readSBML.cs

A simple command-line program that reads an SBML file and prints some statistics about it.

/**
 * @file    readSBML.cpp
 * @brief   Similar to validateSBML, but without the validation
 * @author  Sarah Keating
 * @author  Ben Bornstein
 *
 * <!--------------------------------------------------------------------------
 * This sample program is distributed under a different license than the rest
 * of libSBML.  This program uses the open-source MIT license, as follows:
 *
 * Copyright (c) 2013-2018 by the California Institute of Technology
 * (California, USA), the European Bioinformatics Institute (EMBL-EBI, UK)
 * and the University of Heidelberg (Germany), with support from the National
 * Institutes of Health (USA) under grant R01GM070923.  All rights reserved.
 *
 * Permission is hereby granted, free of charge, to any person obtaining a
 * copy of this software and associated documentation files (the "Software"),
 * to deal in the Software without restriction, including without limitation
 * the rights to use, copy, modify, merge, publish, distribute, sublicense,
 * and/or sell copies of the Software, and to permit persons to whom the
 * Software is furnished to do so, subject to the following conditions:
 *
 * The above copyright notice and this permission notice shall be included in
 * all copies or substantial portions of the Software.
 *
 * THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
 * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
 * FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL
 * THE AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
 * LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING
 * FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER
 * DEALINGS IN THE SOFTWARE.
 *
 * Neither the name of the California Institute of Technology (Caltech), nor
 * of the European Bioinformatics Institute (EMBL-EBI), nor of the University
 * of Heidelberg, nor the names of any contributors, may be used to endorse
 * or promote products derived from this software without specific prior
 * written permission.
 * ------------------------------------------------------------------------ -->
 */


using System;
using System.Collections.Generic;
using System.IO;
using System.Text;
using libsbmlcs;

internal class ReadSBML
{
    public static int Main(string[] args)
    {
        if (args.Length != 1)
        {
            Console.WriteLine("Usage: readSBML filename");
            return 1;
        }

        string filename = args[0];
        long current = DateTime.Now.Ticks;
        SBMLDocument document = libsbml.readSBML(filename);

        int errors = (int)document.getNumErrors();

        Console.WriteLine();
        Console.WriteLine("            filename: " + filename);
        Console.WriteLine("           file size: " + new FileInfo(filename).Length);
        Console.WriteLine("      read time (ms): " + (DateTime.Now.Ticks - current));
        Console.WriteLine(" validation error(s): " + errors);
        Console.WriteLine();

        document.printErrors();

        return errors;
    }

}