public interface SBMLErrorCodes
Modifier and Type | Field and Description |
---|---|
static int |
ARRAYS_10101
To conform to Version 1 of the Arrays package specification for SBML Level 3, an SBML docu-
ment must declare the use of the following XML Namespace:
“http://www.sbml.org/sbml/level3/version1/arrays/version1”.
|
static int |
ARRAYS_10102
Wherever they appear in an SBML document, elements and attributes from the Arrays package
must be declared either implicitly or explicitly to be in the XML namespace
“http://www.sbml.org/sbml/level3/version1/arrays/version1”.
|
static int |
ARRAYS_10201
In all SBML documents using the Arrays package, the SBML object must include a value for the
attribute arrays:required attribute.
|
static int |
ARRAYS_10202
The value of attribute arrays:required on the SBML object must be of the data type boolean.
|
static int |
ARRAYS_10203
The value of attribute arrays:required on the SBML object must be set to “true” (Reference:
SBML Level 3 Package Specification for Arrays, Version 1, Section 3.1 on page 6.)
|
static int |
ARRAYS_10204 |
static int |
ARRAYS_10205
Wherever MathML content appears in an SBML document, the MathML content must be
placed within a math element, and that math element must be either explicitly or implicitly
declared to be in the XML namespace “http://www.w3.org/1998/Math/MathML”.
|
static int |
ARRAYS_10206
The first argument of a MathML selector must be a MathML vector object or a valid identi-
fier to an SBase object extended with a list of Dimension objects.
|
static int |
ARRAYS_10207 |
static int |
ARRAYS_10208 |
static int |
ARRAYS_10209 |
static int |
ARRAYS_10210 |
static int |
ARRAYS_10211 |
static int |
ARRAYS_10212 |
static int |
ARRAYS_10213 |
static int |
ARRAYS_20101 |
static int |
ARRAYS_20102 |
static int |
ARRAYS_20103 |
static int |
ARRAYS_20104 |
static int |
ARRAYS_20105 |
static int |
ARRAYS_20106 |
static int |
ARRAYS_20107 |
static int |
ARRAYS_20108 |
static int |
ARRAYS_20109 |
static int |
ARRAYS_20110 |
static int |
ARRAYS_20111 |
static int |
ARRAYS_20112 |
static int |
ARRAYS_20113 |
static int |
ARRAYS_20114 |
static int |
ARRAYS_20115 |
static int |
ARRAYS_20116 |
static int |
ARRAYS_20201
A Dimension object may have the optional SBML Level 3 Core attributes metaid and sboTerm.
|
static int |
ARRAYS_20202 |
static int |
ARRAYS_20203 |
static int |
ARRAYS_20204 |
static int |
ARRAYS_20205 |
static int |
ARRAYS_20301 |
static int |
ARRAYS_20302 |
static int |
ARRAYS_20303 |
static int |
ARRAYS_20304 |
static int |
ARRAYS_20305 |
static int |
ARRAYS_20306 |
static int |
ARRAYS_20307 |
static int |
ARRAYS_20308 |
static int |
COMP_10100
Error code 1010100:
|
static int |
COMP_10101
Error code 1010101:
To conform to Version 1 of the Hierarchical Model Composition package
specification for SBML Level 3, an SBML document must declare the use of the
following XML Namespace:
'http://www.sbml.org/sbml/level3/version1/comp/version1' Reference: L3V1 Comp V1
Section 3.1
|
static int |
COMP_10102
Error code 1010102:
Wherever they appear in an SBML document, elements and attributes from the
Hierarchical Model Composition package must be declared either implicitly or
explicitly to be in the XML namespace
'http://www.sbml.org/sbml/level3/version1/comp/version1' Reference: L3V1 Comp V1
Section 3.1
|
static int |
COMP_10301
Error code 1010301:
(Extends validation rule #10301 in the SBML Level 3 Version 1 Core
specification.) Within a <model> or <modelDefinition> object, the values of the
attributes id and comp:id on every instance of the following classes of objects
must be unique across the set of all id and comp:id attribute values of all such
objects in a model: the model itself, plus all contained <functionDefinition>,
<compartment>, <species>, <reaction>, <speciesReference>,
<modifierSpeciesReference>, <event>, and <parameter> objects, plus the
<submodel> and <deletion> objects defined by the Hierarchical Model Composition
package, plus any objects defined by any other package with 'package:id'
attributes defined as falling in the 'SId' namespace.
|
static int |
COMP_10302
Error code 1010302:
The values of the attributes 'id' and 'comp:id' on every instance of all
<model>, <modelDefinition>, and <externalModelDefinition> objects must be unique
across the set of all 'id' and 'comp:id' attribute values of such objects in the
SBML document to which they belong.
|
static int |
COMP_10303
Error code 1010303:
Within <model> and <modelDefinition> objects inside an SBML document, the value
of the attribute 'comp:id' on every instance of a <port> object must be unique
across the set of all 'comp:id' attribute values of all such objects in the
model.
|
static int |
COMP_10304
Error code 1010304:
The value of a comp:id attribute must always conform to the syntax of the SBML
data type SId.
|
static int |
COMP_10308
Error code 1010308:
The value of a 'comp:submodelRef' attribute on <replacedElement> and
<replacedBy> objects must always conform to the syntax of the SBML data type
SId.
|
static int |
COMP_10309
Error code 1010309:
The value of a 'comp:deletion' attribute on <replacedElement> objects must
always conform to the syntax of the SBML data type SId.
|
static int |
COMP_10310
Error code 1010310:
The value of a 'comp:conversionFactor' attribute on <replacedElement> objects
must always conform to the syntax of the SBML data type SId.
|
static int |
COMP_10311
Error code 1010311:
The value of a 'comp:name' attribute must always conform to the syntax of type
string.
|
static int |
COMP_10501
Error code 1010501:
If one element replaces another, whether it is the target of a <replacedBy>
element, or whether it has a child <replacedElement>, the units of the replaced
element, multiplied by the units of any applicable conversion factor, should
equal the units of the replacement element.
|
static int |
COMP_20101
Error code 1020101:
Any object derived from the extended SBase class (defined in the Hierarchical
Model Composition package) may contain at most one instance of a
<listOfReplacedElements> subobject.
|
static int |
COMP_20102
Error code 1020102:
Apart from the general notes and annotation subobjects permitted on all SBML
objects, a <listOfReplacedElements> container object may only contain
<replacedElement> objects.
|
static int |
COMP_20103
Error code 1020103:
A <listOfReplacedElements> object may have the optional attributes 'metaid' and
'sboTerm' defined by SBML Level 3 Core.
|
static int |
COMP_20104
Error code 1020104:
The <listOfReplacedElements> in an SBase object is optional, but if present,
must not be empty.
|
static int |
COMP_20105
Error code 1020105:
Any object derived from the extended SBase class (defined in the Hierarchical
Model Composition package) may contain at most one instance of a <replacedBy>
subobject.
|
static int |
COMP_20201
Error code 1020201:
In all SBML documents using the HierarchicalModel Composition package, the SBML
object must include a value for the attribute 'comp:required' attribute.
|
static int |
COMP_20202
Error code 1020202:
The value of attribute 'comp:required' on the SBML object must be of the data
type Boolean.
|
static int |
COMP_20203
Error code 1020203:
The value of attribute 'comp:required' on the SBML object must be set to 'true'
if the Model object within the SBML object contains any Submodel with Species,
Parameter, Compartment, Reaction, or Event objects that have not been either
directly or indirectly replaced.
|
static int |
COMP_20204
Error code 1020204:
The value of attribute 'comp:required' on the SBML object must be set to 'false'
if the Model object within the SBML object contains no Submodel objects, or if
all Submodel objects that are present contain no Species, Parameter,
Compartment, Reaction, or Event objects that have not been either directly or
indirectly replaced.
|
static int |
COMP_20205
Error code 1020205:
There may be at most one instance of the <listOfModelDefinitions> within an SBML
object that uses the SBML Level 3 Hierarchical Model Composition package.
|
static int |
COMP_20206
Error code 1020206:
The various 'ListOf' subobjects within an SBML object are optional, but if
present, these container objects must not be empty.
|
static int |
COMP_20207
Error code 1020207:
Apart from the general notes and annotation subobjects permitted on all SBML
objects, a <listOfModelDefinitions> container may only contain <modelDefinition>
objects.
|
static int |
COMP_20208
Error code 1020208:
Apart from the general notes and annotation subobjects permitted on all SBML
objects, a <listOfExternalModelDefinitions> container may only contain
<externalModelDefinition> objects.
|
static int |
COMP_20209
Error code 1020209:
A <listOfModelDefinitions> object may have the optional attributes 'metaid' and
'sboTerm'.
|
static int |
COMP_20210
Error code 1020210:
A <listOfExternalModelDefinitions> object may have the optional attributes
'metaid' and 'sboTerm'.
|
static int |
COMP_20211
Error code 1020211:
There may be at most one instance of the <listOfExternalModelDefinitions> within
an SBML object that uses the SBML Level 3 Hierarchical Model Composition
package.
|
static int |
COMP_20212
Error code 1020212:
The value of attribute 'comp:required' on the SBML object must be set to 'true'.
|
static int |
COMP_20301
Error code 1020301:
An <externalModelDefinition> object may have the optional SBML Level 3 Core
attributes 'metaid' and 'sboTerm'.
|
static int |
COMP_20302
Error code 1020302:
An <externalModelDefinition> object may have the optional SBML Level 3 Core
subobjects for notes and annotation.
|
static int |
COMP_20303
Error code 1020303:
An <externalModelDefinition> object must have the attributes 'comp:id' and
'comp:source', and may have the optional attributes 'comp:name',
'comp:modelRef', and 'comp:md5'.
|
static int |
COMP_20304
Error code 1020304:
The value of the 'comp:source' attribute on an <externalModelDefinition> object
must reference an SBML Level 3 Version 1 document.
|
static int |
COMP_20305
Error code 1020305:
The value of the 'comp:modelRef' attribute on an <externalModelDefinition>
object must be the value of an id attribute on a <model>, <modelDefinition>, or
<externalModelDefinition> object in the SBML document referenced by the
'comp:source' attribute.
|
static int |
COMP_20306
Error code 1020306:
The value of the 'comp:md5' attribute, if present on an
<externalModelDefinition> object, should match the calculated MD5 checksum of
the SBML document referenced by the 'comp:source' attribute.
|
static int |
COMP_20307
Error code 1020307:
The value of a 'comp:source' attribute on an <externalModelDefinition> object
must always conform to the syntax of the XML Schema 1.0 data type 'anyURI'.
|
static int |
COMP_20308
Error code 1020308:
The value of a comp:modelRef attribute on an <externalModelDefinition> object
must always conform to the syntax of the SBML data type SId.
|
static int |
COMP_20309
Error code 1020309:
The value of a comp:md5 attribute on an <externalModelDefinition> object must
always conform to the syntax of type string.
|
static int |
COMP_20310
Error code 1020310:
An <externalModelDefinition> object must not reference an
<externalModelDefinition> in a different SBML document that, in turn, refers
back to the original <externalModelDefinition object, whether directly or
indirectly through a chain of <externalModelDefinition> objects.
|
static int |
COMP_20501
Error code 1020501:
There may be at most one instance of each of the following kinds of objects
within a <model> or <modelDefinition> object using Hierarchical Model
Composition: <listOfSubmodels> and <listOfPorts>.
|
static int |
COMP_20502
Error code 1020502:
The various ListOf subobjects with a <model> object are optional, but if
present, these container object must not be empty.
|
static int |
COMP_20503
Error code 1020503:
Apart from the general notes and annotation subobjects permitted on all SBML
objects, a <listOfSubmodels> container object may only contain <submodel>
objects.
|
static int |
COMP_20504
Error code 1020504:
Apart from the general notes and annotation subobjects permitted on all SBML
objects, a <listOfPorts> container object may only contain <port> objects.
|
static int |
COMP_20505
Error code 1020505:
A <listOfSubmodels> object may have the optional attributes 'metaid' and
'sboTerm'.
|
static int |
COMP_20506
Error code 1020506:
A <listOfPorts> object may have the optional attributes 'metaid' and 'sboTerm'.
|
static int |
COMP_20601
Error code 1020601:
A <submodel> object may have the optional SBML Level 3 Core attributes 'metaid'
and 'sboTerm'.
|
static int |
COMP_20602
Error code 1020602:
A <submodel> object may have the optional SBML Level 3 Core subobjects for notes
and annotations.
|
static int |
COMP_20603
Error code 1020603:
There may be at most one <listOfDeletions> container object within a <submodel>
object.
|
static int |
COMP_20604
Error code 1020604:
A <listOfDeletions> container object within a <submodel> object is optional, but
if present, must not be empty.
|
static int |
COMP_20605
Error code 1020605:
Apart from the general notes and annotation subobjects permitted on all SBML
objects, a <listOfDeletions> container object may only contain <deletion>
objects.
|
static int |
COMP_20606
Error code 1020606:
A <listOfDeletions> object may have the optional attributes 'metaid' and
'sboTerm' defined by SBML Level 3 Core.
|
static int |
COMP_20607
Error code 1020607:
A <submodel> object must have the attributes 'comp:id' and 'comp:modelRef'
because they are required, and may also have the optional attributes
'comp:name', 'comp:timeConversionFactor, and/or 'comp:extentConversionFactor'.
|
static int |
COMP_20608
Error code 1020608:
The value of a 'comp:modelRef' attribute on a <submodel> object must always
conform to the syntax of the SBML data type SId.
|
static int |
COMP_20613
Error code 1020613:
The value of a 'comp:timeConversionFactor' attribute on a <submodel> object must
always conform to the syntax of the SBML data type SId.
|
static int |
COMP_20614
Error code 1020614:
The value of a 'comp:extentConversionFactor' attribute on a <submodel> object
must always conform to the syntax of the SBML data type SId.
|
static int |
COMP_20615
Error code 1020615:
The value of a 'comp:modelRef' attribute on a <submodel> must be the identifier
of a <model>, <modelDefinition>, or <externalModelDefinition> object in the same
SBML object as the <submodel>.
|
static int |
COMP_20616
Error code 1020616:
A <model> or <modelDefinition> object must not contain a <submodel> which
references that model object itself.
|
static int |
COMP_20617
Error code 1020617:
A <model> object must not contain a <submodel> which references that <model>
indirectly.
|
static int |
COMP_20622
Error code 1020622:
The value of a 'comp:timeConversionFactor' attribute on a given <submodel>
object must be the identifier of a <parameter> object defined in the same Model
containing the <submodel>.
|
static int |
COMP_20623
Error code 1020623:
The value of a 'comp:extentConversionFactor' attribute on a given <submodel>
object must be the identifier of a <parameter> object defined in the same Model
containing the <submodel>.
|
static int |
COMP_20701
Error code 1020701:
The value of a 'comp:portRef' attribute on an <sBaseRef> object must be the
identifier of a <port> object in the <model> referenced by that <sBaseRef>.
|
static int |
COMP_20702
Error code 1020702:
The value of a 'comp:idRef' attribute on an <sBaseRef> object must be the
identifier of an object contained in (that is, within the SId namespace of) the
<model> referenced by that <sBaseRef>.
|
static int |
COMP_20703
Error code 1020703:
The value of a 'comp:unitRef' attribute on an <sBaseRef> object must be the
identifier of a <unitDefinition< object contained in the <model> referenced by
that <sBaseRef>.
|
static int |
COMP_20704
Error code 1020704:
The value of a 'comp:metaIdRef' attribute on an <sBaseRef> object must be the
value of a 'comp:metaid' attribute on an element contained in the <model>
referenced by that <sBaseRef>.
|
static int |
COMP_20705
Error code 1020705:
If an <sBaseRef> object contains an <sBaseRef> child, the parent <sBaseRef> must
point to a <submodel> object, or a <port> that itself points to a <submodel>
object.
|
static int |
COMP_20706
Error code 1020706:
The value of a 'comp:portRef' attribute on an SBaseRef object must always
conform to the syntax of the SBML data type SId.
|
static int |
COMP_20707
Error code 1020707:
The value of a 'comp:idRef' attribute on an SBaseRef object must always conform
to the syntax of the SBML data type SId.
|
static int |
COMP_20708
Error code 1020708:
The value of a 'comp:unitRef' attribute on an SBaseRef object must always
conform to the syntax of the SBML data type SId.
|
static int |
COMP_20709
Error code 1020709:
The value of a 'comp:metaIdRef' attribute on an SBaseRef object must always
conform to the syntax of the XML data type ID.
|
static int |
COMP_20710
Error code 1020710:
Apart from the general notes and annotation subobjects permitted on all SBML
objects, an SBaseRef object may only contain a single <sBaseRef> child.
|
static int |
COMP_20711
Error code 1020711:
The 'sbaseRef' spelling of an SBaseRef child of an SBaseRef object is considered
deprecated, and 'sBaseRef' should be used instead.
|
static int |
COMP_20712
Error code 1020712:
An <sBaseRef> object must point to another object; that is, a <sBaseRef> object
must always have a value for one of the attributes 'comp:portRef', 'comp:idRef',
'comp:unitRef', or 'comp:metaIdRef'.
|
static int |
COMP_20713
Error code 1020713:
An <sBaseRef> object can only point to one other object; that is, a given
<sBaseRef> object can only have a value for one of the attributes
'comp:portRef', 'comp:idRef', 'comp:unitRef', or 'comp:metaIdRef'.
|
static int |
COMP_20714
Error code 1020714:
Any one SBML object may only be referenced in one of the following ways:
referenced by a single <port> object; referenced by a single <deletion> object;
referenced by a single <replacedElement>; be the parent of a single <replacedBy>
child; be referenced by one or more <replacedBy> objects; or be referenced by
one or more <replacedElement> objects all using the 'deletion' attribute.
|
static int |
COMP_20801
Error code 1020801:
A <port> object must point to another object; that is, a <port> object must
always have a value for one of the attributes 'comp:idRef', 'comp:unitRef', or
'comp:metaIdRef'.
|
static int |
COMP_20802
Error code 1020802:
A <port> object can only point to one other object; that is, a given <port>
object can only have a value for one of the attributes 'comp:idRef',
'comp:unitRef', or 'comp:metaIdRef'.
|
static int |
COMP_20803
Error code 1020803:
A <port> object must have a value for the required attribute 'comp:id', and one,
and only one, of the attributes 'comp:idRef', 'comp:unitRef', or
'comp:metaIdRef'.
|
static int |
COMP_20804
Error code 1020804:
Port definitions must be unique; that is, no two <port> objects in a given Model
may reference the same object in that Model.
|
static int |
COMP_20901
Error code 1020901:
A <deletion> object must point to another object; that is, a <deletion> object
must always have a value for one of the attributes 'comp:portRef', 'comp:idRef',
'comp:unitRef', or 'comp:metaIdRef' Reference: L3V1 Comp V1 Section 3.5.3
|
static int |
COMP_20902
Error code 1020902:
A <deletion> object can only point to one other object; that is, a given
<deletion> object can only have a value for one of the attributes
'comp:portRef', 'comp:idRef', 'comp:unitRef', or 'comp:metaIdRef' Reference:
L3V1 Comp V1 Section 3.5.3
|
static int |
COMP_20903
Error code 1020903:
A <deletion> object must have a value for one, and only one, of the attributes
'comp:portRef', 'comp:idRef', 'comp:unitRef', and 'comp:metaIdRef'.
|
static int |
COMP_21001
Error code 1021001:
A <replacedElement> object must point to another object; that is, a
<replacedElement> object must always have a value for one of the attributes
'comp:portRef', 'comp:idRef', 'comp:unitRef', 'comp:metaIdRef' or
'comp:deletion'.
|
static int |
COMP_21002
Error code 1021002:
A <replacedElement> object can only point to one other object; that is, a given
<replacedElement> object can only have a value for one of the attributes
'comp:portRef', 'comp:idRef', 'comp:unitRef', 'comp:metaIdRef' or
'comp:deletion'.
|
static int |
COMP_21003
Error code 1021003:
A <replacedElement> object must have a value for the required attribute
'comp:submodelRef', and a value for one, and only one, of the following
attributes: 'comp:portRef', 'comp:idRef', 'comp:unitRef', 'comp:metaIdRef', or
'comp:deletion'.
|
static int |
COMP_21004
Error code 1021004:
The value of a 'comp:submodelRef' attribute on a <replacedElement> object must
be the identifier of a <submodel> present in the <replacedElement> object's
parent Model.
|
static int |
COMP_21005
Error code 1021005:
The value of a 'comp:deletion' attribute on a <replacedElement> object must be
the identifier of a <deletion> present in the <replacedElement> object's parent
Model.
|
static int |
COMP_21006
Error code 1021006:
The value of a 'comp:conversionFactor' attribute on a <replacedElement> object
must be the identifier of a <parameter> present in the <replacedElement>
object's parent Model Reference: L3V1 Comp V1 Section 3.6.2
|
static int |
COMP_21010
Error code 1021010:
No two <replacedElement> objects in the same Model may reference the same object
unless that object is a <deletion> Reference: L3V1 Comp V1 Section 3.6.2
|
static int |
COMP_21011
Error code 1021011:
If a <replacedElement> uses the 'comp:deletion' attribute, then it should not
also use the 'comp:conversionFactor' attribute.
|
static int |
COMP_21101
Error code 1021101:
A <replacedBy> object must point to another object; that is, a <replacedBy>
object must always have a value for one of the attributes 'comp:portRef',
'comp:idRef', 'comp:unitRef' or 'comp:metaIdRef'.
|
static int |
COMP_21102
Error code 1021102:
A <replacedBy> object can only point to one other object; that is, a given
<replacedBy> object can only have a value for one of the attributes
'comp:portRef', 'comp:idRef', 'comp:unitRef', or 'comp:metaIdRef'.
|
static int |
COMP_21103
Error code 1021103:
A <replacedBy> object must have a value for the required attribute
'comp:submodelRef', and a value for one, and only one, of the following
attributes: 'comp:portRef', 'comp:idRef', 'comp:unitRef' or 'comp:metaIdRef'.
|
static int |
COMP_21104
Error code 1021104:
The value of a 'comp:submodelRef' attribute on a <replacedBy> object must be the
identifier of a <submodel> present in the <replacedBy> object's parent Model.
|
static int |
COMP_21201
Error code 1021201:
If one element replaces another, whether it is the target of a <replacedBy>
element, or whether it has a child <replacedElement>, the SBML class of the
replacement element must match the SBML class of the replaced element, with two
exceptions: an element of a derived class may replace an object of its base
class (for base classes other than SBase), and any SBML class with mathematical
meaning may replace a <parameter>.
|
static int |
COMP_21202
Error code 1021202:
If one element replaces another, whether it is the target of a <replacedBy>
element, or whether it has a child <replacedElement>, if the replaced element
has the 'id' attribute set, the replacement !element must also have the 'id'
attribute set.
|
static int |
COMP_21203
Error code 1021203:
If one element replaces another, whether it is the target of a <replacedBy>
element, or whether it has a child <replacedElement>, if the replaced element
has the 'metaid' attribute set, the replacement element must also have the
'metaid' attribute set.
|
static int |
COMP_21204
Error code 1021204:
If one element replaces another, whether it is the target of a <replacedBy>
element, or whether it has a child <replacedElement>, if the replaced element
has an identifier attribute from some other SBML package set, the replacement
element must also have that same identifier attribute set.
|
static int |
COMP_90101
Error code 1090101:
The external model referenced in this model could not be resolved.
|
static int |
COMP_90102
Error code 1090102:
The external document referenced in this model did not contain any models.
|
static int |
COMP_90103
Error code 1090103:
An external model definition referenced by an external model definition in this
model was itself unresolvable.
|
static int |
COMP_90104
Error code 1090104:
Errors arose during the attempt to flatten the model.
|
static int |
COMP_90105
Error code 1090105:
The interpretation the Hierarchical Model Composition constructs to produce a
kind of 'flattened' version of the model devoid of the comp package constructs
must produce a valid SBML Level 3 model.
|
static int |
COMP_90106
Error code 1090106:
Due to the need to instantiate models, modelDefinitions, submodels etc.
|
static int |
COMP_90107
Error code 1090107:
The CompFlatteningConverter has encountered a required package for which libSBML
does not recognize the information.
