org.sbml.jsbml.ext.layout
public class SpeciesReferenceGlyph extends AbstractReferenceGlyph
Modifier and Type | Field and Description |
---|---|
private Curve |
curve |
private SpeciesReferenceRole |
role |
private static long |
serialVersionUID
Generated serial version identifier.
|
private java.lang.String |
speciesGlyph |
ignoredExtensions, ignoredXMLElements
listOfListeners, parent, UNKNOWN_ATTRIBUTES, UNKNOWN_ELEMENTS
Constructor and Description |
---|
SpeciesReferenceGlyph() |
SpeciesReferenceGlyph(int level,
int version) |
SpeciesReferenceGlyph(SpeciesReferenceGlyph speciesReferenceGlyph) |
SpeciesReferenceGlyph(java.lang.String id) |
SpeciesReferenceGlyph(java.lang.String id,
int level,
int version) |
Modifier and Type | Method and Description |
---|---|
SpeciesReferenceGlyph |
clone()
Creates a deep copy of this object, i.e., a new
SBase with the same properties
like this one. |
Curve |
createCurve() |
boolean |
equals(java.lang.Object object)
|
javax.swing.tree.TreeNode |
getChildAt(int index) |
int |
getChildCount() |
Curve |
getCurve() |
java.lang.String |
getSpeciesGlyph() |
SpeciesGlyph |
getSpeciesGlyphInstance() |
java.lang.String |
getSpeciesReference() |
NamedSBase |
getSpeciesReferenceInstance()
Note that the return type of this method is
NamedSBase because it
could be possible to link some element from other packages to this glyph. |
SpeciesReferenceRole |
getSpeciesReferenceRole() |
int |
hashCode() |
boolean |
isSetCurve() |
boolean |
isSetSpeciesGlyph() |
boolean |
isSetSpeciesReference() |
boolean |
isSetSpeciesReferenceRole() |
boolean |
readAttribute(java.lang.String attributeName,
java.lang.String prefix,
java.lang.String value)
If the attribute is an id or name attribute, it will set the id or name
of this object with the value of the XML attribute ('value').
|
void |
setCurve(Curve curve) |
void |
setRole(SpeciesReferenceRole valueOf) |
void |
setSpeciesGlyph(java.lang.String speciesGlyph) |
void |
setSpeciesReference(SimpleSpeciesReference speciesReference) |
void |
setSpeciesReference(java.lang.String speciesReference) |
boolean |
unsetCurve() |
void |
unsetSpeciesReference() |
java.util.Map<java.lang.String,java.lang.String> |
writeXMLAttributes() |
getNamedSBaseInstance, getReference, getReferenceInstance, isSetReference, setNamedSBase, setReference, setReference, toString, unsetReference
createBoundingBox, createBoundingBox, createBoundingBox, createBoundingBox, getAllowsChildren, getBoundingBox, getMetaidRef, isIdMandatory, isSetBoundingBox, isSetMetaidRef, setBoundingBox, setMetaidRef, unsetBoundingBox, unsetMetaidRef
getId, getName, isSetId, isSetName, isValidId, setId, setName, unsetId, unsetName
addCVTerm, addDeclaredNamespace, addExtension, appendNotes, appendNotes, checkLevelAndVersionCompatibility, createHistory, createPlugin, disablePackage, enablePackage, enablePackage, filterCVTerms, filterCVTerms, filterCVTerms, fireNodeRemovedEvent, getAnnotation, getAnnotationString, getCVTerm, getCVTermCount, getCVTerms, getDeclaredNamespaces, getElementName, getExtension, getExtensionPackages, getHistory, getLevel, getLevelAndVersion, getMetaId, getModel, getNamespace, getNotes, getNotesString, getNumCVTerms, getNumPlugins, getParent, getParentSBMLObject, getPlugin, getSBMLDocument, getSBOTerm, getSBOTermID, getVersion, hasValidAnnotation, hasValidLevelVersionNamespaceCombination, isExtendedByOtherPackages, isPackageEnabled, isPackageURIEnabled, isPkgEnabled, isPkgURIEnabled, isSetAnnotation, isSetHistory, isSetLevel, isSetLevelAndVersion, isSetMetaId, isSetNotes, isSetParentSBMLObject, isSetPlugin, isSetSBOTerm, isSetVersion, isValidLevelAndVersionCombination, isValidMetaId, notifyChildChange, registerChild, setAnnotation, setHistory, setLevel, setMetaId, setNamespace, setNotes, setNotes, setParentSBML, setParentSBMLObject, setSBOTerm, setSBOTerm, setThisAsParentSBMLObject, setVersion, unregister, unsetAnnotation, unsetCVTerms, unsetExtension, unsetHistory, unsetMetaId, unsetNamespace, unsetNotes, unsetPlugin, unsetSBOTerm
addAllChangeListeners, addTreeNodeChangeListener, addTreeNodeChangeListener, children, clearUserObjects, containsUserObjectKey, filter, filter, filter, fireNodeAddedEvent, firePropertyChange, getIndex, getListOfTreeNodeChangeListeners, getNumChildren, getRoot, getTreeNodeChangeListenerCount, getUserObject, indexOf, isLeaf, isRoot, isSetParent, isSetUserObjects, putUserObject, removeAllTreeNodeChangeListeners, removeFromParent, removeTreeNodeChangeListener, removeTreeNodeChangeListener, removeUserObject, setParent, userObjectKeySet
