| addCVTerm(CVTerm *term, bool newBag=false) | SBase | |
| addModifiedDate(Date *date) | SBase | |
| appendAnnotation(const XMLNode *annotation) | SBase | virtual |
| appendAnnotation(const std::string &annotation) | SBase | virtual |
| appendNotes(const XMLNode *notes) | SBase | |
| appendNotes(const std::string ¬es) | SBase | |
| basePoint1_X() const | RenderCubicBezier | |
| basePoint1_X() | RenderCubicBezier | |
| basePoint1_Y() const | RenderCubicBezier | |
| basePoint1_Y() | RenderCubicBezier | |
| basePoint1_Z() const | RenderCubicBezier | |
| basePoint1_Z() | RenderCubicBezier | |
| basePoint2_X() const | RenderCubicBezier | |
| basePoint2_X() | RenderCubicBezier | |
| basePoint2_Y() const | RenderCubicBezier | |
| basePoint2_Y() | RenderCubicBezier | |
| basePoint2_Z() const | RenderCubicBezier | |
| basePoint2_Z() | RenderCubicBezier | |
| clone() const | RenderCubicBezier | virtual |
| deleteDisabledPlugins(bool recursive=true) | SBase | |
| disablePackage(const std::string &pkgURI, const std::string &pkgPrefix) | SBase | |
| enablePackage(const std::string &pkgURI, const std::string &pkgPrefix, bool flag) | SBase | |
| getAllElements(ElementFilter *filter=NULL) | SBase | virtual |
| getAllElementsFromPlugins(ElementFilter *filter=NULL) | SBase | virtual |
| getAncestorOfType(int type, const std::string &pkgName="core") | SBase | |
| getAncestorOfType(int type, const std::string pkgName="core") const | SBase | |
| getAnnotation() | SBase | |
| getAnnotation() const | SBase | |
| getAnnotationString() | SBase | |
| getAnnotationString() const | SBase | |
| getBasePoint1_x() const | RenderCubicBezier | |
| getBasePoint1_x() | RenderCubicBezier | |
| getBasePoint1_y() const | RenderCubicBezier | |
| getBasePoint1_y() | RenderCubicBezier | |
| getBasePoint1_z() const | RenderCubicBezier | |
| getBasePoint1_z() | RenderCubicBezier | |
| getBasePoint2_x() const | RenderCubicBezier | |
| getBasePoint2_x() | RenderCubicBezier | |
| getBasePoint2_y() const | RenderCubicBezier | |
| getBasePoint2_y() | RenderCubicBezier | |
| getBasePoint2_z() const | RenderCubicBezier | |
| getBasePoint2_z() | RenderCubicBezier | |
| getColumn() const | SBase | |
| getCreatedDate() const | SBase | |
| getCreatedDate() | SBase | |
| getCVTerm(unsigned int n) | SBase | |
| getCVTerms() | SBase | |
| getCVTerms() const | SBase | |
| getDisabledPlugin(unsigned int n) | SBase | |
| getDisabledPlugin(unsigned int n) const | SBase | |
| getElementByMetaId(const std::string &metaid) | SBase | virtual |
| getElementByMetaId(const std::string &metaid) const | SBase | |
| getElementBySId(const std::string &id) | SBase | virtual |
| getElementBySId(const std::string &id) const | SBase | virtual |
| getElementName() const | RenderCubicBezier | virtual |
| getId() const | SBase | virtual |
| getIdAttribute() const | SBase | |
| getLevel() const | SBase | |
| getLine() const | SBase | |
| getMetaId() const | SBase | |
| getMetaId() | SBase | |
| getModel() const | SBase | |
| getModelHistory() const | SBase | |
| getModelHistory() | SBase | |
| getModifiedDate(unsigned int n) | SBase | |
| getName() const | SBase | virtual |
| getNamespaces() const | SBase | virtual |
| getNotes() | SBase | |
| getNotes() const | SBase | |
| getNotesString() | SBase | |
| getNotesString() const | SBase | |
| getNumCVTerms() const | SBase | |
| getNumDisabledPlugins() const | SBase | |
| getNumModifiedDates() | SBase | |
| getNumPlugins() const | SBase | |
| getPackageCoreVersion() const | SBase | |
| getPackageName() const | SBase | |
| getPackageVersion() const | SBase | |
| getParentSBMLObject() | SBase | |
| getParentSBMLObject() const | SBase | |
| getPlugin(const std::string &package) | SBase | |
| getPlugin(const std::string &package) const | SBase | |
| getPlugin(unsigned int n) | SBase | |
| getPlugin(unsigned int n) const | SBase | |
| getPrefix() const | SBase | |
| getResourceBiologicalQualifier(std::string resource) const | SBase | |
| getResourceModelQualifier(std::string resource) const | SBase | |
