| addCVTerm(CVTerm *term, bool newBag=false) | SBase | |
| appendAnnotation(const XMLNode *annotation) | SBase | virtual |
| appendAnnotation(const std::string &annotation) | SBase | virtual |
| appendNotes(const XMLNode *notes) | SBase | |
| appendNotes(const std::string ¬es) | SBase | |
| clone() const | DefaultValues | virtual |
| DefaultValues(unsigned int level=RenderExtension::getDefaultLevel(), unsigned int version=RenderExtension::getDefaultVersion(), unsigned int pkgVersion=RenderExtension::getDefaultPackageVersion()) | DefaultValues | |
| DefaultValues(RenderPkgNamespaces *renderns) | DefaultValues | |
| DefaultValues(const DefaultValues &orig) | DefaultValues | |
| deleteDisabledPlugins(bool recursive=true) | SBase | |
| disablePackage(const std::string &pkgURI, const std::string &pkgPrefix) | SBase | |
| enablePackage(const std::string &pkgURI, const std::string &pkgPrefix, bool flag) | SBase | |
| getAllElements(ElementFilter *filter=NULL) | SBase | virtual |
| getAllElementsFromPlugins(ElementFilter *filter=NULL) | SBase | virtual |
| getAncestorOfType(int type, const std::string &pkgName="core") | SBase | |
| getAncestorOfType(int type, const std::string pkgName="core") const | SBase | |
| getAnnotation() | SBase | |
| getAnnotation() const | SBase | |
| getAnnotationString() | SBase | |
| getAnnotationString() const | SBase | |
| getBackgroundColor() const | DefaultValues | |
| getColumn() const | SBase | |
| getCVTerm(unsigned int n) | SBase | |
| getCVTerms() | SBase | |
| getCVTerms() const | SBase | |
| getDefault_z() const | DefaultValues | |
| getDisabledPlugin(unsigned int n) | SBase | |
| getDisabledPlugin(unsigned int n) const | SBase | |
| getElementByMetaId(const std::string &metaid) | SBase | virtual |
| getElementByMetaId(const std::string &metaid) const | SBase | |
| getElementBySId(const std::string &id) | SBase | virtual |
| getElementBySId(const std::string &id) const | SBase | |
| getElementName() const | DefaultValues | virtual |
| getEnableRotationalMapping() const | DefaultValues | |
| getEndHead() const | DefaultValues | |
| getFill() const | DefaultValues | |
| getFillRule() const | DefaultValues | |
| getFillRuleAsString() const | DefaultValues | |
| getFontFamily() const | DefaultValues | |
| getFontSize() const | DefaultValues | |
| getFontStyle() const | DefaultValues | |
| getFontStyleAsString() const | DefaultValues | |
| getFontWeight() const | DefaultValues | |
| getFontWeightAsString() const | DefaultValues | |
| getId() const | SBase | virtual |
| getIdAttribute() const | SBase | |
| getLevel() const | SBase | |
| getLine() const | SBase | |
| getLinearGradient_x1() const | DefaultValues | |
| getLinearGradient_x2() const | DefaultValues | |
| getLinearGradient_y1() const | DefaultValues | |
| getLinearGradient_y2() const | DefaultValues | |
| getLinearGradient_z1() const | DefaultValues | |
| getLinearGradient_z2() const | DefaultValues | |
| getMetaId() const | SBase | |
| getMetaId() | SBase | |
| getModel() const | SBase | |
| getModelHistory() const | SBase | |
| getModelHistory() | SBase | |
| getName() const | SBase | virtual |
| getNamespaces() const | SBase | virtual |
| getNotes() | SBase | |
| getNotes() const | SBase | |
| getNotesString() | SBase | |
| getNotesString() const | SBase | |
| getNumCVTerms() | SBase | |
| getNumDisabledPlugins() const | SBase | |
| getNumPlugins() const | SBase | |
