All Methods

Removals

Additions

Changes

Bold is New, strike is deleted

A  C G I P R S T U TOP
addNestedCVTerm (CVTerm)
appendAnnotation
  type  (String) in org.sbml.jsbml.AbstractSBase
  type  (XMLNode) in org.sbml.jsbml.AbstractSBase
  type  (String) in org.sbml.jsbml.SBase
  type  (XMLNode) in org.sbml.jsbml.SBase
appendNonRDFAnnotation
  type  (String) in org.sbml.jsbml.Annotation
  type  (XMLNode) in org.sbml.jsbml.Annotation
appendNoRDFAnnotation (String)
astNodeToTree (ASTNode, String, String)

C  A G I P R S T U TOP
checkAndSetPackageNamespaceAndVersion
  type  (SBase) in org.sbml.jsbml.AbstractSBase
  type  (SBasePlugin, SBMLDocument) in org.sbml.jsbml.AbstractSBase
checkConsistency (String, Map<String, String>)
checkRelationalArgumentBrackets (ASTNode)
clone ()
createNestedCVTerm ()
createStoichiometryMath (ASTNode)
createTrigger (ASTNode)

G  A C I P R S T U TOP
getDerivedUnits ()
getElementNamespace ()
getEnabledPackageNamespace (String)
getErrorsBySeverity (SEVERITY)
getIdOrName (NamedSBase)
getListOfNestedCVTerms ()
getNameOrId (NamedSBase)
getNestedCVTerm (int)
getNestedCVTermCount ()
getNumNestedCVTerms ()
getPackageName
  type  () in org.sbml.jsbml.AbstractSBase
  type  () in org.sbml.jsbml.SBase
getPackageVersion
  type  () in org.sbml.jsbml.AbstractSBase
  type  () in org.sbml.jsbml.SBase
getURI
  type  () in org.sbml.jsbml.AbstractSBase
  type  () in org.sbml.jsbml.SBase
getXMLNode ()

I  A C G P R S T U TOP
isCompartmentMandatory
  type  () in org.sbml.jsbml.Reaction
  type  () in org.sbml.jsbml.Species
isSetListOfNestedCVTerms ()
isSetPackageVErsion
  type  () in org.sbml.jsbml.AbstractSBase
  type  () in org.sbml.jsbml.SBase
isSetPackageVersion
  type  () in org.sbml.jsbml.ext.AbstractSBasePlugin
  type  () in org.sbml.jsbml.ext.SBasePlugin
isValidChemicalFormula (String)

P  A C G I R S T U TOP
packageVersionMismatchMessage
  type  (SBase, SBase) in org.sbml.jsbml.LevelVersionError
  type  (SBasePlugin, SBase) in org.sbml.jsbml.LevelVersionError
piecewise (MathContainer, ASTNode[])

R  A C G I P S T U TOP
removeNestedCVTerm
  type  (CVTerm) in org.sbml.jsbml.CVTerm
  type  (int) in org.sbml.jsbml.CVTerm

S  A C G I P R T U TOP
setAnnotation
  type  (String) in org.sbml.jsbml.AbstractSBase
  type  (XMLNode) in org.sbml.jsbml.AbstractSBase
  type  (String) in org.sbml.jsbml.SBase
  type  (XMLNode) in org.sbml.jsbml.SBase
setCompartment
  type  (String) in org.sbml.jsbml.Reaction
  type  (Compartment) in org.sbml.jsbml.Reaction
  type  (String) in org.sbml.jsbml.Species
  type  (Compartment) in org.sbml.jsbml.Species
setListOfNestedCVTerms (List<CVTerm>)
setMetaId
  type  (String) in org.sbml.jsbml.AbstractSBase
  type  (String) in org.sbml.jsbml.SBase
setNamespace (String)
setPackageName (String)
setPackageVersion
  type  (int) in org.sbml.jsbml.AbstractSBase
  type  (int) in org.sbml.jsbml.SBase
  type  (int) in org.sbml.jsbml.ext.AbstractSBasePlugin
  type  (int) in org.sbml.jsbml.ext.SBasePlugin
setParentSBMLObject (MathContainer)
setXMLNode (XMLNode)
size ()

T  A C G I P R S U TOP
toASTNode2 ()
toSimpleString ()
toString (PropertyChangeEvent)
toXML ()
toXMLNode ()

U  A C G I P R S T TOP
unsetCompartment
  type  () in org.sbml.jsbml.Reaction
  type  () in org.sbml.jsbml.Species
unsetListOfNestedCVTerms ()