org.sbml.jsbml.ext.spatial
public class ParameterType extends AbstractSBase
Modifier and Type | Field and Description |
---|---|
private static long |
serialVersionUID
Generated serial version identifier.
|
private java.lang.String |
speciesRef
Refers to species object that the parameter is associated with
|
private java.lang.String |
spId
Refers to SpIdRef in the documentation
|
ignoredExtensions, ignoredXMLElements
listOfListeners, parent, UNKNOWN_ATTRIBUTES, UNKNOWN_ELEMENTS
Constructor and Description |
---|
ParameterType() |
ParameterType(int level,
int version) |
ParameterType(ParameterType ref) |
Modifier and Type | Method and Description |
---|---|
ParameterType |
clone()
Creates a deep copy of this object, i.e., a new
SBase with the same properties
like this one. |
boolean |
equals(java.lang.Object object)
|
boolean |
getAllowsChildren() |
javax.swing.tree.TreeNode |
getChildAt(int childIndex) |
int |
getChildCount() |
Geometry |
getGeometryInstance() |
Species |
getSpeciesInstance() |
java.lang.String |
getSpeciesReference() |
java.lang.String |
getSpId() |
java.lang.String |
getVariable() |
Species |
getVariableInstance() |
int |
hashCode()
Returns a hash code value for this
SBase instance. |
boolean |
isSetSpatialRef() |
boolean |
isSetSpeciesReference() |
boolean |
isSetSpId() |
boolean |
isSetVariable() |
boolean |
readAttribute(java.lang.String attributeName,
java.lang.String prefix,
java.lang.String value)
Sets the given attribute in this
SBase . |
void |
setSpeciesReference(java.lang.String speciesRef) |
void |
setSpId(java.lang.String spId) |
void |
setVariable(java.lang.String speciesRef) |
java.lang.String |
toString() |
java.util.Map<java.lang.String,java.lang.String> |
writeXMLAttributes()
Returns a map with all the attributes of this
SBase that
need to be written out in XML. |
addCVTerm, addDeclaredNamespace, addExtension, addPlugin, appendNotes, appendNotes, checkLevelAndVersionCompatibility, createHistory, createPlugin, disablePackage, enablePackage, enablePackage, filterCVTerms, filterCVTerms, filterCVTerms, filterCVTerms, fireNodeRemovedEvent, firePropertyChange, getAnnotation, getAnnotationString, getCVTerm, getCVTermCount, getCVTerms, getDeclaredNamespaces, getElementName, getExtension, getExtensionCount, getExtensionPackages, getHistory, getIdManager, getLevel, getLevelAndVersion, getMetaId, getModel, getNamespace, getNotes, getNotesString, getNumCVTerms, getNumPlugins, getParent, getParentSBMLObject, getPlugin, getSBMLDocument, getSBOTerm, getSBOTermID, getVersion, hasValidAnnotation, hasValidLevelVersionNamespaceCombination, isExtendedByOtherPackages, isPackageEnabled, isPackageURIEnabled, isPkgEnabled, isPkgURIEnabled, isSetAnnotation, isSetHistory, isSetLevel, isSetLevelAndVersion, isSetMetaId, isSetNotes, isSetParentSBMLObject, isSetPlugin, isSetSBOTerm, isSetVersion, isValidLevelAndVersionCombination, isValidMetaId, notifyChildChange, registerChild, removeCVTerm, removeCVTerm, setAnnotation, setHistory, setLevel, setMetaId, setNamespace, setNotes, setNotes, setParentSBML, setParentSBMLObject, setSBOTerm, setSBOTerm, setThisAsParentSBMLObject, setVersion, unregisterChild, unsetAnnotation, unsetCVTerms, unsetExtension, unsetHistory, unsetMetaId, unsetNamespace, unsetNotes, unsetPlugin, unsetSBOTerm
addAllChangeListeners, addAllChangeListeners, addTreeNodeChangeListener, addTreeNodeChangeListener, children, clearUserObjects, containsUserObjectKey, filter, filter, filter, fireNodeAddedEvent, getIndex, getListOfTreeNodeChangeListeners, getNumChildren, getRoot, getTreeNodeChangeListenerCount, getUserObject, indexOf, isLeaf, isRoot, isSetParent, isSetUserObjects, putUserObject, removeAllTreeNodeChangeListeners, removeAllTreeNodeChangeListeners, removeFromParent, removeTreeNodeChangeListener, removeTreeNodeChangeListener, removeUserObject, setParent, userObjectKeySet
finalize, getClass, notify, notifyAll, wait, wait, wait
removeTreeNodeChangeListener
addAllChangeListeners, addAllChangeListeners, addTreeNodeChangeListener, addTreeNodeChangeListener, clearUserObjects, containsUserObjectKey, filter, filter, filter, fireNodeAddedEvent, getListOfTreeNodeChangeListeners, getRoot, getTreeNodeChangeListenerCount, getUserObject, isRoot, isSetParent, isSetUserObjects, putUserObject, removeAllTreeNodeChangeListeners, removeAllTreeNodeChangeListeners, removeFromParent, removeTreeNodeChangeListener, removeUserObject, userObjectKeySet
private static final long serialVersionUID
private java.lang.String spId
private java.lang.String speciesRef
public ParameterType()
public ParameterType(int level, int version)
level
- version
- public ParameterType(ParameterType ref)
ref
- public Species getSpeciesInstance()
public Species getVariableInstance()
public Geometry getGeometryInstance()
public java.lang.String getSpId()
public java.lang.String getSpeciesReference()
public java.lang.String getVariable()
public boolean isSetSpeciesReference()
public boolean isSetVariable()
public boolean isSetSpId()
public boolean isSetSpatialRef()
public void setSpId(java.lang.String spId)
variable
- the variable to setpublic void setSpeciesReference(java.lang.String speciesRef)
public void setVariable(java.lang.String speciesRef)
public ParameterType clone()
SBase
SBase
with the same properties
like this one.clone
in interface SBase
clone
in class AbstractSBase
public boolean getAllowsChildren()
getAllowsChildren
in interface javax.swing.tree.TreeNode
getAllowsChildren
in class AbstractSBase
public javax.swing.tree.TreeNode getChildAt(int childIndex)
getChildAt
in interface javax.swing.tree.TreeNode
getChildAt
in class AbstractSBase
public int getChildCount()
getChildCount
in interface javax.swing.tree.TreeNode
getChildCount
in class AbstractSBase
public boolean equals(java.lang.Object object)
SBase
public java.lang.String toString()
toString
in class AbstractSBase
public int hashCode()
SBase
SBase
instance.hashCode
in interface SBase
hashCode
in class AbstractSBase
SBase
instance.Object.hashCode()
public java.util.Map<java.lang.String,java.lang.String> writeXMLAttributes()
SBase
SBase
that
need to be written out in XML.
The attribute name is used as a key and the attribute value as value. If a prefix is needed for the attribute name, it need to be set directly in this map.
writeXMLAttributes
in interface SBase
writeXMLAttributes
in class AbstractSBase
Map
containing the XML attributes of this object.public boolean readAttribute(java.lang.String attributeName, java.lang.String prefix, java.lang.String value)
SBase
SBase
.
If the given attribute name is not recognized, nothing is done and
false
is returned.
readAttribute
in interface SBase
readAttribute
in class AbstractSBase
attributeName
- localName of the XML attributeprefix
- prefix of the XML attributevalue
- value of the XML attributetrue
if the attribute has been successfully read.