|
static int |
COMP_90108
Error code 1090108:
The CompFlatteningConverter has encountered an unrequired package for which
libSBML does not recognize the information.
|
static int |
COMP_90109
Error code 1090109:
The CompFlatteningConverter has encountered an unrequired package for which the
necessary routines to allow flattening have not yet been implemented.
|
static int |
COMP_90110
Error code 1090110:
The CompFlatteningConverter has encountered a required package for which the
necessary routines to allow flattening have not yet been implemented.
|
static int |
COMP_90111
Error code 1090111:
The CompFlatteningConverter has encountered an unknown reference which may be
due to the presence of an unknown package.
|
static int |
COMP_90112
Error code 1090112:
The software used to process this hierarchical model used the deprecated
function performDeletions to do so.
|
static int |
COMP_90113
Error code 1090113:
The software used to process this hierarchical model used the deprecated
function performReplacementsAndConversions to do so.
|
static int |
COMP_90114
Error code 1090114:
The model contained a deletion whose subelement was replaced.
|
static int |
COMP_90115
Error code 1090115:
The value of a 'comp:idRef' attribute on an <sBaseRef> object must be the
identifier of an object contained in (that is, within the SId namespace of) the
<model> referenced by that <sBaseRef>.
|
static int |
COMP_90116
Error code 1090116:
The value of a 'comp:metaIdRef' attribute on an <sBaseRef> object must be the
value of a 'comp:metaid' attribute on an element contained in the <model>
referenced by that <sBaseRef>.
|
static int |
CORE_00000
Error code 0:
Unrecognized error encountered internally.
|
static int |
CORE_00001
Error code 1:
Out of memory.
|
static int |
CORE_00002
Error code 2:
File unreadable.
|
static int |
CORE_00003
Error code 3:
File unwritable.
|
static int |
CORE_00004
Error code 4:
Error encountered while attempting file operation.
|
static int |
CORE_00005
Error code 5:
Network access error.
|
static int |
CORE_00101
Error code 101:
Internal XML parser state error.
|
static int |
CORE_00102
Error code 102:
XML parser returned an unrecognized error code.
|
static int |
CORE_00103
Error code 103:
Character transcoder error.
|
static int |
CORE_01001
Error code 1001:
Missing XML declaration at beginning of XML input.
|
static int |
CORE_01002
Error code 1002:
Missing encoding attribute in XML declaration.
|
static int |
CORE_01003
Error code 1003:
Invalid or unrecognized XML declaration or XML encoding.
|
static int |
CORE_01004
Error code 1004:
Invalid, malformed or unrecognized XML DOCTYPE declaration.
|
static int |
CORE_01005
Error code 1005:
Invalid character in XML content.
|
static int |
CORE_01006
Error code 1006:
XML content is not well-formed.
|
static int |
CORE_01007
Error code 1007:
Unclosed XML token.
|
static int |
CORE_01008
Error code 1008:
XML construct is invalid or not permitted.
|
static int |
CORE_01009
Error code 1009:
Element tag mismatch or missing tag.
|
static int |
CORE_01010
Error code 1010:
Duplicate XML attribute.
|
static int |
CORE_01011
Error code 1011:
Undefined XML entity.
|
static int |
CORE_01012
Error code 1012:
Invalid, malformed or unrecognized XML processing instruction.
|
static int |
CORE_01013
Error code 1013:
Invalid or undefined XML namespace prefix.
|
static int |
CORE_01014
Error code 1014:
Invalid XML namespace prefix value.
|
static int |
CORE_01015
Error code 1015:
Missing a required XML attribute.
|
static int |
CORE_01016
Error code 1016:
Data type mismatch for the value of an attribute.
|
static int |
CORE_01017
Error code 1017:
Invalid UTF8 content.
|
static int |
CORE_01018
Error code 1018:
Missing or improperly formed attribute value.
|
static int |
CORE_01019
Error code 1019:
Invalid or unrecognizable attribute value.
|
static int |
CORE_01020
Error code 1020:
Invalid, unrecognized or malformed attribute.
|
static int |
CORE_01021
Error code 1021:
Element either not recognized or not permitted.
|
static int |
CORE_01022
Error code 1022:
Badly formed XML comment.
|
static int |
CORE_01023
Error code 1023:
XML declaration not permitted in this location.
|
static int |
CORE_01024
Error code 1024:
Reached end of input unexpectedly.
|
static int |
CORE_01025
Error code 1025:
Value is invalid for XML ID, or has already been used.
|
static int |
CORE_01026
Error code 1026:
XML ID value was never declared.
|
static int |
CORE_01027
Error code 1027:
Unable to interpret content.
|
static int |
CORE_01028
Error code 1028:
Bad XML document structure.
|
static int |
CORE_01029
Error code 1029:
Encountered invalid content after expected content.
|
static int |
CORE_01030
Error code 1030:
Expected to find a quoted string.
|
static int |
CORE_01031
Error code 1031:
An empty value is not permitted in this context.
|
static int |
CORE_01032
Error code 1032:
Invalid or unrecognized number.
|
static int |
CORE_01033
Error code 1033:
Colon characters are invalid in this context.
|
static int |
CORE_01034
Error code 1034:
One or more expected elements are missing.
|
static int |
CORE_01035
Error code 1035:
Main XML content is empty.
|
static int |
CORE_09999
Error code 9999:
|
static int |
CORE_10000
Error code 10000:
Unrecognized error encountered by libSBML
|
static int |
CORE_10101
Error code 10101:
An SBML XML file must use UTF-8 as the character encoding.
|
static int |
CORE_10102
Error code 10102:
An SBML XML document must not contain undefined elements or attributes in the
SBML namespace.
|
static int |
CORE_10103
Error code 10103:
An SBML XML document must conform to the XML Schema for the corresponding SBML
Level, Version and Release.
|
static int |
CORE_10104
Error code 10104:
An SBML document must conform to the rules of XML well-formedness defined in the
XML 1.0 specification.
|
static int |
CORE_10201
Error code 10201:
All MathML content in SBML must appear within a <math> element, and the <math>
element must be either explicitly or implicitly in the XML namespace
"http://www.w3.org/1998/Math/MathML".
|
static int |
CORE_10202
Error code 10202:
The only permitted MathML 2.0 elements in SBML Level 2 are the following: <cn>,
<ci>, <csymbol>, <sep>, <apply>, <piecewise>, <piece>, <otherwise>, <eq>, <neq>,
<gt>, <lt>, <geq>, <leq>, <plus>, <minus>, <times>, <divide>, <power>, <root>,
<abs>, <exp>, <ln>, <log>, <floor>, <ceiling>, <factorial>, <and>, <or>, <xor>,
<not>, <degree>, <bvar>, <logbase>, <sin>, <cos>, <tan>, <sec>, <csc>, <cot>,
<sinh>, <cosh>, <tanh>, <sech>, <csch>, <coth>, <arcsin>, <arccos>, <arctan>,
<arcsec>, <arccsc>, <arccot>, <arcsinh>, <arccosh>, <arctanh>, <arcsech>,
<arccsch>, <arccoth>, <true>, <false>, <notanumber>, <pi>, <infinity>,
<exponentiale>, <semantics>, <annotation>, and <annotation-xml>.
|
static int |
CORE_10203
Error code 10203:
In the SBML subset of MathML 2.0, the MathML attribute 'encoding' is only
permitted on <csymbol>.
|
static int |
CORE_10204
Error code 10204:
In the SBML subset of MathML 2.0, the MathML attribute 'definitionURL' is only
permitted on <csymbol>, <semantics> or <ci> (Level 2 Version 5 and Level 3
only).
|
static int |
CORE_10205
Error code 10205:
In SBML Level 2, the only values permitted for 'definitionURL' on a <csymbol>
element are "http://www.sbml.org/sbml/symbols/time" and
"http://www.sbml.org/sbml/symbols/delay".
|
static int |
CORE_10206
Error code 10206:
In the SBML subset of MathML 2.0, the MathML attribute 'type' is only permitted
on the <cn> construct.
|
static int |
CORE_10207
Error code 10207:
The only permitted values for the 'type' attribute on MathML <cn> elements are
'e-notation', 'real', 'integer', and 'rational'.
|
static int |
CORE_10208
Error code 10208:
MathML <lambda> elements are only permitted as the first element inside the
'math' element of a <functionDefinition> or as the first element of a semantics
element immediately inside inside the math element of a <functionDefinition>;
they may not be used elsewhere in an SBML model.
|
static int |
CORE_10209
Error code 10209:
The arguments of the MathML logical operators <and>, <or>, <xor>, and <not> must
have Boolean values.
|
static int |
CORE_10210
Error code 10210:
The arguments to the following MathML constructs must have a numeric type:
<plus>, <minus>, <times>, <divide>, <power>, <root>, <abs>, <exp>, <ln>, <log>,
<floor>, <ceiling>, <factorial>, <sin>, <cos>, <tan>, <sec>, <csc>, <cot>,
<sinh>, <cosh>, <tanh>, <sech>, <csch>, <coth>, <arcsin>, <arccos>, <arctan>,
<arcsec>, <arccsc>, <arccot>, <arcsinh>, <arccosh>, <arctanh>, <arcsech>,
<arccsch>, <arccoth>.
|
static int |
CORE_10211
Error code 10211:
The values of all arguments to <eq> and <neq> operators must have the same type
(either all Boolean or all numeric).
|
static int |
CORE_10212
Error code 10212:
The types of values within <piecewise> operators must all be consistent: the set
of expressions that make up the first arguments of the <piece> and <otherwise>
operators within the same <piecewise> operator should all return values of the
same type.
|
static int |
CORE_10213
Error code 10213:
The second argument of a MathML <piece> operator must have a Boolean value.
|
static int |
CORE_10214
Error code 10214:
Outside of a <functionDefinition>, if a <ci> element is the first element within
a MathML <apply>, then the <ci>'s value can only be chosen from the set of
identifiers of <functionDefinition>s defined in the SBML model.
|
static int |
CORE_10215
Error code 10215:
Outside of a <functionDefinition>, if a <ci> element is not the first element
within a MathML <apply>, then the <ci>'s value can only be chosen from the set
of identifiers of <species>, <compartment>, <parameter>, <reaction>, or (in
Level 3) <speciesReference> objects defined in the SBML model.
|
static int |
CORE_10216
Error code 10216:
The 'id' value of a <parameter> defined within a <kineticLaw> can only be used
in <ci> elements within the MathML content of that same <kineticLaw>; the
identifier is not visible to other parts of the model.
|
static int |
CORE_10217
Error code 10217:
The MathML formulas in the following elements must yield numeric expressions:
<math> in <kineticLaw>, <stoichiometryMath> in <speciesReference>, <math> in
<initialAssignment>, <math> in <assignmentRule>, <math> in <rateRule>, <math> in
<algebraicRule>, and <delay> in <event>, and <math> in <eventAssignment>.
|
static int |
CORE_10218
Error code 10218:
A MathML operator must be supplied the number of arguments appropriate for that
operator.
|
static int |
CORE_10219
Error code 10219:
The number of arguments used in a call to a function defined by a
<functionDefinition> must equal the number of arguments accepted by that
function, or in other words, the number of <bvar> elements inside the <lambda>
element of the function definition.
|
static int |
CORE_10220
Error code 10220:
The SBML attribute 'units' may only be added to MathML <cn> elements; no other
MathML elements are permitted to have the 'units' attribute.
|
static int |
CORE_10221
Error code 10221:
The value of the SBML attribute 'units' on a MathML <cn> element must be chosen
from either the set of identifiers of UnitDefinition objects in the model, or
the set of base units defined by SBML.
|
static int |
CORE_10222
Error code 10222:
The value of a <ci> element may not be the identifier of a <compartment> with a
'spatialDimensions' value of 0.
|
static int |
CORE_10301
Error code 10301:
The value of the 'id' field on every instance of the following type of object in
a model must be unique: <model>, <functionDefinition>, <compartmentType>,
<compartment>, <speciesType>, <species>, <reaction>, <speciesReference>,
<modifierSpeciesReference>, <event>, and model-wide <parameter>s.
|
static int |
CORE_10302
Error code 10302:
The value of the 'id' field of every <unitDefinition> must be unique across the
set of all <unitDefinition>s in the entire model.
|
static int |
CORE_10303
Error code 10303:
The value of the 'id' field of each parameter defined locally within a
<kineticLaw> must be unique across the set of all such parameter definitions in
that <kineticLaw>.
|
static int |
CORE_10304
Error code 10304:
The value of the 'variable' field in all <assignmentRule> and <rateRule>
definitions must be unique across the set of all such rule definitions in a
model.
|
static int |
CORE_10305
Error code 10305:
In each <event>, the value of the 'variable' field within every
<eventAssignment> definition must be unique across the set of all
<eventAssignment>s within that <event>.
|
static int |
CORE_10306
Error code 10306:
An identifier used as the value of 'variable' in an <eventAssignment> cannot
also appear as the value of 'variable' in an <assignmentRule>.
|
static int |
CORE_10307
Error code 10307:
Every 'metaid' attribute value must be unique across the set of all 'metaid'
values in a model.
|
static int |
CORE_10308
Error code 10308:
The value of an 'sboTerm' attribute must have the data type 'SBOTerm', which is
a string consisting of the characters 'S', 'B', 'O', ':' followed by exactly
seven digits.
|
static int |
CORE_10309
Error code 10309:
The syntax of 'metaid' attribute values must conform to the syntax of the XML
type 'ID'.
|
static int |
CORE_10310
Error code 10310:
The syntax of 'id' attribute values must conform to the syntax of the SBML type
'SId'.
|
static int |
CORE_10311
Error code 10311:
The syntax of unit identifiers (i.e., the values of the 'id' attribute on
UnitDefinition, the 'units' attribute on Compartment, the 'units' attribute on
Parameter, and the 'substanceUnits' attribute on Species) must conform to the
syntax of the SBML type UnitSId.
|
static int |
CORE_10312
Error code 10312:
Message Reference: L3V1 Section 3.1.1
|
static int |
CORE_10313
Error code 10313:
Unit identifier references (i.e the 'units' attribute on <Compartment>, the
'units' attribute on <Parameter>, and the 'substanceUnits' attribute on
<Species>) must be the identifier of a <UnitDefinition> in the <Model>, or the
identifier of a predefined unit in SBML.
|
static int |
CORE_10401
Error code 10401:
Every top-level element within an annotation element must have a namespace
declared.
|
static int |
CORE_10402
Error code 10402:
There cannot be more than one top-level element using a given namespace inside a
given annotation element.
|
static int |
CORE_10403
Error code 10403:
Top-level elements within an annotation element cannot use any SBML namespace,
whether explicitly (by declaring the namespace to be one of the URIs
"http://www.sbml.org/sbml/level1", "http://www.sbml.org/sbml/level2",
"http://www.sbml.org/sbml/level2/version2", or
"http://www.sbml.org/sbml/level2/version3", or
"http://www.sbml.org/sbml/level2/version4", or
"http://www.sbml.org/sbml/level2/version5" or
"http://www.sbml.org/sbml/level3/version1/core"), or implicitly (by failing to
declare any namespace).
|
static int |
CORE_10404
Error code 10404:
A given SBML object may contain at most one <annotation> element.
|
static int |
CORE_10501
Error code 10501:
The units of the expressions used as arguments to a function call must match the units expected for
the arguments of that function.
|
static int |
CORE_10503
Error code 10503:
The unit of measurement associated with the mathematical formula in the MathML
math element of every KineticLaw object in a model should be identical to all
KineticLaw objects in the model.
|
static int |
CORE_10511
Error code 10511:
When the 'variable' in an <assignmentRule> refers to a <compartment>, the units
of the rule's right-hand side are expected to be consistent with the units of
that compartment's size.
|
static int |
CORE_10512
Error code 10512:
When the 'variable' in an <assignmentRule> refers to a <species>, the units of
the rule's right-hand side are expected to be consistent with the units of the
species' quantity.
|
static int |
CORE_10513
Error code 10513:
When the 'variable' in an <assignmentRule> refers to a <parameter>, the units of
the rule's right-hand side are expected to be consistent with the units declared
for that parameter.
|
static int |
CORE_10514
Error code 10514:
When the value of the attribute variable in an AssignmentRule object refers to a
SpeciesReference object, the unit of measurement associated with the rule's
right-hand side should be consistent with the unit of stoichiometry, that is,
dimensionless.
|
static int |
CORE_10521
Error code 10521:
When the 'variable' in an <initialAssignment> refers to a <compartment>, the
units of the <initialAssignment>'s <math> expression are expected to be
consistent with the units of that compartment's size.
|
static int |
CORE_10522
Error code 10522:
When the 'variable' in an <initialAssignment> refers to a <species>, the units
of the <initialAssignment>'s <math> expression are expected to be consistent
with the units of that species' quantity.
|
static int |
CORE_10523
Error code 10523:
When the 'variable' in an <initialAssignment> refers to a <parameter>, the units
of the <initialAssignment>'s <math> expression are expected to be consistent
with the units declared for that parameter.
|
static int |
CORE_10524
Error code 10524:
When the value of the attribute variable in an InitialAssignment object refers
to a SpeciesReference object, the unit of measurement associated with the
InitialAssignment's math expression should be consistent with the unit of
stoichiometry, that is, dimensionless.
|
static int |
CORE_10531
Error code 10531:
When the 'variable' in a <rateRule> definition refers to a <compartment>, the
units of the rule's right-hand side are expected to be of the form _x per time_,
where _x_ is either the 'units' in that <compartment> definition, or (in the
absence of explicit units declared for the compartment size) the default units
for that compartment, and _time_ refers to the units of time for the model.
|
static int |
CORE_10532
Error code 10532:
When the 'variable' in a <rateRule> definition refers to a <species>, the units
of the rule's right-hand side are expected to be of the form _x per time_, where
_x_ is the units of that species' quantity, and _time_ refers to the units of
time for the model.
|
static int |
CORE_10533
Error code 10533:
When the 'variable' in a <rateRule> definition refers to a <parameter>, the
units of the rule's right-hand side are expected to be of the form _x per time_,
where _x_ is the 'units' in that <parameter> definition, and _time_ refers to
the units of time for the model.
|
static int |
CORE_10534
Error code 10534:
When the value of the attribute variable in a RateRule object refers to a
SpeciesReference object, the unit of measurement associated with the RateRule's
math expression should be consistent with {unit derived from
dimensionless}/{unit of time}.
|
static int |
CORE_10541
Error code 10541:
The units of the 'math' formula in a <kineticLaw> definition are expected to be
the equivalent of _substance per time_.
|
static int |
CORE_10542
Error code 10542:
For every Species object produced or consumed in a reaction (that is, referenced
by a SpeciesReference object), the unit of measurement of the species' substance
should be consistent with the unit of extent for the model times the unit of the
conversion factor for that species.
|
static int |
CORE_10551
Error code 10551:
When a value for <delay> is given in a <event> definition, the units of the
delay formula are expected to correspond to either the value of 'timeUnits' in
the <event> or (if no 'timeUnits' are given), the model's default units of time.
|
static int |
CORE_10561
Error code 10561:
When the 'variable' in an <eventAssignment> refers to a <compartment>, the units
of the <eventAssignment>'s <math> expression are expected to be consistent with
the units of that compartment's size.
|
static int |
CORE_10562
Error code 10562:
When the 'variable' in an <eventAssignment> refers to a <species>, the units of
the <eventAssignment>'s <math> expression are expected to be consistent with the
units of the species' quantity.
|
static int |
CORE_10563
Error code 10563:
When the 'variable' in an <eventAssignment> refers to a <parameter>, the units
of the <eventAssignment>'s <math> expression are expected to be consistent with
the units declared for that parameter.
|
static int |
CORE_10564
Error code 10564:
When the value of the attribute variable of an EventAssignment object is the
identifier of a SpeciesReference object, the unit of measurement associated with
the EventAssignment's math expression should be consistent with the unit of
stoichiometry, i.e., dimensionless.
|
static int |
CORE_10565
Error code 10565:
In an Event object, the unit of measurement associated with a Priority object's
<math> expression object should be 'dimensionless'.
|
static int |
CORE_10599
Error code 10599:
|
static int |
CORE_10601
Error code 10601:
The system of equations created from an SBML model must not be overdetermined.
|
static int |
CORE_10701
Error code 10701:
The value of the 'sboTerm' attribute on a <model> is expected to be an SBO
identifier (http://www.biomodels.net/SBO/).
|
static int |
CORE_10702
Error code 10702:
The value of the 'sboTerm' attribute on a <functionDefinition> is expected to be
an SBO identifier (http://www.biomodels.net/SBO/) referring to a mathematical
expression (i.e., terms derived from SBO:0000064, "mathematical expression").
|
static int |
CORE_10703
Error code 10703:
The value of the 'sboTerm' attribute on a <parameter> is expected to be an SBO
identifier (http://www.biomodels.net/SBO/) referring to a quantitative parameter
defined in SBO (i.e., terms derived from SBO:0000002, "quantitative systems
description parameter").
|
static int |
CORE_10704
Error code 10704:
The value of the 'sboTerm' attribute on an <initialAssignment> is expected to be
an SBO identifier (http://www.biomodels.net/SBO/) referring to a mathematical
expression (i.e., terms derived from SBO:0000064, "mathematical expression").
|
static int |
CORE_10705
Error code 10705:
The value of the 'sboTerm' attribute on a rule is expected to be an SBO
identifier (http://www.biomodels.net/SBO/) referring to a mathematical
expression (i.e., terms derived from SBO:0000064, "mathematical expression").
|
static int |
CORE_10706
Error code 10706:
The value of the 'sboTerm' attribute on a <constraint> is expected to be an SBO
identifier (http://www.biomodels.net/SBO/) referring to a mathematical
expression (i.e., terms derived from SBO:0000064, "mathematical expression").
|
static int |
CORE_10707
Error code 10707:
The value of the 'sboTerm' attribute on a <reaction> is expected to be an SBO
identifier (http://www.biomodels.net/SBO/) referring to an occurring entity
representation defined in SBO (i.e., terms derived from SBO:0000231, "occurring
entity representation").
|
static int |
CORE_10708
Error code 10708:
The value of the 'sboTerm' attribute on a <speciesReference> or
<modifierSpeciesReference> is expected to be an SBO identifier
(http://www.biomodels.net/SBO/) referring to a participant role.
|
static int |
CORE_10709
Error code 10709:
The value of the 'sboTerm' attribute on a <kineticLaw> is expected to be an SBO
identifier (http://www.biomodels.net/SBO/) referring rate law defined in SBO
(i.e., terms derived from SBO:0000001, "rate law").
|
static int |
CORE_10710
Error code 10710:
The value of the 'sboTerm' attribute on an <event> is expected to be an SBO
identifier (http://www.biomodels.net/SBO/) referring to an occurring entity
representation defined in SBO (i.e., terms derived from SBO:0000231, "occurring
entity representation").
|
static int |
CORE_10711
Error code 10711:
The value of the 'sboTerm' attribute on an <eventAssignment> is expected to be
an SBO identifier (http://www.biomodels.net/SBO/) referring to a mathematical
expression (i.e., terms derived from SBO:0000064, "mathematical expression").
|
static int |
CORE_10712
Error code 10712:
The value of the 'sboTerm' attribute on a <compartment> is expected to be an SBO
identifier (http://www.biomodels.net/SBO/).
|
static int |
CORE_10713
Error code 10713:
The value of the 'sboTerm' attribute on a <species> is expected to be an SBO
identifier (http://www.biomodels.net/SBO/).
|
static int |
CORE_10714
Error code 10714:
The value of the 'sboTerm' attribute on a <compartmentType> is expected to be an
SBO identifier (http://www.biomodels.net/SBO/).
|
static int |
CORE_10715
Error code 10715:
The value of the 'sboTerm' attribute on a <speciesType> is expected to be an SBO
identifier (http://www.biomodels.net/SBO/).
|
static int |
CORE_10716
Error code 10716:
The value of the 'sboTerm' attribute on a <trigger> is expected to be an SBO
identifier (http://www.biomodels.net/SBO/) referring to a mathematical
expression (i.e., terms derived from SBO:0000064, "mathematical expression").
