| addCompartment(Compartment c) | libsbmlcs.Model | |
| addCompartmentType(CompartmentType ct) | libsbmlcs.Model | |
| addConstantAttribute() | libsbmlcs.Model | |
| addConstraint(Constraint c) | libsbmlcs.Model | |
| addCVTerm(CVTerm term, bool newBag) | libsbmlcs.SBase | |
| addCVTerm(CVTerm term) | libsbmlcs.SBase | |
| addDefinitionsForDefaultUnits() | libsbmlcs.Model | |
| addEvent(Event e) | libsbmlcs.Model | |
| addFunctionDefinition(FunctionDefinition fd) | libsbmlcs.Model | |
| addInitialAssignment(InitialAssignment ia) | libsbmlcs.Model | |
| addModifiers() | libsbmlcs.Model | |
| addParameter(Parameter p) | libsbmlcs.Model | |
| addReaction(Reaction r) | libsbmlcs.Model | |
| addRule(Rule r) | libsbmlcs.Model | |
| addSpecies(Species s) | libsbmlcs.Model | |
| addSpeciesType(SpeciesType st) | libsbmlcs.Model | |
| addUnitDefinition(UnitDefinition ud) | libsbmlcs.Model | |
| appendAnnotation(XMLNode annotation) | libsbmlcs.Model | |
| appendAnnotation(string annotation) | libsbmlcs.Model | |
| appendFrom(Model model) | libsbmlcs.Model | |
| appendNotes(XMLNode notes) | libsbmlcs.SBase | |
| appendNotes(string notes) | libsbmlcs.SBase | |
| assignRequiredValues() | libsbmlcs.Model | |
| checkCompatibility(SBase arg0) | libsbmlcs.SBase | |
| checkMathMLNamespace(XMLToken elem) | libsbmlcs.SBase | |
| clearAllElementIdList() | libsbmlcs.Model | |
| clearAllElementMetaIdList() | libsbmlcs.Model | |
| clone() | libsbmlcs.ModelDefinition | |
| connectToChild() | libsbmlcs.Model | virtual |
| convertFromL3V2(bool strict) | libsbmlcs.Model | |
| convertFromL3V2() | libsbmlcs.Model | |
| convertL1ToL2() | libsbmlcs.Model | |
| convertL1ToL3(bool addDefaultUnits) | libsbmlcs.Model | |
| convertL1ToL3() | libsbmlcs.Model | |
| convertL2ToL1(bool strict) | libsbmlcs.Model | |
| convertL2ToL1() | libsbmlcs.Model | |
| convertL2ToL3(bool strict, bool addDefaultUnits) | libsbmlcs.Model | |
| convertL2ToL3(bool strict) | libsbmlcs.Model | |
| convertL2ToL3() | libsbmlcs.Model | |
| convertL3ToL1(bool strict) | libsbmlcs.Model | |
| convertL3ToL1() | libsbmlcs.Model | |
| convertL3ToL2(bool strict) | libsbmlcs.Model | |
| convertL3ToL2() | libsbmlcs.Model | |
| convertParametersToLocals(long level, long version) | libsbmlcs.Model | |
| convertStoichiometryMath() | libsbmlcs.Model | |
| createAlgebraicRule() | libsbmlcs.Model | |
| createAssignmentRule() | libsbmlcs.Model | |
| createCompartment() | libsbmlcs.Model | |
| createCompartmentType() | libsbmlcs.Model | |
| createConstraint() | libsbmlcs.Model | |
| createDelay() | libsbmlcs.Model | |
| createEvent() | libsbmlcs.Model | |
| createEventAssignment() | libsbmlcs.Model | |
| createFunctionDefinition() | libsbmlcs.Model | |
| createInitialAssignment() | libsbmlcs.Model | |
| createKineticLaw() | libsbmlcs.Model | |
| createKineticLawLocalParameter() | libsbmlcs.Model | |
| createKineticLawParameter() | libsbmlcs.Model | |
| createModifier() | libsbmlcs.Model | |
| createParameter() | libsbmlcs.Model | |
| createProduct() | libsbmlcs.Model | |
| createRateRule() | libsbmlcs.Model | |
| createReactant() | libsbmlcs.Model | |
| createReaction() | libsbmlcs.Model | |
| createSpecies() | libsbmlcs.Model | |
