| __init__(self, args) | libsbml.Model | |
| addCompartment(self, c) | libsbml.Model | |
| addCompartmentType(self, ct) | libsbml.Model | |
| addConstraint(self, c) | libsbml.Model | |
| addCVTerm(self, term, newBag=False) | libsbml.SBase | |
| addEvent(self, e) | libsbml.Model | |
| addFunctionDefinition(self, fd) | libsbml.Model | |
| addInitialAssignment(self, ia) | libsbml.Model | |
| addParameter(self, p) | libsbml.Model | |
| addReaction(self, r) | libsbml.Model | |
| addRule(self, r) | libsbml.Model | |
| addSpecies(self, s) | libsbml.Model | |
| addSpeciesType(self, st) | libsbml.Model | |
| addUnitDefinition(self, ud) | libsbml.Model | |
| appendAnnotation(self, args) | libsbml.Model | |
| appendFrom(self, model) | libsbml.Model | |
| appendNotes(self, args) | libsbml.SBase | |
| clearAllElementIdList(self) | libsbml.Model | |
| clearAllElementMetaIdList(self) | libsbml.Model | |
| clone(self) | libsbml.Model | |
| connectToChild(self) | libsbml.Model | |
| createAlgebraicRule(self) | libsbml.Model | |
| createAssignmentRule(self) | libsbml.Model | |
| createCompartment(self) | libsbml.Model | |
| createCompartmentType(self) | libsbml.Model | |
| createConstraint(self) | libsbml.Model | |
| createDelay(self) | libsbml.Model | |
| createEvent(self) | libsbml.Model | |
| createEventAssignment(self) | libsbml.Model | |
| createFunctionDefinition(self) | libsbml.Model | |
| createInitialAssignment(self) | libsbml.Model | |
| createKineticLaw(self) | libsbml.Model | |
| createKineticLawLocalParameter(self) | libsbml.Model | |
| createKineticLawParameter(self) | libsbml.Model | |
| createModifier(self) | libsbml.Model | |
| createParameter(self) | libsbml.Model | |
| createProduct(self) | libsbml.Model | |
| createRateRule(self) | libsbml.Model | |
| createReactant(self) | libsbml.Model | |
| createReaction(self) | libsbml.Model | |
| createSpecies(self) | libsbml.Model | |
| createSpeciesType(self) | libsbml.Model | |
| createTrigger(self) | libsbml.Model | |
| createUnit(self) | libsbml.Model | |
| createUnitDefinition(self) | libsbml.Model | |
| deleteDisabledPlugins(self, recursive=True) | libsbml.SBase | |
| disablePackage(self, pkgURI, pkgPrefix) | libsbml.SBase | |
| enablePackage(self, pkgURI, pkgPrefix, flag) | libsbml.SBase | |
| getAllElementIdList(self) | libsbml.Model | |
| getAllElementMetaIdList(self) | libsbml.Model | |
| getAncestorOfType(self, args) | libsbml.SBase | |
| getAnnotation(self, args) | libsbml.SBase | |
| getAnnotationString(self, args) | libsbml.SBase | |
| getAreaUnits(self) | libsbml.Model | |
| getAssignmentRule(self, args) | libsbml.Model | |
| getAssignmentRuleByVariable(self, args) | libsbml.Model | |
| getColumn(self) | libsbml.SBase | |
| getCompartment(self, args) | libsbml.Model | |
| getCompartmentType(self, args) | libsbml.Model | |
| getConstraint(self, args) | libsbml.Model | |
| getConversionFactor(self) | libsbml.Model | |
| getCVTerm(self, n) | libsbml.SBase | |
| getCVTerms(self, args) | libsbml.SBase | |
| getDisabledPlugin(self, args) | libsbml.SBase | |
| getElementByMetaId(self, metaid) | libsbml.Model | |
| getElementBySId(self, id) | libsbml.Model | |
| getElementName(self) | libsbml.Model | |
| getEvent(self, args) | libsbml.Model | |
| getExtentUnits(self) | libsbml.Model | |
| getFunctionDefinition(self, args) | libsbml.Model | |
| getId(self) | libsbml.Model | |
| getIdAttribute(self) | libsbml.SBase | |
| getInitialAssignment(self, args) | libsbml.Model | |
| getInitialAssignmentBySymbol(self, args) | libsbml.Model | |
| getLengthUnits(self) | libsbml.Model | |
| getLevel(self) | libsbml.SBase | |
| getLine(self) | libsbml.SBase | |
