libSBML C++ API
5.18.0
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This is the complete list of members for ReplacedBy, including all inherited members.
addCVTerm(CVTerm *term, bool newBag=false) | SBase | |
appendAnnotation(const XMLNode *annotation) | SBase | virtual |
appendAnnotation(const std::string &annotation) | SBase | virtual |
appendNotes(const XMLNode *notes) | SBase | |
appendNotes(const std::string ¬es) | SBase | |
clearReferencedElement() | SBaseRef | virtual |
clone() const | ReplacedBy | virtual |
CompBase(unsigned int level=CompExtension::getDefaultLevel(), unsigned int version=CompExtension::getDefaultVersion(), unsigned int pkgVersion=CompExtension::getDefaultPackageVersion()) | CompBase | |
CompBase(CompPkgNamespaces *compns) | CompBase | |
CompBase(const CompBase &source) | CompBase | |
CompModelPlugin class | ReplacedBy | friend |
createSBaseRef() | SBaseRef | |
deleteDisabledPlugins(bool recursive=true) | SBase | |
disablePackage(const std::string &pkgURI, const std::string &pkgPrefix) | SBase | |
enablePackage(const std::string &pkgURI, const std::string &pkgPrefix, bool flag) | SBase | |
getAllElements(ElementFilter *filter=NULL) | SBaseRef | virtual |
getAllElementsFromPlugins(ElementFilter *filter=NULL) | SBase | virtual |
getAncestorOfType(int type, const std::string &pkgName="core") | SBase | |
getAncestorOfType(int type, const std::string pkgName="core") const | SBase | |
getAnnotation() | SBase | |
getAnnotation() const | SBase | |
getAnnotationString() | SBase | |
getAnnotationString() const | SBase | |
getColumn() const | SBase | |
getCVTerm(unsigned int n) | SBase | |
getCVTerms() | SBase | |
getCVTerms() const | SBase | |
getDisabledPlugin(unsigned int n) | SBase | |
getDisabledPlugin(unsigned int n) const | SBase | |
getElementByMetaId(const std::string &metaid) | SBaseRef | virtual |
CompBase::getElementByMetaId(const std::string &metaid) const | SBase | |
getElementBySId(const std::string &id) | SBaseRef | virtual |
CompBase::getElementBySId(const std::string &id) const | SBase | |
getElementName() const | ReplacedBy | virtual |
getId() const | SBase | virtual |
getIdAttribute() const | SBase | |
getIdRef() const | SBaseRef | virtual |
getLevel() const | SBase | |
getLine() const | SBase | |
getMetaId() const | SBase | |
getMetaId() | SBase | |
getMetaIdRef() const | SBaseRef | virtual |
getModel() const | SBase | |
getModelHistory() const | SBase | |
getModelHistory() | SBase | |
getName() const | SBase | virtual |
getNamespaces() const | SBase | virtual |
getNotes() | SBase | |
getNotes() const | SBase | |
getNotesString() | SBase | |
getNotesString() const | SBase | |
getNumCVTerms() | SBase | |
getNumDisabledPlugins() const | SBase | |
getNumPlugins() const | SBase | |
getNumReferents() const | SBaseRef | virtual |
getPackageCoreVersion() const | SBase | |
getPackageName() const | CompBase | |
getPackageURI() const | CompBase | |
getPackageVersion() const | CompBase | |
getParentModel(SBase *child) | CompBase | static |
getParentSBMLObject() | SBase | |
getParentSBMLObject() const | SBase | |
getPlugin(const std::string &package) | SBase | |
getPlugin(const std::string &package) const | SBase | |
getPlugin(unsigned int n) | SBase | |
getPlugin(unsigned int n) const | SBase | |
getPortRef() const | SBaseRef | virtual |
getPrefix() const | SBase | |
getReferencedElement() | SBaseRef | virtual |