| getPackageCoreVersion() const | SBase | |
| getPackageName() const | SBase | |
| getPackageVersion() const | SBase | |
| getParentSBMLObject() | SBase | |
| getParentSBMLObject() const | SBase | |
| getPlugin(const std::string &package) | SBase | |
| getPlugin(const std::string &package) const | SBase | |
| getPlugin(unsigned int n) | SBase | |
| getPlugin(unsigned int n) const | SBase | |
| getPrefix() const | SBase | |
| getRadialGradient_cx() const | DefaultValues | |
| getRadialGradient_cy() const | DefaultValues | |
| getRadialGradient_cz() const | DefaultValues | |
| getRadialGradient_fx() const | DefaultValues | |
| getRadialGradient_fy() const | DefaultValues | |
| getRadialGradient_fz() const | DefaultValues | |
| getRadialGradient_r() const | DefaultValues | |
| getResourceBiologicalQualifier(std::string resource) | SBase | |
| getResourceModelQualifier(std::string resource) | SBase | |
| getSBMLDocument() const | SBase | |
| getSBMLDocument() | SBase | |
| getSBOTerm() const | SBase | |
| getSBOTermAsURL() const | SBase | |
| getSBOTermID() const | SBase | |
| getSpreadMethod() const | DefaultValues | |
| getSpreadMethodAsString() const | DefaultValues | |
| getStartHead() const | DefaultValues | |
| getStroke() const | DefaultValues | |
| getStrokeWidth() const | DefaultValues | |
| getTextAnchor() const | DefaultValues | |
| getTextAnchorAsString() const | DefaultValues | |
| getTypeCode() const | DefaultValues | virtual |
| getURI() const | SBase | |
| getUserData() const | SBase | |
| getVersion() const | SBase | |
| getVTextAnchor() const | DefaultValues | |
| getVTextAnchorAsString() const | DefaultValues | |
| hasRequiredAttributes() const | DefaultValues | virtual |
| hasValidLevelVersionNamespaceCombination() | SBase | |
| isPackageEnabled(const std::string &pkgName) const | SBase | |
| isPackageURIEnabled(const std::string &pkgURI) const | SBase | |
| isPkgEnabled(const std::string &pkgName) const | SBase | |
| isPkgURIEnabled(const std::string &pkgURI) const | SBase | |
| isSetAnnotation() const | SBase | |
| isSetBackgroundColor() const | DefaultValues | |
| isSetDefault_z() const | DefaultValues | |
| isSetEnableRotationalMapping() const | DefaultValues | |
| isSetEndHead() const | DefaultValues | |
| isSetFill() const | DefaultValues | |
| isSetFillRule() const | DefaultValues | |
| isSetFontFamily() const | DefaultValues | |
| isSetFontSize() const | DefaultValues | |
| isSetFontStyle() const | DefaultValues | |
| isSetFontWeight() const | DefaultValues | |
| isSetId() const | SBase | virtual |
| isSetIdAttribute() const | SBase | |
| isSetLinearGradient_x1() const | DefaultValues | |
| isSetLinearGradient_x2() const | DefaultValues | |
| isSetLinearGradient_y1() const | DefaultValues | |
| isSetLinearGradient_y2() const | DefaultValues | |
| isSetLinearGradient_z1() const | DefaultValues | |
| isSetLinearGradient_z2() const | DefaultValues | |
| isSetMetaId() const | SBase | |
| isSetModelHistory() | SBase | |
| isSetName() const | SBase | virtual |
| isSetNotes() const | SBase | |
| isSetRadialGradient_cx() const | DefaultValues | |
| isSetRadialGradient_cy() const | DefaultValues | |
| isSetRadialGradient_cz() const | DefaultValues | |
| isSetRadialGradient_fx() const | DefaultValues | |
| isSetRadialGradient_fy() const | DefaultValues | |
| isSetRadialGradient_fz() const | DefaultValues | |
| isSetRadialGradient_r() const | DefaultValues | |