| getListOfAllElements(self, filter=None) | libsbml.SBase | |
| getListOfAllElementsFromPlugins(self, filter=None) | libsbml.SBase | |
| getListOfCompartments(self, args) | libsbml.Model | |
| getListOfCompartmentTypes(self, args) | libsbml.Model | |
| getListOfConstraints(self, args) | libsbml.Model | |
| getListOfEvents(self, args) | libsbml.Model | |
| getListOfFunctionDefinitions(self, args) | libsbml.Model | |
| getListOfInitialAssignments(self, args) | libsbml.Model | |
| getListOfParameters(self, args) | libsbml.Model | |
| getListOfReactions(self, args) | libsbml.Model | |
| getListOfRules(self, args) | libsbml.Model | |
| getListOfSpecies(self, args) | libsbml.Model | |
| getListOfSpeciesTypes(self, args) | libsbml.Model | |
| getListOfUnitDefinitions(self, args) | libsbml.Model | |
| getMetaId(self) | libsbml.SBase | |
| getModel(self) | libsbml.SBase | |
| getModelHistory(self, args) | libsbml.SBase | |
| getModifierSpeciesReference(self, args) | libsbml.Model | |
| getName(self) | libsbml.Model | |
| getNamespaces(self) | libsbml.SBase | |
| getNotes(self, args) | libsbml.SBase | |
| getNotesString(self, args) | libsbml.SBase | |
| getNumCompartments(self) | libsbml.Model | |
| getNumCompartmentTypes(self) | libsbml.Model | |
| getNumConstraints(self) | libsbml.Model | |
| getNumCVTerms(self) | libsbml.SBase | |
| getNumDisabledPlugins(self) | libsbml.SBase | |
| getNumEvents(self) | libsbml.Model | |
| getNumFunctionDefinitions(self) | libsbml.Model | |
| getNumInitialAssignments(self) | libsbml.Model | |
| getNumParameters(self) | libsbml.Model | |
| getNumPlugins(self) | libsbml.SBase | |
| getNumReactions(self) | libsbml.Model | |
| getNumRules(self) | libsbml.Model | |
| getNumSpecies(self) | libsbml.Model | |
| getNumSpeciesTypes(self) | libsbml.Model | |
| getNumSpeciesWithBoundaryCondition(self) | libsbml.Model | |
| getNumUnitDefinitions(self) | libsbml.Model | |
| getPackageCoreVersion(self) | libsbml.SBase | |
| getPackageName(self) | libsbml.SBase | |
| getPackageVersion(self) | libsbml.SBase | |
| getParameter(self, args) | libsbml.Model | |
| getParentSBMLObject(self, args) | libsbml.SBase | |
| getPlugin(self, args) | libsbml.SBase | |
| getPrefix(self) | libsbml.SBase | |
| getRateRule(self, args) | libsbml.Model | |
| getRateRuleByVariable(self, args) | libsbml.Model | |
| getReaction(self, args) | libsbml.Model | |
| getResourceBiologicalQualifier(self, resource) | libsbml.SBase | |
| getResourceModelQualifier(self, resource) | libsbml.SBase | |
| getRule(self, args) | libsbml.Model | |
| getRuleByVariable(self, args) | libsbml.Model | |
| getSBMLDocument(self, args) | libsbml.SBase | |
| getSBOTerm(self) | libsbml.SBase | |
| getSBOTermAsURL(self) | libsbml.SBase | |
| getSBOTermID(self) | libsbml.SBase | |
| getSpecies(self, args) | libsbml.Model | |
| getSpeciesReference(self, args) | libsbml.Model | |
| getSpeciesType(self, args) | libsbml.Model | |
| getSubstanceUnits(self) | libsbml.Model | |
| getTimeUnits(self) | libsbml.Model | |
| getTypeCode(self) | libsbml.Model | |
| getUnitDefinition(self, args) | libsbml.Model | |
| getURI(self) | libsbml.SBase | |
| getVersion(self) | libsbml.SBase | |
| getVolumeUnits(self) | libsbml.Model | |
| hasRequiredElements(self) | libsbml.Model | |
| hasValidLevelVersionNamespaceCombination(self) | libsbml.SBase | |
| isPackageEnabled(self, pkgName) | libsbml.SBase | |
| isPackageURIEnabled(self, pkgURI) | libsbml.SBase | |
| isPkgEnabled(self, pkgName) | libsbml.SBase | |
| isPkgURIEnabled(self, pkgURI) | libsbml.SBase | |
| isPopulatedAllElementIdList(self) | libsbml.Model | |
| isPopulatedAllElementMetaIdList(self) | libsbml.Model | |
