All Methods

Removals

Additions

Changes

Bold is New, strike is deleted

A  C E F G H I P R S T U W TOP
addQualitativeSpecies (QualitativeSpecies)
addSpecies (QualitativeSpecies)
addTransition (Transition)

C  A E F G H I P R S T U W TOP
clone
  type  () in org.sbml.jsbml.ext.comp.ModelDefinition
  type  () in org.sbml.jsbml.ext.qual.QualitativeModel
  type  () in org.sbml.jsbml.ext.render.AbstractRenderPlugin
  type  () in org.sbml.jsbml.util.ValuePair
containsQualitativeSpecies (QualitativeSpecies)
containsUndeclaredUnits
  type  () in org.sbml.jsbml.Compartment
  type  () in org.sbml.jsbml.Species
createPosition
  type  () in org.sbml.jsbml.ext.layout.BoundingBox
  type  (double, double, double) in org.sbml.jsbml.ext.layout.BoundingBox

E  A C F G H I P R S T U W TOP
equals
  type  (Object) in org.sbml.jsbml.ext.fbc.FluxBound
  type  (Object) in org.sbml.jsbml.ext.fbc.FluxObjective
  type  (Object) in org.sbml.jsbml.ext.fbc.Objective
  type  (Object) in org.sbml.jsbml.ext.groups.Group
  type  (Object) in org.sbml.jsbml.ext.groups.Member
  type  (Object) in org.sbml.jsbml.ext.groups.MemberConstraint
  type  (Object) in org.sbml.jsbml.ext.render.ColorDefinition
  type  (Object) in org.sbml.jsbml.ext.render.Ellipse
  type  (Object) in org.sbml.jsbml.ext.render.GlobalRenderInformation
  type  (Object) in org.sbml.jsbml.ext.render.GradientBase
  type  (Object) in org.sbml.jsbml.ext.render.GradientStop
  type  (Object) in org.sbml.jsbml.ext.render.GraphicalPrimitive1D
  type  (Object) in org.sbml.jsbml.ext.render.GraphicalPrimitive2D
  type  (Object) in org.sbml.jsbml.ext.render.Image
  type  (Object) in org.sbml.jsbml.ext.render.LinearGradient
  type  (Object) in org.sbml.jsbml.ext.render.LocalRenderInformation
  type  (Object) in org.sbml.jsbml.ext.render.LocalStyle
  type  (Object) in org.sbml.jsbml.ext.render.RenderInformationBase
  type  (Object) in org.sbml.jsbml.ext.render.Style
  type  (Object) in org.sbml.jsbml.ext.render.Transformation
  type  (Object) in org.sbml.jsbml.ext.spatial.AdvectionCoefficient
  type  (Object) in org.sbml.jsbml.ext.spatial.DiffusionCoefficient

F  A C E G H I P R S T U W TOP
fireNodeAddedEvent ()
fireNodeRemovedEvent ()
firePropertyChange
  type  (String, Object, Object) in org.sbml.jsbml.AbstractSBase
  type  (String, Object, Object) in org.sbml.jsbml.ext.AbstractSBasePlugin

G  A C E F H I P R S T U W TOP
getAllowsChildren
  type  () in org.sbml.jsbml.ext.qual.QualitativeModel
  type  () in org.sbml.jsbml.ext.render.ColorDefinition
  type  () in org.sbml.jsbml.ext.render.GraphicalPrimitive1D
  type  () in org.sbml.jsbml.ext.render.Transformation
getChildAt
  type  (int) in org.sbml.jsbml.ext.qual.QualitativeModel
  type  (int) in org.sbml.jsbml.ext.render.ColorDefinition
  type  (int) in org.sbml.jsbml.ext.render.GraphicalPrimitive1D
  type  (int) in org.sbml.jsbml.ext.render.Style
  type  (int) in org.sbml.jsbml.ext.render.Transformation
getChildCount
  type  () in org.sbml.jsbml.ext.qual.QualitativeModel
  type  () in org.sbml.jsbml.ext.render.ColorDefinition
  type  () in org.sbml.jsbml.ext.render.GraphicalPrimitive1D
  type  () in org.sbml.jsbml.ext.render.Transformation
getCoordinateSystem ()
getDataType ()
getElementName ()
getElementNamespace ()
getFunctionType ()
getGroup
  type  () in org.sbml.jsbml.ext.render.LineEnding
  type  () in org.sbml.jsbml.ext.render.Style
getListOfQualitativeSpecies ()
getListOfTransitions ()
getModel ()
getNumChildren ()
getOperationType ()
getPackageName ()
getParent ()
getParentSBMLObject ()
getPolygonType ()
getPrefix ()
getPrimitiveType ()
getReadingParsers ()
getSampledField ()
getStrokeWidth ()
getTerm ()
getTriple ()
getType ()
getUnits ()
getUnitsInstance ()
getURI ()
getWritingParsers ()