| createSpeciesType() | libsbmlcs.Model | |
| createTrigger() | libsbmlcs.Model | |
| createUnit() | libsbmlcs.Model | |
| createUnitDefinition() | libsbmlcs.Model | |
| dealWithDefaultValues() | libsbmlcs.Model | |
| dealWithEvents(bool strict) | libsbmlcs.Model | |
| dealWithFast() | libsbmlcs.Model | |
| dealWithL3Fast(long targetVersion) | libsbmlcs.Model | |
| dealWithModelUnits(bool strict) | libsbmlcs.Model | |
| dealWithModelUnits() | libsbmlcs.Model | |
| dealWithStoichiometry() | libsbmlcs.Model | |
| deleteDisabledPlugins(bool recursive) | libsbmlcs.SBase | |
| deleteDisabledPlugins() | libsbmlcs.SBase | |
| disablePackage(string pkgURI, string pkgPrefix) | libsbmlcs.SBase | |
| Dispose() | libsbmlcs.ModelDefinition | virtual |
| enablePackage(string pkgURI, string pkgPrefix, bool flag) | libsbmlcs.SBase | |
| Equals(Object sb) | libsbmlcs.SBase | |
| getAllElementIdList() | libsbmlcs.Model | |
| getAllElementMetaIdList() | libsbmlcs.Model | |
| getAncestorOfType(int type, string pkgName) | libsbmlcs.SBase | |
| getAncestorOfType(int type) | libsbmlcs.SBase | |
| getAnnotation() | libsbmlcs.SBase | |
| getAnnotationString() | libsbmlcs.SBase | |
| getAreaUnits() | libsbmlcs.Model | |
| getAssignmentRule(string variable) | libsbmlcs.Model | |
| getAssignmentRuleByVariable(string variable) | libsbmlcs.Model | |
| getColumn() | libsbmlcs.SBase | |
| getCompartment(long n) | libsbmlcs.Model | |
| getCompartment(string sid) | libsbmlcs.Model | |
| getCompartmentType(long n) | libsbmlcs.Model | |
| getCompartmentType(string sid) | libsbmlcs.Model | |
| getConstraint(long n) | libsbmlcs.Model | |
| getConversionFactor() | libsbmlcs.Model | |
| getCVTerm(long n) | libsbmlcs.SBase | |
| getCVTerms() | libsbmlcs.SBase | |
| getDisabledPlugin(long n) | libsbmlcs.SBase | |
| getElementByMetaId(string metaid) | libsbmlcs.Model | |
| getElementBySId(string id) | libsbmlcs.Model | |
| getElementName() | libsbmlcs.ModelDefinition | |
| getEvent(long n) | libsbmlcs.Model | |
| getEvent(string sid) | libsbmlcs.Model | |
| getExtentUnits() | libsbmlcs.Model | |
| getFormulaUnitsDataForAssignment(string sid) | libsbmlcs.Model | |
| getFormulaUnitsDataForVariable(string sid) | libsbmlcs.Model | |
| getFunctionDefinition(long n) | libsbmlcs.Model | |
| getFunctionDefinition(string sid) | libsbmlcs.Model | |
| GetHashCode() | libsbmlcs.SBase | |
| getId() | libsbmlcs.Model | |
| getIdAttribute() | libsbmlcs.SBase | |
| getInitialAssignment(long n) | libsbmlcs.Model | |
| getInitialAssignment(string symbol) | libsbmlcs.Model | |
| getInitialAssignmentBySymbol(string symbol) | libsbmlcs.Model | |
| getLengthUnits() | libsbmlcs.Model | |
| getLevel() | libsbmlcs.SBase | |
| getLine() | libsbmlcs.SBase | |
| getListOfAllElements(ElementFilter filter) | libsbmlcs.SBase | |
| getListOfAllElements() | libsbmlcs.SBase | |
| getListOfAllElementsFromPlugins(ElementFilter filter) | libsbmlcs.SBase | |
| getListOfAllElementsFromPlugins() | libsbmlcs.SBase | |
| getListOfCompartments() | libsbmlcs.Model | |
| getListOfCompartmentTypes() | libsbmlcs.Model | |
| getListOfConstraints() | libsbmlcs.Model | |
| getListOfEvents() | libsbmlcs.Model | |