|
static int |
CORE_10717
Error code 10717:
The value of the 'sboTerm' attribute on a <delay> is expected to be an SBO
identifier (http://www.biomodels.net/SBO/) referring to a mathematical
expression (i.e., terms derived from SBO:0000064, "mathematical expression").
|
static int |
CORE_10718
Error code 10718:
[Although SBML Level 3 Version 1 does not explicitly define the following as an
error, other Levels and/or Versions of SBML do.] The value of the 'sboTerm'
attribute on a <localParameter> is expected to be an SBO identifier
(http://www.biomodels.net/SBO/) referring to a quantitative parameter (i.e.,
terms derived from SBO:0000002, "quantitive systems description parameter").
|
static int |
CORE_10801
Error code 10801:
The contents of the <notes> element must be explicitly placed in the XHTML XML
namespace.
|
static int |
CORE_10802
Error code 10802:
The contents of the <notes> element must not contain an XML declaration (i.e., a
string of the form "<?xml version="1.0" encoding="UTF-8"?>" or similar).
|
static int |
CORE_10803
Error code 10803:
The contents of the <notes> element must not contain an XML DOCTYPE declaration
(i.e., a string beginning with the characters "<!DOCTYPE".
|
static int |
CORE_10804
Error code 10804:
The XHTML content inside a <notes> element can only take one of the following
general forms: (1) a complete XHTML document beginning with the element <html>
and ending with </html>; (2) the "body" portion of a document beginning with the
element <body> and ending with </body>; or (3) XHTML content that is permitted
within a <body> ...
|
static int |
CORE_10805
Error code 10805:
A given SBML object may contain at most one <notes> element.
|
static int |
CORE_20101
Error code 20101:
The <sbml> container element must declare the XML Namespace for SBML, and this
declaration must be consistent with the values of the 'level' and 'version'
attributes on the <sbml> element.
|
static int |
CORE_20102
Error code 20102:
The <sbml> container element must declare the SBML Level using the attribute
'level', and this declaration must be consistent with the XML Namespace declared
for the <sbml> element.
|
static int |
CORE_20103
Error code 20103:
The <sbml> container element must declare the SBML Version using the attribute
'version', and this declaration must be consistent with the XML Namespace
declared for the <sbml> element.
|
static int |
CORE_20104
Error code 20104:
The <sbml> container element must declare the XML Namespace for any SBML Level 3
packages used within the SBML document.
|
static int |
CORE_20105
Error code 20105:
The attribute 'level' on the <sbml> container element must have a value of type
'positiveInteger'.
|
static int |
CORE_20106
Error code 20106:
The attribute 'version' on the <sbml> container element must have a value of
type 'positiveInteger'.
|
static int |
CORE_20108
Error code 20108:
The <sbml> object may only have the optional attributes 'metaid' and 'sboTerm'.
|
static int |
CORE_20109
Error code 20109:
It is not possible to use SBML L3 packages with earlier levels of SBML.
|
static int |
CORE_20201
Error code 20201:
An SBML document must contain a <model> element.
|
static int |
CORE_20202
Error code 20202:
The order of subelements within a <model> element must be the following (where
any one may be optional, but the ordering must be maintained):
<listOfFunctionDefinitions>, <listOfUnitDefinitions>, <listOfCompartmentTypes>,
<listOfSpeciesTypes>, <listOfCompartments>, <listOfSpecies>, <listOfParameters>,
<listOfInitialAssignments>, <listOfRules>, <listOfConstraints>,
<listOfReactions> and <listOfEvents>.
|
static int |
CORE_20203
Error code 20203:
The <listOf___> containers in a <model> are optional, but if present, the lists
cannot be empty.
|
static int |
CORE_20204
Error code 20204:
If a model defines any species, then the model must also define at least one
compartment.
|
static int |
CORE_20205
Error code 20205:
There may be at most one instance of each of the following kind of element in a
<model> object: ListOfFunctionDefinitions, ListOfUnitDefinitions,
ListOfCompartments, ListOfSpecies, ListOfParameters, ListOfInitialAssignments,
ListOfRules, ListOfConstraints, ListOfReactions and ListOfEvents.
|
static int |
CORE_20206
Error code 20206:
Apart from the general Notes and Annotation subobjects permitted on all SBML
components, a ListOfFunctionDefinitions container object may only contain
FunctionDefinition objects.
|
static int |
CORE_20207
Error code 20207:
Apart from the general Notes and Annotation subobjects permitted on all SBML
components, a ListOfUnitDefinitions container object may only contain
UnitDefinition objects.
|
static int |
CORE_20208
Error code 20208:
Apart from the general Notes and Annotation subobjects permitted on all SBML
components, a ListOfCompartments container object may only contain Compartment
objects.
|
static int |
CORE_20209
Error code 20209:
Apart from the general Notes and Annotation subobjects permitted on all SBML
components, a ListOfSpecies container object may only contain Species objects.
|
static int |
CORE_20210
Error code 20210:
Apart from the general Notes and Annotation subobjects permitted on all SBML
components, a ListOfParameters container object may only contain Parameter
objects.
|
static int |
CORE_20211
Error code 20211:
Apart from the general Notes and Annotation subobjects permitted on all SBML
components, a ListOfInitialAssignments container object may only contain
InitialAssignment objects.
|
static int |
CORE_20212
Error code 20212:
Apart from the general Notes and Annotation subobjects permitted on all SBML
components, a ListOfRules container object may only contain Rule objects.
|
static int |
CORE_20213
Error code 20213:
Apart from the general Notes and Annotation subobjects permitted on all SBML
components, a ListOfConstraints container object may only contain Constraint
objects.
|
static int |
CORE_20214
Error code 20214:
Apart from the general Notes and Annotation subobjects permitted on all SBML
components, a ListOfReactions container object may only contain Reaction
objects.
|
static int |
CORE_20215
Error code 20215:
Apart from the general Notes and Annotation subobjects permitted on all SBML
components, a ListOfEvents container object may only contain Event objects.
|
static int |
CORE_20216
Error code 20216:
The value of the attribute 'conversionFactor' on a Model object must be the
identifier of an existing Parameter object defined in the Model object's
ListOfParameters.
|
static int |
CORE_20217
Error code 20217:
The value of the attribute 'timeUnits' on a Model object should be either the
units 'second', 'dimensionless', or the identifier of a UnitDefinition object
based on these units.
|
static int |
CORE_20218
Error code 20218:
The value of the attribute 'volumeUnits' on a Model object should be either the
units 'litre', 'dimensionless', or the identifier of a UnitDefinition object
based on these units or a unit derived from 'metre' (with an exponent of '3').
|
static int |
CORE_20219
Error code 20219:
The value of the attribute 'areaUnits' on a Model object should be either
'dimensionless' or the identifier of a UnitDefinition object based on
'dimensionless' or a unit derived from 'metre' (with an exponent of '2').
|
static int |
CORE_20220
Error code 20220:
The value of the attribute 'lengthUnits' on a Model object should be either the
units 'metre', 'dimensionless', or the identifier of a UnitDefinition object
based on these units.
|
static int |
CORE_20221
Error code 20221:
The value of the attribute extentUnits on a Model object should be either the
units 'mole', 'item', 'avogadro', 'dimensionless', 'kilogram', 'gram', or the
identifier of a UnitDefinition object based on these units.
|
static int |
CORE_20222
Error code 20222:
A Model object may only have the following attributes, all of which are
optional: 'metaid', 'sboTerm', 'id', 'name', 'substanceUnits', 'timeUnits',
'volumeUnits', 'areaUnits', 'lengthUnits', 'extentUnits' and 'conversionFactor'.
|
static int |
CORE_20223
Error code 20223:
A ListOfFunctionDefinitions object may have the optional attributes 'metaid' and
'sboTerm'.
|
static int |
CORE_20224
Error code 20224:
A ListOfUnitDefinitions object may have the optional attributes 'metaid' and
'sboTerm'.
|
static int |
CORE_20225
Error code 20225:
A ListOfCompartments object may have the optional attributes 'metaid' and
'sboTerm'.
|
static int |
CORE_20226
Error code 20226:
A ListOfSpecies object may have the optional attributes 'metaid' and 'sboTerm'.
|
static int |
CORE_20227
Error code 20227:
A ListOfParameters object may have the optional attributes 'metaid' and
'sboTerm'.
|
static int |
CORE_20228
Error code 20228:
A ListOfInitialAssignments object may have the optional attributes 'metaid' and
'sboTerm'.
|
static int |
CORE_20229
Error code 20229:
A ListOfRules object may have the optional attributes 'metaid' and 'sboTerm'.
|
static int |
CORE_20230
Error code 20230:
A ListOfConstraints object may have the optional attributes 'metaid' and
'sboTerm'.
|
static int |
CORE_20231
Error code 20231:
A ListOfReactions object may have the optional attributes 'metaid' and
'sboTerm'.
|
static int |
CORE_20232
Error code 20232:
A ListOfEvents object may have the optional attributes 'metaid' and 'sboTerm'.
|
static int |
CORE_20233
Error code 20233:
[Although SBML Level 3 Version 1 does not explicitly define the following as an
error, other Levels and/or Versions of SBML do.] The value of the attribute
substanceUnits on a Model object should be either the units 'mole', 'item',
'avogadro', 'dimensionless', 'kilogram', 'gram', or the identifier of a
UnitDefinition object based on these units.
|
static int |
CORE_20301
Error code 20301:
The top-level element within <math> in a <functionDefinition> is restricted.
|
static int |
CORE_20302
Error code 20302:
Inside the <lambda> of a <functionDefinition>, if a <ci> element is the first
element within a MathML <apply>, then the <ci>'s value can only be chosen from
the set of identifiers of other SBML <functionDefinition>s defined prior to that
point in the SBML model.
|
static int |
CORE_20303
Error code 20303:
Inside the <lambda> of a <functionDefinition>, the identifier of that
<functionDefinition> cannot appear as the value of a <ci> element.
|
static int |
CORE_20304
Error code 20304:
Inside the <lambda> of a <functionDefinition>, if a <ci> element is not the
first element within a MathML <apply>, then the <ci>'s value can only be the
value of a <bvar> element declared in that <lambda>.
|
static int |
CORE_20305
Error code 20305:
The value type returned by a <functionDefinition>'s <lambda> must be either
Boolean or numeric.
|
static int |
CORE_20306
Error code 20306:
A FunctionDefinition object must contain exactly one MathML math element.
|
static int |
CORE_20307
Error code 20307:
FunctionDefinition object must have the required attribute 'id', and may have
the optional attributes 'metaid', 'sboTerm' and 'name'.
|
static int |
CORE_20401
Error code 20401:
The value of the 'id' attribute in a <unitDefinition> must be of type 'UnitSId'
and not be identical to any unit predefined in SBML.
|
static int |
CORE_20402
Error code 20402:
Redefinitions of the built-in unit 'substance' are restricted.
|
static int |
CORE_20403
Error code 20403:
Redefinitions of the built-in unit 'length' are restricted.
|
static int |
CORE_20404
Error code 20404:
Redefinitions of the built-in unit 'area' are restricted.
|
static int |
CORE_20405
Error code 20405:
Redefinitions of the built-in unit 'time' are restricted.
|
static int |
CORE_20406
Error code 20406:
Redefinitions of the built-in unit 'volume' are restricted.
|
static int |
CORE_20407
Error code 20407:
If a <unitDefinition> for 'volume' simplifies to a <unit> in which the 'kind'
attribute value is 'litre', then its 'exponent' attribute value must be '1'.
|
static int |
CORE_20408
Error code 20408:
If a <unitDefinition> for 'volume' simplifies to a <unit> in which the 'kind'
attribute value is 'metre', then its 'exponent' attribute value must be '3'.
|
static int |
CORE_20409
Error code 20409:
The <listOfUnits> container in a <unitDefinition> cannot be empty.
|
static int |
CORE_20410
Error code 20410:
The value of the 'kind' attribute of a <unit> can only be one of the base units
enumerated by 'UnitKind'; that is, the SBML unit system is not hierarchical and
user-defined units cannot be defined using other user-defined units.
|
static int |
CORE_20411
Error code 20411:
The 'offset' attribute on <unit> previously available in SBML Level 2 Version 1,
has been removed as of SBML Level 2 Version 2.
|
static int |
CORE_20412
Error code 20412:
The predefined unit 'Celsius', previously available in SBML Level 1 and Level 2
Version 1, has been removed as of SBML Level 2 Version 2.
|
static int |
CORE_20413
Error code 20413:
The ListOfUnits container object in a UnitDefinition object is optional, but if
present, it must not be empty.
|
static int |
CORE_20414
Error code 20414:
There may be at most one ListOfUnits container objects in a UnitDefinition
object.
|
static int |
CORE_20415
Error code 20415:
Apart from the general Notes and Annotation subobjects permitted on all SBML
components, a ListOfUnits container object may only contain Unit objects.
|
static int |
CORE_20419
Error code 20419:
A UnitDefinition object must have the required attribute 'id' and may have the
optional attributes 'metaid', 'sboTerm' and 'name'.
|
static int |
CORE_20420
Error code 20420:
A ListOfUnits object may have the optional attributes 'metaid' and 'sboTerm'.
|
static int |
CORE_20421
Error code 20421:
A Unit object must have the required attributes 'kind', 'exponent', 'scale' and
'multiplier', and may have the optional attributes 'metaid' and 'sboTerm'.
|
static int |
CORE_20501
Error code 20501:
The size of a <compartment> must not be set if the compartment's
'spatialDimensions' attribute has value '0'.
|
static int |
CORE_20502
Error code 20502:
If a <compartment> definition has a 'spatialDimensions' value of '0', then its
'units' attribute must not be set.
|
static int |
CORE_20503
Error code 20503:
If a <compartment> definition has a 'spatialDimensions' value of '0', then its
'constant' attribute value must either default to or be set to 'true'.
|
static int |
CORE_20504
Error code 20504:
The 'outside' attribute value of a <compartment> must be the identifier of
another <compartment> defined in the model.
|
static int |
CORE_20505
Error code 20505:
A <compartment> may not enclose itself through a chain of references involving
the 'outside' field.
|
static int |
CORE_20506
Error code 20506:
The 'outside' attribute value of a <compartment> cannot be a compartment whose
'spatialDimensions' value is '0', unless both compartments have
'spatialDimensions'='0'.
|
static int |
CORE_20507
Error code 20507:
The value of the 'units' attribute on a <compartment> having 'spatialDimensions'
of '1' is restricted.
|
static int |
CORE_20508
Error code 20508:
The value of the 'units' attribute on a <compartment> having 'spatialDimensions'
of '2' is restricted.
|
static int |
CORE_20509
Error code 20509:
The value of the 'units' attribute on a <compartment> having 'spatialDimensions'
of '3' is restricted.
|
static int |
CORE_20510
Error code 20510:
If the 'compartmentType' attribute is given a value in a <compartment>
definition, it must contain the identifier of an existing <compartmentType>.
|
static int |
CORE_20511
Error code 20511:
If the attribute 'units' on a Compartment object having a 'spatialDimensions'
attribute value of '1' has not been set, then the unit of measurement associated
with the compartment's size is determined by the value of the enclosing Model
object's 'lengthUnits' attribute.
|
static int |
CORE_20512
Error code 20512:
If the attribute 'units' on a Compartment object having a 'spatialDimensions'
attribute value of '2' has not been set, then the unit of measurement associated
with the compartment's size is determined by the value of the enclosing Model
object's 'areaUnits' attribute.
|
static int |
CORE_20513
Error code 20513:
If the attribute 'units' on a Compartment object having a 'spatialDimensions'
attribute value of '3' has not been set, then the unit of measurement associated
with the compartment's size is determined by the value of the enclosing Model
object's 'volumeUnits' attribute.
|
static int |
CORE_20517
Error code 20517:
A Compartment object must have the required attributes 'id' and 'constant', and
may have the optional attributes 'metaid', 'sboTerm', 'name',
'spatialDimensions', 'size' and 'units'.
|
static int |
CORE_20518
Error code 20518:
If neither the attribute 'units' nor the attribute 'spatialDimensions' on a
Compartment object is set, the unit associated with that compartment's size is
undefined.
|
static int |
CORE_20601
Error code 20601:
The value of 'compartment' in a <species> definition must be the identifier of
an existing <compartment> defined in the model.
|
static int |
CORE_20602
Error code 20602:
If a <species> definition sets 'hasOnlySubstanceUnits' to 'true', then it must
not have a value for 'spatialSizeUnits'.
|
static int |
CORE_20603
Error code 20603:
A <species> definition must not set 'spatialSizeUnits' if the <compartment> in
which it is located has a 'spatialDimensions' value of '0'.
|
static int |
CORE_20604
Error code 20604:
If a <species> located in a <compartment> whose 'spatialDimensions' is set to
'0', then that <species> definition cannot set 'initialConcentration'.
|
static int |
CORE_20605
Error code 20605:
If a <species> is located in a <compartment> whose 'spatialDimensions' has value
'1', then that <species> definition can only set 'spatialSizeUnits' to a value
of 'length', 'metre', 'dimensionless', or the identifier of a <unitDefinition>
derived from 'metre' (with an 'exponent' value of '1') or 'dimensionless'.
|
static int |
CORE_20606
Error code 20606:
If a <species> is located in a <compartment> whose 'spatialDimensions' has value
'2', then that <species> definition can only set 'spatialSizeUnits' to a value
of 'area', 'dimensionless', or the identifier of a <unitDefinition> derived from
either 'metre' (with an 'exponent' value of '2') or 'dimensionless'.
|
static int |
CORE_20607
Error code 20607:
If a <species> is located in a <compartment> whose 'spatialDimensions' has value
'3', then that <species> definition can only set 'spatialSizeUnits' to a value
of 'volume', 'litre', 'dimensionless', or the identifier of a <unitDefinition>
derived from either 'litre', 'metre' (with an 'exponent' value of '3') or
'dimensionless'.
|
static int |
CORE_20608
Error code 20608:
The value of a <species>'s 'units' attribute is restricted.
|
static int |
CORE_20609
Error code 20609:
A <species> cannot set values for both 'initialConcentration' and
'initialAmount' because they are mutually exclusive.
|
static int |
CORE_20610
Error code 20610:
A <species>'s quantity cannot be determined simultaneously by both reactions and
rules.
|
static int |
CORE_20611
Error code 20611:
A <species> having boundaryCondition='false' cannot appear as a reactant or
product in any reaction if that Species also has constant='true'.
|
static int |
CORE_20612
Error code 20612:
The value of 'speciesType' in a <species> definition must be the identifier of
an existing <speciesType>.
|
static int |
CORE_20613
Error code 20613:
There cannot be more than one species of a given <speciesType> in the same
compartment of a model.
|
static int |
CORE_20614
Error code 20614:
The 'compartment' attribute in a <species> is mandatory.
|
static int |
CORE_20615
Error code 20615:
The 'spatialSizeUnits' attribute on <species>, previously available in SBML
Level 2 versions prior to Version 3, has been removed as of SBML Level 2 Version
3.
|
static int |
CORE_20616
Error code 20616:
If the attribute 'substanceUnits' in a Species object has not been set, then the
unit of measurement associated with the species' quantity is determined by the
value of the enclosing Model object's 'substanceUnits' attribute.
|
static int |
CORE_20617
Error code 20617:
The value of the attribute 'conversionFactor' on a Species object must be the
identifier of an existing Parameter object defined in the enclosing Model
object.
|
static int |
CORE_20623
Error code 20623:
A Species object must have the required attributes 'id', 'compartment',
'hasOnlySubstanceUnits', 'boundaryCondition' and 'constant', and may have the
optional attributes 'metaid', 'sboTerm', 'name', 'initialAmount',
'initialConcentration', 'substanceUnits' and 'conversionFactor'.
|
static int |
CORE_20701
Error code 20701:
The 'units' in a <Parameter> definition must be a value chosen from among the
following: a predefined unit (e.g., 'substance', 'time', etc.), the identifier
of a <UnitDefinition> in the model, or one of the base units in SBML (e.g.,
'litre', 'mole', 'metre', etc.) Reference: L3V1 Section 4.7.3
|
static int |
CORE_20702
Error code 20702:
If the attribute 'units' on a given Parameter object has not been set, then the
unit of measurement associated with that parameter's value is undefined.
|
static int |
CORE_20705
Error code 20705:
A Parameter object referenced by the attribute 'conversionFactor' on a Species
or Model object must have a value of 'true' for its attribute 'constant'.
|
static int |
CORE_20706
Error code 20706:
A Parameter object must have the required attributes 'id' and 'constant', and
may have the optional attributes 'metaid', 'sboTerm', 'name', 'value' and
'units'.
|
static int |
CORE_20801
Error code 20801:
The value of 'symbol' in an <initialAssignment> definition must be the
identifier of an existing <compartment>, <species>, or <parameter> defined in
the model or <speciesReference> in Level 3.
|
static int |
CORE_20802
Error code 20802:
A given identifier cannot appear as the value of more than one 'symbol' field
across the set of <initialAssignment>s in a model.
|
static int |
CORE_20803
Error code 20803:
The value of a 'symbol' field in any <initialAssignment> definition cannot also
appear as the value of a 'variable' field in an <assignmentRule>.
|
static int |
CORE_20804
Error code 20804:
An InitialAssignment object must contain exactly one MathML <math> element.
|
static int |
CORE_20805
Error code 20805:
An InitialAssignment object must have the required attribute 'symbol' and may
have the optional attributes 'metaid' and 'sboTerm'.
|
static int |
CORE_20806
Error code 20806:
The identifier given as the value of a 'symbol' attribute in any
<initialAssignment> definition cannot be the identifier of a <compartment> with
a 'spatialDimensions' value of 0.
|
static int |
CORE_20901
Error code 20901:
The value of an <assignmentRule>'s 'variable' must be the identifier of an
existing <compartment>, <species>, globally-defined <parameter>, or (in Level 3)
<speciesReference>.
|
static int |
CORE_20902
Error code 20902:
The value of a <rateRule>'s 'variable' must be the identifier of an existing
<compartment>, <species>, globally-defined <parameter>, or (in Level 3)
<speciesReference>.
|
static int |
CORE_20903
Error code 20903:
Any <compartment>, <species>, <parameter>, or (in Level 3) <speciesReference>
whose identifier is the value of a 'variable' attribute in an <assignmentRule>,
must have a value of 'false' for 'constant'.
|
static int |
CORE_20904
Error code 20904:
Any <compartment>, <species>, <parameter>, or (in Level 3) <speciesReference>
whose identifier is the value of a 'variable' attribute in an <rateRule>, must
have a value of 'false' for 'constant'.
|
static int |
CORE_20905
Error code 20905:
|
static int |
CORE_20906
Error code 20906:
There must not be circular dependencies in the combined set of
<initialAssignment>, <assignmentRule> and <kineticLaw> definitions in a model.
|
static int |
CORE_20907
Error code 20907:
Every AssignmentRule, RateRule and AlgebraicRule object must contain exactly one
MathML <math> element.
|
static int |
CORE_20908
Error code 20908:
An AssignmentRule object must have the required attribute 'variable' and may
have the optional attributes 'metaid' and 'sboTerm'.
|
static int |
CORE_20909
Error code 20909:
A RateRule object must have the required attribute 'variable' and may have the
optional attributes 'metaid' and 'sboTerm'.
|
static int |
CORE_20910
Error code 20910:
An AlgebraicRule object may have the optional attributes 'metaid' and 'sboTerm'.
|
static int |
CORE_20911
Error code 20911:
The value of a <rateRule> or <assignmentRule>'s 'variable' attribute must not be
the identifier of a <compartment> with a 'spatialDimensions' value of 0.
|
static int |
CORE_21001
Error code 21001:
A <constraint>'s <math> expression must evaluate to a value of type Boolean.
|
static int |
CORE_21002
Error code 21002:
The order of subelements within <constraint> must be the following: <math>,
<message>.
|
static int |
CORE_21003
Error code 21003:
The contents of the <message> element in a <constraint> must be explicitly
placed in the XHTML XML namespace.
|
static int |
CORE_21004
Error code 21004:
The contents of the <message> element must not contain an XML declaration (i.e.,
a string of the form "<?xml version="1.0" encoding="UTF-8"?>" or similar).