H  A C E F G I P R S T U W TOP
hashCode
  type  () in org.sbml.jsbml.ext.fbc.FluxBound
  type  () in org.sbml.jsbml.ext.fbc.FluxObjective
  type  () in org.sbml.jsbml.ext.fbc.Objective
  type  () in org.sbml.jsbml.ext.groups.Group
  type  () in org.sbml.jsbml.ext.groups.Member
  type  () in org.sbml.jsbml.ext.groups.MemberConstraint
  type  () in org.sbml.jsbml.ext.layout.LayoutModelPlugin
  type  () in org.sbml.jsbml.ext.render.ColorDefinition
  type  () in org.sbml.jsbml.ext.render.Ellipse
  type  () in org.sbml.jsbml.ext.render.GlobalRenderInformation
  type  () in org.sbml.jsbml.ext.render.GradientBase
  type  () in org.sbml.jsbml.ext.render.GradientStop
  type  () in org.sbml.jsbml.ext.render.GraphicalPrimitive1D
  type  () in org.sbml.jsbml.ext.render.GraphicalPrimitive2D
  type  () in org.sbml.jsbml.ext.render.Image
  type  () in org.sbml.jsbml.ext.render.LinearGradient
  type  () in org.sbml.jsbml.ext.render.LocalRenderInformation
  type  () in org.sbml.jsbml.ext.render.LocalStyle
  type  () in org.sbml.jsbml.ext.render.RenderInformationBase
  type  () in org.sbml.jsbml.ext.render.Style
  type  () in org.sbml.jsbml.ext.render.Transformation
  type  () in org.sbml.jsbml.ext.spatial.AdvectionCoefficient
  type  () in org.sbml.jsbml.ext.spatial.DiffusionCoefficient
  type  () in org.sbml.jsbml.ext.spatial.GeometryDefinition
  type  () in org.sbml.jsbml.ext.spatial.SampledFieldGeometry

I  A C E F G H P R S T U W TOP
isSetListOfQualitativeSpecies ()
isSetListOfTransitions ()

P  A C E F G H I R S T U W TOP
parse ()
parseFormula (String, IFormulaParser)

R  A C E F G H I P S T U W TOP
readAttribute
  type  (String, String, String) in org.sbml.jsbml.ext.qual.QualitativeModel
  type  (String, String, String) in org.sbml.jsbml.ext.spatial.AdvectionCoefficient
  type  (String, String, String) in org.sbml.jsbml.ext.spatial.DiffusionCoefficient
  type  (String, String, String) in org.sbml.jsbml.ext.spatial.GeometryDefinition
  type  (String, String, String) in org.sbml.jsbml.ext.spatial.SampledFieldGeometry
removeFromParent
  type  () in org.sbml.jsbml.CVTerm
  type  () in org.sbml.jsbml.ext.AbstractSBasePlugin
  type  () in org.sbml.jsbml.ext.comp.ReplacedBy
removeQualitativeSpecies (QualitativeSpecies)
removeResource (int)
removeTransition (Transition)

S  A C E F G H I P R T U W TOP
setCoordinateSystem (GeometryKind)
setDataType (DataKind)
setFunctionType (FunctionKind)
setGroup
  type  (RenderGroup) in org.sbml.jsbml.ext.render.LineEnding
  type  (RenderGroup) in org.sbml.jsbml.ext.render.Style
setId (String)
setListOfQualitativeSpecies (ListOf<QualitativeSpecies>)
setListOfTransitions (ListOf<Transition>)
setOperationType (SetOperation)
setParent (TreeNode)
setSampledField (String)
setStrokeWidth (Double)
setType (BoundaryKind)

T  A C E F G H I P R S U W TOP
toString
  type  () in org.sbml.jsbml.SpeciesReference
  type  () in org.sbml.jsbml.ext.layout.LineSegment
  type  () in org.sbml.jsbml.ext.render.LocalStyle

U  A C E F G H I P R S T W TOP
unregister
  type  (SBase) in org.sbml.jsbml.KineticLaw
  type  (SBase) in org.sbml.jsbml.Model
unsetListOfQualitativeSpecies ()
unsetListOfTransitions ()

W  A C E F G H I P R S T U TOP
writeXMLAttributes
  type  () in org.sbml.jsbml.ext.qual.QualitativeModel
  type  () in org.sbml.jsbml.ext.spatial.AdvectionCoefficient
  type  () in org.sbml.jsbml.ext.spatial.DiffusionCoefficient
  type  () in org.sbml.jsbml.ext.spatial.GeometryDefinition
  type  () in org.sbml.jsbml.ext.spatial.SampledFieldGeometry