value of the sboTerm attribute

value = Rule_isSetFormula(SBMLRule)

Takes

1. SBMLRule, an SBML Rule structure

Returns

1. value =
   • 1 if the formula attribute is set
   • 0 otherwise

value = Rule_isSetSBOTerm(SBMLRule)

Takes

1. SBMLRule, an SBML Rule structure

Returns

1. value =
   • 1 if the sboTerm attribute is set
   • 0 otherwise

SBMLRule = Rule_setFormula(SBMLRule, formula)

Takes

1. SBMLRule, an SBML Rule structure
2. formula; a string representing the formula to be set

Returns

1. the SBML Rule structure with the new value for the formula attribute

SBMLRule = Rule_setSBOTerm(SBMLRule, sboTerm)

Takes

1. SBMLRule, an SBML Rule structure
2. sboTerm, an integer representing the sboTerm to be set

Returns

1. the SBML Rule structure with the new value for the sboTerm attribute

SBMLRule = Rule_unsetFormula(SBMLRule)

Takes

1. SBMLRule, an SBML Rule structure

Returns

1. the SBML Rule structure with the formula attribute unset

SBMLRule = Rule_unsetSBOTerm(SBMLRule)

Takes

1. SBMLRule, an SBML Rule structure

Returns

1. the SBML Rule structure with the sboTerm attribute unset