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PREV CLASS NEXT CLASS FRAMES NO FRAMES | DETAIL: CONSTRUCTORS | METHODS | FIELDS |
Removed Methods | |
void addNamespace(String ) |
Adds an additional namespace to the set of namespaces of this SBase if the given namespace is not yet present within this SortedSet. |
SortedSet<String> getNamespaces() |
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boolean removeNamespace(String ) |
@param namespace |
void unregister(SBase ) |
Added Methods | |
void addExtension(String, |
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void addPlugin(String, |
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History createHistory() |
Creates a new History and associates it with the annotation of this element. |
SBasePlugin createPlugin(String ) |
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void disablePackage(String ) |
Disables the given SBML Level 3 package on this SBMLDocument. |
void enablePackage(String ) |
Enables the given SBML Level 3 package on this SBMLDocument. |
void enablePackage(String, |
Enables or disables the given SBML Level 3 package on this SBMLDocument. |
List<String> filterCVTerms(Qualifier, |
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List<String> filterCVTerms(Qualifier, |
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int getCVTermCount() |
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SBasePlugin getExtension(String ) |
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int getExtensionCount() |
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Map<String, SBasePlugin> ) getExtensionPackages() |
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IdManager getIdManager(SBase ) |
Returns an IdManager that can register the given SBase. |
String getNamespace() |
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int getNumPlugins() |
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SBasePlugin getPlugin(String ) |
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boolean isExtendedByOtherPackages() |
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boolean isPackageEnabled(String ) |
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boolean isPackageURIEnabled(String ) |
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boolean isPkgEnabled(String ) |
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boolean isPkgURIEnabled(String ) |
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boolean isSetPlugin(String ) |
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boolean isValidMetaId(String ) |
Checks if the given identifier candidate satisfies the requirements for a valid meta identifier (see SBML L2V4 p. |
boolean removeCVTerm(CVTerm ) |
Removes the given CVTerm. |
CVTerm removeCVTerm(int ) |
Removes the CVTerm at the given index. |
void setNamespace(String ) |
Sets the XML namespace to which this SBase belong. |
void unregisterChild(SBase ) |
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void unsetExtension(String ) |
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void unsetNamespace() |
Unsets the namespace that is associated to this SBase. |
void unsetPlugin(String ) |
Changed Methods | ||
void firePropertyChange(String, |
Method was inherited from AbstractTreeNode, but is now defined locally. | |
String getAnnotationString() |
Change in exceptions thrown from no exceptions to javax.xml.stream.XMLStreamException . |
Returns the Annotation of this SBML object as a String. |
String getNotesString() |
Change in exceptions thrown from no exceptions to javax.xml.stream.XMLStreamException . |
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void appendNotes(String ) |
Change in exceptions thrown from no exceptions to javax.xml.stream.XMLStreamException . |
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void setNotes(String ) |
Change in exceptions thrown from no exceptions to javax.xml.stream.XMLStreamException . |
Added Fields | |
SortedMap<String, XMLNode> ) ignoredExtensions |
Map containing the ignored package objects. |
XMLNode ignoredXMLElements |
Contains the unknown XML attributes or elements. |
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