Association Member List

This is the complete list of members for Association, including all inherited members.

addAssociation(Association &association)	Association	virtual
addCVTerm(CVTerm *term, bool newBag=false)	SBase
addGene(const std::string &id)	Association	virtual
appendAnnotation(const XMLNode *annotation)	SBase	virtual
appendAnnotation(const std::string &annotation)	SBase	virtual
appendNotes(const XMLNode *notes)	SBase
appendNotes(const std::string &notes)	SBase
Association(unsigned int level=FbcExtension::getDefaultLevel(), unsigned int version=FbcExtension::getDefaultVersion(), unsigned int pkgVersion=FbcExtension::getDefaultPackageVersion())	Association
Association(const XMLNode &node, FbcPkgNamespaces *fbcns)	Association
Association(FbcPkgNamespaces *fbcns)	Association
Association(const Association &source)	Association
clearAssociations()	Association	virtual
clone() const	Association	virtual
createAnd()	Association	virtual
createGene(const std::string reference="")	Association	virtual
createOr()	Association	virtual
deleteDisabledPlugins(bool recursive=true)	SBase
disablePackage(const std::string &pkgURI, const std::string &pkgPrefix)	SBase
enablePackage(const std::string &pkgURI, const std::string &pkgPrefix, bool flag)	SBase
getAllElements(ElementFilter *filter=NULL)	SBase	virtual
getAllElementsFromPlugins(ElementFilter *filter=NULL)	SBase	virtual
getAncestorOfType(int type, const std::string &pkgName="core")	SBase
getAncestorOfType(int type, const std::string pkgName="core") const	SBase
getAnnotation()	SBase
getAnnotation() const	SBase
getAnnotationString()	SBase
getAnnotationString() const	SBase
getColumn() const	SBase
getCVTerm(unsigned int n)	SBase
getCVTerms()	SBase
getCVTerms() const	SBase
getDisabledPlugin(unsigned int n)	SBase
getDisabledPlugin(unsigned int n) const	SBase
getElementByMetaId(const std::string &metaid)	SBase	virtual
getElementByMetaId(const std::string &metaid) const	SBase
getElementBySId(const std::string &id)	SBase	virtual
getElementBySId(const std::string &id) const	SBase
getElementName() const	Association	virtual
getId() const	SBase	virtual
getIdAttribute() const	SBase
getLevel() const	SBase
getLine() const	SBase
getMetaId() const	SBase
getMetaId()	SBase
getModel() const	SBase
getModelHistory() const	SBase
getModelHistory()	SBase
getName() const	SBase	virtual
getNamespaces() const	SBase	virtual
getNotes()	SBase
getNotes() const	SBase
getNotesString()	SBase
getNotesString() const	SBase
getNumAssociations()	Association	virtual
getNumCVTerms()	SBase
getNumDisabledPlugins() const	SBase
getNumPlugins() const	SBase
getPackageCoreVersion() const	SBase
getPackageName() const	SBase
getPackageVersion() const	SBase
getParentSBMLObject()	SBase
getParentSBMLObject() const	SBase
getPlugin(const std::string &package)	SBase
getPlugin(const std::string &package) const	SBase
getPlugin(unsigned int n)	SBase
getPlugin(unsigned int n) const	SBase
getPrefix() const	SBase
getReference() const	Association	virtual
getResourceBiologicalQualifier(std::string resource)	SBase
getResourceModelQualifier(std::string resource)	SBase
getSBMLDocument() const	SBase
getSBMLDocument()	SBase
getSBOTerm() const	SBase
getSBOTermAsURL() const	SBase
getSBOTermID() const	SBase
getType() const	Association	virtual
getTypeCode() const	Association	virtual
getURI() const	SBase
getUserData() const	SBase
getVersion() const	SBase
hasValidLevelVersionNamespaceCombination()	SBase
isFbcAnd() const	Association	virtual
isFbcOr() const	Association	virtual
isGeneProductRef() const	Association	virtual
isPackageEnabled(const std::string &pkgName) const	SBase
isPackageURIEnabled(const std::string &pkgURI) const	SBase
isPkgEnabled(const std::string &pkgName) const	SBase
isPkgURIEnabled(const std::string &pkgURI) const	SBase
isSetAnnotation() const	SBase
isSetId() const	SBase	virtual
isSetIdAttribute() const	SBase
isSetMetaId() const	SBase
isSetModelHistory()	SBase
isSetName() const	SBase	virtual
isSetNotes() const	SBase
isSetReference() const	Association	virtual
isSetSBOTerm() const	SBase
isSetType() const	Association	virtual
isSetUserData() const	SBase
matchesRequiredSBMLNamespacesForAddition(const SBase *sb)	SBase
matchesRequiredSBMLNamespacesForAddition(const SBase *sb) const	SBase
matchesSBMLNamespaces(const SBase *sb)	SBase
matchesSBMLNamespaces(const SBase *sb) const	SBase
operator=(const Association &source)	Association
SBase::operator=(const SBase &rhs)	SBase
parseInfixAssociation(const std::string &association)	Association	static
read(XMLNode &node, XMLErrorSeverityOverride_t flag=LIBSBML_OVERRIDE_DISABLED)	SBase
removeAssociation(int index)	Association	virtual
removeFromParentAndDelete()	SBase	virtual
removeTopLevelAnnotationElement(const std::string &elementName, const std::string elementURI="", bool removeEmpty=true)	SBase
renameMetaIdRefs(const std::string &oldid, const std::string &newid)	SBase	virtual
renameSIdRefs(const std::string &oldid, const std::string &newid)	SBase	virtual
renameUnitSIdRefs(const std::string &oldid, const std::string &newid)	SBase	virtual
replaceTopLevelAnnotationElement(const XMLNode *annotation)	SBase
replaceTopLevelAnnotationElement(const std::string &annotation)	SBase
setAnnotation(const XMLNode *annotation)	SBase	virtual
setAnnotation(const std::string &annotation)	SBase	virtual
setElementText(const std::string &text)	SBase	protectedvirtual
setId(const std::string &sid)	SBase	virtual
setIdAttribute(const std::string &sid)	SBase	virtual
setMetaId(const std::string &metaid)	SBase
setModelHistory(ModelHistory *history)	SBase
setName(const std::string &name)	SBase	virtual
setNamespaces(XMLNamespaces *xmlns)	SBase
setNotes(const XMLNode *notes)	SBase
setNotes(const std::string &notes, bool addXHTMLMarkup=false)	SBase
setReference(const std::string &reference)	Association	virtual
setSBOTerm(int value)	SBase	virtual
setSBOTerm(const std::string &sboid)	SBase	virtual
setType(const AssociationTypeCode_t type)	Association	virtual
setUserData(void *userData)	SBase
toInfix() const	Association
toSBML()	SBase
toXML() const	Association
toXMLNode()	SBase
unsetAnnotation()	SBase
unsetCVTerms()	SBase
unsetId()	SBase	virtual
unsetIdAttribute()	SBase
unsetMetaId()	SBase
unsetModelHistory()	SBase
unsetName()	SBase	virtual
unsetNotes()	SBase
unsetReference()	Association	virtual
unsetSBOTerm()	SBase
unsetType()	Association	virtual
unsetUserData()	SBase
~Association()	Association	virtual
~SBase()	SBase	virtual