| getSBMLDocument() const | SBase | |
| getSBMLDocument() | SBase | |
| getSBOTerm() const | SBase | |
| getSBOTermAsURL() const | SBase | |
| getSBOTermID() const | SBase | |
| getTypeCode() const | RenderCubicBezier | virtual |
| getURI() const | SBase | |
| getUserData() const | SBase | |
| getVersion() const | SBase | |
| getX() const | RenderPoint | |
| getX() | RenderPoint | |
| getY() const | RenderPoint | |
| getY() | RenderPoint | |
| getZ() const | RenderPoint | |
| getZ() | RenderPoint | |
| hasRequiredAttributes() const | RenderCubicBezier | virtual |
| hasValidLevelVersionNamespaceCombination() | SBase | |
| initDefaults() | RenderPoint | |
| isPackageEnabled(const std::string &pkgName) const | SBase | |
| isPackageURIEnabled(const std::string &pkgURI) const | SBase | |
| isPkgEnabled(const std::string &pkgName) const | SBase | |
| isPkgURIEnabled(const std::string &pkgURI) const | SBase | |
| isRenderCubicBezier() const | RenderPoint | virtual |
| isRenderPoint() const | RenderPoint | virtual |
| isSetAnnotation() const | SBase | |
| isSetBasePoint1_x() const | RenderCubicBezier | |
| isSetBasePoint1_y() const | RenderCubicBezier | |
| isSetBasePoint1_z() const | RenderCubicBezier | |
| isSetBasePoint2_x() const | RenderCubicBezier | |
| isSetBasePoint2_y() const | RenderCubicBezier | |
| isSetBasePoint2_z() const | RenderCubicBezier | |
| isSetCreatedDate() const | SBase | |
| isSetId() const | SBase | virtual |
| isSetIdAttribute() const | SBase | |
| isSetMetaId() const | SBase | |
| isSetModelHistory() const | SBase | |
| isSetModifiedDate() const | SBase | |
| isSetName() const | SBase | virtual |
| isSetNotes() const | SBase | |
| isSetSBOTerm() const | SBase | |
| isSetUserData() const | SBase | |
| isSetX() const | RenderPoint | |
| isSetY() const | RenderPoint | |
| isSetZ() const | RenderPoint | |
| matchesRequiredSBMLNamespacesForAddition(const SBase *sb) | SBase | |
| matchesRequiredSBMLNamespacesForAddition(const SBase *sb) const | SBase | |
| matchesSBMLNamespaces(const SBase *sb) | SBase | |
| matchesSBMLNamespaces(const SBase *sb) const | SBase | |
| operator=(const RenderCubicBezier &rhs) | RenderCubicBezier | |
| RenderPoint::operator=(const RenderPoint &rhs) | RenderPoint | |
| SBase::operator=(const SBase &rhs) | SBase | |
| operator==(const RenderCubicBezier &left) const | RenderCubicBezier | |
| RenderPoint::operator==(const RenderPoint &left) const | RenderPoint | |
| read(const XMLNode &node, XMLErrorSeverityOverride_t flag=LIBSBML_OVERRIDE_DISABLED) | SBase | |
| removeFromParentAndDelete() | SBase | virtual |
| removeTopLevelAnnotationElement(const std::string &elementName, const std::string elementURI="", bool removeEmpty=true) | SBase | |
| renameMetaIdRefs(const std::string &oldid, const std::string &newid) | SBase | virtual |
| renameSIdRefs(const std::string &oldid, const std::string &newid) | SBase | virtual |
| renameUnitSIdRefs(const std::string &oldid, const std::string &newid) | SBase | virtual |
| RenderCubicBezier(unsigned int level=RenderExtension::getDefaultLevel(), unsigned int version=RenderExtension::getDefaultVersion(), unsigned int pkgVersion=RenderExtension::getDefaultPackageVersion()) | RenderCubicBezier | |
| RenderCubicBezier(RenderPkgNamespaces *renderns) | RenderCubicBezier | |
| RenderCubicBezier(RenderPkgNamespaces *renderns, const RelAbsVector &bp1_x, const RelAbsVector &bp1_y, const RelAbsVector &bp1_z, const RelAbsVector &bp2_x, const RelAbsVector &bp2_y, const RelAbsVector &bp2_z, const RelAbsVector &end_x, const RelAbsVector &end_y, const RelAbsVector &end_z) | RenderCubicBezier | |
| RenderCubicBezier(const XMLNode &node, unsigned int l2version=4) | RenderCubicBezier | |
| RenderCubicBezier(const RenderCubicBezier &orig) | RenderCubicBezier | |
| RenderPoint(unsigned int level=RenderExtension::getDefaultLevel(), unsigned int version=RenderExtension::getDefaultVersion(), unsigned int pkgVersion=RenderExtension::getDefaultPackageVersion()) | RenderPoint | |
| RenderPoint(RenderPkgNamespaces *renderns) | RenderPoint | |
