org.sbml.jsbml
public class Event extends AbstractNamedSBaseWithUnit implements UniqueNamedSBase
Event
s were
introduced to SBML in Level 2, this class must not be used for models in
Level 1.Modifier and Type | Field and Description |
---|---|
private Delay |
delay
Represents the delay sub-element of an event element.
|
private boolean |
isSetUseValuesFromTriggerTime |
private ListOf<EventAssignment> |
listOfEventAssignments
Represents the listOfEventAssignments sub-element of an event element.
|
private Priority |
priority
Represents the priority sub-element of an event.
|
private static long |
serialVersionUID
Generated serial version identifier.
|
private Trigger |
trigger
Represents the trigger sub-element of an event element.
|
private java.lang.Boolean |
useValuesFromTriggerTime
Represents the 'useValuesFromTriggerTime' XML attribute of an event
element.
|
unitsID
ignoredExtensions, ignoredXMLElements, lv
listOfListeners, parent, UNKNOWN_ATTRIBUTES, UNKNOWN_ELEMENTS
Constructor and Description |
---|
Event()
Creates an Event instance.
|
Event(Event event)
Creates an Event instance from a given event.
|
Event(int level,
int version)
Creates an Event from a level and version.
|
Event(java.lang.String id) |
Event(java.lang.String id,
int level,
int version)
Creates an Event instance from an id, level and version.
|
Event(java.lang.String id,
java.lang.String name,
int level,
int version)
Creates an Event instance from an id, name, level and version.
|
Modifier and Type | Method and Description |
---|---|
boolean |
addEventAssignment(EventAssignment eventass)
Adds an EventAssignment instance to the list of EventAssignments of this
Event.
|
void |
clearListOfEventAssignments()
Remove all the EventAssignments of the listOfEventAssignments of this
Event.
|
Event |
clone()
Creates a deep copy of this object, i.e., a new
SBase with the same properties
like this one. |
boolean |
containsUndeclaredUnits()
Deprecated.
|
Delay |
createDelay() |
Delay |
createDelay(ASTNode math) |
EventAssignment |
createEventAssignment() |
EventAssignment |
createEventAssignment(java.lang.String variable,
ASTNode math) |
EventAssignment |
createEventAssignment(Variable variable,
ASTNode math) |
Priority |
createPriority()
|
Priority |
createPriority(ASTNode math) |
Trigger |
createTrigger() |
Trigger |
createTrigger(boolean initialValue,
boolean persistent) |
Trigger |
createTrigger(boolean initialValue,
boolean persistent,
ASTNode math) |
boolean |
equals(java.lang.Object object)
|
boolean |
getAllowsChildren() |
javax.swing.tree.TreeNode |
getChildAt(int index) |
int |
getChildCount() |
Delay |
getDelay() |
UnitDefinition |
getDerivedUnitDefinition()
Deprecated.
|
java.lang.String |
getDerivedUnits()
Deprecated.
|
EventAssignment |
getEventAssignment(int n) |
int |
getEventAssignmentCount() |
ListOf<EventAssignment> |
getListOfEventAssignments() |
int |
getNumEventAssignments() |
ListOf<Event> |
getParent()
This is equivalent to calling
AbstractSBase.getParentSBMLObject() , but this
method is needed for TreeNode . |
java.lang.String |
getPredefinedUnitID()
Returns the predefined unit identifier for this data type with the
current level/version combination.
|
Priority |
getPriority() |
java.lang.String |
getTimeUnits()
Deprecated.
|
java.lang.String |
getTimeUnitsID()
Deprecated.
|
UnitDefinition |
getTimeUnitsInstance()
Deprecated.
|
Trigger |
getTrigger() |
java.lang.String |
getUnits()
Deprecated.
|
UnitDefinition |
getUnitsInstance()
Deprecated.
|
boolean |
getUseValuesFromTriggerTime() |
int |
hashCode() |
void |
initDefaults()
Initializes the default values using the current Level/Version configuration.
|
void |
initDefaults(int level,
int version)
Initializes the default values of this
Event . |
boolean |
isIdMandatory()
This method can be used to query if the identifier of this
NamedSBase is required to be defined (i.e., not null )
in the definition of SBML. |
boolean |
isSetDelay() |
boolean |
isSetListOfEventAssignments() |
boolean |
isSetPriority() |
boolean |
isSetTimeUnits()
Deprecated.
|
boolean |
isSetTimeUnitsInstance()
Deprecated.
|
boolean |
isSetTrigger() |
boolean |
isSetUnits()
Deprecated.
|
boolean |
isSetUnitsInstance()
Deprecated.
