org.sbml.jsbml.ext.arrays.validator.constraints

Class ArraysMathCheck

java.lang.Object

org.sbml.jsbml.ext.arrays.validator.constraints.ArraysConstraint

org.sbml.jsbml.ext.arrays.validator.constraints.ArraysMathCheck

public class ArraysMathCheck
extends ArraysConstraint

Since:

1.0

Version:

$Rev: 1899 $

Author:

Leandro Watanabe

Field Summary

Fields

Modifier and Type	Field and Description
private MathContainer	mathContainer

Fields inherited from class org.sbml.jsbml.ext.arrays.validator.constraints.ArraysConstraint

listOfErrors, model

Constructor Summary

Constructors

Constructor and Description
ArraysMathCheck(Model model, MathContainer mathContainer)

Method Summary

Methods

Modifier and Type	Method and Description
void	check() This function is used to check if the given model doesn't violate the constraint specified by this object.
private void	checkSelector(ASTNode math)
private void	getSelectorNodes(ASTNode math, java.util.List<ASTNode> listOfNodes) Recursively checks if a node is of type FUNCTION_SELECTOR.
private java.util.List<ASTNode>	getSelectorNodes(MathContainer mathContainer) Get all the selector ASTNodes in the given math.
private void	logMathVectorIrregular(java.lang.String shortMsg) Log an error indicating that the first argument of the selector math is invalid.
private void	logSelectorInconsistency(java.lang.String shortMsg) Log an error indicating that the first argument of the selector math is invalid.
private void	logVectorInconsistency(java.lang.String shortMsg) Log an error to indicate that the vector is not regular.

Methods inherited from class org.sbml.jsbml.ext.arrays.validator.constraints.ArraysConstraint

getListOfErrors, logFailure

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Detail

mathContainer

private final MathContainer mathContainer

Constructor Detail

ArraysMathCheck

public ArraysMathCheck(Model model,
               MathContainer mathContainer)

Method Detail

check

public void check()

Description copied from class: ArraysConstraint

This function is used to check if the given model doesn't violate the constraint specified by this object.

Specified by:

check in class ArraysConstraint

checkSelector

private void checkSelector(ASTNode math)

getSelectorNodes

private java.util.List<ASTNode> getSelectorNodes(MathContainer mathContainer)

Get all the selector ASTNodes in the given math.

Parameters:

math -

Returns:

getSelectorNodes

private void getSelectorNodes(ASTNode math,
                    java.util.List<ASTNode> listOfNodes)

Recursively checks if a node is of type FUNCTION_SELECTOR. If so, add to the list of selector nodes.

Parameters:

math -

listOfNodes -

logMathVectorIrregular

private void logMathVectorIrregular(java.lang.String shortMsg)

Log an error indicating that the first argument of the selector math is invalid.

Parameters:

shortMsg -

logVectorInconsistency

private void logVectorInconsistency(java.lang.String shortMsg)

Log an error to indicate that the vector is not regular.

Parameters:

shortMsg -

logSelectorInconsistency

private void logSelectorInconsistency(java.lang.String shortMsg)

Log an error indicating that the first argument of the selector math is invalid.

Parameters:

shortMsg -