|
static int |
CORE_21005
Error code 21005:
The contents of the <message> element must not contain an XML DOCTYPE
declaration (i.e., a string beginning with the characters "<!DOCTYPE".
|
static int |
CORE_21006
Error code 21006:
The XHTML content inside a <constraint>'s <message> element can only take one of
the following general forms: (1) a complete XHTML document beginning with the
element <html> and ending with </html>; (2) the "body" portion of a document
beginning with the element <body> and ending with </body>; or (3) XHTML content
that is permitted within a <body> ...
|
static int |
CORE_21007
Error code 21007:
A <constraint> object must contain exactly one MathML <math> element.
|
static int |
CORE_21008
Error code 21008:
A <constraint> object may contain at most one <message> subobject.
|
static int |
CORE_21009
Error code 21009:
A <constraint> object may have the optional attributes 'metaid' and 'sboTerm'.
|
static int |
CORE_21101
Error code 21101:
A <reaction> definition must contain at least one <speciesReference>, either in
its <listOfReactants> or its <listOfProducts>.
|
static int |
CORE_21102
Error code 21102:
The order of subelements within <reaction> must be the following:
<listOfReactants> (optional), <listOfProducts> (optional), <listOfModifiers>
(optional), <kineticLaw>.
|
static int |
CORE_21103
Error code 21103:
The following containers are all optional in a <reaction>, but if any is
present, it must not be empty: <listOfReactants>, <listOfProducts>,
<listOfModifiers>, <kineticLaw>.
|
static int |
CORE_21104
Error code 21104:
The list of reactants (<listOfReactants>) and list of products
(<listOfProducts>) in a <reaction> can only contain <speciesReference> elements.
|
static int |
CORE_21105
Error code 21105:
The list of modifiers (<listOfModifiers>) in a <reaction> can only contain
<modifierSpeciesReference> elements.
|
static int |
CORE_21106
Error code 21106:
A <reaction> object may contain at most one of each of the following elements:
<listOfReactants>, <listOfProducts>, <listOfModifiers>, and <kineticLaw>.
|
static int |
CORE_21107
Error code 21107:
The value of the attribute 'compartment' in a <reaction> object is optional, but
if present, must be the identifier of an existing Compartment object defined in
the model.
|
static int |
CORE_21110
Error code 21110:
A <reaction> object must have the required attributes 'id', 'reversible' and
'fast', and may have the optional attributes 'metaid', 'sboTerm', 'name' and
'compartment'.
|
static int |
CORE_21111
Error code 21111:
The value of a <speciesReference> 'species' attribute must be the identifier of
an existing <species> in the model.
|
static int |
CORE_21112
Error code 21112:
|
static int |
CORE_21113
Error code 21113:
A <speciesReference> must not have a value for both 'stoichiometry' and
'stoichiometryMath'; they are mutually exclusive.
|
static int |
CORE_21116
Error code 21116:
A <speciesReference> object must have the required attributes 'species' and
'constant', and may have the optional attributes 'metaid', 'sboTerm', 'name'
'id' and 'stoichiometry'.
|
static int |
CORE_21117
Error code 21117:
A <modifierSpeciesReference> object must have the required attribute 'species'
and may have the optional attributes 'metaid', 'sboTerm', 'id' and 'name'.
|
static int |
CORE_21121
Error code 21121:
All species referenced in the <kineticLaw> formula of a given reaction must
first be declared using <speciesReference> or <modifierSpeciesReference>.
|
static int |
CORE_21122
Error code 21122:
The order of subelements within <kineticLaw> must be the following: <math>,
<listOfParameters>.
|
static int |
CORE_21123
Error code 21123:
If present, the <listOfParameters> in a <kineticLaw> must not be an empty list.
|
static int |
CORE_21124
Error code 21124:
The 'constant' attribute on a <parameter> local to a <kineticLaw> cannot have a
value other than 'true'.
|
static int |
CORE_21125
Error code 21125:
The 'substanceUnits' attribute on <kineticLaw>, previously available in SBML
Level 1 and Level 2 Version 1, has been removed as of SBML Level 2 Version 2.
|
static int |
CORE_21126
Error code 21126:
The 'timeUnits' attribute on <kineticLaw>, previously available in SBML Level 1
and Level 2 Version 1, has been removed as of SBML Level 2 Version 2.
|
static int |
CORE_21127
Error code 21127:
A KineticLaw object may contain at most one ListOfLocalParameters container
object.
|
static int |
CORE_21128
Error code 21128:
Apart from the general Notes and Annotation subobjects permitted on all SBML
components, a ListOfLocalParameters container object may only contain
LocalParameter objects.
|
static int |
CORE_21129
Error code 21129:
A ListOfLocalParameters object may have the optional attributes 'metaid' and
'sboTerm'.
|
static int |
CORE_21130
Error code 21130:
A KineticLaw object must contain exactly one MathML <math> element.
|
static int |
CORE_21131
Error code 21131:
All species referenced in the <stoichiometryMath> formula of a given reaction
must first be declared using <speciesReference> or <modifierSpeciesReference>.
|
static int |
CORE_21132
Error code 21132:
A KineticLaw object may have the optional attributes 'metaid' and 'sboTerm'.
|
static int |
CORE_21150
Error code 21150:
A ListOfSpeciesReferences object may have the optional attributes 'metaid' and
'sboTerm'.
|
static int |
CORE_21151
Error code 21151:
A ListOfModifierSpeciesReferences object may have the optional attributes
'metaid' and 'sboTerm'.
|
static int |
CORE_21152
Error code 21152:
The value of the 'fast' attribute should be 'false', as the attribute has been
deprecated.
|
static int |
CORE_21172
Error code 21172:
A LocalParameter object must have the required attribute 'id' and may have the
optional attributes 'metaid', 'sboTerm', 'name', 'value' and 'units'.
|
static int |
CORE_21201
Error code 21201:
An <event> object must have a 'trigger'.
|
static int |
CORE_21202
Error code 21202:
An <event>'s <trigger> expression must evaluate to a value of type Boolean.
|
static int |
CORE_21203
Error code 21203:
An <event> object must have at least one <eventAssignment> object in its
<listOfEventAssignments>.
|
static int |
CORE_21204
Error code 21204:
The value of an <event>'s 'timeUnits' attribute must be 'time', 'second',
'dimensionless', or the identifier of a <unitDefinition> derived from either
'second' (with an 'exponent' value of '1') or 'dimensionless'.
|
static int |
CORE_21205
Error code 21205:
The order of subelements within <event> must be the following: <trigger>,
<delay>, <listOfEventAssignments>.
|
static int |
CORE_21206
Error code 21206:
If an <event>'s 'useValuesFromTriggerTime' attribute has the value 'false', then
the <event> must contain a <delay> element.
|
static int |
CORE_21207
Error code 21207:
If an Event object contains a Delay subobject, then the Event must have a value
for the attribute 'useValuesFromTriggerTime'.
|
static int |
CORE_21209
Error code 21209:
A Trigger object must contain exactly one MathML <math> element.
|
static int |
CORE_21210
Error code 21210:
A Delay object must contain exactly one MathML <math> element.
|
static int |
CORE_21211
Error code 21211:
The value of the attribute 'variable' in an <eventAssignment> can only be the
identifier of a <compartment>, <species>, model-wide <parameter> definition, or
<speciesReference> in Level 3.
|
static int |
CORE_21212
Error code 21212:
Any <compartment>, <species>, <parameter>, or (in Level 3) <speciesReference>
definition whose identifier is used as the value of 'variable' in an
<eventAssignment> must have a value of 'false' for its 'constant' attribute.
|
static int |
CORE_21213
Error code 21213:
An EventAssignment object must contain exactly one MathML <math> element.
|
static int |
CORE_21214
Error code 21214:
An EventAssignment object must have the required attribute 'variable' and may
have the optional attributes 'metaid' and 'sboTerm'.
|
static int |
CORE_21221
Error code 21221:
An Event object may contain at most one Delay object.
|
static int |
CORE_21222
Error code 21222:
An Event object may contain at most one ListOfEventAssignments object.
|
static int |
CORE_21223
Error code 21223:
Apart from the general Notes and Annotation subobjects permitted on all SBML
components, a ListOfEventAssignments container object may only contain
EventAssignment objects.
|
static int |
CORE_21224
Error code 21224:
A ListOfEventAssignments object may have the optional attributes 'metaid' and
'sboTerm'.
|
static int |
CORE_21225
Error code 21225:
An Event object must have the required attribute 'useValuesFromTriggerTime' and
in addition may have the optional attributes 'metaid', 'sboTerm', 'id', and
'name'.
|
static int |
CORE_21226
Error code 21226:
A Trigger object must have the required attributes 'persistent' and
'initialValue', and in addition, may have the optional attributes 'metaid' and
'sboTerm'.
|
static int |
CORE_21227
Error code 21227:
A Delay object may have the optional attributes 'metaid' and 'sboTerm'.
|
static int |
CORE_21228
Error code 21228:
The attribute 'persistent' on a Trigger object must have a value of type
Boolean.
|
static int |
CORE_21229
Error code 21229:
The attribute 'initialValue' on a Trigger object must have a value of type
Boolean.
|
static int |
CORE_21230
Error code 21230:
An Event object may contain at most one Priority object.
|
static int |
CORE_21231
Error code 21231:
An Priority object must contain exactly one MathML <math> element.
|
static int |
CORE_21232
Error code 21232:
A Priority object may have the optional attributes 'metaid' and 'sboTerm'.
|
static int |
CORE_29999
Error code 29999:
|
static int |
CORE_80501
Error code 80501:
As a principle of best modeling practice, the size of a <compartment> should be
set to a value rather than be left undefined.
|
static int |
CORE_80601
Error code 80601:
As a principle of best modeling practice, the <species> should set an initial
value (amount or concentration) rather than be left undefined.
|
static int |
CORE_80701
Error code 80701:
As a principle of best modeling practice, the units of a <parameter> should be
declared rather than be left undefined.
|
static int |
CORE_80702
Error code 80702:
As a principle of best modeling practice, the <parameter> should set an initial
value rather than be left undefined.
|
static int |
CORE_81121
Error code 81121:
In SBML's simple symbol system, there is no separation of symbols by class of
object; consequently, inside the kinetic law mathematical formula, the value of
a local parameter having the same identifier as a species or compartment or
other global model entity will override the global value.
|
static int |
CORE_90000
Error code 90000:
|
static int |
CORE_90001
Error code 90001:
Use of SBML Level 1 Version 1 is not recommended and conversion is not supported
by libSBML.
|
static int |
CORE_91001
Error code 91001:
A model with <event> definitions cannot be represented in SBML Level 1.
|
static int |
CORE_91002
Error code 91002:
SBML Level 1 does not have <functionDefinitions>.
|
static int |
CORE_91003
Error code 91003:
Conversion of a model with <constraint>s to SBML Level 1 may result in loss of
information.
|
static int |
CORE_91004
Error code 91004:
SBML Level 1 does not have <initialAssignments>.
|
static int |
CORE_91005
Error code 91005:
<speciesType> definitions cannot be represented in SBML Level 1.
|
static int |
CORE_91006
Error code 91006:
<compartmentType> definitions cannot be represented in SBML Level 1.
|
static int |
CORE_91007
Error code 91007:
A <compartment> with 'spatialDimensions' not equal to 3 cannot be represented in
SBML Level 1.
|
static int |
CORE_91008
Error code 91008:
A <speciesReference> containing a non-integer or non-rational
<stoichiometryMath> subelement cannot be represented in SBML Level 1.
|
static int |
CORE_91009
Error code 91009:
A <speciesReference> containing a non-integer 'stoichiometry' attribute value
cannot be represented in SBML Level 1.
|
static int |
CORE_91010
Error code 91010:
A <unit> containing multipliers or offsets cannot be represented in SBML Level
1.
|
static int |
CORE_91011
Error code 91011:
A <species> that does not identify its compartment cannot be represented in SBML
Level 1.
|
static int |
CORE_91012
Error code 91012:
The information represented by the value of a 'spatialSizeUnit' attribute on a
<species> definition cannot be represented in SBML Level 1.
|
static int |
CORE_91013
Error code 91013:
SBO terms cannot be represented directly in SBML Level 1.
|
static int |
CORE_91014
Error code 91014:
SBML Level 2 Version 4 removed the requirement that all units be consistent.
|
static int |
CORE_91015
Error code 91015:
This model contains conversion factors and thus conversion to earlier levels is
not supported.
|
static int |
CORE_91016
Error code 91016:
SBML Level 1/2 do not have the 'compartment' attribute on a Reaction.
|
static int |
CORE_91017
Error code 91017:
Conversion to SBML Level 1 requires that 'extent' units be a variant of
substance
|
static int |
CORE_91018
Error code 91018:
Conversion to SBML Levels 1 and 2 requires that any global units must refer to a
valid unit kind or the id of a valid unitDefinition.
|
static int |
CORE_91019
Error code 91019:
The concept of a Species having only substance units and not units of
concentration cannot be correctly interpreted in SBML Level 1 without alteration
of any mathematical formula.
|
static int |
CORE_91020
Error code 91020:
Conversion of the csymbol avogadro is not yet supported.
|
static int |
CORE_92001
Error code 92001:
Conversion of a model with <constraints> to SBML Level 2 Version 1 may result in
loss of information.
|
static int |
CORE_92002
Error code 92002:
SBML Level 2 Version 1 does not have <initialAssignments>.
|
static int |
CORE_92003
Error code 92003:
<speciesType> definitions cannot be represented in SBML Level 2 Version 1.
|
static int |
CORE_92004
Error code 92004:
<compartmentType> definitions cannot be represented in SBML Level 2 Version 1.
|
static int |
CORE_92005
Error code 92005:
SBO terms cannot be represented directly in SBML Level 2 Version 1.
|
static int |
CORE_92006
Error code 92006:
The 'id' attribute value of a <speciesReference> cannot be represented directly
in SBML Level 2 Version 1.
|
static int |
CORE_92007
Error code 92007:
The implication of 'useValuesFromTriggerTime=false' is that there is a delay
between the time of trigger and the time of value assignments performed by the
<event>.
|
static int |
CORE_92008
Error code 92008:
SBML Level 2 Version 4 removed the requirement that all units be consistent.
|
static int |
CORE_92009
Error code 92009:
Models in SBML Level 2 Versions 1-4 can only represent compartments with integer
values 0, 1, 2, or 3 as spatial dimensions.
|
static int |
CORE_92010
Error code 92010:
Conversion of a varying stoichiometry to an SBML L2 StoichiometryMath element is
not yet supported.
|
static int |
CORE_92011
Error code 92011:
Event priority is not supported in SBML Level 2.
|
static int |
CORE_92012
Error code 92012:
Non persistent events are not supported in SBML Level 2.
|
static int |
CORE_92013
Error code 92013:
Initialvalue of event Triggers was assumed true in L2.
|
static int |
CORE_93001
Error code 93001:
In SBML Level 2 Version 2, an 'sboTerm' attribute is only permitted on the
following elements: <model>, <functionDefinition>, <parameter>,
<initialAssignment>, <rule>, <constraint>, <reaction>, <speciesReference>,
<kineticLaw>, <event> and <eventAssignment>.
|
static int |
CORE_93002
Error code 93002:
The 'offset' attribute on <unit> previously available in SBML Level 2 Version 1,
has been removed as of SBML Level 2 Version 2.
|
static int |
CORE_93003
Error code 93003:
The 'timeUnits' attribute on <kineticLaw>, previously available in SBML Level 1
and Level 2 Version 1, has been removed as of SBML Level 2 Version 2.
|
static int |
CORE_93004
Error code 93004:
The 'substanceUnits' attribute on <kineticLaw>, previously available in SBML
Level 1 and Level 2 Version 1, has been removed as of SBML Level 2 Version 2.
|
static int |
CORE_93005
Error code 93005:
The implication of 'useValuesFromTriggerTime=false' is that there is a delay
between the time of trigger and the time of value assignments performed by the
<event>.
|
static int |
CORE_93006
Error code 93006:
In SBML Level 2 prior to Version 4 the value of the 'sboTerm' attribute on a
<model> is expected to be a term derived from SBO:0000004, "modeling framework";
in Version 4 and above it is expected to be a term derived from SBO:0000231
"interaction".
|
static int |
CORE_93007
Error code 93007:
SBML Level 2 Version 4 removed the requirement that all units be consistent.
|
static int |
CORE_93008
Error code 93008:
SBML Level 2 Version 4 removed the requirement that all sboTerms be drawn from a
given branch of SBO (http://www.biomodels.net/SBO/).
|
static int |
CORE_93009
Error code 93009:
In SBML prior to Level 2 Version 1 annotations it was permissible to have
multiple top level elements using the same namespace.
|
static int |
CORE_94001
Error code 94001:
The 'offset' attribute on <unit> previously available in SBML Level 2 Version 1,
has been removed as of SBML Level 2 Version 2.
|
static int |
CORE_94002
Error code 94002:
The 'timeUnits' attribute on <kineticLaw>, previously available in SBML Level 1
and Level 2 Version 1, has been removed as of SBML Level 2 Version 2.
|
static int |
CORE_94003
Error code 94003:
The 'substanceUnits' attribute on <kineticLaw>, previously available in SBML
Level 1 and Level 2 Version 1, has been removed as of SBML Level 2 Version 2.
|
static int |
CORE_94004
Error code 94004:
The 'spatialSizeUnits' attribute on <species>, previously available in SBML
Level 2 versions prior to Version 3, has been removed as of SBML Level 2 Version
3.
|
static int |
CORE_94005
Error code 94005:
The 'timeUnits' attribute on <event>, previously available in SBML Level 2
versions prior to Version 3, has been removed as of SBML Level 2 Version 3.
|
static int |
CORE_94006
Error code 94006:
The implication of 'useValuesFromTriggerTime=false' is that there is a delay
between the time of trigger and the time of value assignments performed by the
<event>.
|
static int |
CORE_94007
Error code 94007:
In SBML Level 2 prior to Version 4 the value of the 'sboTerm' attribute on a
<model> is expected to be a term derived from SBO:0000004, "modeling framework";
in Version 4 and above it is expected to be a term derived from SBO:0000231
"interaction".
|
static int |
CORE_94008
Error code 94008:
SBML Level 2 Version 4 removed the requirement that all units be consistent.
|
static int |
CORE_94009
Error code 94009:
SBML Level 2 Version 4 removed the requirement that all sboTerms be drawn from a
given branch of SBO (http://www.biomodels.net/SBO/).
|
static int |
CORE_94010
Error code 94010:
In SBML prior to Level 2 Version 1 annotations it was permissible to have
multiple top level elements using the same namespace.
|
static int |
CORE_95001
Error code 95001:
The 'offset' attribute on <unit> previously available in SBML Level 2 Version 1,
has been removed as of SBML Level 2 Version 2.
|
static int |
CORE_95002
Error code 95002:
The 'timeUnits' attribute on <kineticLaw>, previously available in SBML Level 1
and Level 2 Version 1, has been removed as of SBML Level 2 Version 2.
|
static int |
CORE_95003
Error code 95003:
The 'substanceUnits' attribute on <kineticLaw>, previously available in SBML
Level 1 and Level 2 Version 1, has been removed as of SBML Level 2 Version 2.
|
static int |
CORE_95004
Error code 95004:
The 'spatialSizeUnits' attribute on <species>, previously available in SBML
Level 2 versions prior to Version 3, has been removed as of SBML Level 2 Version
3.
|
static int |
CORE_95005
Error code 95005:
The 'timeUnits' attribute on <event>, previously available in SBML Level 2
versions prior to Version 3, has been removed as of SBML Level 2 Version 3.
|
static int |
CORE_95006
Error code 95006:
In SBML Level 2 prior to Version 4 the value of the 'sboTerm' attribute on a
<model> is expected to be a term derived from SBO:0000004, "modeling framework";
in Version 4 and above it is expected to be a term derived from SBO:0000231
"interaction".
|
static int |
CORE_95007
Error code 95007:
In SBML prior to Level 2 Version 1 annotations it was permissible to have
multiple top level elements using the same namespace.
|
static int |
CORE_96001
Error code 96001:
<speciesType> definitions cannot be represented in SBML Level 3 Version 1.
|
static int |
CORE_96002
Error code 96002:
<compartmentType> definitions cannot be represented in SBML Level 3 Version 1.
|
static int |
CORE_96003
Error code 96003:
The 'offset' attribute on <unit> previously available in SBML Level 2 Version 1,
has been removed as of SBML Level 2 Version 2.
|
static int |
CORE_96004
Error code 96004:
The 'timeUnits' attribute on <kineticLaw>, previously available in SBML Level 1
and Level 2 Version 1, has been removed as of SBML Level 2 Version 2.
|
static int |
CORE_96005
Error code 96005:
The 'substanceUnits' attribute on <kineticLaw>, previously available in SBML
Level 1 and Level 2 Version 1, has been removed as of SBML Level 2 Version 2.
|
static int |
CORE_96006
Error code 96006:
The 'spatialSizeUnits' attribute on <species>, previously available in SBML
Level 2 versions prior to Version 3, has been removed as of SBML Level 2 Version
3.
|
static int |
CORE_96007
Error code 96007:
The 'timeUnits' attribute on <event>, previously available in SBML Level 2
versions prior to Version 3, has been removed as of SBML Level 2 Version 3.
|
static int |
CORE_96008
Error code 96008:
In SBML Level 2 prior to Version 4 the value of the 'sboTerm' attribute on a
<model> is expected to be a term derived from SBO:0000004, "modeling framework";
in Version 4 and above it is expected to be a term derived from SBO:0000231
"interaction".
|
static int |
CORE_96009
Error code 96009:
In SBML prior to Level 2 Version 1 annotations it was permissible to have
multiple top level elements using the same namespace.
|
static int |
CORE_96010
Error code 96010:
The 'outside' attribute on <compartment>, previously available in SBML Level 2
has been removed as of SBML Level 3 Version 1.
|
static int |
CORE_96011
Error code 96011:
Conversion of a model with <stoichiometryMath> to SBML Level 3 is not yet
supported.
|
static int |
CORE_99101
Error code 99101:
The level and version specified for the document must be consistent with a valid
published SBML specification.
|
static int |
CORE_99104
Error code 99104:
The <sbml> container element cannot contain <notes> or <annotations> in an SBML
Level 1 document.
|
static int |
CORE_99106
Error code 99106:
The math field of an assignment rule structure can contain any identifier in a
MathML <ci> element except for the following: (a) identifiers for which there
exists a subsequent assignment rule, and (b) the identifier for which the rule
is defined.
|
static int |
CORE_99107
Error code 99107:
Every SBML Level 3 package is identified uniquely by an XML namespace URI and
defines the attribute named 'required'.
|
static int |
CORE_99108
Error code 99108:
Every SBML Level 3 package is identified uniquely by an XML namespace URI and
defines the attribute named 'required'.
|
static int |
CORE_99109
Error code 99109:
The 'required' attribute for this package is expected to be 'false' as there is
no way to change the mathematical interpretation of the model using the
constructs in this package.
|
static int |
CORE_99127
Error code 99127:
A KineticLaw's substanceUnits must be 'substance', 'item', 'mole', or the id of
a UnitDefinition that defines a variant of 'item' or 'mole' (L2v1 Section
4.9.7).
|
static int |
CORE_99128
Error code 99128:
A KineticLaw's timeUnits must be 'time', 'second', or the id of a UnitDefnition
that defines a variant of 'second' with exponent='1' (L2v1 Section 4.9.7).
|
static int |
CORE_99129
Error code 99129:
In a Level 1 model, only predefined functions are permitted within the formula.
|
static int |
CORE_99130
Error code 99130:
The value of the attribute substanceUnits on a Model object should be either the
units 'mole', 'item', 'avogadro', 'dimensionless', 'kilogram', 'gram', or the
identifier of a UnitDefinition object based on these units.
|
static int |
CORE_99206
Error code 99206:
The 'timeUnits' attribute on <event>, previously available in SBML Level 2
versions prior to Version 3, has been removed as of SBML Level 2 Version 3.
|
static int |
CORE_99219
Error code 99219:
Invalid MathML.
|
static int |
CORE_99220
Error code 99220:
Failed to read a valid double value from MathML.
|
static int |
CORE_99221
Error code 99221:
Failed to read a valid integer value from MathML.