getReferencedElementFrom(Model *model) | SBaseRef | virtual |
getResourceBiologicalQualifier(std::string resource) | SBase | |
getResourceModelQualifier(std::string resource) | SBase | |
getSBaseRef() const | SBaseRef | |
getSBaseRef() | SBaseRef | |
getSBMLDocument() const | SBase | |
getSBMLDocument() | SBase | |
getSBOTerm() const | SBase | |
getSBOTermAsURL() const | SBase | |
getSBOTermID() const | SBase | |
getSubmodelRef() const | Replacing | virtual |
getTypeCode() const | ReplacedBy | virtual |
getUnitRef() const | SBaseRef | virtual |
getURI() const | SBase | |
getUserData() const | SBase | |
getVersion() const | SBase | |
hasRequiredAttributes() const | Replacing | virtual |
hasValidLevelVersionNamespaceCombination() | CompBase | protected |
isPackageEnabled(const std::string &pkgName) const | SBase | |
isPackageURIEnabled(const std::string &pkgURI) const | SBase | |
isPkgEnabled(const std::string &pkgName) const | SBase | |
isPkgURIEnabled(const std::string &pkgURI) const | SBase | |
isSetAnnotation() const | SBase | |
isSetId() const | SBase | virtual |
isSetIdAttribute() const | SBase | |
isSetIdRef() const | SBaseRef | virtual |
isSetMetaId() const | SBase | |
isSetMetaIdRef() const | SBaseRef | virtual |
isSetModelHistory() | SBase | |
isSetName() const | SBase | virtual |
isSetNotes() const | SBase | |
isSetPortRef() const | SBaseRef | virtual |
isSetSBaseRef() const | SBaseRef | |
isSetSBOTerm() const | SBase | |
isSetSubmodelRef() const | Replacing | virtual |
isSetUnitRef() const | SBaseRef | virtual |
isSetUserData() const | SBase | |
logEmptyString(const std::string &attribute, const std::string &element) | CompBase | protectedvirtual |
logInvalidId(const std::string &attribute, const std::string &wrongattribute, const std::string object="") | CompBase | protectedvirtual |
logMissingAttribute(const std::string &attribute, const std::string &element) | CompBase | protectedvirtual |
logUnknownAttribute(const std::string &attribute, const std::string &element) | CompBase | protectedvirtual |
logUnknownElement(const std::string &element) | CompBase | protectedvirtual |
matchesRequiredSBMLNamespacesForAddition(const SBase *sb) | SBase | |
matchesRequiredSBMLNamespacesForAddition(const SBase *sb) const | SBase | |
matchesSBMLNamespaces(const SBase *sb) | SBase | |
matchesSBMLNamespaces(const SBase *sb) const | SBase | |
operator=(const ReplacedBy &source) | ReplacedBy | |
Replacing::operator=(const Replacing &source) | Replacing | |
SBaseRef::operator=(const SBaseRef &source) | SBaseRef | |
CompBase::operator=(const CompBase &source) | CompBase | |
SBase::operator=(const SBase &rhs) | SBase | |
performDeletion() | SBaseRef | virtual |
performReplacement() | Replacing | virtual |
performReplacementAndCollect(std::set< SBase * > *removed, std::set< SBase * > *toremove) | ReplacedBy | protectedvirtual |
read(XMLNode &node, XMLErrorSeverityOverride_t flag=LIBSBML_OVERRIDE_DISABLED) | SBase | |
readAttributes(const XMLAttributes &attributes, const ExpectedAttributes &expectedAttributes, bool hasCompIdName, bool idRequired, CompSBMLErrorCode_t errcode) | CompBase | protectedvirtual |
removeFromParentAndDelete() | ReplacedBy | virtual |
removeFromParentAndPorts(SBase *todelete, std::set< SBase * > *removed) | CompBase | protectedstatic |