| getListOfFunctionDefinitions() | libsbmlcs.Model | |
| getListOfInitialAssignments() | libsbmlcs.Model | |
| getListOfParameters() | libsbmlcs.Model | |
| getListOfReactions() | libsbmlcs.Model | |
| getListOfRules() | libsbmlcs.Model | |
| getListOfSpecies() | libsbmlcs.Model | |
| getListOfSpeciesTypes() | libsbmlcs.Model | |
| getListOfUnitDefinitions() | libsbmlcs.Model | |
| getMetaId() | libsbmlcs.SBase | |
| getModel() | libsbmlcs.SBase | |
| getModelHistory() | libsbmlcs.SBase | |
| getModifierSpeciesReference(string sid) | libsbmlcs.Model | |
| getName() | libsbmlcs.Model | |
| getNamespaces() | libsbmlcs.SBase | |
| getNotes() | libsbmlcs.SBase | |
| getNotesString() | libsbmlcs.SBase | |
| getNumCompartments() | libsbmlcs.Model | |
| getNumCompartmentTypes() | libsbmlcs.Model | |
| getNumConstraints() | libsbmlcs.Model | |
| getNumCVTerms() | libsbmlcs.SBase | |
| getNumDisabledPlugins() | libsbmlcs.SBase | |
| getNumEvents() | libsbmlcs.Model | |
| getNumFunctionDefinitions() | libsbmlcs.Model | |
| getNumInitialAssignments() | libsbmlcs.Model | |
| getNumParameters() | libsbmlcs.Model | |
| getNumPlugins() | libsbmlcs.SBase | |
| getNumReactions() | libsbmlcs.Model | |
| getNumRules() | libsbmlcs.Model | |
| getNumSpecies() | libsbmlcs.Model | |
| getNumSpeciesTypes() | libsbmlcs.Model | |
| getNumSpeciesWithBoundaryCondition() | libsbmlcs.Model | |
| getNumUnitDefinitions() | libsbmlcs.Model | |
| getPackageCoreVersion() | libsbmlcs.SBase | |
| getPackageName() | libsbmlcs.SBase | |
| getPackageVersion() | libsbmlcs.SBase | |
| getParameter(long n) | libsbmlcs.Model | |
| getParameter(string sid) | libsbmlcs.Model | |
| getParentSBMLObject() | libsbmlcs.SBase | |
| getPlugin(string package) | libsbmlcs.SBase | |
| getPlugin(long n) | libsbmlcs.SBase | |
| getPrefix() | libsbmlcs.SBase | |
| getRateRule(string variable) | libsbmlcs.Model | |
| getRateRuleByVariable(string variable) | libsbmlcs.Model | |
| getReaction(long n) | libsbmlcs.Model | |
| getReaction(string sid) | libsbmlcs.Model | |
| getResourceBiologicalQualifier(string resource) | libsbmlcs.SBase | |
| getResourceModelQualifier(string resource) | libsbmlcs.SBase | |
| getRule(long n) | libsbmlcs.Model | |
| getRule(string variable) | libsbmlcs.Model | |
| getRuleByVariable(string variable) | libsbmlcs.Model | |
| getSBMLDocument() | libsbmlcs.SBase | |
| getSBOTerm() | libsbmlcs.SBase | |
| getSBOTermAsURL() | libsbmlcs.SBase | |
| getSBOTermID() | libsbmlcs.SBase | |
| getSpecies(long n) | libsbmlcs.Model | |
| getSpecies(string sid) | libsbmlcs.Model | |
| getSpeciesReference(string sid) | libsbmlcs.Model | |
| getSpeciesType(long n) | libsbmlcs.Model | |
| getSpeciesType(string sid) | libsbmlcs.Model | |
| getSubstanceUnits() | libsbmlcs.Model | |
| getTimeUnits() | libsbmlcs.Model | |
| getTypeCode() | libsbmlcs.ModelDefinition | |
| getUnitDefinition(long n) | libsbmlcs.Model | |
| getUnitDefinition(string sid) | libsbmlcs.Model | |
| getURI() | libsbmlcs.SBase | |
| getVersion() | libsbmlcs.SBase | |
| getVolumeUnits() | libsbmlcs.Model | |
| hasRequiredElements() | libsbmlcs.Model | |
| hasValidLevelVersionNamespaceCombination() | libsbmlcs.SBase | |