|
static int |
CORE_99222
Error code 99222:
Failed to read a valid exponential value from MathML.
|
static int |
CORE_99223
Error code 99223:
Failed to read a valid rational value from MathML.
|
static int |
CORE_99224
Error code 99224:
Invalid MathML.
|
static int |
CORE_99225
Error code 99225:
An invalid MathML attribute has been encountered.
|
static int |
CORE_99301
Error code 99301:
The csymbol 'time' should not be used within the <math> element of a
<functionDefinition>.
|
static int |
CORE_99302
Error code 99302:
The <lambda> element of a FunctionDefinition object must contain a function body
in addition to zero or more arguments.
|
static int |
CORE_99303
Error code 99303:
Where a component has an attribute that refers to a unit identifier, that
attribute must refer to a unit defined in SBML or be the id of a UnitDefinition
in the model.
|
static int |
CORE_99401
Error code 99401:
In order to follow the general syntax for a standard SBML RDF annotation the
first element of RDF element must be a Description element with an 'about'
attribute.
|
static int |
CORE_99402
Error code 99402:
In order to follow the general syntax for a standard SBML RDF annotation, the
'about' attribute of the Description element must be of the form #string.
|
static int |
CORE_99403
Error code 99403:
In order to follow the general syntax for a standard SBML RDF annotation, the
'about' attribute of the Description element must be of the form #string, where
the string component is equal to the value of the metaid attribute of the
containing SBML element.
|
static int |
CORE_99404
Error code 99404:
LibSBML expected to read the annotation into a ModelHistory object.
|
static int |
CORE_99405
Error code 99405:
LibSBML expected to read the annotation into a ModelHistory object.
|
static int |
CORE_99406
Error code 99406:
An annotation must contain elements; with each top-level element placed in a
unique namespace.
|
static int |
CORE_99407
Error code 99407:
The specified annotation RELATION element does not permit nested elements.
|
static int |
CORE_99505
Error code 99505:
In situations where a mathematical expression contains literal numbers or
parameters whose units have not been declared, it is not possible to verify
accurately the consistency of the units in the expression.
|
static int |
CORE_99506
Error code 99506:
In situations where a mathematical expression refers to time, the units of time
should be consistent with the global time units of the model.
|
static int |
CORE_99507
Error code 99507:
In situations where a mathematical expression refers to extent, the units of
extent should be consistent with the global extent units of the model.
|
static int |
CORE_99508
Error code 99508:
In situations where a mathematical expression refers to a compartment, species
or parameter, it is necessary to know the units of the object to establish unit
consistency.
|
static int |
CORE_99701
Error code 99701:
The SBOTerm used is not recognized by libSBML and therefore the correct
parentage cannot be checked.
|
static int |
CORE_99702
Error code 99702:
The SBOTerm value used is considered obsolete.
|
static int |
CORE_99901
Error code 99901:
The 'spatialDimensions' attribute on <compartment> was not available in SBML
Level 1.
|
static int |
CORE_99902
Error code 99902:
The 'compartmentType' attribute on <compartment> was not available in SBML Level
1 or SBML Level 2 Version 1.
|
static int |
CORE_99903
Error code 99903:
The 'constant' attribute on <compartment> and <parameter> was not available in
SBML Level 1.
|
static int |
CORE_99904
Error code 99904:
The 'metaid' attribute on all <SBase> objects was not available in SBML Level 1.
|
static int |
CORE_99905
Error code 99905:
The 'sboTerm' attribute on <compartment>, <compartmentType> <delay>, <species>,
<speciesType>, <stoichiometryMath>, <trigger> <unit> and <unitDefinition> was
not available before SBML Level 2 Version 3.
|
static int |
CORE_99906
Error code 99906:
The value of the 'units' attribute on a <compartment> must be either 'volume',
'litre', 'liter' or the identifier of a <unitDefinition> based on either
'litre'/'liter' or 'metre'/'meter' (with 'exponent' equal to '3').
|
static int |
CORE_99907
Error code 99907:
A value for the compartment 'volume' attribute must be specified in this
Level+Version of SBML.
|
static int |
CORE_99908
Error code 99908:
The <compartmentType> component was introduced in SBML Level 2 Version 2.
|
static int |
CORE_99909
Error code 99909:
The <constraint> component was introduced in SBML Level 2 Version 2.
|
static int |
CORE_99910
Error code 99910:
The <event> component was introduced in SBML Level 2 Version 1.
|
static int |
CORE_99911
Error code 99911:
The 'sboTerm' attribute on <event>, <eventAssignment> <functionDefinition>,
<kineticLaw>, <model>, <parameter>, <reaction> <rule> and <speciesReferenece>
was not available before SBML Level 2 Version 2.
|
static int |
CORE_99912
Error code 99912:
The <functionDefinition> component was introduced in SBML Level 2 Version 1.
|
static int |
CORE_99913
Error code 99913:
The <initialAssignment> component was introduced in SBML Level 2 Version 2.
|
static int |
CORE_99914
Error code 99914:
An <algebraicRule> does not assign a value to a particular variable and does not
carry an attribute named 'variable'.
|
static int |
CORE_99915
Error code 99915:
The 'units' attribute on <rule> was only applicable to a <parameterRule> in SBML
Level 1.
|
static int |
CORE_99916
Error code 99916:
The 'constant' attribute on <species> was not available in SBML Level 1.
|
static int |
CORE_99917
Error code 99917:
The 'spatialSizeUnits' attribute on <species> was not available in SBML Level 1.
|
static int |
CORE_99918
Error code 99918:
The 'speciesType' attribute on <species> was not available in SBML Level 1 or
SBML Level 2 Version 1.
|
static int |
CORE_99919
Error code 99919:
The 'hasOnlySubstanceUnits' attribute on <species> was not available in SBML
Level 1.
|
static int |
CORE_99920
Error code 99920:
The 'id' attribute on <speciesReference> was not available in SBML Level 1 or
SBML Level 2 Version 1.
|
static int |
CORE_99921
Error code 99921:
The 'name' attribute on <speciesReference> was not available in SBML Level 1 or
SBML Level 2 Version 1.
|
static int |
CORE_99922
Error code 99922:
The <speciesType> component was introduced in SBML Level 2 Version 2.
|
static int |
CORE_99923
Error code 99923:
The <stoichiometryMath> component on a <speciesReference> was introduced in SBML
Level 2.
|
static int |
CORE_99924
Error code 99924:
The 'multiplier' attribute on <unit> was not available in SBML Level 1.
|
static int |
CORE_99925
Error code 99925:
The 'offset' attribute on <unit> was only available in SBML Level 2 Version 1.
|
static int |
CORE_99926
Error code 99926:
The 'spatialDimensions' attribute on <compartment> was left unset on the SBML
Level 3 model.
|
static int |
CORE_99994
Error code 99994:
|
static int |
CORE_99995
Error code 99995:
|
static int |
CORE_99996
Error code 99996:
Conversion of SBML Level 3 package information is not yet supported.
|
static int |
CORE_99997
Error code 99997:
Conversion is only possible to an existing SBML Level and Version.
|
static int |
CORE_99998
Error code 99998:
Validation of or conversion from L3 documents/models is not yet supported.
|
static int |
CORE_99999
Error code 99999:
|
static int |
FBC_10100
Error code 2010100:
|
static int |
FBC_10101
Error code 2010101:
To conform to Version 1 of the Flux Balance Constraints package specification
for SBML Level 3, an SBML document must declare the use of the following XML
Namespace: 'http://www.sbml.org/sbml/level3/version1/fbc/version1' Reference:
L3V1 Fbc V1 Section 3.1
|
static int |
FBC_10102
Error code 2010102:
Wherever they appear in an SBML document, elements and attributes from the Flux
Balance Constraints package must be declared either implicitly or explicitly to
be in the XML namespace 'http://www.sbml.org/sbml/level3/version1/fbc/version1'
Reference: L3V1 Fbc V1 Section 3.1
|
static int |
FBC_10301
Error code 2010301:
(Extends validation rule #10301 in the SBML Level 3 Version 1 Core
specification.) Within a <model> object the values of the attributes id and
fbc:id on every instance of the following classes of objects must be unique
across the set of all id and fbc:id attribute values of all such objects in a
model: the model itself, plus all contained <functionDefinition>, <compartment>,
<species>, <reaction>, <speciesReference>, <modifierSpeciesReference>, <event>,
and <parameter> objects, plus the <fluxBound>, <objective>, <fluxObjective>,
<geneProduct> and <geneProductAssociation> objects defined by the Flux Balance
Constraints package.
|
static int |
FBC_10302
Error code 2010302:
The value of a fbc:id attribute must always conform to the syntax of the SBML
data type SId.
|
static int |
FBC_20101
Error code 2020101:
In all SBML documents using the Flux Balance Constraints package, the SBML
object must include a value for the attribute 'fbc:required.
|
static int |
FBC_20102
Error code 2020102:
The value of attribute 'fbc:required' on the SBML object must be of the data
type Boolean.
|
static int |
FBC_20103
Error code 2020103:
The value of attribute 'fbc:required' on the SBML object must be set to 'false'.
|
static int |
FBC_20201
Error code 2020201:
There may be at most one instance of each of the following kinds of objects
within a <model> object using Flux Balance Constraints: <listOfFluxBounds> (V1
only), <listOfObjectives> and <listOfGeneProducts> (V2).
|
static int |
FBC_20202
Error code 2020202:
The various ListOf subobjects with a <model> object are optional, but if
present, these container object must not be empty.
|
static int |
FBC_20203
Error code 2020203:
Apart from the general notes and annotation subobjects permitted on all SBML
objects, a <listOfFluxBounds> container object may only contain <fluxBound>
objects.
|
static int |
FBC_20204
Error code 2020204:
Apart from the general notes and annotation subobjects permitted on all SBML
objects, a <listOfObjectives> container object may only contain <objective>
objects.
|
static int |
FBC_20205
Error code 2020205:
A <listOfFluxBounds> object may have the optional attributes 'metaid' and
'sboTerm' defined by SBML Level 3 Core.
|
static int |
FBC_20206
Error code 2020206:
A <listOfFluxBounds> object may have the optional attributes 'metaid' and
'sboTerm' defined by SBML Level 3 Core.
|
static int |
FBC_20207
Error code 2020207:
The value of attribute 'fbc:activeObjective' on the <listOfObjectives> object
must be of the data type SIdRef.
|
static int |
FBC_20208
Error code 2020208:
The value of attribute 'fbc:activeObjective' on the <listOfObjectives> object
must be the identifier of an existing <objective>.
|
static int |
FBC_20209
Error code 2020209:
A <model> object must have the required attributes 'strict'.
|
static int |
FBC_20210
Error code 2020210:
The attribute 'fbc:strict' on the <model> object must have a value of datatype
boolean.
|
static int |
FBC_20211
Error code 2020211:
Apart from the general notes and annotation subobjects permitted on all SBML
objects, a <listOfGeneProducts> container object may only contain <geneProduct>
objects.
|
static int |
FBC_20212
Error code 2020212:
A <listOfGeneProducts> object may have the optional attributes 'metaid' and
'sboTerm' defined by SBML Level 3 Core.
|
static int |
FBC_20301
Error code 2020301:
A SBML <species> object may have the optional attributes 'fbc:charge' and
'fbc:chemicalFormula'.
|
static int |
FBC_20302
Error code 2020302:
The value of attribute 'fbc:charge' on SBML <species> object must be of the data
type integer.
|
static int |
FBC_20303
Error code 2020303:
The value of attribute 'fbc:chemicalFormula' on the SBML <species> object must
be set to a string consisting only of atomic names or user defined compounds and
their occurrence.
|
static int |
FBC_20401
Error code 2020401:
A <fluxBound> object may have the optional SBML Level 3 Core attributes 'metaid'
and 'sboTerm'.
|
static int |
FBC_20402
Error code 2020402:
A <fluxBound> object may have the optional SBML Level 3 Core subobjects for
notes and annotations.
|
static int |
FBC_20403
Error code 2020403:
A <fluxBound> object must have the required attributes 'fbc:reaction',
'fbc:operation' and 'fbc:value', and may have the optional attributes 'fbc:id'
and 'fbc:name'.
|
static int |
FBC_20404
Error code 2020404:
The attribute 'fbc:reaction' of a <fluxBound> must be of the data type SIdRef.
|
static int |
FBC_20405
Error code 2020405:
The attribute 'fbc:name' of a <fluxBound> must be of the data type string.
|
static int |
FBC_20406
Error code 2020406:
The attribute 'fbc:operation' of a <fluxBound> must be of the data type
FbcOperation and thus it's value must be one of 'lessEqual', 'greaterEqual' or
'equal'.
|
static int |
FBC_20407
Error code 2020407:
The attribute 'fbc:value' of a <fluxBound> must be of the data type double.
|
static int |
FBC_20408
Error code 2020408:
The value of the attribute 'fbc:reaction' of a <fluxBound> object must be the
identifier of an existing <reaction> object defined in the enclosing <model>
object.
|
static int |
FBC_20409
Error code 2020409:
The combined set of all <fluxBound>'s with identical values for 'fbc:reaction'
must be consistent.
|
static int |
FBC_20501
Error code 2020501:
An <objective> object may have the optional SBML Level 3 Core attributes
'metaid' and 'sboTerm'.
|
static int |
FBC_20502
Error code 2020502:
An <objective> object may have the optional SBML Level 3 Core subobjects for
notes and annotations.
|
static int |
FBC_20503
Error code 2020503:
An <objective> object must have the required attributes 'fbc:id' and 'fbc:type'
and may have the optional attribute 'fbc:name'.
|
static int |
FBC_20504
Error code 2020504:
The attribute 'fbc:name' on an <objective> must be of the data type 'string'.
|
static int |
FBC_20505
Error code 2020505:
The attribute 'fbc:type' on an <objective> must be of the data type FbcType and
thus its value must be one of 'minimize' or 'maximize.
|
static int |
FBC_20506
Error code 2020506:
An <objective> object must have one and only one instance of the
<listOfFluxObjectives> object.
|
static int |
FBC_20507
Error code 2020507:
The <listOfFluxObjectives> subobject within an <objective> object must not be
empty.
|
static int |
FBC_20508
Error code 2020508:
Apart from the general notes and annotation subobjects permitted on all SBML
objects, a <listOfFluxObjectives> container object may only contain
<fluxObjective> objects.
|
static int |
FBC_20509
Error code 2020509:
A <listOfFluxObjectives> object may have the optional 'metaid' and 'sboTerm'
defined by SBML Level 3 Core.
|
static int |
FBC_20601
Error code 2020601:
A <fluxObjective> object may have the optional SBML Level 3 Core attributes
'metaid' and 'sboTerm'.
|
static int |
FBC_20602
Error code 2020602:
A <fluxObjective> object may have the optional SBML Level 3 Core subobjects for
notes and annotations.
|
static int |
FBC_20603
Error code 2020603:
A <fluxObjective> object must have the required attributes 'fbc:reaction' and
'fbc:coefficient', and may have the optional attributes 'fbc:id' and 'fbc:name'.
|
static int |
FBC_20604
Error code 2020604:
The attribute 'fbc:name' on a <fluxObjective> must be of the data type 'string'.
|
static int |
FBC_20605
Error code 2020605:
The value of the attribute 'fbc:reaction' of a <fluxObjective> object must
conform to the syntax of the SBML data type 'SIdRef'.
|
static int |
FBC_20606
Error code 2020606:
The value of the attribute 'fbc:reaction' of a <fluxObjective> object must be
the identifier of an existing <reaction> object defined in the enclosing <model>
object.
|
static int |
FBC_20607
Error code 2020607:
The value of the attribute 'fbc:coefficient' of a <fluxObjective> object must
conform to the syntax of the SBML data type 'double'.
|
static int |
FBC_20608
Error code 2020608:
When the value of the <model> 'fbc:strict' attribute is true, the value of the
attribute 'fbc:coefficient' of a <fluxObjective> object must not be set to
'NaN', 'INF' or '-INF'.
|
static int |
FBC_20701
Error code 2020701:
There may be at most one instance of a <GeneProductAssociation> within a
<Reaction> object using Flux BalanceConstraints.
|
static int |
FBC_20702
Error code 2020702:
An SBML <Reaction> object may have the optional attributes 'fbc:lowerFluxBound'
and 'fbc:upperFluxBound'.
|
static int |
FBC_20703
Error code 2020703:
The attribute 'fbc:lowerFluxBound' of a <Reaction> must be of the data type
'SIdRef'.
|
static int |
FBC_20704
Error code 2020704:
The attribute 'fbc:upperFluxBound' of a <Reaction> must be of the data type
'SIdRef'.
|
static int |
FBC_20705
Error code 2020705:
The attribute 'fbc:lowerFluxBound' of a <Reaction> must point to an existing
<Parameter> in the model.
|
static int |
FBC_20706
Error code 2020706:
The attribute 'fbc:upperFluxBound' of a <Reaction> must point to an existing
<Parameter> in the model.
|
static int |
FBC_20707
Error code 2020707:
When the value of the <Model>s 'fbc:strict' attribute is 'true', a <Reaction>
must define the attributes 'fbc:lowerFluxBound' and 'fbc:upperFluxBound'.
|
static int |
FBC_20708
Error code 2020708:
When the value of the <Model>s 'fbc:strict' attribute is 'true', the <Parameter>
objects referred to by the attributes 'fbc:lowerFluxBound' and
'fbc:upperFluxBound' must have their 'constant' attribute set to 'true'.
|
static int |
FBC_20709
Error code 2020709:
When the value of the <Model>s 'fbc:strict' attribute is 'true', the <Parameter>
objects referred to by the attributes 'fbc:lowerFluxBound' and
'fbc:upperFluxBound' must have a defined value for their 'value' attribute,
which may not be 'NaN'.
|
static int |
FBC_20710
Error code 2020710:
When the value of the <Model>s 'fbc:strict' attribute is 'true', the <Parameter>
objects referred to by the attributes 'fbc:lowerFluxBound' and
'fbc:upperFluxBound' may not be targeted by an <InitialAssignment>.
|
static int |
FBC_20711
Error code 2020711:
When the value of the <Model>s 'fbc:strict' attribute is 'true', the <Parameter>
objects referred to by the attribute 'fbc:lowerFluxBound' may not have the value
'INF'.
|
static int |
FBC_20712
Error code 2020712:
When the value of the <Model>s 'fbc:strict' attribute is 'true', the <Parameter>
object referred to by the attribute 'fbc:upperFluxBound' may not have the value
'-INF'.
|
static int |
FBC_20713
Error code 2020713:
When the value of the <Model>s 'fbc:strict' attribute is 'true', the <Parameter>
object referred to by the attribute 'fbc:lowerFluxBound' must be less than or
equal to the value of the <Parameter> object referred to by the attribute
'fbc:upperFluxBound' .
|
static int |
FBC_20714
Error code 2020714:
When the value of the <Model>s 'fbc:strict' attribute is 'true', the 'constant'
attribute of <SpeciesReference> elements of a <Reaction> must be set to 'true'.
|
static int |
FBC_20715
Error code 2020715:
When the value of the <Model>s 'fbc:strict' attribute is 'true', the value of a
<SpeciesReference>'s 'stoichiometry> attribute must not be set to 'NaN', '-INF'
or 'INF'.
|
static int |
FBC_20716
Error code 2020716:
When the value of the <Model>s 'fbc:strict' attribute is 'true', the
<SpeciesReference> elements of a <Reaction> may not be targeted by an
<InitialAssignment>.
|
static int |
FBC_20801
Error code 2020801:
A <GeneProductAssociation> object may have the optional SBML Level 3 Core
attributes 'metaid' and 'sboTerm'.
|
static int |
FBC_20802
Error code 2020802:
A <GeneProductAssociation> object may have the optional SBML Level 3 Core
subobjects for notes and annotations.
|
static int |
FBC_20803
Error code 2020803:
A <GeneProductAssociation> object may have the optional attributes 'fbc:id' and
'fbc:name'.
|
static int |
FBC_20804
Error code 2020804:
The attribute 'fbc:id' on a <GeneProductAssociation> must be of the data type
'SId'.
|
static int |
FBC_20805
Error code 2020805:
A <GeneProductAssociation> object must have one and only one of the concrete
<Association> objects: <GeneProductRef>, <And> or <Or>.
|
static int |
FBC_20806
Error code 2020806:
The attribute 'fbc:name' on a <GeneProductAssociation> must be of the data type
'string'.
|
static int |
FBC_20901
Error code 2020901:
A <GeneProductRef> object may have the optional SBML Level 3 Core attributes
'metaid' and 'sboTerm'.
|
static int |
FBC_20902
Error code 2020902:
A <GeneProductRef> object may have the optional SBML Level 3 Core subobjects for
notes and annotations.
|
static int |
FBC_20903
Error code 2020903:
A <GeneProductRef> object must have the required attribute 'fbc:geneProduct' and
may have the optional attribute 'fbc:id'.
|
static int |
FBC_20904
Error code 2020904:
The attribute 'fbc:geneProduct' on a <GeneProductRef> must be of the data type
'SIdRef'.
|
static int |
FBC_20908
Error code 2020908:
The attribute 'fbc:geneProduct' on a <GeneProductRef> if set, must refer to 'id'
of a <GeneProduct> in the <Model>.
|
static int |
FBC_21001
Error code 2021001:
An <And> object may have the optional SBML Level 3 Core attributes 'metaid' and
'sboTerm'.
|
static int |
FBC_21002
Error code 2021002:
An <And> object may have the optional SBML Level 3 Core subobjects for notes and
annotations.
|
static int |
FBC_21003
Error code 2021003:
An <And> object must have two or more concrete <Association> objects:
<GeneProductRef>, <And>, or <Or>.
|
static int |
FBC_21101
Error code 2021101:
An <Or> object may have the optional SBML Level 3 Core attributes 'metaid' and
'sboTerm'.
|
static int |
FBC_21102
Error code 2021102:
An <Or> object may have the optional SBML Level 3 Core subobjects for notes and
annotations.
|
static int |
FBC_21103
Error code 2021103:
An <Or> object must have two or more concrete <Association> objects:
<GeneProductRef>, <And>, or <Or>.
|
static int |
FBC_21201
Error code 2021201:
A <GeneProduct> object may have the optional SBML Level 3 Core attributes
'metaid' and 'sboTerm'.
|
static int |
FBC_21202
Error code 2021202:
A <GeneProduct> object may have the optional SBML Level 3 Core subobjects for
notes and annotations.
|
static int |
FBC_21203
Error code 2021203:
A <GeneProduct> object must have the required attributes 'fbc:id' and
'fbc:label' may have the optional attributes 'fbc:name' and
'fbc:associatedSpecies'.
|
static int |
FBC_21204
Error code 2021204:
The attribute 'fbc:label' on a <GeneProduct> must be of the data type 'string'.
|
static int |
FBC_21205
Error code 2021205:
The attribute 'fbc:label' on a <GeneProduct> must be unique among the set of all
<GeneProduct> elements defined in the <Model>.
|
static int |
FBC_21206
Error code 2021206:
The attribute 'fbc:name' on a <GeneProduct> must be of the data type 'string'.
|
static int |
FBC_21207
Error code 2021207:
The attribute 'fbc:associatedSpecies' on a <GeneProduct> must be the identifier
of an existing <Species> defined in the enclosing <Model>.
|
static int |
GROUPS_10100
Error code 4010100:
|
static int |
GROUPS_10101
Error code 4010101:
To conform to the Groups Package specification for SBML Level 3 Version 1, an
SBML document must declare
'http://www.sbml.org/sbml/level3/version1/groups/version1' as the XMLNamespaceto
use for elements of this package.
|
static int |
GROUPS_10102
Error code 4010102:
Wherever they appear in an SBML document, elements and attributes from the
Groups Package must use the
'http://www.sbml.org/sbml/level3/version1/groups/version1' namespace, declaring
so either explicitly or implicitly.
|
static int |
GROUPS_10301
Error code 4010301:
(Extends validation rule #10301 in the SBML Level 3 Core specification.
|
static int |
GROUPS_10302
Error code 4010302:
The value of a 'groups:id' must conform to the syntax of the <sbml> data type
'SId' Reference: L3V1 Groups V1 Section 3.3.1
|
static int |
GROUPS_20101
Error code 4020101:
In all SBML documents using the Groups Package, the <sbml> object must have the
'groups:required' attribute.