removeTopLevelAnnotationElement(const std::string &elementName, const std::string elementURI="", bool removeEmpty=true) | SBase | |
renameMetaIdRefs(const std::string &oldid, const std::string &newid) | SBase | virtual |
renameSIdRefs(const std::string &oldid, const std::string &newid) | Replacing | virtual |
renameUnitSIdRefs(const std::string &oldid, const std::string &newid) | SBase | virtual |
ReplacedBy(unsigned int level=CompExtension::getDefaultLevel(), unsigned int version=CompExtension::getDefaultVersion(), unsigned int pkgVersion=CompExtension::getDefaultPackageVersion()) | ReplacedBy | |
ReplacedBy(CompPkgNamespaces *compns) | ReplacedBy | |
ReplacedBy(const ReplacedBy &source) | ReplacedBy | |
replaceTopLevelAnnotationElement(const XMLNode *annotation) | SBase | |
replaceTopLevelAnnotationElement(const std::string &annotation) | SBase | |
Replacing(unsigned int level=CompExtension::getDefaultLevel(), unsigned int version=CompExtension::getDefaultVersion(), unsigned int pkgVersion=CompExtension::getDefaultPackageVersion()) | Replacing | |
Replacing(CompPkgNamespaces *compns) | Replacing | |
Replacing(const Replacing &source) | Replacing | |
saveReferencedElement() | Replacing | virtual |
SBaseRef(unsigned int level=CompExtension::getDefaultLevel(), unsigned int version=CompExtension::getDefaultVersion(), unsigned int pkgVersion=CompExtension::getDefaultPackageVersion()) | SBaseRef | |
SBaseRef(CompPkgNamespaces *compns) | SBaseRef | |
SBaseRef(const SBaseRef &source) | SBaseRef | |
setAnnotation(const XMLNode *annotation) | SBase | virtual |
setAnnotation(const std::string &annotation) | SBase | virtual |
setElementText(const std::string &text) | SBase | protectedvirtual |
setId(const std::string &sid) | SBase | virtual |
setIdAttribute(const std::string &sid) | SBase | virtual |
setIdRef(const std::string &id) | SBaseRef | virtual |
setMetaId(const std::string &metaid) | SBase | |
setMetaIdRef(const std::string &id) | SBaseRef | virtual |
setModelHistory(ModelHistory *history) | SBase | |
setName(const std::string &name) | SBase | virtual |
setNamespaces(XMLNamespaces *xmlns) | SBase | |
setNotes(const XMLNode *notes) | SBase | |
setNotes(const std::string ¬es, bool addXHTMLMarkup=false) | SBase | |
setPortRef(const std::string &id) | SBaseRef | virtual |
setSBaseRef(const SBaseRef *sBaseRef) | SBaseRef | |
setSBOTerm(int value) | SBase | virtual |
setSBOTerm(const std::string &sboid) | SBase | virtual |
setSubmodelRef(const std::string &id) | Replacing | virtual |
setUnitRef(const std::string &id) | SBaseRef | virtual |
setUserData(void *userData) | SBase | |
toSBML() | SBase | |
toXMLNode() | SBase | |
unsetAnnotation() | SBase | |
unsetCVTerms() | SBase | |
unsetId() | SBase | virtual |
unsetIdAttribute() | SBase | |
unsetIdRef() | SBaseRef | virtual |
unsetMetaId() | SBase | |
unsetMetaIdRef() | SBaseRef | virtual |
unsetModelHistory() | SBase | |
unsetName() | SBase | virtual |
unsetNotes() | SBase | |
unsetPortRef() | SBaseRef | virtual |
unsetSBaseRef() | SBaseRef | virtual |
unsetSBOTerm() | SBase | |
unsetSubmodelRef() | Replacing | virtual |
unsetUnitRef() | SBaseRef | virtual |
unsetUserData() | SBase | |
writeAttributes(XMLOutputStream &stream) const | CompBase | protectedvirtual |
~CompBase() | CompBase | virtual |
~ReplacedBy() | ReplacedBy | virtual |
~Replacing() | Replacing | virtual |
~SBase() | SBase | virtual |
~SBaseRef() | SBaseRef | virtual |