| isSetSBOTerm() const | SBase | |
| isSetSpreadMethod() const | DefaultValues | |
| isSetStartHead() const | DefaultValues | |
| isSetStroke() const | DefaultValues | |
| isSetStrokeWidth() const | DefaultValues | |
| isSetTextAnchor() const | DefaultValues | |
| isSetUserData() const | SBase | |
| isSetVTextAnchor() const | DefaultValues | |
| matchesRequiredSBMLNamespacesForAddition(const SBase *sb) | SBase | |
| matchesRequiredSBMLNamespacesForAddition(const SBase *sb) const | SBase | |
| matchesSBMLNamespaces(const SBase *sb) | SBase | |
| matchesSBMLNamespaces(const SBase *sb) const | SBase | |
| operator=(const DefaultValues &rhs) | DefaultValues | |
| SBase::operator=(const SBase &rhs) | SBase | |
| read(XMLNode &node, XMLErrorSeverityOverride_t flag=LIBSBML_OVERRIDE_DISABLED) | SBase | |
| removeFromParentAndDelete() | SBase | virtual |
| removeTopLevelAnnotationElement(const std::string &elementName, const std::string elementURI="", bool removeEmpty=true) | SBase | |
| renameMetaIdRefs(const std::string &oldid, const std::string &newid) | SBase | virtual |
| renameSIdRefs(const std::string &oldid, const std::string &newid) | DefaultValues | virtual |
| renameUnitSIdRefs(const std::string &oldid, const std::string &newid) | SBase | virtual |
| replaceTopLevelAnnotationElement(const XMLNode *annotation) | SBase | |
| replaceTopLevelAnnotationElement(const std::string &annotation) | SBase | |
| setAnnotation(const XMLNode *annotation) | SBase | virtual |
| setAnnotation(const std::string &annotation) | SBase | virtual |
| setBackgroundColor(const std::string &backgroundColor) | DefaultValues | |
| setDefault_z(const RelAbsVector &default_z) | DefaultValues | |
| setElementText(const std::string &text) | SBase | protectedvirtual |
| setEnableRotationalMapping(bool enableRotationalMapping) | DefaultValues | |
| setEndHead(const std::string &endHead) | DefaultValues | |
| setFill(const std::string &fill) | DefaultValues | |
| setFillRule(const GraphicalPrimitive2D::FILL_RULE fillRule) | DefaultValues | |
| setFillRule(FillRule_t fillRule) | DefaultValues | |
| setFillRule(const std::string &fillRule) | DefaultValues | |
| setFontFamily(const std::string &fontFamily) | DefaultValues | |
| setFontSize(const RelAbsVector &fontSize) | DefaultValues | |
| setFontStyle(const Text::FONT_STYLE fontStyle) | DefaultValues | |
| setFontStyle(FontStyle_t fontStyle) | DefaultValues | |
| setFontStyle(const std::string &fontStyle) | DefaultValues | |
| setFontWeight(const Text::FONT_WEIGHT fontWeight) | DefaultValues | |
| setFontWeight(FontWeight_t fontWeight) | DefaultValues | |
| setFontWeight(const std::string &fontWeight) | DefaultValues | |
| setId(const std::string &sid) | SBase | virtual |
| setIdAttribute(const std::string &sid) | SBase | virtual |
| setLinearGradient_x1(const RelAbsVector &linearGradient_x1) | DefaultValues | |
| setLinearGradient_x2(const RelAbsVector &linearGradient_x2) | DefaultValues | |
| setLinearGradient_y1(const RelAbsVector &linearGradient_y1) | DefaultValues | |
| setLinearGradient_y2(const RelAbsVector &linearGradient_y2) | DefaultValues | |
| setLinearGradient_z1(const RelAbsVector &linearGradient_z1) | DefaultValues | |
| setLinearGradient_z2(const RelAbsVector &linearGradient_z2) | DefaultValues | |
| setMetaId(const std::string &metaid) | SBase | |
| setModelHistory(ModelHistory *history) | SBase | |
| setName(const std::string &name) | SBase | virtual |
