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JDiff

JDiff Statistics

The percent change statistic reported for all elements in each API is defined recursively as follows:
Percentage difference = 100 * (added + removed + 2*changed)
                        -----------------------------------
                        sum of public elements in BOTH APIs
Where added is the number of packages added, removed is the number of packages removed, and changed is the number of packages changed. This definition is applied recursively for the classes and their program elements, so the value for a changed package will be less than 1, unless every class in that package has changed. The definition ensures that if all packages are removed and all new packages are added, the change will be 100%. Values are rounded here, so a value of 0% indicates a percentage difference of less than 0.5%.

The overall difference between the two APIs is approximately 26%.

Sections

Packages sorted by percentage difference
Classes and Interfaces sorted by percentage difference
Differences by number and type

Packages Sorted By Percentage Difference

Percentage
Difference
Package
24 org.sbml.jsbml.ext.spatial
19 org.sbml.jsbml.ext.layout
16 org.sbml.jsbml.ext.qual
12 org.sbml.jsbml.ext.render
11 org.sbml.jsbml.ext.groups
8 org.sbml.jsbml.util
6 org.sbml.jsbml.ext.fbc
6 org.sbml.jsbml.ext
5 org.sbml.jsbml.xml.test
4 org.sbml.jsbml.test.sbml
4 org.sbml.jsbml.util.compilers
4 org.sbml.jsbml.xml.parsers
3 org.sbml.jsbml.text.parser
3 org.sbml.jsbml.ext.comp
1 org.sbml.jsbml
<1 org.sbml.jsbml.xml

Percentage
Difference
Frequency Percentage Frequency
0 0.0625 |
1 0.0625 |
3 0.125 |
4 0.1875 |
5 0.0625 |
6 0.125 |
8 0.0625 |
11 0.0625 |
12 0.0625 |
16 0.0625 |
19 0.0625 |
24 0.0625 |