finalize, getClass, notify, notifyAll, wait, wait, wait
getId, getName, isSetId, isSetName, setId, setName, unsetId, unsetName
addCVTerm, addDeclaredNamespace, addExtension, appendNotes, appendNotes, createPlugin, disablePackage, enablePackage, enablePackage, filterCVTerms, filterCVTerms, filterCVTerms, getAnnotation, getAnnotationString, getCVTerm, getCVTermCount, getCVTerms, getDeclaredNamespaces, getElementName, getExtension, getExtensionPackages, getHistory, getLevel, getLevelAndVersion, getMetaId, getModel, getNamespace, getNotes, getNotesString, getNumCVTerms, getNumPlugins, getParentSBMLObject, getPlugin, getSBMLDocument, getSBOTerm, getSBOTermID, getVersion, hasValidAnnotation, hasValidLevelVersionNamespaceCombination, isExtendedByOtherPackages, isPackageEnabled, isPackageURIEnabled, isPkgEnabled, isPkgURIEnabled, isSetAnnotation, isSetHistory, isSetLevel, isSetLevelAndVersion, isSetMetaId, isSetNotes, isSetParentSBMLObject, isSetPlugin, isSetSBOTerm, isSetVersion, registerChild, removeTreeNodeChangeListener, setAnnotation, setHistory, setLevel, setMetaId, setNotes, setNotes, setSBOTerm, setSBOTerm, setThisAsParentSBMLObject, setVersion, unregister, unsetAnnotation, unsetCVTerms, unsetExtension, unsetHistory, unsetMetaId, unsetNotes, unsetPlugin, unsetSBOTerm
addAllChangeListeners, addTreeNodeChangeListener, addTreeNodeChangeListener, clearUserObjects, containsUserObjectKey, filter, filter, filter, fireNodeAddedEvent, fireNodeRemovedEvent, firePropertyChange, getListOfTreeNodeChangeListeners, getRoot, getTreeNodeChangeListenerCount, getUserObject, isRoot, isSetParent, isSetUserObjects, putUserObject, removeAllTreeNodeChangeListeners, removeFromParent, removeTreeNodeChangeListener, removeUserObject, userObjectKeySet
private static final long serialVersionUID
private Curve curve
private SpeciesReferenceRole role
private java.lang.String speciesGlyph
public SpeciesReferenceGlyph()
public SpeciesReferenceGlyph(int level, int version)
level
- version
- public SpeciesReferenceGlyph(SpeciesReferenceGlyph speciesReferenceGlyph)
speciesReferenceGlyph
- public SpeciesReferenceGlyph(java.lang.String id)
id
- public SpeciesReferenceGlyph(java.lang.String id, int level, int version)
id
- level
- version
- public SpeciesReferenceGlyph clone()
SBase
SBase
with the same properties
like this one.clone
in interface SBase
clone
in class AbstractReferenceGlyph
public Curve createCurve()
public boolean equals(java.lang.Object object)
SBase
true
if and only if the given SBase
has exactly the same
properties like this SBase
instance.equals
in interface SBase
equals
in class AbstractReferenceGlyph
true
if and only if the given Object
is an instance of
SBase
that has exactly the same properties like this
SBase instance.public javax.swing.tree.TreeNode getChildAt(int index)
getChildAt
in interface javax.swing.tree.TreeNode
getChildAt
in class GraphicalObject
public int getChildCount()
getChildCount
in interface javax.swing.tree.TreeNode
getChildCount
in class GraphicalObject
public Curve getCurve()
public java.lang.String getSpeciesGlyph()
public SpeciesGlyph getSpeciesGlyphInstance()
public java.lang.String getSpeciesReference()
public NamedSBase getSpeciesReferenceInstance()
NamedSBase
because it
could be possible to link some element from other packages to this glyph.public SpeciesReferenceRole getSpeciesReferenceRole()
public int hashCode()
hashCode
in interface SBase
hashCode
in class AbstractReferenceGlyph
Object.hashCode()
public boolean isSetCurve()
public boolean isSetSpeciesGlyph()
public boolean isSetSpeciesReference()
public boolean isSetSpeciesReferenceRole()
public boolean readAttribute(java.lang.String attributeName, java.lang.String prefix, java.lang.String value)
SBase
readAttribute
in interface SBase
readAttribute
in class GraphicalObject
attributeName
- localName of the XML attributeprefix
- prefix of the XML attributevalue
- value of the XML attributetrue
if the attribute has been successfully read.public void setCurve(Curve curve)
curve
- public void setRole(SpeciesReferenceRole valueOf)
valueOf
- public void setSpeciesGlyph(java.lang.String speciesGlyph)
speciesGlyph
- public void setSpeciesReference(SimpleSpeciesReference speciesReference)
speciesReference
- public void setSpeciesReference(java.lang.String speciesReference)
speciesReference
- public boolean unsetCurve()
public void unsetSpeciesReference()
public java.util.Map<java.lang.String,java.lang.String> writeXMLAttributes()
writeXMLAttributes
in interface SBase
writeXMLAttributes
in class GraphicalObject
Map
containing the XML attributes of this object.