| RenderPoint(RenderPkgNamespaces *renderns, const RelAbsVector &x, const RelAbsVector &y, const RelAbsVector &z=RelAbsVector(0.0, 0.0)) | RenderPoint | |
| RenderPoint(const XMLNode &node, unsigned int l2version=4) | RenderPoint | |
| RenderPoint(const RenderPoint &orig) | RenderPoint | |
| replaceTopLevelAnnotationElement(const XMLNode *annotation) | SBase | |
| replaceTopLevelAnnotationElement(const std::string &annotation) | SBase | |
| setAnnotation(const XMLNode *annotation) | SBase | virtual |
| setAnnotation(const std::string &annotation) | SBase | virtual |
| setBasePoint1(const RelAbsVector &x, const RelAbsVector &y, const RelAbsVector &z=RelAbsVector(0.0, 0.0)) | RenderCubicBezier | |
| setBasePoint1_X(const RelAbsVector &x) | RenderCubicBezier | |
| setBasePoint1_x(const RelAbsVector &basePoint1_x) | RenderCubicBezier | |
| setBasePoint1_y(const RelAbsVector &basePoint1_y) | RenderCubicBezier | |
| setBasePoint1_Y(const RelAbsVector &y) | RenderCubicBezier | |
| setBasePoint1_z(const RelAbsVector &basePoint1_z) | RenderCubicBezier | |
| setBasePoint1_Z(const RelAbsVector &z) | RenderCubicBezier | |
| setBasePoint2(const RelAbsVector &x, const RelAbsVector &y, const RelAbsVector &z=RelAbsVector(0.0, 0.0)) | RenderCubicBezier | |
| setBasePoint2_X(const RelAbsVector &x) | RenderCubicBezier | |
| setBasePoint2_x(const RelAbsVector &basePoint2_x) | RenderCubicBezier | |
| setBasePoint2_Y(const RelAbsVector &y) | RenderCubicBezier | |
| setBasePoint2_y(const RelAbsVector &basePoint2_y) | RenderCubicBezier | |
| setBasePoint2_z(const RelAbsVector &basePoint2_z) | RenderCubicBezier | |
| setBasePoint2_Z(const RelAbsVector &z) | RenderCubicBezier | |
| setCoordinates(const RelAbsVector &x, const RelAbsVector &y, const RelAbsVector &z=RelAbsVector(0.0, 0.0)) | RenderPoint | |
| setCreatedDate(Date *date) | SBase | |
| setElementText(const std::string &text) | SBase | protectedvirtual |
| setId(const std::string &sid) | SBase | virtual |
| setIdAttribute(const std::string &sid) | SBase | virtual |
| setMetaId(const std::string &metaid) | SBase | |
| setModelHistory(ModelHistory *history) | SBase | |
| setName(const std::string &name) | SBase | virtual |
| setNamespaces(XMLNamespaces *xmlns) | SBase | |
| setNotes(const XMLNode *notes) | SBase | |
| setNotes(const std::string ¬es, bool addXHTMLMarkup=false) | SBase | |
| setOffsets(const RelAbsVector &x, const RelAbsVector &y, const RelAbsVector &z=RelAbsVector(0.0, 0.0)) | RenderPoint | |
| setSBOTerm(int value) | SBase | virtual |
| setSBOTerm(const std::string &sboid) | SBase | virtual |
| setUserData(void *userData) | SBase | |
| setX(const RelAbsVector &x) | RenderPoint | |
| setY(const RelAbsVector &y) | RenderPoint | |
| setZ(const RelAbsVector &z) | RenderPoint | |
| toSBML() | SBase | |
| toXML(const std::string &name) const | RenderCubicBezier | virtual |
| toXMLNode() | SBase | |
| unsetAnnotation() | SBase | |
| unsetBasePoint1_x() | RenderCubicBezier | |
| unsetBasePoint1_y() | RenderCubicBezier | |
| unsetBasePoint1_z() | RenderCubicBezier | |
| unsetBasePoint2_x() | RenderCubicBezier | |
| unsetBasePoint2_y() | RenderCubicBezier | |
| unsetBasePoint2_z() | RenderCubicBezier | |
| unsetCreatedDate() | SBase | |
| unsetCVTerms() | SBase | |
| unsetId() | SBase | virtual |
| unsetIdAttribute() | SBase | |
| unsetMetaId() | SBase | |
| unsetModelHistory() | SBase | |
| unsetModifiedDates() | SBase | |
| unsetName() | SBase | virtual |
| unsetNotes() | SBase | |
| unsetSBOTerm() | SBase | |
| unsetUserData() | SBase | |
| unsetX() | RenderPoint | |
| unsetY() | RenderPoint | |
| unsetZ() | RenderPoint | |
| writeXMLNS(XMLOutputStream &stream) const | RenderCubicBezier | protectedvirtual |
| x() const | RenderPoint | |
| x() | RenderPoint | |
| y() const | RenderPoint | |
| y() | RenderPoint | |
| z() const | RenderPoint | |
| z() | RenderPoint | |
| ~RenderCubicBezier() | RenderCubicBezier | virtual |
| ~RenderPoint() | RenderPoint | virtual |
| ~SBase() | SBase | virtual |