Classes and Interfaces Sorted By Percentage Difference

Percentage
Difference
Class or Interface
100 org.sbml.jsbml.ext.qual.QualitativeModel
75 org.sbml.jsbml.ext.spatial.DiffusionCoefficient
62 org.sbml.jsbml.ext.spatial.AdvectionCoefficient
50 org.sbml.jsbml.PropertyUndefinedError
42 org.sbml.jsbml.ext.render.LocalStyle
40 org.sbml.jsbml.ext.spatial.GeometryDefinition
36 org.sbml.jsbml.ext.spatial.CoordinateComponent
36 org.sbml.jsbml.ext.spatial.SampledField
33 org.sbml.jsbml.util.ListOfWithName
33 org.sbml.jsbml.xml.parsers.RenderParser
27 org.sbml.jsbml.ext.render.Transformation
25 org.sbml.jsbml.ext.render.GraphicalPrimitive2D.FillRule
21 org.sbml.jsbml.ext.spatial.DomainType
20 org.sbml.jsbml.util.ValuePair
20 org.sbml.jsbml.ext.render.Style
18 org.sbml.jsbml.ext.render.GraphicalPrimitive1D
16 org.sbml.jsbml.test.sbml.TestCVTerms
16 org.sbml.jsbml.xml.parsers.ParserManager
15 org.sbml.jsbml.ext.spatial.ParametricObject
13 org.sbml.jsbml.ext.layout.GeneralGlyph
13 org.sbml.jsbml.ext.AbstractSBasePlugin
13 org.sbml.jsbml.ext.render.ColorDefinition
13 org.sbml.jsbml.ext.comp.CompModelPlugin
13 org.sbml.jsbml.ext.spatial.Geometry
13 org.sbml.jsbml.ext.spatial.SampledFieldGeometry
12 org.sbml.jsbml.ext.spatial.CSGSetOperator
12 org.sbml.jsbml.text.parser.IFormulaParser
12 org.sbml.jsbml.ext.groups.Group
12 org.sbml.jsbml.ext.layout.Layout
11 org.sbml.jsbml.ext.spatial.ParameterType
10 org.sbml.jsbml.text.parser.FormulaParserLL3Constants
9 org.sbml.jsbml.ext.spatial.SpatialModelPlugin
9 org.sbml.jsbml.ext.comp.CompSBMLDocumentPlugin
8 org.sbml.jsbml.ext.layout.BoundingBox
8 org.sbml.jsbml.ext.render.GraphicalPrimitive2D
8 org.sbml.jsbml.ext.layout.Point
7 org.sbml.jsbml.ext.comp.ModelDefinition
7 org.sbml.jsbml.ext.spatial.BoundaryCondition
7 org.sbml.jsbml.ext.groups.GroupsModelPlugin
6 org.sbml.jsbml.ext.spatial.CSGPrimitive
6 org.sbml.jsbml.text.parser.FormulaParserConstants
6 org.sbml.jsbml.ext.layout.CurveSegment
6 org.sbml.jsbml.text.parser.ParseException
6 org.sbml.jsbml.ext.spatial.SpatialConstants
6 org.sbml.jsbml.SBO.Triple
6 org.sbml.jsbml.ext.fbc.FBCModelPlugin
6 org.sbml.jsbml.CVTerm
5 org.sbml.jsbml.ext.comp.Port
5 org.sbml.jsbml.ext.layout.CubicBezier
5 org.sbml.jsbml.ext.render.GlobalRenderInformation
5 org.sbml.jsbml.ext.render.LineEnding
5 org.sbml.jsbml.ext.render.LocalRenderInformation
5 org.sbml.jsbml.ext.render.Transformation2D
5 org.sbml.jsbml.ext.groups.ListOfMemberConstraint
5 org.sbml.jsbml.ext.groups.Member
5 org.sbml.jsbml.ext.groups.MemberConstraint
5 org.sbml.jsbml.ext.render.GradientStop
4 org.sbml.jsbml.xml.XMLNode
4 org.sbml.jsbml.ext.fbc.FluxObjective
4 org.sbml.jsbml.ext.comp.CompSBasePlugin
4 org.sbml.jsbml.AbstractTreeNode
4 org.sbml.jsbml.util.TreeNodeChangeEvent
4 org.sbml.jsbml.util.compilers.FormulaCompiler
4 org.sbml.jsbml.AbstractSBase
4 org.sbml.jsbml.ext.fbc.ListOfObjectives
4 org.sbml.jsbml.SBase
4 org.sbml.jsbml.ext.comp.ReplacedBy
4 org.sbml.jsbml.ext.fbc.FluxBound
4 org.sbml.jsbml.ext.spatial.AnalyticVolume
3 org.sbml.jsbml.SBO.Term
3 org.sbml.jsbml.util.TreeNodeWithChangeSupport
3 org.sbml.jsbml.ext.render.GradientBase
3 org.sbml.jsbml.ext.layout.LayoutModelPlugin
3 org.sbml.jsbml.ext.layout.ReactionGlyph
3 org.sbml.jsbml.ext.fbc.Objective
2 org.sbml.jsbml.Compartment
2 org.sbml.jsbml.ext.render.LinearGradient
2 org.sbml.jsbml.ext.spatial.AnalyticGeometry
2 org.sbml.jsbml.ext.spatial.SpatialSpeciesPlugin
2 org.sbml.jsbml.LocalParameter
2 org.sbml.jsbml.text.parser.FormulaParser
2 org.sbml.jsbml.ext.layout.LineSegment
2 org.sbml.jsbml.text.parser.FormulaParserLL3
2 org.sbml.jsbml.SBO
2 org.sbml.jsbml.KineticLaw
2 org.sbml.jsbml.Annotation
1 org.sbml.jsbml.ext.layout.TextGlyph
1 org.sbml.jsbml.ext.render.Ellipse
1 org.sbml.jsbml.ext.render.AbstractRenderPlugin
1 org.sbml.jsbml.ext.render.Image
1 org.sbml.jsbml.SBMLDocument
1 org.sbml.jsbml.ext.render.RenderInformationBase
1 org.sbml.jsbml.Model
1 org.sbml.jsbml.ASTNode
1 org.sbml.jsbml.Event
1 org.sbml.jsbml.SpeciesReference
<1 org.sbml.jsbml.ext.layout.LayoutConstants
<1 org.sbml.jsbml.UnitDefinition
<1 org.sbml.jsbml.Species
<1 org.sbml.jsbml.util.compilers.ASTNodeCompiler
<1 org.sbml.jsbml.util.compilers.FindUnitsCompiler
<1 org.sbml.jsbml.util.compilers.UnitsCompiler
<1 org.sbml.jsbml.util.compilers.MathMLCompiler
<1 org.sbml.jsbml.Unit
<1 org.sbml.jsbml.util.compilers.LaTeXCompiler

Percentage
Difference
Frequency Percentage Frequency
0 0.08571428571428572 |
1 0.09523809523809523 |
2 0.10476190476190476 |
3 0.05714285714285714 |
4 0.11428571428571428 |
5 0.09523809523809523 |
6 0.0761904761904762 |
7 0.02857142857142857 |
8 0.02857142857142857 |
9 0.01904761904761905 |
10 0.009523809523809525 |
11 0.009523809523809525 |
12 0.0380952380952381 |
13 0.05714285714285714 |
15 0.009523809523809525 |
16 0.01904761904761905 |
18 0.009523809523809525 |
20 0.01904761904761905 |
21 0.009523809523809525 |
25 0.009523809523809525 |
27 0.009523809523809525 |
33 0.01904761904761905 |
36 0.01904761904761905 |
40 0.009523809523809525 |
42 0.009523809523809525 |
50 0.009523809523809525 |
62 0.009523809523809525 |
75 0.009523809523809525 |
100 0.009523809523809525 |


Differences By Number and Type

The numbers of program elements (packages, classes. constructors, methods and fields) which are recorded as removed, added or changed includes only the highest-level program elements. That is, if a class with two methods was added, the number of methods added does not include those two methods, but the number of classes added does include that class.
Number of Differences
  Removals Additions Changes Total
Packages 1 13 16 30
Classes and Interfaces 19 25 105 149
Constructors 8 21 1 30
Methods 58 243 144 445
Fields 5 29 8 42
Total 91 331 274 696