|
boolean |
isSetUseValuesFromTriggerTime() |
boolean |
isUseValuesFromTriggerTime() |
boolean |
readAttribute(java.lang.String attributeName,
java.lang.String prefix,
java.lang.String value)
If the attribute is an id or name attribute, it will set the id or name
of this object with the value of the XML attribute ('value').
|
EventAssignment |
removeEventAssignment(int i) |
EventAssignment |
removeEventAssignment(java.lang.String id) |
void |
setDelay(Delay delay)
Sets the delay of this Event to 'delay'.
|
void |
setListOfEventAssignments(ListOf<EventAssignment> listOfEventAssignments)
Sets the
listOfEventAssignments of this Event to
'listOfEventAssignments'. |
void |
setPriority(Priority priority) |
void |
setTimeUnits(java.lang.String timeUnits)
Deprecated.
This is only applicable for SBML Level 2, Versions 1 and 2.
|
void |
setTimeUnits(UnitDefinition timeUnits)
Deprecated.
|
void |
setTimeUnitsID(java.lang.String timeUnitsID)
Deprecated.
|
void |
setTrigger(Trigger trigger)
Sets the trigger of this Event to 'trigger'.
|
void |
setUnits(java.lang.String timeUnits)
Deprecated.
|
void |
setUnits(Unit.Kind timeUnitKind)
Deprecated.
|
void |
setUnits(Unit timeUnit)
Deprecated.
|
void |
setUnits(UnitDefinition timeUnits)
Deprecated.
|
void |
setUseValuesFromTriggerTime(boolean useValuesFromTriggerTime)
Sets the useValuesFromTriggerTime of this
Event to
'useValuesFromTriggerTime'. |
boolean |
unsetDelay()
Sets the delay of this
Event to null . |
boolean |
unsetListOfEventAssignments()
Removes the
listOfEventAssignments from this Model and
notifies all registered instances of TreeNodeChangeListener . |
boolean |
unsetPriority()
|
void |
unsetTimeUnits()
Sets the timeUnitsID of this
Event to null . |
boolean |
unsetTrigger()
Sets the trigger of this
Event to null and notifies
TreeNodeChangeListener s. |
void |
unsetUseValuesFromTriggerTime()
Sets the useValuesFromTriggerTime of this Event to
null . |
java.util.Map<java.lang.String,java.lang.String> |
writeXMLAttributes() |
isPredefinedUnitsID, unsetUnits
checkIdentifier, getId, getName, isSetId, isSetName, isValidId, setId, setName, toString, unsetId, unsetName
addCVTerm, addDeclaredNamespace, addExtension, appendNotes, appendNotes, checkLevelAndVersionCompatibility, createHistory, createPlugin, disablePackage, enablePackage, enablePackage, filterCVTerms, filterCVTerms, filterCVTerms, fireNodeRemovedEvent, getAnnotation, getAnnotationString, getCVTerm, getCVTermCount, getCVTerms, getDeclaredNamespaces, getElementName, getExtension, getExtensionPackages, getHistory, getLevel, getLevelAndVersion, getMetaId, getModel, getNamespace, getNotes, getNotesString, getNumCVTerms, getNumPlugins, getParentSBMLObject, getPlugin, getSBMLDocument, getSBOTerm, getSBOTermID, getVersion, hasValidAnnotation, hasValidLevelVersionNamespaceCombination, isExtendedByOtherPackages, isPackageEnabled, isPackageURIEnabled, isPkgEnabled, isPkgURIEnabled, isSetAnnotation, isSetHistory, isSetLevel, isSetLevelAndVersion, isSetMetaId, isSetNotes, isSetParentSBMLObject, isSetPlugin, isSetSBOTerm, isSetVersion, isValidLevelAndVersionCombination, isValidMetaId, notifyChildChange, registerChild, setAnnotation, setHistory, setLevel, setLevelAndVersion, setMetaId, setNamespace, setNotes, setNotes, setParentSBML, setParentSBMLObject, setSBOTerm, setSBOTerm, setThisAsParentSBMLObject, setVersion, unregister, unsetAnnotation, unsetCVTerms, unsetExtension, unsetHistory, unsetMetaId, unsetNamespace, unsetNotes, unsetPlugin, unsetSBOTerm
addAllChangeListeners, addTreeNodeChangeListener, addTreeNodeChangeListener, children, clearUserObjects, containsUserObjectKey, filter, filter, filter, fireNodeAddedEvent, firePropertyChange, getIndex, getListOfTreeNodeChangeListeners, getNumChildren, getRoot, getTreeNodeChangeListenerCount, getUserObject, indexOf, isLeaf, isRoot, isSetParent, isSetUserObjects, putUserObject, removeAllTreeNodeChangeListeners, removeFromParent, removeTreeNodeChangeListener, removeTreeNodeChangeListener, removeUserObject, setParent, userObjectKeySet
finalize, getClass, notify, notifyAll, wait, wait, wait
getId, getName, isSetId, isSetName, setId, setName, unsetId, unsetName