| isPopulatedListFormulaUnitsData(self) | libsbml.Model | |
| isSetAnnotation(self) | libsbml.SBase | |
| isSetAreaUnits(self) | libsbml.Model | |
| isSetConversionFactor(self) | libsbml.Model | |
| isSetExtentUnits(self) | libsbml.Model | |
| isSetId(self) | libsbml.Model | |
| isSetIdAttribute(self) | libsbml.SBase | |
| isSetLengthUnits(self) | libsbml.Model | |
| isSetMetaId(self) | libsbml.SBase | |
| isSetModelHistory(self) | libsbml.SBase | |
| isSetName(self) | libsbml.Model | |
| isSetNotes(self) | libsbml.SBase | |
| isSetSBOTerm(self) | libsbml.SBase | |
| isSetSubstanceUnits(self) | libsbml.Model | |
| isSetTimeUnits(self) | libsbml.Model | |
| isSetUserData(self) | libsbml.SBase | |
| isSetVolumeUnits(self) | libsbml.Model | |
| matchesRequiredSBMLNamespacesForAddition(self, args) | libsbml.SBase | |
| matchesSBMLNamespaces(self, args) | libsbml.SBase | |
| populateAllElementIdList(self) | libsbml.Model | |
| populateAllElementMetaIdList(self) | libsbml.Model | |
| populateListFormulaUnitsData(self) | libsbml.Model | |
| removeCompartment(self, args) | libsbml.Model | |
| removeCompartmentType(self, args) | libsbml.Model | |
| removeConstraint(self, n) | libsbml.Model | |
| removeEvent(self, args) | libsbml.Model | |
| removeFromParentAndDelete(self) | libsbml.Model | |
| removeFunctionDefinition(self, args) | libsbml.Model | |
| removeInitialAssignment(self, args) | libsbml.Model | |
| removeParameter(self, args) | libsbml.Model | |
| removeReaction(self, args) | libsbml.Model | |
| removeRule(self, args) | libsbml.Model | |
| removeRuleByVariable(self, variable) | libsbml.Model | |
| removeSpecies(self, args) | libsbml.Model | |
| removeSpeciesType(self, args) | libsbml.Model | |
| removeTopLevelAnnotationElement(self, args) | libsbml.SBase | |
| removeUnitDefinition(self, args) | libsbml.Model | |
| renameMetaIdRefs(self, oldid, newid) | libsbml.SBase | |
| renameSIdRefs(self, oldid, newid) | libsbml.Model | |
| renameUnitSIdRefs(self, oldid, newid) | libsbml.Model | |
| replaceTopLevelAnnotationElement(self, args) | libsbml.SBase | |
| setAnnotation(self, args) | libsbml.Model | |
| setAreaUnits(self, units) | libsbml.Model | |
| setConversionFactor(self, units) | libsbml.Model | |
| setExtentUnits(self, units) | libsbml.Model | |
| setId(self, sid) | libsbml.Model | |
| setIdAttribute(self, sid) | libsbml.SBase | |
| setLengthUnits(self, units) | libsbml.Model | |
| setMetaId(self, metaid) | libsbml.SBase | |
| setModelHistory(self, history) | libsbml.SBase | |
| setName(self, name) | libsbml.Model | |
| setNamespaces(self, xmlns) | libsbml.SBase | |
| setNotes(self, args) | libsbml.SBase | |
| setSBOTerm(self, args) | libsbml.SBase | |
| setSubstanceUnits(self, units) | libsbml.Model | |
| setTimeUnits(self, units) | libsbml.Model | |
| setVolumeUnits(self, units) | libsbml.Model | |
| toSBML(self) | libsbml.SBase | |
| toXMLNode(self) | libsbml.SBase | |
| unsetAnnotation(self) | libsbml.SBase | |
| unsetAreaUnits(self) | libsbml.Model | |
| unsetConversionFactor(self) | libsbml.Model | |
| unsetCVTerms(self) | libsbml.SBase | |
| unsetExtentUnits(self) | libsbml.Model | |
| unsetId(self) | libsbml.Model | |
| unsetIdAttribute(self) | libsbml.SBase | |
| unsetLengthUnits(self) | libsbml.Model | |
| unsetMetaId(self) | libsbml.SBase | |
| unsetModelHistory(self) | libsbml.SBase | |
| unsetName(self) | libsbml.Model | |
| unsetNotes(self) | libsbml.SBase | |
| unsetSBOTerm(self) | libsbml.SBase | |
| unsetSubstanceUnits(self) | libsbml.Model | |
| unsetTimeUnits(self) | libsbml.Model | |
| unsetUserData(self) | libsbml.SBase | |
| unsetVolumeUnits(self) | libsbml.Model | |