|
static int |
GROUPS_20102
Error code 4020102:
The value of attribute 'groups:required' on the <sbml> object must be of data
type 'boolean'.
|
static int |
GROUPS_20103
Error code 4020103:
The value of attribute 'groups:required' on the <sbml> object must be set to
'false'.
|
static int |
GROUPS_20201
Error code 4020201:
A <model> object may contain one and only one instance of the <listOfGroups>
element.
|
static int |
GROUPS_20202
Error code 4020202:
The <listOfGroups> subobject on a <model> object is optional, but if present,
this container object must not be empty.
|
static int |
GROUPS_20203
Error code 4020203:
Apart from the general notes and annotations subobjects permitted on all SBML
objects, a <listOfGroups> container object may only contain <group> objects.
|
static int |
GROUPS_20204
Error code 4020204:
A <listOfGroups> object may have the optional SBML Level 3 Core attributes
'metaid' and 'sboTerm'.
|
static int |
GROUPS_20301
Error code 4020301:
A <group> object may have the optional SBML Level 3 Core attributes 'metaid' and
'sboTerm'.
|
static int |
GROUPS_20302
Error code 4020302:
A <group> object may have the optional SBML Level 3 Core subobjects for notes
and annotations.
|
static int |
GROUPS_20303
Error code 4020303:
A <group> object must have the required attribute 'groups:kind', and may have
the optional attributes 'groups:id' and 'groups:name'.
|
static int |
GROUPS_20304
Error code 4020304:
A <group> object may contain one and only one instance of the <listOfMembers>
element.
|
static int |
GROUPS_20305
Error code 4020305:
The value of the attribute 'groups:kind' of a <group> object must conform to the
syntax of SBML data type 'groupKind' and may only take on the allowed values of
'groupKind' defined in SBML; that is, the value must be one of the following:
'classification', 'partonomy' or 'collection'.
|
static int |
GROUPS_20306
Error code 4020306:
The attribute 'groups:name' on a <group> must have a value of data type
'string'.
|
static int |
GROUPS_20307
Error code 4020307:
The <listOfMembers> subobject on a <group> object is optional, but if present,
this container object must not be empty.
|
static int |
GROUPS_20308
Error code 4020308:
Apart from the general notes and annotations subobjects permitted on all SBML
objects, a <listOfMembers> container object may only contain <member> objects.
|
static int |
GROUPS_20309
Error code 4020309:
A <listOfMembers> object may have the optional SBML Level 3 Core attributes
'metaid' and 'sboTerm'.
|
static int |
GROUPS_20310
Error code 4020310:
A <listOfMembers> object may have the optional attributes 'groups:id' and
'groups:name'.
|
static int |
GROUPS_20311
Error code 4020311:
The attribute 'groups:name' on a <listOfMembers> must have a value of data type
'string'.
|
static int |
GROUPS_20312
Error code 4020312:
If <listOfMembers> objects from different <group> objects contain <member>
elements that reference the same SBase object, the 'sboTerm' attribute and any
child <notes> or <annotation> elements set for those <listOfMembers> should be
consistent, as they should all apply to the same referenced object.
|
static int |
GROUPS_20313
Error code 4020313:
Member references may not be circular: no <member>'s 'idRef' or 'metaIdRef' may
reference itself, its parent <listOfMembers>, nor its parent <group>.
|
static int |
GROUPS_20401
Error code 4020401:
A <member> object may have the optional SBML Level 3 Core attributes 'metaid'
and 'sboTerm'.
|
static int |
GROUPS_20402
Error code 4020402:
A <member> object may have the optional SBML Level 3 Core subobjects for notes
and annotations.
|
static int |
GROUPS_20403
Error code 4020403:
A <member> object may have the optional attributes 'groups:id' and 'groups:name'
and must have a value for one (and exactly one) of the attributes 'groups:idRef'
and 'groups:metaIdRef'.
|
static int |
GROUPS_20404
Error code 4020404:
The attribute 'groups:name' on a <member> must have a value of data type
'string'.
|
static int |
GROUPS_20405
Error code 4020405:
The value of the attribute 'groups:idRef' of a <member> object must be the
identifier of an existing <SBase> object defined in the enclosing <model>
object.
|
static int |
GROUPS_20406
Error code 4020406:
The value of the attribute 'groups:metaIdRef' of a <member> object must be the
'metaid' of an existing <SBase> object defined in the enclosing <model> object.
|
static int |
GROUPS_20407
Error code 4020407:
The value of the attribute 'groups:idRef' of a <member> object must conform to
the syntax of the SBML data type 'SId'.
|
static int |
GROUPS_20408
Error code 4020408:
The value of the attribute 'groups:metaIdRef' of a <member> object must conform
to the syntax of the SBML data type 'ID'.
|
static int |
LAYOUT_10100
Error code 6010100:
|
static int |
LAYOUT_10101
Error code 6010101:
To conform to Version 1 of the Layout package specification for SBML Level 3, an
SBML document must declare the use of the following XML Namespace:
'http://www.sbml.org/sbml/level3/version1/layout/version1' Reference: L3V1
Layout V1 Section 3.1
|
static int |
LAYOUT_10102
Error code 6010102:
Wherever they appear in an SBML document, elements and attributes from the
Layout package must be declared either implicitly or explicitly to be in the XML
namespace 'http://www.sbml.org/sbml/level3/version1/layout/version1' Reference:
L3V1 Layout V1 Section 3.1
|
static int |
LAYOUT_10301
Error code 6010301:
(Extends validation rule #10301 in the SBML Level 3 Version 1 Core
specification.) Within a <model> object the values of the attributes id and
layout:id on every instance of the following classes of objects must be unique
across the set of all id and layout:id attribute values of all such objects in a
model: the model itself, plus all contained <functionDefinition>, <compartment>,
<species>, <reaction>, <speciesReference>, <modifierSpeciesReference>, <event>,
and <parameter> objects, plus the <boundingBox>, <compartmentGlyph>,
<generalGlyph>, <graphicalObject>, <layout>, <speciesGlyph>,
<speciesReferenceGlyph>, <reactionGlyph>, <referenceGlyph> and <textGlyph>
objects defined by the Layout package.
|
static int |
LAYOUT_10302
Error code 6010302:
The value of the 'layout:id' attribute must conform to the SBML data type SId
Reference: L3V1 Layout V1 Section 3.3
|
static int |
LAYOUT_10401
Error code 6010401:
The attribute 'xsi:type' must be present on all <lineSegment> and <cubicBezier>
objects.
|
static int |
LAYOUT_10402
Error code 6010402:
The value of the 'xsi:type' attribute must be either 'LineSegment' or
'CubicBezier' appropriate to the object where it is located.
|
static int |
LAYOUT_20101
Error code 6020101:
In all SBML documents using the Layout package, the SBML object must include a
value for the attribute 'layout:required'.
|
static int |
LAYOUT_20102
Error code 6020102:
The value of attribute 'layout:required' on the SBML object must be of the data
type Boolean.
|
static int |
LAYOUT_20103
Error code 6020103:
The value of attribute 'layout:required' on the SBML object must be set to
'false'.
|
static int |
LAYOUT_20201
Error code 6020201:
There may be at most one instance of <listOfLayouts> element within a <model>
object using Layout.
|
static int |
LAYOUT_20202
Error code 6020202:
The <listOfLayouts> within a <model> object is optional, but if present, this
object must not be empty.
|
static int |
LAYOUT_20203
Error code 6020203:
Apart from the general notes and annotation subobjects permitted on all SBML
objects, a <listOfLayouts> container object may only contain <layout> objects.
|
static int |
LAYOUT_20204
Error code 6020204:
A <listOfLayouts> object may have the optional attributes 'metaid' and 'sboTerm'
defined by SBML Level 3 Core.
|
static int |
LAYOUT_20301
Error code 6020301:
A <layout> object may have the optional SBML Level 3 Core subobjects for notes
and annotations.
|
static int |
LAYOUT_20302
Error code 6020302:
A <layout> object may have the optional SBML Level 3 Core attributes 'metaid'
and 'sboTerm'.
|
static int |
LAYOUT_20303
Error code 6020303:
There may be at most one instance of each of the following kinds of objects
within a <layout> object: <listOfCompartmentGlyphs>, <listOfSpeciesGlyphs>,
<listOfReactionGlyphs>, <listOfTextGlyphs>, <listOfAdditionalGraphicalObjects>.
|
static int |
LAYOUT_20304
Error code 6020304:
The various ListOf subobjects within a <layout> object are optional, but if
present, these container object must not be empty.
|
static int |
LAYOUT_20305
Error code 6020305:
A <layout> object must have the required attribute 'layout:id' and may have the
optional attribute 'layout:name'.
|
static int |
LAYOUT_20306
Error code 6020306:
The attribute 'layout:name' of a <layout> must be of the data type 'string'.
|
static int |
LAYOUT_20307
Error code 6020307:
A <listOfCompartmentGlyphs> object may have the optional attributes 'metaid' and
'sboTerm' defined by SBML Level 3 Core.
|
static int |
LAYOUT_20308
Error code 6020308:
Apart from the general notes and annotation subobjects permitted on all SBML
objects, a <listOfCompartmentGlyphs> container object may only contain
<compartmentGlyph> objects.
|
static int |
LAYOUT_20309
Error code 6020309:
A <listOfSpeciesGlyphs> object may have the optional attributes 'metaid' and
'sboTerm' defined by SBML Level 3 Core.
|
static int |
LAYOUT_20310
Error code 6020310:
Apart from the general notes and annotation subobjects permitted on all SBML
objects, a <listOfSpeciesGlyphs> container object may only contain
<compartmentGlyph> objects.
|
static int |
LAYOUT_20311
Error code 6020311:
A <listOfReactionGlyphs> object may have the optional attributes 'metaid' and
'sboTerm' defined by SBML Level 3 Core.
|
static int |
LAYOUT_20312
Error code 6020312:
Apart from the general notes and annotation subobjects permitted on all SBML
objects, a <listOfReactionGlyphs> container object may only contain
<compartmentGlyph> objects.
|
static int |
LAYOUT_20313
Error code 6020313:
A <listOfAdditionalGraphicalObjectGlyphs> object may have the optional
attributes 'metaid' and 'sboTerm' defined by SBML Level 3 Core.
|
static int |
LAYOUT_20314
Error code 6020314:
Apart from the general notes and annotation subobjects permitted on all SBML
objects, a <listOfAdditionalGraphicalObjectGlyphs> container object may only
contain <compartmentGlyph> objects.
|
static int |
LAYOUT_20315
Error code 6020315:
A <layout> object must contain exactly one <dimensions> object.
|
static int |
LAYOUT_20316
Error code 6020316:
A <listOfTextGlyphs> object may have the optional attributes 'metaid' and
'sboTerm' defined by SBML Level 3 Core.
|
static int |
LAYOUT_20317
Error code 6020317:
Apart from the general notes and annotation subobjects permitted on all SBML
objects, a <listOfTextGlyphs> container object may only contain
<compartmentGlyph> objects.
|
static int |
LAYOUT_20401
Error code 6020401:
A <graphicalObject> object may have the optional SBML Level 3 Core subobjects
for notes and annotations.
|
static int |
LAYOUT_20402
Error code 6020402:
A <graphicalObject> object may have the optional SBML Level 3 Core attributes
'metaid' and 'sboTerm'.
|
static int |
LAYOUT_20403
Error code 6020403:
There may be at most one instance of a <boundingBox> object on a
<graphicalObject>.
|
static int |
LAYOUT_20404
Error code 6020404:
A <graphicalObject> object must have the required attribute 'layout:id' and may
have the optional attribute 'layout:metaidRef'.
|
static int |
LAYOUT_20405
Error code 6020405:
The attribute 'layout:metaidRef' of a <graphicalObject> must be of the data type
'IDREF'.
|
static int |
LAYOUT_20406
Error code 6020406:
The value of a 'layout:metaidRef' attribute of a <graphicalObject> must be of
the 'metaid' of an existing element in the <model>.
|
static int |
LAYOUT_20407
Error code 6020407:
A <graphicalObject> must contain exactly one <boundingBox> object.
|
static int |
LAYOUT_20501
Error code 6020501:
A <compartmentGlyph> object may have the optional SBML Level 3 Core subobjects
for notes and annotations.
|
static int |
LAYOUT_20502
Error code 6020502:
A <compartmentGlyph> object may have the optional SBML Level 3 Core attributes
'metaid' and 'sboTerm'.
|
static int |
LAYOUT_20503
Error code 6020503:
There may be at most one instance of a <boundingBox> object on a
<compartmentGlyph>.
|
static int |
LAYOUT_20504
Error code 6020504:
A <compartmentGlyph> object must have the required attribute 'layout:id' and may
have the optional attributes 'layout:metaidRef' or 'layout:compartment'.
|
static int |
LAYOUT_20505
Error code 6020505:
The attribute 'layout:metaidRef' of a <compartmentGlyph> must be of the data
type 'IDREF'.
|
static int |
LAYOUT_20506
Error code 6020506:
The value of a 'layout:metaidRef' attribute of a <compartmentGlyph> must be of
the 'metaid' of an existing element in the <model>.
|
static int |
LAYOUT_20507
Error code 6020507:
The attribute 'layout:compartment' of a <compartmentGlyph> must be the data type
'SIdRef'.
|
static int |
LAYOUT_20508
Error code 6020508:
The value of the 'layout:compartment' attribute of a <compartmentGlyph> must be
of the 'id' of an existing <compartment> in the <model>.
|
static int |
LAYOUT_20509
Error code 6020509:
If both attributes 'layout:compartment' and 'layout:metaidRef' are specified on
a <compartmentGlyph> they have to reference the same <compartment> in the
<model>.
|
static int |
LAYOUT_20510
Error code 6020510:
The attribute 'layout:order' of a <compartmentGlyph> must be the data type
'double'.
|
static int |
LAYOUT_20601
Error code 6020601:
A <speciesGlyph> object may have the optional SBML Level 3 Core subobjects for
notes and annotations.
|
static int |
LAYOUT_20602
Error code 6020602:
A <speciesGlyph> object may have the optional SBML Level 3 Core attributes
'metaid' and 'sboTerm'.
|
static int |
LAYOUT_20603
Error code 6020603:
There may be at most one instance of a <boundingBox> object on a <speciesGlyph>.
|
static int |
LAYOUT_20604
Error code 6020604:
A <speciesGlyph> object must have the required attribute 'layout:id' and may
have the optional attributes 'layout:metaidRef' or 'layout:species'.
|
static int |
LAYOUT_20605
Error code 6020605:
The attribute 'layout:metaidRef' of a <speciesGlyph> must be of the data type
'IDREF'.
|
static int |
LAYOUT_20606
Error code 6020606:
The value of a 'layout:metaidRef' attribute of a <speciesGlyph> must be of the
'metaid' of an existing element in the <model>.
|
static int |
LAYOUT_20607
Error code 6020607:
The attribute 'layout:species' of a <speciesGlyph> must be the data type
'SIdRef'.
|
static int |
LAYOUT_20608
Error code 6020608:
The value of the 'layout:species' attribute of a <speciesGlyph> must be of the
'id' of an existing <species> in the <model>.
|
static int |
LAYOUT_20609
Error code 6020609:
If both attributes 'layout:species' and 'layout:metaidRef' are specified on a
<speciesGlyph> they have to reference the same <species> in the <model>.
|
static int |
LAYOUT_20701
Error code 6020701:
A <reactionGlyph> object may have the optional SBML Level 3 Core subobjects for
notes and annotations.
|
static int |
LAYOUT_20702
Error code 6020702:
A <reactionGlyph> object may have the optional SBML Level 3 Core attributes
'metaid' and 'sboTerm'.
|
static int |
LAYOUT_20703
Error code 6020703:
There may be at most one instance of each of the following kinds of objects
within a <reactionGlyph> object: <boundingBox>, and <curve> and there must be
one instance of the <listOfSpeciesReferenceGlyphs>.
|
static int |
LAYOUT_20704
Error code 6020704:
A <reactionGlyph> object must have the required attribute 'layout:id' and may
have the optional attributes 'layout:metaidRef' or 'layout:reaction'.
|
static int |
LAYOUT_20705
Error code 6020705:
The attribute 'layout:metaidRef' of a <reactionGlyph> must be of the data type
'IDREF'.
|
static int |
LAYOUT_20706
Error code 6020706:
The value of a 'layout:metaidRef' attribute of a <reactionGlyph> must be of the
'metaid' of an existing element in the <model>.
|
static int |
LAYOUT_20707
Error code 6020707:
The attribute 'layout:reaction' of a <reactionGlyph> must be the data type
'SIdRef'.
|
static int |
LAYOUT_20708
Error code 6020708:
The value of the 'layout:reaction' attribute of a <reactionGlyph> must be of the
'id' of an existing <reaction> in the <model>.
|
static int |
LAYOUT_20709
Error code 6020709:
If both attributes 'layout:reaction' and 'layout:metaidRef' are specified on a
<reactionGlyph> they have to reference the same <reaction> in the <model>.
|
static int |
LAYOUT_20710
Error code 6020710:
Apart from the general notes and annotation subobjects permitted on all SBML
objects, a <listOfSpeciesReferenceGlyphs> container object may only contain
<speciesReferenceGlyph> objects.
|
static int |
LAYOUT_20711
Error code 6020711:
A <listOfSpeciesReferenceGlyphs> object may have the optional attributes
'metaid' and 'sboTerm' defined by SBML Level 3 Core.
|
static int |
LAYOUT_20712
Error code 6020712:
A <listOfSpeciesReferenceGlyphs> container object must not be empty.
|
static int |
LAYOUT_20801
Error code 6020801:
A <generalGlyph> object may have the optional SBML Level 3 Core subobjects for
notes and annotations.
|
static int |
LAYOUT_20802
Error code 6020802:
A <generalGlyph> object may have the optional SBML Level 3 Core attributes
'metaid' and 'sboTerm'.
|
static int |
LAYOUT_20803
Error code 6020803:
There may be at most one instance of each of the following kinds of objects
within a <generalGlyph> object: <boundingBox>, <curve>, <listOfReferenceGlyphs>
and <listOfSubGlyphs>.
|
static int |
LAYOUT_20804
Error code 6020804:
A <generalGlyph> object must have the required attribute 'layout:id' and may
have the optional attributes 'layout:metaidRef' or 'layout:reference'.
|
static int |
LAYOUT_20805
Error code 6020805:
The attribute 'layout:metaidRef' of a <generalGlyph> must be of the data type
'IDREF'.
|
static int |
LAYOUT_20806
Error code 6020806:
The value of a 'layout:metaidRef' attribute of a <generalGlyph> must be of the
'metaid' of an existing element in the <model>.
|
static int |
LAYOUT_20807
Error code 6020807:
The attribute 'layout:reference' of a <generalGlyph> must be the data type
'SIdRef'.
|
static int |
LAYOUT_20808
Error code 6020808:
The value of the 'layout:reference' attribute of a <generalGlyph> must be of the
'id' of an existing element in the <model>.
|
static int |
LAYOUT_20809
Error code 6020809:
If both attributes 'layout:reference' and 'layout:metaidRef' are specified on a
<generalGlyph> they have to reference the same element in the <model>.
|
static int |
LAYOUT_20810
Error code 6020810:
Apart from the general notes and annotation subobjects permitted on all SBML
objects, a <listOfReferenceGlyphs> container object may only contain
<referenceGlyph> objects.
|
static int |
LAYOUT_20811
Error code 6020811:
A <listOfReferenceGlyphs> object may have the optional attributes 'metaid' and
'sboTerm' defined by SBML Level 3 Core.
|
static int |
LAYOUT_20812
Error code 6020812:
|
static int |
LAYOUT_20813
Error code 6020813:
A <listOfSubGlyphs> object may have the optional attributes 'metaid' and
'sboTerm' defined by SBML Level 3 Core.
|
static int |
LAYOUT_20901
Error code 6020901:
A <textGlyph> object may have the optional SBML Level 3 Core subobjects for
notes and annotations.
|
static int |
LAYOUT_20902
Error code 6020902:
A <textGlyph> object may have the optional SBML Level 3 Core attributes 'metaid'
and 'sboTerm'.
|
static int |
LAYOUT_20903
Error code 6020903:
A <textGlyph> must contain exactly one <boundingBox> object.
|
static int |
LAYOUT_20904
Error code 6020904:
A <textGlyph> object must have the required attribute 'layout:id' and may have
the optional attributes 'layout:metaidRef', 'layout:graphicalObject',
'layout:text' and 'layout:originOfText'.
|
static int |
LAYOUT_20905
Error code 6020905:
The attribute 'layout:metaidRef' of a <textGlyph> must be of the data type
'IDREF'.
|
static int |
LAYOUT_20906
Error code 6020906:
The value of a 'layout:metaidRef' attribute of a <textGlyph> must be of the
'metaid' of an existing element in the <model>.
|
static int |
LAYOUT_20907
Error code 6020907:
The attribute 'layout:originOfText' of a <textGlyph> must be the data type
'SIdRef'.
|
static int |
LAYOUT_20908
Error code 6020908:
The value of the 'layout:originOfText' attribute of a <textGlyph> must be of the
'id' of an existing element in the <model>.
|
static int |
LAYOUT_20909
Error code 6020909:
If both attributes 'layout:originOfText' and 'layout:metaidRef' are specified on
a <textGlyph> they have to reference the same element in the <model>.
|
static int |
LAYOUT_20910
Error code 6020910:
The attribute 'layout:graphicalObject' of a <textGlyph> must be the data type
'SIdRef'.
|
static int |
LAYOUT_20911
Error code 6020911:
The value of the 'layout:graphicalObject' attribute of a <textGlyph> must be of
the 'id' of an existing <graphicalObject> (or derived) element in the <layout>.
|
static int |
LAYOUT_20912
Error code 6020912:
The attribute 'layout:text' of a <textGlyph> must be the data type 'string'.
|
static int |
LAYOUT_21001
Error code 6021001:
A <speciesReferenceGlyph> object may have the optional SBML Level 3 Core
subobjects for notes and annotations.
|
static int |
LAYOUT_21002
Error code 6021002:
A <speciesReferenceGlyph> object may have the optional SBML Level 3 Core
attributes 'metaid' and 'sboTerm'.
|
static int |
LAYOUT_21003
Error code 6021003:
A <speciesReferenceGlyph> may have at most one instance of a <boundingBox> and
<curve> object.
|
static int |
LAYOUT_21004
Error code 6021004:
A <speciesReferenceGlyph> object must have the required attribute 'layout:id'
and may have the optional attributes 'layout:metaidRef',
'layout:speciesReference' and 'layout:role'.
|
static int |
LAYOUT_21005
Error code 6021005:
The attribute 'layout:metaidRef' of a <speciesReferenceGlyph> must be of the
data type 'IDREF'.
|
static int |
LAYOUT_21006
Error code 6021006:
The value of a 'layout:metaidRef' attribute of a <speciesReferenceGlyph> must be
of the 'metaid' of an existing element in the <model>.
|
static int |
LAYOUT_21007
Error code 6021007:
The attribute 'layout:speciesReference' of a <speciesReferenceGlyph> must be the
data type 'SIdRef'.
|
static int |
LAYOUT_21008
Error code 6021008:
The value of the 'layout:speciesReference' attribute of a
<speciesReferenceGlyph> must be of the 'id' of an existing <speciesReference> in
the <model>.
|
static int |
LAYOUT_21009
Error code 6021009:
If both attributes 'layout:speciesReference' and 'layout:metaidRef' are
specified on a <speciesReferenceGlyph> they have to reference the same
<speciesReference> in the <model>.
|
static int |
LAYOUT_21010
Error code 6021010:
The attribute 'layout:speciesGlyph' of a <speciesReferenceGlyph> must be the
data type 'SIdRef'.
|
static int |
LAYOUT_21011
Error code 6021011:
The value of the 'layout:speciesGlyph' attribute of a <speciesReferenceGlyph>
must be of the 'id' of an existing <speciesGlyph> element in the <layout>.
|
static int |
LAYOUT_21012
Error code 6021012:
The attribute 'layout:role' of a <speciesReferenceGlyph> must be of data type
'SpeciesReferenceRole', i.e.
