libSBML C++ API  5.18.0
CompBase Member List

This is the complete list of members for CompBase, including all inherited members.

addCVTerm(CVTerm *term, bool newBag=false)SBase
appendAnnotation(const XMLNode *annotation)SBasevirtual
appendAnnotation(const std::string &annotation)SBasevirtual
appendNotes(const XMLNode *notes)SBase
appendNotes(const std::string &notes)SBase
clone() const =0SBasepure virtual
CompBase(unsigned int level=CompExtension::getDefaultLevel(), unsigned int version=CompExtension::getDefaultVersion(), unsigned int pkgVersion=CompExtension::getDefaultPackageVersion())CompBase
CompBase(CompPkgNamespaces *compns)CompBase
CompBase(const CompBase &source)CompBase
CompModelPlugin classCompBasefriend
deleteDisabledPlugins(bool recursive=true)SBase
disablePackage(const std::string &pkgURI, const std::string &pkgPrefix)SBase
enablePackage(const std::string &pkgURI, const std::string &pkgPrefix, bool flag)SBase
getAllElements(ElementFilter *filter=NULL)SBasevirtual
getAllElementsFromPlugins(ElementFilter *filter=NULL)SBasevirtual
getAncestorOfType(int type, const std::string &pkgName="core")SBase
getAncestorOfType(int type, const std::string pkgName="core") const SBase
getAnnotation()SBase
getAnnotation() const SBase
getAnnotationString()SBase
getAnnotationString() const SBase
getColumn() const SBase
getCVTerm(unsigned int n)SBase
getCVTerms()SBase
getCVTerms() const SBase
getDisabledPlugin(unsigned int n)SBase
getDisabledPlugin(unsigned int n) const SBase
getElementByMetaId(const std::string &metaid)SBasevirtual
getElementByMetaId(const std::string &metaid) const SBase
getElementBySId(const std::string &id)SBasevirtual
getElementBySId(const std::string &id) const SBase
getElementName() const SBasevirtual
getId() const SBasevirtual
getIdAttribute() const SBase
getLevel() const SBase
getLine() const SBase
getMetaId() const SBase
getMetaId()SBase
getModel() const SBase
getModelHistory() const SBase
getModelHistory()SBase
getName() const SBasevirtual
getNamespaces() const SBasevirtual
getNotes()SBase
getNotes() const SBase
getNotesString()SBase
getNotesString() const SBase
getNumCVTerms()SBase
getNumDisabledPlugins() const SBase
getNumPlugins() const SBase
getPackageCoreVersion() const SBase
getPackageName() const CompBase
getPackageURI() const CompBase
getPackageVersion() const CompBase
getParentModel(SBase *child)CompBasestatic
getParentSBMLObject()SBase
getParentSBMLObject() const SBase
getPlugin(const std::string &package)SBase
getPlugin(const std::string &package) const SBase
getPlugin(unsigned int n)SBase
getPlugin(unsigned int n) const SBase
getPrefix() const SBase
getResourceBiologicalQualifier(std::string resource)SBase
getResourceModelQualifier(std::string resource)SBase
getSBMLDocument() const SBase
getSBMLDocument()SBase
getSBOTerm() const SBase
getSBOTermAsURL() const SBase
getSBOTermID() const SBase
getTypeCode() const SBasevirtual
getURI() const SBase
getUserData() const SBase
getVersion() const SBase
hasValidLevelVersionNamespaceCombination()CompBaseprotected
isPackageEnabled(const std::string &pkgName) const SBase
isPackageURIEnabled(const std::string &pkgURI) const SBase
isPkgEnabled(const std::string &pkgName) const SBase
isPkgURIEnabled(const std::string &pkgURI) const SBase
isSetAnnotation() const SBase
isSetId() const SBasevirtual
isSetIdAttribute() const SBase
isSetMetaId() const SBase
isSetModelHistory()SBase
isSetName() const SBasevirtual
isSetNotes() const SBase
isSetSBOTerm() const SBase
isSetUserData() const SBase
logEmptyString(const std::string &attribute, const std::string &element)CompBaseprotectedvirtual
logInvalidId(const std::string &attribute, const std::string &wrongattribute, const std::string object="")CompBaseprotectedvirtual
logMissingAttribute(const std::string &attribute, const std::string &element)CompBaseprotectedvirtual
logUnknownAttribute(const std::string &attribute, const std::string &element)CompBaseprotectedvirtual
logUnknownElement(const std::string &element)CompBaseprotectedvirtual
matchesRequiredSBMLNamespacesForAddition(const SBase *sb)SBase
matchesRequiredSBMLNamespacesForAddition(const SBase *sb) const SBase
matchesSBMLNamespaces(const SBase *sb)SBase
matchesSBMLNamespaces(const SBase *sb) const SBase
operator=(const CompBase &source)CompBase
SBase::operator=(const SBase &rhs)SBase
read(XMLNode &node, XMLErrorSeverityOverride_t flag=LIBSBML_OVERRIDE_DISABLED)SBase
readAttributes(const XMLAttributes &attributes, const ExpectedAttributes &expectedAttributes, bool hasCompIdName, bool idRequired, CompSBMLErrorCode_t errcode)CompBaseprotectedvirtual
removeFromParentAndDelete()SBasevirtual
removeFromParentAndPorts(SBase *todelete, std::set< SBase * > *removed)CompBaseprotectedstatic
removeTopLevelAnnotationElement(const std::string &elementName, const std::string elementURI="", bool removeEmpty=true)SBase
renameMetaIdRefs(const std::string &oldid, const std::string &newid)SBasevirtual
renameSIdRefs(const std::string &oldid, const std::string &newid)SBasevirtual
renameUnitSIdRefs(const std::string &oldid, const std::string &newid)SBasevirtual
replaceTopLevelAnnotationElement(const XMLNode *annotation)SBase
replaceTopLevelAnnotationElement(const std::string &annotation)SBase
setAnnotation(const XMLNode *annotation)SBasevirtual
setAnnotation(const std::string &annotation)SBasevirtual
setElementText(const std::string &text)SBaseprotectedvirtual
setId(const std::string &sid)SBasevirtual
setIdAttribute(const std::string &sid)SBasevirtual
setMetaId(const std::string &metaid)SBase
setModelHistory(ModelHistory *history)SBase
setName(const std::string &name)SBasevirtual
setNamespaces(XMLNamespaces *xmlns)SBase
setNotes(const XMLNode *notes)SBase
setNotes(const std::string &notes, bool addXHTMLMarkup=false)SBase
setSBOTerm(int value)SBasevirtual
setSBOTerm(const std::string &sboid)SBasevirtual
setUserData(void *userData)SBase
toSBML()SBase
toXMLNode()SBase
unsetAnnotation()SBase
unsetCVTerms()SBase
unsetId()SBasevirtual
unsetIdAttribute()SBase
unsetMetaId()SBase
unsetModelHistory()SBase
unsetName()SBasevirtual
unsetNotes()SBase
unsetSBOTerm()SBase
unsetUserData()SBase
writeAttributes(XMLOutputStream &stream) const CompBaseprotectedvirtual
~CompBase()CompBasevirtual
~SBase()SBasevirtual