Class | Description |
---|---|
BindingSiteSpeciesType | |
CompartmentReference | |
DenotedSpeciesTypeComponentIndex |
Class removed from the draft specs 1.0 release 0.5 (2015-11-27)
|
InSpeciesTypeBond | |
IntraSpeciesReaction | |
MultiASTNodePlugin | |
MultiCompartmentPlugin | |
MultiConstants |
Contains some constants related to the multi package.
|
MultiModelPlugin |
In order to encode the structures needed to define and use multistate and multi-component
complexes, the element model is extended to be linked to a list of
SpeciesType s. |
MultiSimpleSpeciesReferencePlugin | |
MultiSpeciesPlugin | |
MultiSpeciesReferencePlugin | |
OutwardBindingSite | |
PossibleSpeciesFeatureValue |
Each state feature (
SpeciesFeatureType ) also requires the definition of all
the possible values it can take. |
SpeciesFeature | |
SpeciesFeatureChange | |
SpeciesFeatureType |
A species type (
SpeciesType ) can carry any number of features
(SpeciesFeatureType ), which are characteristic properties specific
for this type of species (Species ). |
SpeciesFeatureValue | |
SpeciesType |
The element SpeciesType, which is part of SBML Level 2 Version 4 specification, is not part
of SBML Level 3 Version 1 Core any more.
|
SpeciesTypeComponentIndex | |
SpeciesTypeComponentMapInProduct | |
SpeciesTypeInstance |
Enum | Description |
---|---|
BindingStatus |
The BindingStatus enumeration is used in the definition of the
OutwardBindingSite class. |
Relation |
The Relation enumeration is used in the definition of the ListOfSpeciesFeatures
class.
|
RepresentationType |
The RepresentationType enumeration is used in the extension of the ci element.
|
The current version implemented follow the proposal by Nicolas Le Novère and Anika Oellrich. There is only few classes from the proposal and it need to be completed.