| addCVTerm(CVTerm *term, bool newBag=false) | SBase | |
| addDash(unsigned int dash) | GraphicalPrimitive1D | |
| addModifiedDate(Date *date) | SBase | |
| appendAnnotation(const XMLNode *annotation) | SBase | virtual |
| appendAnnotation(const std::string &annotation) | SBase | virtual |
| appendNotes(const XMLNode *notes) | SBase | |
| appendNotes(const std::string ¬es) | SBase | |
| clearDashes() | GraphicalPrimitive1D | |
| clone() const | GraphicalPrimitive2D | virtual |
| deleteDisabledPlugins(bool recursive=true) | SBase | |
| disablePackage(const std::string &pkgURI, const std::string &pkgPrefix) | SBase | |
| enablePackage(const std::string &pkgURI, const std::string &pkgPrefix, bool flag) | SBase | |
| getAllElements(ElementFilter *filter=NULL) | SBase | virtual |
| getAllElementsFromPlugins(ElementFilter *filter=NULL) | SBase | virtual |
| getAncestorOfType(int type, const std::string &pkgName="core") | SBase | |
| getAncestorOfType(int type, const std::string pkgName="core") const | SBase | |
| getAnnotation() | SBase | |
| getAnnotation() const | SBase | |
| getAnnotationString() | SBase | |
| getAnnotationString() const | SBase | |
| getColumn() const | SBase | |
| getCreatedDate() const | SBase | |
| getCreatedDate() | SBase | |
| getCVTerm(unsigned int n) | SBase | |
| getCVTerms() | SBase | |
| getCVTerms() const | SBase | |
| getDashArray() const | GraphicalPrimitive1D | |
| getDashArray() | GraphicalPrimitive1D | |
| getDashByIndex(unsigned int index) const | GraphicalPrimitive1D | |
| getDisabledPlugin(unsigned int n) | SBase | |
| getDisabledPlugin(unsigned int n) const | SBase | |
| getElementByMetaId(const std::string &metaid) | SBase | virtual |
| getElementByMetaId(const std::string &metaid) const | SBase | |
| getElementBySId(const std::string &id) | SBase | virtual |
| getElementBySId(const std::string &id) const | SBase | virtual |
| getElementName() const | GraphicalPrimitive2D | virtual |
| getFill() const | GraphicalPrimitive2D | |
| getFillColor() const | GraphicalPrimitive2D | |
| getFillRule() const | GraphicalPrimitive2D | |
| getFillRuleAsString() const | GraphicalPrimitive2D | |
| getId() const | GraphicalPrimitive1D | virtual |
| getIdAttribute() const | SBase | |
| getIdentityMatrix() | Transformation | static |
| getIdentityMatrix2D() | Transformation2D | static |
| getLevel() const | SBase | |
| getLine() const | SBase | |
| getMatrix() const | Transformation | |
| getMatrix2D() const | Transformation2D | |
| getMetaId() const | SBase | |
| getMetaId() | SBase | |
| getModel() const | SBase | |
| getModelHistory() const | SBase | |
| getModelHistory() | SBase | |
| getModifiedDate(unsigned int n) | SBase | |
| getName() const | Transformation | virtual |
| getNamespaces() const | SBase | virtual |
| getNotes() | SBase | |
| getNotes() const | SBase | |
| getNotesString() | SBase | |
| getNotesString() const | SBase | |
| getNumCVTerms() const | SBase | |
| getNumDashes() const | GraphicalPrimitive1D | |
| getNumDisabledPlugins() const | SBase | |
| getNumModifiedDates() | SBase | |
| getNumPlugins() const | SBase | |
| getPackageCoreVersion() const | SBase | |
| getPackageName() const | SBase | |
| getPackageVersion() const | SBase | |
| getParentSBMLObject() | SBase | |
| getParentSBMLObject() const | SBase | |
| getPlugin(const std::string &package) | SBase | |
| getPlugin(const std::string &package) const | SBase | |
| getPlugin(unsigned int n) | SBase | |
| getPlugin(unsigned int n) const | SBase | |
| getPrefix() const | SBase | |
| getResourceBiologicalQualifier(std::string resource) const | SBase | |
| getResourceModelQualifier(std::string resource) const | SBase | |
| getSBMLDocument() const | SBase | |
| getSBMLDocument() | SBase | |
| getSBOTerm() const | SBase | |
| getSBOTermAsURL() const | SBase | |
| getSBOTermID() const | SBase | |
| getStroke() const | GraphicalPrimitive1D | |
| getStrokeDashArray() const | GraphicalPrimitive1D | |
| getStrokeWidth() const | GraphicalPrimitive1D | |
| getTransform(double *outArray) const | Transformation | |
| getTypeCode() const | GraphicalPrimitive2D | virtual |