addCVTerm, addDeclaredNamespace, addExtension, appendNotes, appendNotes, createPlugin, disablePackage, enablePackage, enablePackage, filterCVTerms, filterCVTerms, filterCVTerms, getAnnotation, getAnnotationString, getCVTerm, getCVTermCount, getCVTerms, getDeclaredNamespaces, getElementName, getExtension, getExtensionPackages, getHistory, getLevel, getLevelAndVersion, getMetaId, getModel, getNamespace, getNotes, getNotesString, getNumCVTerms, getNumPlugins, getParentSBMLObject, getPlugin, getSBMLDocument, getSBOTerm, getSBOTermID, getVersion, hasValidAnnotation, hasValidLevelVersionNamespaceCombination, isExtendedByOtherPackages, isPackageEnabled, isPackageURIEnabled, isPkgEnabled, isPkgURIEnabled, isSetAnnotation, isSetHistory, isSetLevel, isSetLevelAndVersion, isSetMetaId, isSetNotes, isSetParentSBMLObject, isSetPlugin, isSetSBOTerm, isSetVersion, registerChild, removeTreeNodeChangeListener, setAnnotation, setHistory, setLevel, setMetaId, setNotes, setNotes, setSBOTerm, setSBOTerm, setThisAsParentSBMLObject, setVersion, unregister, unsetAnnotation, unsetCVTerms, unsetExtension, unsetHistory, unsetMetaId, unsetNotes, unsetPlugin, unsetSBOTerm
addAllChangeListeners, addTreeNodeChangeListener, addTreeNodeChangeListener, clearUserObjects, containsUserObjectKey, filter, filter, filter, fireNodeAddedEvent, fireNodeRemovedEvent, firePropertyChange, getListOfTreeNodeChangeListeners, getRoot, getTreeNodeChangeListenerCount, getUserObject, isRoot, isSetParent, isSetUserObjects, putUserObject, removeAllTreeNodeChangeListeners, removeFromParent, removeTreeNodeChangeListener, removeUserObject, userObjectKeySet
private static final long serialVersionUID
private Delay delay
private boolean isSetUseValuesFromTriggerTime
private ListOf<EventAssignment> listOfEventAssignments
private Priority priority
private Trigger trigger
private java.lang.Boolean useValuesFromTriggerTime
public Event()
null
.public Event(Event event)
event
- public Event(int level, int version)
listOfEventAssignments
and timeUnitsID are null
.level
- version
- public Event(java.lang.String id)
id
- public Event(java.lang.String id, int level, int version)
null
.id
- level
- version
- public Event(java.lang.String id, java.lang.String name, int level, int version)
null
.id
- name
- level
- version
- public boolean addEventAssignment(EventAssignment eventass)
eventass
- true
if the listOfEventAssignments
was
changed as a result of this call.public void clearListOfEventAssignments()
public Event clone()
SBase
SBase
with the same properties
like this one.clone
in interface SBase
clone
in class AbstractNamedSBaseWithUnit
@Deprecated public boolean containsUndeclaredUnits()
SBaseWithDerivedUnit
true
or false
depending on whether this
SBaseWithDerivedUnit
refers to elements such as parameters or
numbers with undeclared units.
A return value of true indicates that the UnitDefinition
returned by SBaseWithDerivedUnit.getDerivedUnitDefinition()
may not accurately
represent the units of the expression.containsUndeclaredUnits
in interface SBaseWithDerivedUnit
containsUndeclaredUnits
in class AbstractNamedSBaseWithUnit
true
if the math expression of this SBaseWithDerivedUnit
includes parameters/numbers with undeclared units,
false
otherwise.public Delay createDelay()
public EventAssignment createEventAssignment()
public EventAssignment createEventAssignment(java.lang.String variable, ASTNode math)
variable
- math
- public EventAssignment createEventAssignment(Variable variable, ASTNode math)
variable
- math
- public Trigger createTrigger()
public Trigger createTrigger(boolean initialValue, boolean persistent)
initialValue
- persistent
- public Trigger createTrigger(boolean initialValue, boolean persistent, ASTNode math)
initialValue
- persistent
- math
- public boolean equals(java.lang.Object object)
SBase
true
if and only if the given SBase
has exactly the same
properties like this SBase
instance.equals
in interface SBase
equals
in class AbstractNamedSBaseWithUnit
true
if and only if the given Object
is an instance of
SBase
that has exactly the same properties like this
SBase instance.public boolean getAllowsChildren()
getAllowsChildren
in interface javax.swing.tree.TreeNode
getAllowsChildren
in class AbstractSBase
public javax.swing.tree.TreeNode getChildAt(int index)
getChildAt
in interface javax.swing.tree.TreeNode
getChildAt
in class AbstractSBase
public int getChildCount()
getChildCount
in interface javax.swing.tree.TreeNode
getChildCount
in class AbstractSBase
public Delay getDelay()
@Deprecated public UnitDefinition getDerivedUnitDefinition()
SBaseWithDerivedUnit
UnitDefinition
within the corresponding Model
.