|
static int |
LAYOUT_21101
Error code 6021101:
A <referenceGlyph> object may have the optional SBML Level 3 Core subobjects for
notes and annotations.
|
static int |
LAYOUT_21102
Error code 6021102:
A <referenceGlyph> object may have the optional SBML Level 3 Core attributes
'metaid' and 'sboTerm'.
|
static int |
LAYOUT_21103
Error code 6021103:
There may be at most one instance of a <boundingBox> and <curve> object on a
<referenceGlyph>.
|
static int |
LAYOUT_21104
Error code 6021104:
A <referenceGlyph> object must have the required attributes 'layout:id' and
'layout:glyph' and may have the optional attributes 'layout:metaidRef',
'layout:reference' and 'layout:role'.
|
static int |
LAYOUT_21105
Error code 6021105:
The attribute 'layout:metaidRef' of a <referenceGlyph> must be of the data type
'IDREF'.
|
static int |
LAYOUT_21106
Error code 6021106:
The value of a 'layout:metaidRef' attribute of a <referenceGlyph> must be of the
'metaid' of an existing element in the <model>.
|
static int |
LAYOUT_21107
Error code 6021107:
The attribute 'layout:reference' of a <referenceGlyph> must be the data type
'SIdRef'.
|
static int |
LAYOUT_21108
Error code 6021108:
The value of the 'layout:reference' attribute of a <referenceGlyph> must be of
the 'id' of an existing element in the <model>.
|
static int |
LAYOUT_21109
Error code 6021109:
If both attributes 'layout:reference' and 'layout:metaidRef' are specified on a
<referenceGlyph> they have to reference the same element in the <model>.
|
static int |
LAYOUT_21110
Error code 6021110:
The attribute 'layout:glyph' of a <referenceGlyph> must be the data type
'SIdRef'.
|
static int |
LAYOUT_21111
Error code 6021111:
The value of the 'layout:glyph' attribute of a <referenceGlyph> must be of the
'id' of an existing <graphicalObject> (or derived) element in the <layout>.
|
static int |
LAYOUT_21112
Error code 6021112:
The attribute 'layout:role' of a <referenceGlyph> must be the data type
'string'.
|
static int |
LAYOUT_21201
Error code 6021201:
A <point> object may have the optional SBML Level 3 Core subobjects for notes
and annotations.
|
static int |
LAYOUT_21202
Error code 6021202:
A <point> object may have the optional SBML Level 3 Core attributes 'metaid' and
'sboTerm'.
|
static int |
LAYOUT_21203
Error code 6021203:
A <point> object must have the required attributes 'layout:x' and 'layout:y' and
may have the optional attributes 'layout:id', and 'layout:z'.
|
static int |
LAYOUT_21204
Error code 6021204:
The attributes 'layout:x', 'layout:y' and 'layout:z' of a <point> element must
be of the data type 'double'.
|
static int |
LAYOUT_21301
Error code 6021301:
A <boundingBox> object may have the optional SBML Level 3 Core subobjects for
notes and annotations.
|
static int |
LAYOUT_21302
Error code 6021302:
A <boundingBox> object may have the optional SBML Level 3 Core attributes
'metaid' and 'sboTerm'.
|
static int |
LAYOUT_21303
Error code 6021303:
There must be exactly one instance of a <point> and a <dimensions> object on a
<boundingBox>.
|
static int |
LAYOUT_21304
Error code 6021304:
A <boundingBox> object may have the optional attributes 'layout:id'.
|
static int |
LAYOUT_21305
Error code 6021305:
If the 'layout:z' attribute on a <point> element of a <boundingBox> is not
specified, the attribute 'layout:depth' must not be specified.
|
static int |
LAYOUT_21401
Error code 6021401:
A <curve> object may have the optional SBML Level 3 Core subobjects for notes
and annotations.
|
static int |
LAYOUT_21402
Error code 6021402:
A <curve> object may have the optional SBML Level 3 Core attributes 'metaid' and
'sboTerm'.
|
static int |
LAYOUT_21403
Error code 6021403:
There must be exactly one instance of a <listOfCurveSegments> object on a
<curve>.
|
static int |
LAYOUT_21404
Error code 6021404:
No attributes from the Layout namespace are permitted on a <curve>.
|
static int |
LAYOUT_21405
Error code 6021405:
A <listOfCurveSegments> object may have the optional attributes 'metaid' and
'sboTerm' defined by SBML Level 3 Core.
|
static int |
LAYOUT_21406
Error code 6021406:
Apart from the general notes and annotation subobjects permitted on all SBML
objects, a <listOfCurveSegments> container object may only contain
<referenceGlyph> objects.
|
static int |
LAYOUT_21407
Error code 6021407:
A <listOfCurveSegments> container object may not be empty.
|
static int |
LAYOUT_21501
Error code 6021501:
A <lineSegment> object may have the optional SBML Level 3 Core subobjects for
notes and annotations.
|
static int |
LAYOUT_21502
Error code 6021502:
A <lineSegment> object may have the optional SBML Level 3 Core attributes
'metaid' and 'sboTerm'.
|
static int |
LAYOUT_21503
Error code 6021503:
A <lineSegment> must specify two <point> elements 'start' and 'end'.
|
static int |
LAYOUT_21504
Error code 6021504:
No attributes from the Layout namespace are permitted on a <lineSegment>.
|
static int |
LAYOUT_21601
Error code 6021601:
A <cubicBezier> object may have the optional SBML Level 3 Core subobjects for
notes and annotations.
|
static int |
LAYOUT_21602
Error code 6021602:
A <cubicBezier> object may have the optional SBML Level 3 Core attributes
'metaid' and 'sboTerm'.
|
static int |
LAYOUT_21603
Error code 6021603:
A <cubicBezier> must specify four <point> elements 'start' 'basePoint1',
'basePoint2' and 'end'.
|
static int |
LAYOUT_21604
Error code 6021604:
No attributes from the Layout namespace are permitted on a <cubicBezier>.
|
static int |
LAYOUT_21701
Error code 6021701:
A <dimensions> object may have the optional SBML Level 3 Core subobjects for
notes and annotations.
|
static int |
LAYOUT_21702
Error code 6021702:
A <dimensions> object may have the optional SBML Level 3 Core attributes
'metaid' and 'sboTerm'.
|
static int |
LAYOUT_21703
Error code 6021703:
A <dimensions> object must have the required attributes 'layout:width' and
'layout:height' and may have the optional attributes 'layout:id', and
'layout:depth'.
|
static int |
LAYOUT_21704
Error code 6021704:
The attributes 'layout:width', 'layout:height' and 'layout:depth' of a
<dimensions> element must be of the data type 'double'.
|
static int |
MULTI_10101
To conform to Version 1 of the Multi package specification for SBML Level 3, an SBML
document must declare the use of the following XML Namespace:
“http://www.sbml.org/sbml/level3/version1/multi/version1” (Reference: SBML Level 3
Package Specification for Multi, Version 1, Section 3.1 on page 9).
|
static int |
MULTI_10102
Wherever they appear in an SBML document, elements and attributes from the Multi package
must be declared either implicitly or explicitly to be in the XML namespace
“http://www.sbml.org/sbml/level3/version1/multi/version1” (Reference: SBML Level 3
Package Specification for Multi, Version 1, Section 3.1 on page 9).
|
static int |
MULTI_10103 |
static int |
MULTI_10104 |
static int |
MULTI_10105 |
static int |
MULTI_10301 |
static int |
MULTI_10302 |
static int |
MULTI_10303 |
static int |
MULTI_10401 |
static int |
MULTI_10402 |
static int |
MULTI_10403 |
static int |
MULTI_10404 |
static int |
MULTI_10405 |
static int |
MULTI_10406 |
static int |
MULTI_10408 |
static int |
MULTI_10501 |
static int |
MULTI_10502 |
static int |
MULTI_10503 |
static int |
MULTI_10504 |
static int |
MULTI_10505 |
static int |
MULTI_10506 |
static int |
MULTI_10508 |
static int |
MULTI_10509 |
static int |
MULTI_10601 |
static int |
MULTI_10602 |
static int |
MULTI_10603 |
static int |
MULTI_10604 |
static int |
MULTI_10605 |
static int |
MULTI_10701 |
static int |
MULTI_10702 |
static int |
MULTI_10703 |
static int |
MULTI_10704 |
static int |
MULTI_10801 |
static int |
MULTI_10802 |
static int |
MULTI_20101 |
static int |
MULTI_20102 |
static int |
MULTI_20103 |
static int |
MULTI_20104 |
static int |
MULTI_20201 |
static int |
MULTI_20202 |
static int |
MULTI_20203 |
static int |
MULTI_20204 |
static int |
MULTI_20205 |
static int |
MULTI_20206 |
static int |
MULTI_20207 |
static int |
MULTI_20208 |
static int |
MULTI_20209 |
static int |
MULTI_20301 |
static int |
MULTI_20302 |
static int |
MULTI_20303 |
static int |
MULTI_20304 |
static int |
MULTI_20305 |
static int |
MULTI_20401 |
static int |
MULTI_20402 |
static int |
MULTI_20403 |
static int |
MULTI_20404 |
static int |
MULTI_20405 |
static int |
MULTI_20406 |
static int |
MULTI_20407 |
static int |
MULTI_20408 |
static int |
MULTI_20409 |
static int |
MULTI_20410 |
static int |
MULTI_20411 |
static int |
MULTI_20412 |
static int |
MULTI_20413 |
static int |
MULTI_20414 |
static int |
MULTI_20415 |
static int |
MULTI_20416 |
static int |
MULTI_20417 |
static int |
MULTI_20501 |
static int |
MULTI_20601 |
static int |
MULTI_20602 |
static int |
MULTI_20603 |
static int |
MULTI_20604 |
static int |
MULTI_20605 |
static int |
MULTI_20606 |
static int |
MULTI_20607 |
static int |
MULTI_20608 |
static int |
MULTI_20701 |
static int |
MULTI_20702 |
static int |
MULTI_20703 |
static int |
MULTI_20704 |
static int |
MULTI_20801 |
static int |
MULTI_20802 |
static int |
MULTI_20803 |
static int |
MULTI_20805 |
static int |
MULTI_20806 |
static int |
MULTI_20901 |
static int |
MULTI_20902 |
static int |
MULTI_20903 |
static int |
MULTI_20904 |
static int |
MULTI_20907 |
static int |
MULTI_21101 |
static int |
MULTI_21102 |
static int |
MULTI_21103 |
static int |
MULTI_21104 |
static int |
MULTI_21105 |
static int |
MULTI_21106 |
static int |
MULTI_21201 |
static int |
MULTI_21202 |
static int |
MULTI_21203 |
static int |
MULTI_21204 |
static int |
MULTI_21205 |
static int |
MULTI_21206 |
static int |
MULTI_21207 |
static int |
MULTI_21208 |
static int |
MULTI_21209 |
static int |
MULTI_21210 |
static int |
MULTI_21211 |
static int |
MULTI_21212 |
static int |
MULTI_21301 |
static int |
MULTI_21302 |
static int |
MULTI_21303 |
static int |
MULTI_21304 |
static int |
MULTI_21305 |
static int |
MULTI_21306 |
static int |
MULTI_21401 |
static int |
MULTI_21402 |
static int |
MULTI_21403 |
static int |
MULTI_21404 |
static int |
MULTI_21405 |
static int |
MULTI_21406 |
static int |
MULTI_21407 |
static int |
MULTI_21408 |
static int |
MULTI_21409 |
static int |
MULTI_21410 |
static int |
MULTI_21501 |
static int |
MULTI_21502 |
static int |
MULTI_21503 |
static int |
MULTI_21504 |
static int |
MULTI_21601 |
static int |
MULTI_21602 |
static int |
MULTI_21701 |
static int |
MULTI_21702 |
static int |
MULTI_21801 |
static int |
MULTI_21802 |
static int |
MULTI_21803 |
static int |
MULTI_21901 |
static int |
MULTI_21902 |
static int |
MULTI_21903 |
static int |
MULTI_21904 |
static int |
MULTI_21905 |
static int |
MULTI_21906 |
static int |
MULTI_22101 |
static int |
MULTI_22102 |
static int |
MULTI_22103 |
static int |
QUAL_10100
Error code 3010100:
|
static int |
QUAL_10101
Error code 3010101:
To conform to Version 1 of the Qualitative Models package specification for SBML
Level 3, an SBML document must declare the use of the following XML Namespace:
'http://www.sbml.org/sbml/level3/version1/qual/version1' Reference: L3V1 Qual V1
Section 3.1
|
static int |
QUAL_10102
Error code 3010102:
Wherever they appear in an SBML document, elements and attributes from the
Qualitative Models package must be declared either implicitly or explicitly to
be in the XML namespace 'http://www.sbml.org/sbml/level3/version1/qual/version1'
Reference: L3V1 Qual V1 Section 3.1
|
static int |
QUAL_10201
Error code 3010201:
The MathML <math> element in a <functionTerm> object should evaluate to a value
of type boolean.
|
static int |
QUAL_10202
Error code 3010202:
The MathML <math> element in a <functionTerm> object should not use the
<csymbol> elements 'time' and 'delay' as these explicitly introduce time into
the model.
|
static int |
QUAL_10301
Error code 3010301:
(Extends validation rule #10301 in the SBML Level 3 Version 1 Core
specification.) Within a <model> the values of the attributes 'id' and 'qual:id'
on every instance of the following classes of objects must be unique across the
set of all 'id' and 'qual:id' attribute values of all such objects in a model:
the <model> itself, plus all contained <functionDefinition>, <compartment>,
<species>, <reaction>, <speciesReference>, <modifierSpeciesReference>, <event>,
and <parameter> objects, plus the <qualitativeSpecies>, <transition>, <input>
and <output> objects defined by the Qualitative Models package.
|
static int |
QUAL_20101
Error code 3020101:
In all SBML documents using the Qualitative Models package, the SBML object must
include a value for the attribute 'qual:required' attribute.
|
static int |
QUAL_20102
Error code 3020102:
The value of attribute 'qual:required' on the SBML object must be of the data
type Boolean.
|
static int |
QUAL_20103
Error code 3020103:
The value of attribute 'qual:required' on the SBML object must be set to 'true'
if if the model contains any <transition> objects.
|
static int |
QUAL_20201
Error code 3020201:
There may be at most one instance of each of the following kinds of objects
within a <model> object using Qualitative Models: <listOfTransitions> and
<listOfQualitativeSpecies>.
|
static int |
QUAL_20202
Error code 3020202:
The various ListOf subobjects with a <model> object are optional, but if
present, these container object must not be empty.
|
static int |
QUAL_20203
Error code 3020203:
Apart from the general notes and annotation subobjects permitted on all SBML
objects, a <listOfTransitions> container object may only contain <transition>
objects.
|
static int |
QUAL_20204
Error code 3020204:
Apart from the general notes and annotation subobjects permitted on all SBML
objects, a <listOfQualitativeSpecies> container object may only contain
<qualitativeSpecies> objects.
|
static int |
QUAL_20205
Error code 3020205:
A <listOfQualitativeSpecies> object may have the optional 'metaid' and 'sboTerm'
defined by SBML Level 3 Core.
|
static int |
QUAL_20206
Error code 3020206:
A <listOfTransitions> object may have the optional 'metaid' and 'sboTerm'
defined by SBML Level 3 Core.
|
static int |
QUAL_20301
Error code 3020301:
A <qualitativeSpecies> object may have the optional 'metaid' and 'sboTerm'
defined by SBML Level 3 Core.
|
static int |
QUAL_20302
Error code 3020302:
A <qualitativeSpecies> object may have the optional SBML Level 3 Core subobjects
for notes and annotations.
|
static int |
QUAL_20303
Error code 3020303:
A <qualitativeSpecies> object must have the required attributes 'qual:id',
'qual:compartment' and 'qual:constant', and may have the optional attributes
'qual:name', 'qual:initialLevel' and 'qual:maxLevel'.
|
static int |
QUAL_20304
Error code 3020304:
The attribute 'qual:constant' in <qualitativeSpecies> must be of the data type
boolean.
|
static int |
QUAL_20305
Error code 3020305:
The attribute 'qual:name' in <qualitativeSpecies> must be of the data type
string.
|
static int |
QUAL_20306
Error code 3020306:
The attribute 'qual:initialLevel' in <qualitativeSpecies> must be of the data
type integer.
|
static int |
QUAL_20307
Error code 3020307:
The attribute 'qual:maxLevel' in <qualitativeSpecies> must be of the data type
integer.
|
static int |
QUAL_20308
Error code 3020308:
The value of the attribute 'qual:compartment' in a <qualitativeSpecies> object
must be the identifier of an existing <compartment> object defined in the
enclosing <model> object.
|
static int |
QUAL_20309
Error code 3020309:
The value of the attribute 'qual:initialLevel' in a <qualitativeSpecies> object
cannot be greater than the value of the 'qual:maxLevel' attribute for the given
<qualitativeSpecies> object.
|
static int |
QUAL_20310
Error code 3020310:
A <qualitativeSpecies> with attribute 'qual:constant' set to 'true' can only be
referred to by an <input>.
|
static int |
QUAL_20311
Error code 3020311:
A <qualitativeSpecies> that is referenced by an <output> with the
'qual:transitionEffect' attribute set to 'assignmentLevel' should not be
referenced by any other <output> with the same 'transitionEffect' throughout the
set of transitions for the containing model.
|
static int |
QUAL_20312
Error code 3020312:
The attribute 'qual:initialLevel' in <qualitativeSpecies> must not be negative.
|
static int |
QUAL_20313
Error code 3020313:
The attribute 'qual:maxLevel' in <qualitativeSpecies> must not be negative.
|
static int |
QUAL_20401
Error code 3020401:
A <transition> object may have the optional 'metaid' and 'sboTerm' defined by
SBML Level 3 Core.
|
static int |
QUAL_20402
Error code 3020402:
A <transition> object may have the optional SBML Level 3 Core subobjects for
notes and annotations.
|
static int |
QUAL_20403
Error code 3020403:
A <transition> object may have the optional attributes 'qual:name' and
'qual:id'.
|
static int |
QUAL_20404
Error code 3020404:
The attribute 'qual:name' in <transition> must be of the data type string.
|
static int |
QUAL_20405
Error code 3020405:
A <transition> must have one and only one instance of the <listOfFunctionTerms>
objects and may have at most one instance of the <listOfInputs> and
<listOfOutputs> objects from the Qualitative Models namespace.
|
static int |
QUAL_20406
Error code 3020406:
The <listOfInputs> and <listOfOutputs> subobjects on a <transition> object are
optional, but if present, these container object must not be empty.
|
static int |
QUAL_20407
Error code 3020407:
Apart from the general notes and annotation subobjects permitted on all SBML
objects, a <listOfInputs> container object may only contain <input> objects.
|
static int |
QUAL_20408
Error code 3020408:
Apart from the general notes and annotation subobjects permitted on all SBML
objects, a <listOfOutputs> container object may only contain <output> objects.
|
static int |
QUAL_20409
Error code 3020409:
Apart from the general notes and annotation subobjects permitted on all SBML
objects, a <listOfFunctionTerms> container object must contain one and only one
<defaultTerm> object and then may only contain <functionTerm> objects.
|
static int |
QUAL_20410
Error code 3020410:
A <listOfInputs> object may have the optional 'metaid' and 'sboTerm' defined by
SBML Level 3 Core.
|
static int |
QUAL_20411
Error code 3020411:
A <listOfOutputs> object may have the optional 'metaid' and 'sboTerm' defined by
SBML Level 3 Core.
|
static int |
QUAL_20412
Error code 3020412:
A <listOfFunctionTerms> object may have the optional 'metaid' and 'sboTerm'
defined by SBML Level 3 Core.
|
static int |
QUAL_20413
Error code 3020413:
No element of the <listOfFunctionTerms> object may cause the level of a
<qualitativeSpecies> to exceed the value 'qual:maxLevel' attribute.
|
static int |
QUAL_20414
Error code 3020414:
No element of the <listOfFunctionTerms> object may cause the level of a
<qualitativeSpecies> to become negative.
|
static int |
QUAL_20501
Error code 3020501:
An <input> object may have the optional 'metaid' and 'sboTerm' defined by SBML
Level 3 Core.
|
static int |
QUAL_20502
Error code 3020502:
An <input> object may have the optional SBML Level 3 Core subobjects for notes
and annotations.
|
static int |
QUAL_20503
Error code 3020503:
An <input> object must have the required attributes 'qual:qualitativeSpecies' as
well as 'qual:transitionEffect' and may have the optional attributes 'qual:id',
'qual:name', 'qual:sign' and 'qual:thresholdLevel'.
|
static int |
QUAL_20504
Error code 3020504:
The attribute 'qual:name' in <input> must be of the data type string.
|
static int |
QUAL_20505
Error code 3020505:
The value of the attribute 'qual:sign' of an <input> object must conform to the
syntax of the SBML data type 'sign' and may only take on the allowed values of
'sign' defined in SBML; that is, the value must be one of the following:
'positive', 'negative', 'dual' or 'unknown'.
|
static int |
QUAL_20506
Error code 3020506:
The value of the attribute 'qual:transitionEffect' of an <input> object must
conform to the syntax of the SBML data type 'transitionInputEffect' and may only
take on the allowed values of 'transitionInputEffect' defined in SBML; that is,
the value must be one of the following: 'none' or 'consumption'.
|
static int |
QUAL_20507
Error code 3020507:
The attribute 'qual:thresholdLevel' in <input> must be of the data type
'integer'.
|
static int |
QUAL_20508
Error code 3020508:
The value of the attribute 'qual:qualitativeSpecies' in an <input> object must
be the identifier of an existing <qualitativeSpecies> object defined in the
enclosing <model> object.
|
static int |
QUAL_20509
Error code 3020509:
An <input> that refers to a <qualitativeSpecies> that has a 'qual:constant'
attribute set to 'true' cannot have the attribute 'qual:transitionEffect' set to
'consumption'.
|
static int |
QUAL_20510
Error code 3020510:
The attribute 'qual:thresholdLevel' in <input> must not be negative.
|
static int |
QUAL_20601
Error code 3020601:
An <output> object may have the optional 'metaid' and 'sboTerm' defined by SBML
Level 3 Core.
|
static int |
QUAL_20602
Error code 3020602:
An <output> object may have the optional SBML Level 3 Core subobjects for notes
and annotations.
|
static int |
QUAL_20603
Error code 3020603:
An <output> object must have the required attributes 'qual:qualitativeSpecies'
as well as 'qual:transitionEffect' and may have the optional attributes
'qual:id', 'qual:name' and 'qual:outputLevel'.
|
static int |
QUAL_20604
Error code 3020604:
The attribute 'qual:name' in <output> must be of the data type string.
|
static int |
QUAL_20605
Error code 3020605:
The value of the attribute 'qual:transitionEffect' of an <output> object must
conform to the syntax of the SBML data type 'transitionOutputEffect' and may
only take on the allowed values of 'transitionOutputEffect' defined in SBML;
that is, the value must be one of the following: 'production' or
'assignmentLevel'.
|
static int |
QUAL_20606
Error code 3020606:
The attribute 'qual:outputLevel' in <output> must be of the data type 'integer'.
|
static int |
QUAL_20607
Error code 3020607:
The value of the attribute 'qual:qualitativeSpecies' in an <output> object must
be the identifier of an existing <qualitativeSpecies> object defined in the
enclosing <model> object.
|
static int |
QUAL_20608
Error code 3020608:
The <qualitativeSpecies> referred to by the attribute 'qual:qualitativeSpecies'
in an <output> object must have the value of its 'qual:constant' attribute set
to 'false'.
|
static int |
QUAL_20609
Error code 3020609:
When the value of the attribute 'qual:transitionEffect' of an <output> object is
set to the value 'production' the attribute 'qual:outputLevel' for that
particular <output> object must have a value set.
|
static int |
QUAL_20610
Error code 3020610:
The attribute 'qual:outputLevel' in <output> must not be negative.
|
static int |
QUAL_20701
Error code 3020701:
A <defaultTerm> object may have the optional 'metaid' and 'sboTerm' defined by
SBML Level 3 Core.