| setNamespaces(XMLNamespaces *xmlns) | SBase | |
| setNotes(const XMLNode *notes) | SBase | |
| setNotes(const std::string ¬es, bool addXHTMLMarkup=false) | SBase | |
| setRadialGradient_cx(const RelAbsVector &radialGradient_cx) | DefaultValues | |
| setRadialGradient_cy(const RelAbsVector &radialGradient_cy) | DefaultValues | |
| setRadialGradient_cz(const RelAbsVector &radialGradient_cz) | DefaultValues | |
| setRadialGradient_fx(const RelAbsVector &radialGradient_fx) | DefaultValues | |
| setRadialGradient_fy(const RelAbsVector &radialGradient_fy) | DefaultValues | |
| setRadialGradient_fz(const RelAbsVector &radialGradient_fz) | DefaultValues | |
| setRadialGradient_r(const RelAbsVector &radialGradient_r) | DefaultValues | |
| setSBOTerm(int value) | SBase | virtual |
| setSBOTerm(const std::string &sboid) | SBase | virtual |
| setSpreadMethod(const GradientBase::SPREADMETHOD spreadMethod) | DefaultValues | |
| setSpreadMethod(const GradientSpreadMethod_t spreadMethod) | DefaultValues | |
| setSpreadMethod(const std::string &spreadMethod) | DefaultValues | |
| setStartHead(const std::string &startHead) | DefaultValues | |
| setStroke(const std::string &stroke) | DefaultValues | |
| setStrokeWidth(double strokeWidth) | DefaultValues | |
| setTextAnchor(const Text::TEXT_ANCHOR textAnchor) | DefaultValues | |
| setTextAnchor(HTextAnchor_t textAnchor) | DefaultValues | |
| setTextAnchor(const std::string &textAnchor) | DefaultValues | |
| setUserData(void *userData) | SBase | |
| setVTextAnchor(const Text::TEXT_ANCHOR vtextAnchor) | DefaultValues | |
| setVTextAnchor(VTextAnchor_t vtextAnchor) | DefaultValues | |
| setVTextAnchor(const std::string &vtextAnchor) | DefaultValues | |
| toSBML() | SBase | |
| toXMLNode() | SBase | |
| unsetAnnotation() | SBase | |
| unsetBackgroundColor() | DefaultValues | |
| unsetCVTerms() | SBase | |
| unsetDefault_z() | DefaultValues | |
| unsetEnableRotationalMapping() | DefaultValues | |
| unsetEndHead() | DefaultValues | |
| unsetFill() | DefaultValues | |
| unsetFillRule() | DefaultValues | |
| unsetFontFamily() | DefaultValues | |
| unsetFontSize() | DefaultValues | |
| unsetFontStyle() | DefaultValues | |
| unsetFontWeight() | DefaultValues | |
| unsetId() | SBase | virtual |
| unsetIdAttribute() | SBase | |
| unsetLinearGradient_x1() | DefaultValues | |
| unsetLinearGradient_x2() | DefaultValues | |
| unsetLinearGradient_y1() | DefaultValues | |
| unsetLinearGradient_y2() | DefaultValues | |
| unsetLinearGradient_z1() | DefaultValues | |
| unsetLinearGradient_z2() | DefaultValues | |
| unsetMetaId() | SBase | |
| unsetModelHistory() | SBase | |
| unsetName() | SBase | virtual |
| unsetNotes() | SBase | |
| unsetRadialGradient_cx() | DefaultValues | |
| unsetRadialGradient_cy() | DefaultValues | |
| unsetRadialGradient_cz() | DefaultValues | |
| unsetRadialGradient_fx() | DefaultValues | |
| unsetRadialGradient_fy() | DefaultValues | |
| unsetRadialGradient_fz() | DefaultValues | |
| unsetRadialGradient_r() | DefaultValues | |
| unsetSBOTerm() | SBase | |
| unsetSpreadMethod() | DefaultValues | |
| unsetStartHead() | DefaultValues | |
| unsetStroke() | DefaultValues | |
| unsetStrokeWidth() | DefaultValues | |
| unsetTextAnchor() | DefaultValues | |
| unsetUserData() | SBase | |
| unsetVTextAnchor() | DefaultValues | |
| ~DefaultValues() | DefaultValues | virtual |
| ~SBase() | SBase | virtual |