| getURI() const | SBase | |
| getUserData() const | SBase | |
| getVersion() const | SBase | |
| GraphicalPrimitive1D(unsigned int level=RenderExtension::getDefaultLevel(), unsigned int version=RenderExtension::getDefaultVersion(), unsigned int pkgVersion=RenderExtension::getDefaultPackageVersion()) | GraphicalPrimitive1D | |
| GraphicalPrimitive1D(RenderPkgNamespaces *renderns) | GraphicalPrimitive1D | |
| GraphicalPrimitive1D(const XMLNode &node, unsigned int l2version=4) | GraphicalPrimitive1D | |
| GraphicalPrimitive1D(RenderPkgNamespaces *renderns, const std::string &id) | GraphicalPrimitive1D | |
| GraphicalPrimitive1D(const GraphicalPrimitive1D &orig) | GraphicalPrimitive1D | |
| GraphicalPrimitive2D(unsigned int level=RenderExtension::getDefaultLevel(), unsigned int version=RenderExtension::getDefaultVersion(), unsigned int pkgVersion=RenderExtension::getDefaultPackageVersion()) | GraphicalPrimitive2D | |
| GraphicalPrimitive2D(RenderPkgNamespaces *renderns) | GraphicalPrimitive2D | |
| GraphicalPrimitive2D(const XMLNode &node, unsigned int l2Version=4) | GraphicalPrimitive2D | |
| GraphicalPrimitive2D(RenderPkgNamespaces *renderns, const std::string &id) | GraphicalPrimitive2D | |
| GraphicalPrimitive2D(const GraphicalPrimitive2D &orig) | GraphicalPrimitive2D | |
| hasRequiredAttributes() const | GraphicalPrimitive2D | virtual |
| hasValidLevelVersionNamespaceCombination() | SBase | |
| insertDash(unsigned int index, unsigned int dash) | GraphicalPrimitive1D | |
| isEllipse() const | GraphicalPrimitive2D | virtual |
| isImage() const | Transformation2D | virtual |
| isLineEnding() const | GraphicalPrimitive2D | virtual |
| isPackageEnabled(const std::string &pkgName) const | SBase | |
| isPackageURIEnabled(const std::string &pkgURI) const | SBase | |
| isPkgEnabled(const std::string &pkgName) const | SBase | |
| isPkgURIEnabled(const std::string &pkgURI) const | SBase | |
| isPolygon() const | GraphicalPrimitive2D | virtual |
| isRectangle() const | GraphicalPrimitive2D | virtual |
| isRenderCurve() const | GraphicalPrimitive1D | virtual |
| isRenderGroup() const | GraphicalPrimitive2D | virtual |
| isSetAnnotation() const | SBase | |
| isSetCreatedDate() const | SBase | |
| isSetDashArray() const | GraphicalPrimitive1D | |
| isSetFill() const | GraphicalPrimitive2D | |
| isSetFillColor() const | GraphicalPrimitive2D | |
| isSetFillRule() const | GraphicalPrimitive2D | |
| isSetId() const | GraphicalPrimitive1D | virtual |
| isSetIdAttribute() const | SBase | |
| isSetMatrix() const | Transformation | |
| isSetMetaId() const | SBase | |
| isSetModelHistory() const | SBase | |
| isSetModifiedDate() const | SBase | |
| isSetName() const | Transformation | virtual |
| isSetNotes() const | SBase | |
| isSetSBOTerm() const | SBase | |
| isSetStroke() const | GraphicalPrimitive1D | |
| isSetStrokeDashArray() const | GraphicalPrimitive1D | |
| isSetStrokeWidth() const | GraphicalPrimitive1D | |
| isSetTransform() const | Transformation | |
| isSetUserData() const | SBase | |
| isText() const | GraphicalPrimitive1D | virtual |
| matchesRequiredSBMLNamespacesForAddition(const SBase *sb) | SBase | |
| matchesRequiredSBMLNamespacesForAddition(const SBase *sb) const | SBase | |
| matchesSBMLNamespaces(const SBase *sb) | SBase | |
| matchesSBMLNamespaces(const SBase *sb) const | SBase | |
| operator=(const GraphicalPrimitive2D &rhs) | GraphicalPrimitive2D | |
| GraphicalPrimitive1D::operator=(const GraphicalPrimitive1D &rhs) | GraphicalPrimitive1D | |
| Transformation2D::operator=(const Transformation2D &rhs) | Transformation2D | |
| Transformation::operator=(const Transformation &rhs) | Transformation | |
| SBase::operator=(const SBase &rhs) | SBase | |
| read(const XMLNode &node, XMLErrorSeverityOverride_t flag=LIBSBML_OVERRIDE_DISABLED) | SBase | |
| removeDash(unsigned int index) | GraphicalPrimitive1D | |
| removeFromParentAndDelete() | SBase | virtual |
| removeTopLevelAnnotationElement(const std::string &elementName, const std::string elementURI="", bool removeEmpty=true) | SBase | |
| renameMetaIdRefs(const std::string &oldid, const std::string &newid) | SBase | virtual |