|
static int |
QUAL_20702
Error code 3020702:
A <defaultTerm> object may have the optional SBML Level 3 Core subobjects for
notes and annotations.
|
static int |
QUAL_20703
Error code 3020703:
A <defaultTerm> object must have the required attributes 'qual:resultLevel'.
|
static int |
QUAL_20704
Error code 3020704:
The attribute 'qual:resultLevel' in <defaultTerm> must be of the data type
'integer'.
|
static int |
QUAL_20705
Error code 3020705:
The attribute 'qual:resultLevel' in <defaultTerm> must not be negative.
|
static int |
QUAL_20801
Error code 3020801:
A <functionTerm> object may have the optional 'metaid' and 'sboTerm' defined by
SBML Level 3 Core.
|
static int |
QUAL_20802
Error code 3020802:
A <functionTerm> object may have the optional SBML Level 3 Core subobjects for
notes and annotations.
|
static int |
QUAL_20803
Error code 3020803:
A <functionTerm> object must have the required attributes 'qual:resultLevel'.
|
static int |
QUAL_20804
Error code 3020804:
A <functionTerm> object may contain exactly one MathML <math> element.
|
static int |
QUAL_20805
Error code 3020805:
The attribute 'qual:resultLevel' in <functionTerm> must be of the data type
'integer'.
|
static int |
QUAL_20806
Error code 3020806:
The attribute 'qual:resultLevel' in <functionTerm> must not be negative.
|
static final int CORE_00000
static final int CORE_00001
static final int CORE_00002
static final int CORE_00003
static final int CORE_00004
static final int CORE_00005
static final int CORE_00101
static final int CORE_00102
static final int CORE_00103
static final int CORE_01001
static final int CORE_01002
static final int CORE_01003
static final int CORE_01004
static final int CORE_01005
static final int CORE_01006
static final int CORE_01007
static final int CORE_01008
static final int CORE_01009
static final int CORE_01010
static final int CORE_01011
static final int CORE_01012
static final int CORE_01013
static final int CORE_01014
static final int CORE_01015
static final int CORE_01016
static final int CORE_01017
static final int CORE_01018
static final int CORE_01019
static final int CORE_01020
static final int CORE_01021
static final int CORE_01022
static final int CORE_01023
static final int CORE_01024
static final int CORE_01025
static final int CORE_01026
static final int CORE_01027
static final int CORE_01028
static final int CORE_01029
static final int CORE_01030
static final int CORE_01031
static final int CORE_01032
static final int CORE_01033
static final int CORE_01034
static final int CORE_01035
static final int CORE_09999
static final int CORE_10000
static final int CORE_10101
static final int CORE_10102
static final int CORE_10103
static final int CORE_10104
static final int CORE_10201
static final int CORE_10202
static final int CORE_10203
static final int CORE_10204
static final int CORE_10205
static final int CORE_10206
static final int CORE_10207
static final int CORE_10208
static final int CORE_10209
static final int CORE_10210
static final int CORE_10211
static final int CORE_10212
static final int CORE_10213
static final int CORE_10214
static final int CORE_10215
static final int CORE_10216
static final int CORE_10217
static final int CORE_10218
static final int CORE_10219
static final int CORE_10220
static final int CORE_10221
static final int CORE_10222
static final int CORE_10301
static final int CORE_10302
static final int CORE_10303
static final int CORE_10304
static final int CORE_10305
static final int CORE_10306
static final int CORE_10307
static final int CORE_10308
static final int CORE_10309
static final int CORE_10310
static final int CORE_10311
static final int CORE_10312
static final int CORE_10313
static final int CORE_10401
static final int CORE_10402
static final int CORE_10403
static final int CORE_10404
static final int CORE_10501
static final int CORE_10503
static final int CORE_10511
static final int CORE_10512
static final int CORE_10513
static final int CORE_10514
static final int CORE_10521
static final int CORE_10522
static final int CORE_10523
static final int CORE_10524
static final int CORE_10531
static final int CORE_10532
static final int CORE_10533
static final int CORE_10534
static final int CORE_10541
static final int CORE_10542
static final int CORE_10551
static final int CORE_10561
static final int CORE_10562
static final int CORE_10563
static final int CORE_10564
static final int CORE_10565
static final int CORE_10599
static final int CORE_10601
static final int CORE_10701
static final int CORE_10702
static final int CORE_10703
static final int CORE_10704
static final int CORE_10705
static final int CORE_10706
static final int CORE_10707
static final int CORE_10708
static final int CORE_10709
static final int CORE_10710
static final int CORE_10711
static final int CORE_10712
static final int CORE_10713
static final int CORE_10714
static final int CORE_10715
static final int CORE_10716
static final int CORE_10717
static final int CORE_10718
static final int CORE_10801
static final int CORE_10802
static final int CORE_10803
static final int CORE_10804
static final int CORE_10805
static final int CORE_20101
static final int CORE_20102
static final int CORE_20103
static final int CORE_20104
static final int CORE_20105
static final int CORE_20106
static final int CORE_20108
static final int CORE_20109
static final int CORE_20201
static final int CORE_20202
static final int CORE_20203
static final int CORE_20204
static final int CORE_20205
static final int CORE_20206
static final int CORE_20207
static final int CORE_20208
static final int CORE_20209
static final int CORE_20210
static final int CORE_20211
static final int CORE_20212
static final int CORE_20213
static final int CORE_20214
static final int CORE_20215
static final int CORE_20216
static final int CORE_20217
static final int CORE_20218
static final int CORE_20219
static final int CORE_20220
static final int CORE_20221
static final int CORE_20222
static final int CORE_20223
static final int CORE_20224
static final int CORE_20225
static final int CORE_20226
static final int CORE_20227
static final int CORE_20228
static final int CORE_20229
static final int CORE_20230
static final int CORE_20231
static final int CORE_20232
static final int CORE_20233
static final int CORE_20301
static final int CORE_20302
static final int CORE_20303
static final int CORE_20304
static final int CORE_20305
static final int CORE_20306
static final int CORE_20307
static final int CORE_20401
static final int CORE_20402
static final int CORE_20403
static final int CORE_20404
static final int CORE_20405
static final int CORE_20406
static final int CORE_20407
static final int CORE_20408
static final int CORE_20409
static final int CORE_20410
static final int CORE_20411
static final int CORE_20412
static final int CORE_20413
static final int CORE_20414
static final int CORE_20415
static final int CORE_20419
static final int CORE_20420
static final int CORE_20421
static final int CORE_20501
static final int CORE_20502
static final int CORE_20503
static final int CORE_20504
static final int CORE_20505
static final int CORE_20506
static final int CORE_20507
static final int CORE_20508
static final int CORE_20509
static final int CORE_20510
static final int CORE_20511
static final int CORE_20512
static final int CORE_20513
static final int CORE_20517
static final int CORE_20518
static final int CORE_20601
static final int CORE_20602
static final int CORE_20603
static final int CORE_20604
static final int CORE_20605
static final int CORE_20606
static final int CORE_20607
static final int CORE_20608
static final int CORE_20609
static final int CORE_20610
static final int CORE_20611
static final int CORE_20612
static final int CORE_20613
static final int CORE_20614
static final int CORE_20615
static final int CORE_20616
static final int CORE_20617
static final int CORE_20623
static final int CORE_20701
static final int CORE_20702
static final int CORE_20705
static final int CORE_20706
static final int CORE_20801
static final int CORE_20802
static final int CORE_20803
static final int CORE_20804
static final int CORE_20805
static final int CORE_20806
static final int CORE_20901
static final int CORE_20902
static final int CORE_20903
static final int CORE_20904
static final int CORE_20905
static final int CORE_20906
static final int CORE_20907
static final int CORE_20908
static final int CORE_20909
static final int CORE_20910
static final int CORE_20911
static final int CORE_21001
static final int CORE_21002
static final int CORE_21003
static final int CORE_21004
static final int CORE_21005
static final int CORE_21006
static final int CORE_21007
static final int CORE_21008
static final int CORE_21009
static final int CORE_21101
static final int CORE_21102
static final int CORE_21103
static final int CORE_21104
static final int CORE_21105
static final int CORE_21106
static final int CORE_21107
static final int CORE_21110
static final int CORE_21111
static final int CORE_21112
static final int CORE_21113
static final int CORE_21116
static final int CORE_21117
static final int CORE_21121
static final int CORE_21122
static final int CORE_21123
static final int CORE_21124
static final int CORE_21125
static final int CORE_21126
static final int CORE_21127
static final int CORE_21128
static final int CORE_21129
static final int CORE_21130
static final int CORE_21131
static final int CORE_21132
static final int CORE_21150
static final int CORE_21151
static final int CORE_21152
static final int CORE_21172
static final int CORE_21201
static final int CORE_21202
static final int CORE_21203
static final int CORE_21204
static final int CORE_21205
static final int CORE_21206
static final int CORE_21207
static final int CORE_21209
static final int CORE_21210
static final int CORE_21211
static final int CORE_21212
static final int CORE_21213
static final int CORE_21214
static final int CORE_21221
static final int CORE_21222
static final int CORE_21223
static final int CORE_21224
static final int CORE_21225
static final int CORE_21226
static final int CORE_21227
static final int CORE_21228
static final int CORE_21229
static final int CORE_21230
static final int CORE_21231
static final int CORE_21232
static final int CORE_29999
static final int CORE_80501
static final int CORE_80601
static final int CORE_80701
static final int CORE_80702
static final int CORE_81121
static final int CORE_90000
static final int CORE_90001
static final int CORE_91001
static final int CORE_91002
static final int CORE_91003
static final int CORE_91004
static final int CORE_91005
static final int CORE_91006
static final int CORE_91007
static final int CORE_91008
static final int CORE_91009
static final int CORE_91010
static final int CORE_91011
static final int CORE_91012
static final int CORE_91013
static final int CORE_91014
static final int CORE_91015
static final int CORE_91016
static final int CORE_91017
static final int CORE_91018
static final int CORE_91019
static final int CORE_91020
static final int CORE_92001
static final int CORE_92002
static final int CORE_92003
static final int CORE_92004
static final int CORE_92005
static final int CORE_92006
static final int CORE_92007
static final int CORE_92008
static final int CORE_92009
static final int CORE_92010
static final int CORE_92011
static final int CORE_92012
static final int CORE_92013
static final int CORE_93001
static final int CORE_93002
static final int CORE_93003
static final int CORE_93004
static final int CORE_93005
static final int CORE_93006
static final int CORE_93007
static final int CORE_93008
static final int CORE_93009
static final int CORE_94001
static final int CORE_94002
static final int CORE_94003
static final int CORE_94004
static final int CORE_94005
static final int CORE_94006
static final int CORE_94007
static final int CORE_94008
static final int CORE_94009
static final int CORE_94010
static final int CORE_95001
static final int CORE_95002
static final int CORE_95003
static final int CORE_95004
static final int CORE_95005
static final int CORE_95006
static final int CORE_95007
static final int CORE_96001
static final int CORE_96002
static final int CORE_96003
static final int CORE_96004
static final int CORE_96005
static final int CORE_96006
static final int CORE_96007
static final int CORE_96008
static final int CORE_96009
static final int CORE_96010
static final int CORE_96011
static final int CORE_99101
static final int CORE_99104
static final int CORE_99106
static final int CORE_99107
static final int CORE_99108
static final int CORE_99109
static final int CORE_99127
static final int CORE_99128
static final int CORE_99129
static final int CORE_99130
static final int CORE_99206
static final int CORE_99219
static final int CORE_99220
static final int CORE_99221
static final int CORE_99222
static final int CORE_99223
static final int CORE_99224
static final int CORE_99225
static final int CORE_99301
static final int CORE_99302
static final int CORE_99303
static final int CORE_99401
static final int CORE_99402
static final int CORE_99403
static final int CORE_99404
static final int CORE_99405
static final int CORE_99406
static final int CORE_99407
static final int CORE_99505
static final int CORE_99506
static final int CORE_99507
static final int CORE_99508
static final int CORE_99701
static final int CORE_99702
static final int CORE_99901
static final int CORE_99902
static final int CORE_99903
static final int CORE_99904
static final int CORE_99905
static final int CORE_99906
static final int CORE_99907
static final int CORE_99908
static final int CORE_99909
static final int CORE_99910
static final int CORE_99911
static final int CORE_99912
static final int CORE_99913
static final int CORE_99914
static final int CORE_99915
static final int CORE_99916
static final int CORE_99917
static final int CORE_99918
static final int CORE_99919
static final int CORE_99920
static final int CORE_99921
static final int CORE_99922
static final int CORE_99923
static final int CORE_99924
static final int CORE_99925
static final int CORE_99926
static final int CORE_99994
static final int CORE_99995
static final int CORE_99996
static final int CORE_99997
static final int CORE_99998
static final int CORE_99999
static final int COMP_10100
static final int COMP_10101
static final int COMP_10102
static final int COMP_10301
static final int COMP_10302
static final int COMP_10303
static final int COMP_10304
static final int COMP_10308
static final int COMP_10309
static final int COMP_10310
static final int COMP_10311
static final int COMP_10501
static final int COMP_20101
static final int COMP_20102
static final int COMP_20103
static final int COMP_20104
static final int COMP_20105
static final int COMP_20201
static final int COMP_20202
static final int COMP_20203
static final int COMP_20204
static final int COMP_20205
static final int COMP_20206
static final int COMP_20207
static final int COMP_20208
static final int COMP_20209
static final int COMP_20210
static final int COMP_20211
static final int COMP_20212
static final int COMP_20301
static final int COMP_20302
static final int COMP_20303
static final int COMP_20304
static final int COMP_20305
static final int COMP_20306
static final int COMP_20307
static final int COMP_20308
static final int COMP_20309
static final int COMP_20310
static final int COMP_20501
static final int COMP_20502
static final int COMP_20503
static final int COMP_20504
static final int COMP_20505
static final int COMP_20506
static final int COMP_20601
static final int COMP_20602
static final int COMP_20603
static final int COMP_20604
static final int COMP_20605
static final int COMP_20606
static final int COMP_20607
static final int COMP_20608
static final int COMP_20613
static final int COMP_20614
static final int COMP_20615
static final int COMP_20616
static final int COMP_20617
static final int COMP_20622
static final int COMP_20623
static final int COMP_20701
static final int COMP_20702
static final int COMP_20703
static final int COMP_20704
static final int COMP_20705
static final int COMP_20706
static final int COMP_20707
static final int COMP_20708
static final int COMP_20709
static final int COMP_20710
static final int COMP_20711
static final int COMP_20712
static final int COMP_20713
static final int COMP_20714
static final int COMP_20801
static final int COMP_20802
static final int COMP_20803
static final int COMP_20804
static final int COMP_20901
static final int COMP_20902
static final int COMP_20903
static final int COMP_21001
static final int COMP_21002
static final int COMP_21003
static final int COMP_21004
static final int COMP_21005
static final int COMP_21006
static final int COMP_21010
static final int COMP_21011
static final int COMP_21101
static final int COMP_21102
static final int COMP_21103
static final int COMP_21104
static final int COMP_21201
static final int COMP_21202
static final int COMP_21203
static final int COMP_21204
static final int COMP_90101
static final int COMP_90102
static final int COMP_90103
static final int COMP_90104
static final int COMP_90105
static final int COMP_90106
static final int COMP_90107
static final int COMP_90108
static final int COMP_90109
static final int COMP_90110
static final int COMP_90111
static final int COMP_90112
static final int COMP_90113
static final int COMP_90114
static final int COMP_90115
static final int COMP_90116
static final int FBC_10100
static final int FBC_10101
static final int FBC_10102
static final int FBC_10301
static final int FBC_10302
static final int FBC_20101
static final int FBC_20102
static final int FBC_20103
static final int FBC_20201
static final int FBC_20202
static final int FBC_20203
static final int FBC_20204
static final int FBC_20205
static final int FBC_20206
static final int FBC_20207
static final int FBC_20208
static final int FBC_20209
static final int FBC_20210
static final int FBC_20211
static final int FBC_20212
static final int FBC_20301
static final int FBC_20302
static final int FBC_20303
static final int FBC_20401
static final int FBC_20402
static final int FBC_20403
static final int FBC_20404
static final int FBC_20405
static final int FBC_20406
static final int FBC_20407
static final int FBC_20408
static final int FBC_20409
static final int FBC_20501
static final int FBC_20502
static final int FBC_20503
static final int FBC_20504
static final int FBC_20505
static final int FBC_20506
static final int FBC_20507
static final int FBC_20508
static final int FBC_20509
static final int FBC_20601
static final int FBC_20602
static final int FBC_20603
static final int FBC_20604
static final int FBC_20605
static final int FBC_20606
static final int FBC_20607
static final int FBC_20608
static final int FBC_20701
static final int FBC_20702
static final int FBC_20703
static final int FBC_20704
static final int FBC_20705
static final int FBC_20706
static final int FBC_20707
static final int FBC_20708
static final int FBC_20709
static final int FBC_20710
static final int FBC_20711
static final int FBC_20712
static final int FBC_20713
static final int FBC_20714
static final int FBC_20715
static final int FBC_20716
static final int FBC_20801
static final int FBC_20802
static final int FBC_20803
static final int FBC_20804
static final int FBC_20805
static final int FBC_20806
static final int FBC_20901
static final int FBC_20902
static final int FBC_20903
static final int FBC_20904
static final int FBC_20908
static final int FBC_21001
static final int FBC_21002
static final int FBC_21003
static final int FBC_21101
static final int FBC_21102
static final int FBC_21103
static final int FBC_21201
static final int FBC_21202
static final int FBC_21203
static final int FBC_21204
static final int FBC_21205
static final int FBC_21206
static final int FBC_21207
static final int QUAL_10100
static final int QUAL_10101
static final int QUAL_10102
static final int QUAL_10201
static final int QUAL_10202
static final int QUAL_10301
static final int QUAL_20101
static final int QUAL_20102
static final int QUAL_20103
static final int QUAL_20201
static final int QUAL_20202
static final int QUAL_20203
static final int QUAL_20204
static final int QUAL_20205
static final int QUAL_20206
static final int QUAL_20301
static final int QUAL_20302
static final int QUAL_20303
static final int QUAL_20304
static final int QUAL_20305
static final int QUAL_20306
static final int QUAL_20307
static final int QUAL_20308
static final int QUAL_20309
static final int QUAL_20310
static final int QUAL_20311
static final int QUAL_20312
static final int QUAL_20313
static final int QUAL_20401
static final int QUAL_20402
static final int QUAL_20403
static final int QUAL_20404
static final int QUAL_20405
static final int QUAL_20406
static final int QUAL_20407
static final int QUAL_20408
static final int QUAL_20409
static final int QUAL_20410
static final int QUAL_20411
static final int QUAL_20412
static final int QUAL_20413
static final int QUAL_20414
static final int QUAL_20501
static final int QUAL_20502
static final int QUAL_20503
static final int QUAL_20504
static final int QUAL_20505
static final int QUAL_20506
static final int QUAL_20507
static final int QUAL_20508
static final int QUAL_20509
static final int QUAL_20510
static final int QUAL_20601
static final int QUAL_20602
static final int QUAL_20603
static final int QUAL_20604
static final int QUAL_20605
static final int QUAL_20606
static final int QUAL_20607
static final int QUAL_20608
static final int QUAL_20609
static final int QUAL_20610
static final int QUAL_20701
static final int QUAL_20702
static final int QUAL_20703
static final int QUAL_20704
static final int QUAL_20705
static final int QUAL_20801
static final int QUAL_20802
static final int QUAL_20803
static final int QUAL_20804
static final int QUAL_20805
static final int QUAL_20806
static final int GROUPS_10100
static final int GROUPS_10101
static final int GROUPS_10102
static final int GROUPS_10301
static final int GROUPS_10302
static final int GROUPS_20101
static final int GROUPS_20102
static final int GROUPS_20103
static final int GROUPS_20201
static final int GROUPS_20202
static final int GROUPS_20203
static final int GROUPS_20204
static final int GROUPS_20301
static final int GROUPS_20302
static final int GROUPS_20303
static final int GROUPS_20304
static final int GROUPS_20305
static final int GROUPS_20306
static final int GROUPS_20307
static final int GROUPS_20308
static final int GROUPS_20309
static final int GROUPS_20310
static final int GROUPS_20311
static final int GROUPS_20312
static final int GROUPS_20313
static final int GROUPS_20401
static final int GROUPS_20402
static final int GROUPS_20403
static final int GROUPS_20404
static final int GROUPS_20405
static final int GROUPS_20406
static final int GROUPS_20407
static final int GROUPS_20408
static final int LAYOUT_10100
static final int LAYOUT_10101
static final int LAYOUT_10102
static final int LAYOUT_10301
static final int LAYOUT_10302
static final int LAYOUT_10401
static final int LAYOUT_10402
static final int LAYOUT_20101
static final int LAYOUT_20102
static final int LAYOUT_20103
static final int LAYOUT_20201
static final int LAYOUT_20202
static final int LAYOUT_20203
static final int LAYOUT_20204
static final int LAYOUT_20301
static final int LAYOUT_20302
static final int LAYOUT_20303
static final int LAYOUT_20304
static final int LAYOUT_20305
static final int LAYOUT_20306
static final int LAYOUT_20307
static final int LAYOUT_20308
static final int LAYOUT_20309
static final int LAYOUT_20310
static final int LAYOUT_20311
static final int LAYOUT_20312
static final int LAYOUT_20313
static final int LAYOUT_20314
static final int LAYOUT_20315
static final int LAYOUT_20316
static final int LAYOUT_20317
static final int LAYOUT_20401
static final int LAYOUT_20402
static final int LAYOUT_20403
static final int LAYOUT_20404
static final int LAYOUT_20405
static final int LAYOUT_20406
static final int LAYOUT_20407
static final int LAYOUT_20501
static final int LAYOUT_20502
static final int LAYOUT_20503
static final int LAYOUT_20504
static final int LAYOUT_20505
static final int LAYOUT_20506
static final int LAYOUT_20507
static final int LAYOUT_20508
static final int LAYOUT_20509
static final int LAYOUT_20510
static final int LAYOUT_20601
static final int LAYOUT_20602
static final int LAYOUT_20603
static final int LAYOUT_20604
static final int LAYOUT_20605
static final int LAYOUT_20606
static final int LAYOUT_20607
static final int LAYOUT_20608
static final int LAYOUT_20609
static final int LAYOUT_20701
static final int LAYOUT_20702
static final int LAYOUT_20703
static final int LAYOUT_20704
static final int LAYOUT_20705
static final int LAYOUT_20706
static final int LAYOUT_20707
static final int LAYOUT_20708
static final int LAYOUT_20709
static final int LAYOUT_20710
static final int LAYOUT_20711
static final int LAYOUT_20712
static final int LAYOUT_20801
static final int LAYOUT_20802
static final int LAYOUT_20803
static final int LAYOUT_20804
static final int LAYOUT_20805
static final int LAYOUT_20806
static final int LAYOUT_20807
static final int LAYOUT_20808
static final int LAYOUT_20809
static final int LAYOUT_20810
static final int LAYOUT_20811
static final int LAYOUT_20812
static final int LAYOUT_20813
static final int LAYOUT_20901
static final int LAYOUT_20902
static final int LAYOUT_20903
static final int LAYOUT_20904
static final int LAYOUT_20905
static final int LAYOUT_20906
static final int LAYOUT_20907
static final int LAYOUT_20908
static final int LAYOUT_20909
static final int LAYOUT_20910
static final int LAYOUT_20911
static final int LAYOUT_20912
static final int LAYOUT_21001
static final int LAYOUT_21002
static final int LAYOUT_21003
static final int LAYOUT_21004
static final int LAYOUT_21005
static final int LAYOUT_21006
static final int LAYOUT_21007
static final int LAYOUT_21008
static final int LAYOUT_21009
static final int LAYOUT_21010
static final int LAYOUT_21011
static final int LAYOUT_21012
static final int LAYOUT_21101
static final int LAYOUT_21102
static final int LAYOUT_21103
static final int LAYOUT_21104
static final int LAYOUT_21105
static final int LAYOUT_21106
static final int LAYOUT_21107
static final int LAYOUT_21108
static final int LAYOUT_21109
static final int LAYOUT_21110
static final int LAYOUT_21111