| isPackageEnabled(string pkgName) | libsbmlcs.SBase | |
| isPackageURIEnabled(string pkgURI) | libsbmlcs.SBase | |
| isPkgEnabled(string pkgName) | libsbmlcs.SBase | |
| isPkgURIEnabled(string pkgURI) | libsbmlcs.SBase | |
| isPopulatedAllElementIdList() | libsbmlcs.Model | |
| isPopulatedAllElementMetaIdList() | libsbmlcs.Model | |
| isPopulatedListFormulaUnitsData() | libsbmlcs.Model | |
| isSetAnnotation() | libsbmlcs.SBase | |
| isSetAreaUnits() | libsbmlcs.Model | |
| isSetConversionFactor() | libsbmlcs.Model | |
| isSetExtentUnits() | libsbmlcs.Model | |
| isSetId() | libsbmlcs.Model | |
| isSetIdAttribute() | libsbmlcs.SBase | |
| isSetLengthUnits() | libsbmlcs.Model | |
| isSetMetaId() | libsbmlcs.SBase | |
| isSetModelHistory() | libsbmlcs.SBase | |
| isSetName() | libsbmlcs.Model | |
| isSetNotes() | libsbmlcs.SBase | |
| isSetSBOTerm() | libsbmlcs.SBase | |
| isSetSubstanceUnits() | libsbmlcs.Model | |
| isSetTimeUnits() | libsbmlcs.Model | |
| isSetUserData() | libsbmlcs.SBase | |
| isSetVolumeUnits() | libsbmlcs.Model | |
| matchesRequiredSBMLNamespacesForAddition(SBase sb) | libsbmlcs.SBase | |
| matchesSBMLNamespaces(SBase sb) | libsbmlcs.SBase | |
| Model(long level, long version) | libsbmlcs.Model | |
| Model(SBMLNamespaces sbmlns) | libsbmlcs.Model | |
| Model(Model orig) | libsbmlcs.Model | |
| ModelDefinition(long level, long version, long pkgVersion) | libsbmlcs.ModelDefinition | |
| ModelDefinition(long level, long version) | libsbmlcs.ModelDefinition | |
| ModelDefinition(long level) | libsbmlcs.ModelDefinition | |
| ModelDefinition() | libsbmlcs.ModelDefinition | |
| ModelDefinition(CompPkgNamespaces compns) | libsbmlcs.ModelDefinition | |
| ModelDefinition(Model source) | libsbmlcs.ModelDefinition | |
| operator!=(SBase lhs, SBase rhs) | libsbmlcs.SBase | static |
| operator==(SBase lhs, SBase rhs) | libsbmlcs.SBase | static |
| populateAllElementIdList() | libsbmlcs.Model | |
| populateAllElementMetaIdList() | libsbmlcs.Model | |
| populateListFormulaUnitsData() | libsbmlcs.Model | |
| removeCompartment(long n) | libsbmlcs.Model | |
| removeCompartment(string sid) | libsbmlcs.Model | |
| removeCompartmentType(long n) | libsbmlcs.Model | |
| removeCompartmentType(string sid) | libsbmlcs.Model | |
| removeCompartmentTypes() | libsbmlcs.Model | |
| removeConstraint(long n) | libsbmlcs.Model | |
| removeEvent(long n) | libsbmlcs.Model | |
| removeEvent(string sid) | libsbmlcs.Model | |
| removeFromParentAndDelete() | libsbmlcs.ModelDefinition | |
| removeFunctionDefinition(long n) | libsbmlcs.Model | |
| removeFunctionDefinition(string sid) | libsbmlcs.Model | |
| removeInitialAssignment(long n) | libsbmlcs.Model | |
| removeInitialAssignment(string symbol) | libsbmlcs.Model | |
| removeParameter(long n) | libsbmlcs.Model | |
| removeParameter(string sid) | libsbmlcs.Model | |
| removeParameterRuleUnits(bool strict) | libsbmlcs.Model | |
| removeReaction(long n) | libsbmlcs.Model | |
| removeReaction(string sid) | libsbmlcs.Model | |
| removeRule(long n) | libsbmlcs.Model | |
| removeRule(string variable) | libsbmlcs.Model | |
| removeRuleByVariable(string variable) | libsbmlcs.Model | |