| renameSIdRefs(const std::string &oldid, const std::string &newid) | SBase | virtual |
| renameUnitSIdRefs(const std::string &oldid, const std::string &newid) | SBase | virtual |
| replaceTopLevelAnnotationElement(const XMLNode *annotation) | SBase | |
| replaceTopLevelAnnotationElement(const std::string &annotation) | SBase | |
| setAnnotation(const XMLNode *annotation) | SBase | virtual |
| setAnnotation(const std::string &annotation) | SBase | virtual |
| setCreatedDate(Date *date) | SBase | |
| setDashArray(const std::vector< unsigned int > &array) | GraphicalPrimitive1D | |
| setDashArray(const std::string &arrayString) | GraphicalPrimitive1D | |
| setDashByIndex(unsigned int index, unsigned int dash) | GraphicalPrimitive1D | |
| setElementText(const std::string &text) | SBase | protectedvirtual |
| setFill(const std::string &fill) | GraphicalPrimitive2D | |
| setFillColor(const std::string &color) | GraphicalPrimitive2D | |
| setFillRule(FILL_RULE rule) | GraphicalPrimitive2D | |
| setFillRule(const FillRule_t fillRule) | GraphicalPrimitive2D | |
| setFillRule(const std::string &fillRule) | GraphicalPrimitive2D | |
| setId(const std::string &id) | GraphicalPrimitive1D | virtual |
| setIdAttribute(const std::string &sid) | SBase | virtual |
| setMatrix(const double m[12]) | Transformation2D | |
| setMatrix2D(const double m[6]) | Transformation2D | |
| setMetaId(const std::string &metaid) | SBase | |
| setModelHistory(ModelHistory *history) | SBase | |
| setName(const std::string &name) | Transformation | virtual |
| setNamespaces(XMLNamespaces *xmlns) | SBase | |
| setNotes(const XMLNode *notes) | SBase | |
| setNotes(const std::string ¬es, bool addXHTMLMarkup=false) | SBase | |
| setSBOTerm(int value) | SBase | virtual |
| setSBOTerm(const std::string &sboid) | SBase | virtual |
| setStroke(const std::string &stroke) | GraphicalPrimitive1D | |
| setStrokeDashArray(const std::vector< unsigned int > &array) | GraphicalPrimitive1D | |
| setStrokeWidth(double strokeWidth) | GraphicalPrimitive1D | |
| setTransform(double *inArray) | Transformation | |
| setUserData(void *userData) | SBase | |
| toSBML() | SBase | |
| toXML() const =0 | GraphicalPrimitive1D | pure virtual |
| toXMLNode() | SBase | |
| Transformation(unsigned int level=RenderExtension::getDefaultLevel(), unsigned int version=RenderExtension::getDefaultVersion(), unsigned int pkgVersion=RenderExtension::getDefaultPackageVersion()) | Transformation | |
| Transformation(RenderPkgNamespaces *renderns) | Transformation | |
| Transformation(const Transformation &orig) | Transformation | |
| Transformation2D(unsigned int level=RenderExtension::getDefaultLevel(), unsigned int version=RenderExtension::getDefaultVersion(), unsigned int pkgVersion=RenderExtension::getDefaultPackageVersion()) | Transformation2D | |
| Transformation2D(RenderPkgNamespaces *renderns) | Transformation2D | |
| Transformation2D(const XMLNode &node, unsigned int l2version=4) | Transformation2D | |
| Transformation2D(const Transformation2D &orig) | Transformation2D | |
| Transformation2D(RenderPkgNamespaces *renderns, const double m[6]) | Transformation2D | |
| unsetAnnotation() | SBase | |
| unsetCreatedDate() | SBase | |
| unsetCVTerms() | SBase | |
| unsetFill() | GraphicalPrimitive2D | |
| unsetFillRule() | GraphicalPrimitive2D | |
| unsetId() | GraphicalPrimitive1D | virtual |
| unsetIdAttribute() | SBase | |
| unsetMatrix() | Transformation | |
| unsetMetaId() | SBase | |
| unsetModelHistory() | SBase | |
| unsetModifiedDates() | SBase | |
| unsetName() | Transformation | virtual |
| unsetNotes() | SBase | |
| unsetSBOTerm() | SBase | |
| unsetStroke() | GraphicalPrimitive1D | |
| unsetStrokeDashArray() | GraphicalPrimitive1D | |
| unsetStrokeWidth() | GraphicalPrimitive1D | |
| unsetTransform() | Transformation | |
| unsetUserData() | SBase | |
| ~GraphicalPrimitive1D() | GraphicalPrimitive1D | virtual |
| ~GraphicalPrimitive2D() | GraphicalPrimitive2D | virtual |
| ~SBase() | SBase | virtual |
| ~Transformation() | Transformation | virtual |
| ~Transformation2D() | Transformation2D | virtual |