If no equivalent unit definition can be found, a new unit definition will
be created that is not part of the model but represents the unit of this
quantity. If it is not possible to derive a unit for this quantity, null
will be returned.getDerivedUnitDefinition
in interface SBaseWithDerivedUnit
getDerivedUnitDefinition
in class AbstractNamedSBaseWithUnit
@Deprecated public java.lang.String getDerivedUnits()
SBaseWithDerivedUnit
Unit.Kind
this
method will return the String
representation of this
Unit.Kind
.getDerivedUnits
in interface SBaseWithDerivedUnit
getDerivedUnits
in class AbstractNamedSBaseWithUnit
public EventAssignment getEventAssignment(int n)
n
- public ListOf<EventAssignment> getListOfEventAssignments()
public int getNumEventAssignments()
public int getEventAssignmentCount()
public ListOf<Event> getParent()
AbstractSBase
AbstractSBase.getParentSBMLObject()
, but this
method is needed for TreeNode
.getParent
in interface javax.swing.tree.TreeNode
getParent
in class AbstractSBase
AbstractSBase.getParentSBMLObject()
public java.lang.String getPredefinedUnitID()
AbstractNamedSBaseWithUnit
getPredefinedUnitID
in class AbstractNamedSBaseWithUnit
Model
. This can
be one of the predefined unit identifiers if there are any.public Priority getPriority()
@Deprecated public java.lang.String getTimeUnits()
@Deprecated public java.lang.String getTimeUnitsID()
@Deprecated public UnitDefinition getTimeUnitsInstance()
UnitDefinition
instance of the model which matches
the timesUnitsID of this Event
. Returns null
if there is
no UnitDefinition
id which matches the
#timeUnitsID
of this Event
.public Trigger getTrigger()
@Deprecated public java.lang.String getUnits()
getUnits
in interface SBaseWithUnit
getUnits
in class AbstractNamedSBaseWithUnit
SBaseWithUnit
. The empty
String
if it is not set.@Deprecated public UnitDefinition getUnitsInstance()
getUnitsInstance
in interface SBaseWithUnit
getUnitsInstance
in class AbstractNamedSBaseWithUnit
#unitsID
of
this SBaseWithUnit
as id. Null if it doesn't
exist. In case that the unit of this SBaseWithUnit
represents a base Unit
, a new UnitDefinition
will
be created and returned by this method. This new
UnitDefinition
will only contain the one unit represented
by the unit identifier in this SBaseWithUnit
. Note
that the corresponding model will not contain this
UnitDefinition
. The identifier of this new
UnitDefinition
will be set to the same value as the name
of the base Unit
.public boolean getUseValuesFromTriggerTime()
public int hashCode()
hashCode
in interface SBase
hashCode
in class AbstractNamedSBaseWithUnit
Object.hashCode()
public void initDefaults()
public void initDefaults(int level, int version)
Event
.public boolean isIdMandatory()
NamedSBase
NamedSBase
is required to be defined (i.e., not null
)
in the definition of SBML.isIdMandatory
in interface NamedSBase
true
if the identifier of this element must be set in
order to create a valid SBML representation. false
otherwise, i.e., if the identifier can be understood as an optional
attribute.public boolean isSetDelay()
true
if the delay of this Event is not null
.public boolean isSetListOfEventAssignments()
true
if the listOfEventAssignments of this Event is not
null
and not empty;public boolean isSetPriority()
@Deprecated public boolean isSetTimeUnits()
true
if the timeUnitsID of this Event
is not null
.@Deprecated public boolean isSetTimeUnitsInstance()
true
if the UnitDefinition which has the timeUnitsID of this
Event as id is not null
.public boolean isSetTrigger()
true
if the trigger of this Event is not null
.@Deprecated public boolean isSetUnits()
isSetUnits
in interface SBaseWithUnit
isSetUnits
in class AbstractNamedSBaseWithUnit
true
if the unitsID of this element is not null
.@Deprecated public boolean isSetUnitsInstance()
SBaseWithUnit
unitsID
attribute of this SBaseWithUnit
is either an existing base
Unit
, i.e., a simple Unit
that can directly be addressed
via its Unit.Kind
element, or the identifier of an existing