| removeSpecies(long n) | libsbmlcs.Model | |
| removeSpecies(string sid) | libsbmlcs.Model | |
| removeSpeciesType(long n) | libsbmlcs.Model | |
| removeSpeciesType(string sid) | libsbmlcs.Model | |
| removeSpeciesTypes() | libsbmlcs.Model | |
| removeTopLevelAnnotationElement(string elementName, string elementURI, bool removeEmpty) | libsbmlcs.SBase | |
| removeTopLevelAnnotationElement(string elementName, string elementURI) | libsbmlcs.SBase | |
| removeTopLevelAnnotationElement(string elementName) | libsbmlcs.SBase | |
| removeUnitDefinition(long n) | libsbmlcs.Model | |
| removeUnitDefinition(string sid) | libsbmlcs.Model | |
| renameIDs(SBaseList elements, IdentifierTransformer idTransformer) | libsbmlcs.Model | |
| renameMetaIdRefs(string oldid, string newid) | libsbmlcs.SBase | |
| renameSIdRefs(string oldid, string newid) | libsbmlcs.Model | |
| renameUnitSIdRefs(string oldid, string newid) | libsbmlcs.Model | |
| replaceTopLevelAnnotationElement(XMLNode annotation) | libsbmlcs.SBase | |
| replaceTopLevelAnnotationElement(string annotation) | libsbmlcs.SBase | |
| setAnnotation(XMLNode annotation) | libsbmlcs.Model | |
| setAnnotation(string annotation) | libsbmlcs.Model | |
| setAreaUnits(string units) | libsbmlcs.Model | |
| setConversionFactor(string units) | libsbmlcs.Model | |
| setExtentUnits(string units) | libsbmlcs.Model | |
| setId(string sid) | libsbmlcs.Model | |
| setIdAttribute(string sid) | libsbmlcs.SBase | |
| setLengthUnits(string units) | libsbmlcs.Model | |
| setMetaId(string metaid) | libsbmlcs.SBase | |
| setModelHistory(ModelHistory history) | libsbmlcs.SBase | |
| setName(string name) | libsbmlcs.Model | |
| setNamespaces(XMLNamespaces xmlns) | libsbmlcs.SBase | |
| setNotes(XMLNode notes) | libsbmlcs.SBase | |
| setNotes(string notes, bool addXHTMLMarkup) | libsbmlcs.SBase | |
| setNotes(string notes) | libsbmlcs.SBase | |
| setSBMLNamespacesAndOwn(SBMLNamespaces disownedNs) | libsbmlcs.SBase | |
| setSBOTerm(int value) | libsbmlcs.SBase | |
| setSBOTerm(string sboid) | libsbmlcs.SBase | |
| setSpatialDimensions(double dims) | libsbmlcs.Model | |
| setSpatialDimensions() | libsbmlcs.Model | |
| setSpeciesReferenceConstantValueAndStoichiometry() | libsbmlcs.Model | |
| setSubstanceUnits(string units) | libsbmlcs.Model | |
| setTimeUnits(string units) | libsbmlcs.Model | |
| setVolumeUnits(string units) | libsbmlcs.Model | |
| swigCMemOwn | libsbmlcs.SBase | protected |
| toSBML() | libsbmlcs.SBase | |
| toXMLNode() | libsbmlcs.SBase | |
| unsetAnnotation() | libsbmlcs.SBase | |
| unsetAreaUnits() | libsbmlcs.Model | |
| unsetConversionFactor() | libsbmlcs.Model | |
| unsetCVTerms() | libsbmlcs.SBase | |
| unsetExtentUnits() | libsbmlcs.Model | |
| unsetId() | libsbmlcs.Model | |
| unsetIdAttribute() | libsbmlcs.SBase | |
| unsetLengthUnits() | libsbmlcs.Model | |
| unsetMetaId() | libsbmlcs.SBase | |
| unsetModelHistory() | libsbmlcs.SBase | |
| unsetName() | libsbmlcs.Model | |
| unsetNotes() | libsbmlcs.SBase | |
| unsetSBOTerm() | libsbmlcs.SBase | |
| unsetSubstanceUnits() | libsbmlcs.Model | |
| unsetTimeUnits() | libsbmlcs.Model | |
| unsetUserData() | libsbmlcs.SBase | |
| unsetVolumeUnits() | libsbmlcs.Model | |
