org.sbml.jsbml.xml.test

Class CVTermTests

java.lang.Object

org.sbml.jsbml.xml.test.CVTermTests

public class CVTermTests
extends java.lang.Object

Tests the CVTerm class.

Since:

1.0

Version:

$Rev: 1763 $

Author:

Nicolas Rodriguez

Field Summary

Fields

Modifier and Type	Field and Description
private Compartment	compartment
private CVTerm	cvterm
private SBMLDocument	doc
private static java.lang.String	HTTP_IDENTIFIERS_ORG_GO_GO_1222222
private static java.lang.String	HTTP_IDENTIFIERS_ORG_GO_GO_1234567
private static java.lang.String	HTTP_IDENTIFIERS_ORG_TAXONOMY_9606
private Model	model
private static java.lang.String	TEST_MODEL_NAME

Constructor Summary

Constructors

Constructor and Description
CVTermTests()

Field Detail

HTTP_IDENTIFIERS_ORG_TAXONOMY_9606

private static final java.lang.String HTTP_IDENTIFIERS_ORG_TAXONOMY_9606

See Also:

Constant Field Values

HTTP_IDENTIFIERS_ORG_GO_GO_1222222

private static final java.lang.String HTTP_IDENTIFIERS_ORG_GO_GO_1222222

See Also:

Constant Field Values

HTTP_IDENTIFIERS_ORG_GO_GO_1234567

private static final java.lang.String HTTP_IDENTIFIERS_ORG_GO_GO_1234567

See Also:

Constant Field Values

TEST_MODEL_NAME

private static final java.lang.String TEST_MODEL_NAME

See Also:

Constant Field Values

doc

private SBMLDocument doc

model

private Model model

compartment

private Compartment compartment

cvterm

private CVTerm cvterm

Constructor Detail

CVTermTests

public CVTermTests()

Method Detail

initialSetUp

setUp

cvTermTest1

cvTermTest2

Writes an SBMLDocument to a String then reads it back and checks that the CVTerms are the same. Tests as well the CVTerm.removeFromParent() method.

removeCVTermByIndexTest

Tests the SBase.removeCVTerm(int) method.

removeCVTermByCVTermTest

Tests the SBase.removeCVTerm(CVTerm) method.

indexOutOfBoundsExceptionTest

Tests if an IndexOutOfBoundsException is properly thrown when an index is passed to the CVTerm related methods on SBase.

See Also:

SBase.getCVTerm(int), SBase.removeCVTerm(int)

testFilterResources

Throws:

java.lang.Exception

testFilterResourcesDoesNotReturnDuplicates

Throws:

java.lang.Exception