UnitDefinition
in the Model
to which this
SBaseWithUnit
belongs.isSetUnitsInstance
in interface SBaseWithUnit
isSetUnitsInstance
in class AbstractNamedSBaseWithUnit
true
if either a UnitDefinition
, which has the
unitsID
of this SBaseWithUnit
, can be
found in the Model
to which this
SBaseWithUnit
belongs, or if this element's
unitsID
as a corresponding base Unit
for the
given Level/Version combination.public boolean isSetUseValuesFromTriggerTime()
true
is the useValuesFromTriggerTime of this Event is not null
.public boolean isUseValuesFromTriggerTime()
Event
if it has been set, false
otherwise.public boolean readAttribute(java.lang.String attributeName, java.lang.String prefix, java.lang.String value)
SBase
readAttribute
in interface SBase
readAttribute
in class AbstractNamedSBase
attributeName
- localName of the XML attributeprefix
- prefix of the XML attributevalue
- value of the XML attributetrue
if the attribute has been successfully read.public EventAssignment removeEventAssignment(int i)
i
- public EventAssignment removeEventAssignment(java.lang.String id)
id
- public void setDelay(Delay delay)
delay
- public void setListOfEventAssignments(ListOf<EventAssignment> listOfEventAssignments)
listOfEventAssignments
of this Event
to
'listOfEventAssignments'. It automatically sets the SBMLParent object of
the listOfEventAssignments and all the EventAssignment
s in this list to
this Event
instance.listOfEventAssignments
- public void setPriority(Priority priority)
priority
- the priority to setPropertyNotAvailableException
- if Level < 3.@Deprecated public void setTimeUnits(java.lang.String timeUnits)
Event
to 'timeUnits'.timeUnits
- @Deprecated public void setTimeUnits(UnitDefinition timeUnits)
Event
to the id of the UnitDefinition
'timeUnits'.timeUnits
- @Deprecated public void setTimeUnitsID(java.lang.String timeUnitsID)
timeUnitsID
- the timeUnitsID to setpublic void setTrigger(Trigger trigger)
Trigger
parentSBML object to this Event instance.trigger
- @Deprecated public void setUnits(Unit.Kind timeUnitKind)
SBaseWithUnit
SBaseWithUnit
.
A new unit will be created base on this kind.setUnits
in interface SBaseWithUnit
setUnits
in class AbstractNamedSBaseWithUnit
@Deprecated public void setUnits(java.lang.String timeUnits)
SBaseWithUnit
SBaseWithUnit
. Only valid unit
kind names or identifiers of already existing UnitDefinition
s are
allowed arguments of this function.setUnits
in interface SBaseWithUnit
setUnits
in class AbstractNamedSBaseWithUnit
timeUnits
- the identifier of an already existing UnitDefinition
or an Unit.Kind
identifier for the current
level/version combination of this unit. Passing a null value
to this method is equivalent to calling SBaseWithUnit.unsetUnits()
.@Deprecated public void setUnits(Unit timeUnit)
SBaseWithUnit
Unit
of this SBaseWithUnit
.setUnits
in interface SBaseWithUnit
setUnits
in class AbstractNamedSBaseWithUnit
@Deprecated public void setUnits(UnitDefinition timeUnits)
SBaseWithUnit
SBaseWithUnit
to the given
unit definition.setUnits
in interface SBaseWithUnit
setUnits
in class AbstractNamedSBaseWithUnit
public void setUseValuesFromTriggerTime(boolean useValuesFromTriggerTime)
Event
to
'useValuesFromTriggerTime'.useValuesFromTriggerTime
- PropertyNotAvailableException
- if the Level/Version combination is lower than 2.4.public boolean unsetDelay()
Event
to null
.public boolean unsetListOfEventAssignments()
listOfEventAssignments
from this Model
and
notifies all registered instances of TreeNodeChangeListener
.true
if calling this method lead to a change in this
data structure.public boolean unsetPriority()
public void unsetTimeUnits()
Event
to null
.public boolean unsetTrigger()
Event
to null and notifies
TreeNodeChangeListener
s.public void unsetUseValuesFromTriggerTime()
null
.public java.util.Map<java.lang.String,java.lang.String> writeXMLAttributes()
writeXMLAttributes
in interface SBase
writeXMLAttributes
in class AbstractNamedSBase
Map
containing the XML attributes of this object.