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Hierarchy For All Packages
Package Hierarchies:
org.sbml.jsbml
,
org.sbml.jsbml.ext
,
org.sbml.jsbml.resources
,
org.sbml.jsbml.text.parser
,
org.sbml.jsbml.util
,
org.sbml.jsbml.util.compilers
,
org.sbml.jsbml.util.filters
,
org.sbml.jsbml.validator
,
org.sbml.jsbml.xml
,
org.sbml.jsbml.xml.parsers
,
org.sbml.jsbml.xml.stax
,
org.sbml.jsbml.xml.xstream.converter
Class Hierarchy
java.lang.Object
org.sbml.jsbml.xml.parsers.
AbstractReaderWriter
(implements org.sbml.jsbml.xml.parsers.
ReadingParser
, org.sbml.jsbml.xml.parsers.
WritingParser
)
org.sbml.jsbml.
AbstractTreeNode
(implements org.sbml.jsbml.util.
TreeNodeWithChangeSupport
)
org.sbml.jsbml.
AbstractSBase
(implements org.sbml.jsbml.
SBase
)
org.sbml.jsbml.
AbstractMathContainer
(implements org.sbml.jsbml.
MathContainer
)
org.sbml.jsbml.
Constraint
org.sbml.jsbml.
Delay
org.sbml.jsbml.
EventAssignment
(implements org.sbml.jsbml.
Assignment
)
org.sbml.jsbml.
FunctionDefinition
(implements org.sbml.jsbml.
CallableSBase
, org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
InitialAssignment
(implements org.sbml.jsbml.
Assignment
)
org.sbml.jsbml.
KineticLaw
(implements org.sbml.jsbml.
SBaseWithUnit
)
org.sbml.jsbml.
Priority
org.sbml.jsbml.
Rule
org.sbml.jsbml.
AlgebraicRule
org.sbml.jsbml.
ExplicitRule
(implements org.sbml.jsbml.
Assignment
, org.sbml.jsbml.
SBaseWithUnit
)
org.sbml.jsbml.
AssignmentRule
org.sbml.jsbml.
RateRule
org.sbml.jsbml.xml.parsers.
SBMLLevel1Rule
org.sbml.jsbml.
StoichiometryMath
org.sbml.jsbml.
Trigger
org.sbml.jsbml.
AbstractNamedSBase
(implements org.sbml.jsbml.
NamedSBase
)
org.sbml.jsbml.
AbstractNamedSBaseWithUnit
(implements org.sbml.jsbml.
NamedSBaseWithDerivedUnit
, org.sbml.jsbml.
SBaseWithUnit
)
org.sbml.jsbml.
Event
(implements org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
QuantityWithUnit
(implements org.sbml.jsbml.
Quantity
)
org.sbml.jsbml.
LocalParameter
org.sbml.jsbml.
Symbol
(implements org.sbml.jsbml.
Variable
)
org.sbml.jsbml.
Compartment
org.sbml.jsbml.
Parameter
org.sbml.jsbml.
Species
org.sbml.jsbml.
CompartmentType
(implements org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
Model
(implements org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
Reaction
(implements org.sbml.jsbml.
CallableSBase
, org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
SimpleSpeciesReference
(implements org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
ModifierSpeciesReference
org.sbml.jsbml.
SpeciesReference
(implements org.sbml.jsbml.
Variable
)
org.sbml.jsbml.
SpeciesType
(implements org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
UnitDefinition
org.sbml.jsbml.
ListOf
<T> (implements java.util.List<E>)
org.sbml.jsbml.util.
ListOfWithName
<T>
org.sbml.jsbml.
SBMLDocument
org.sbml.jsbml.
Unit
org.sbml.jsbml.ext.
AbstractSBasePlugin
(implements org.sbml.jsbml.ext.
SBasePlugin
)
org.sbml.jsbml.
AnnotationElement
org.sbml.jsbml.
Annotation
org.sbml.jsbml.
Creator
org.sbml.jsbml.
CVTerm
org.sbml.jsbml.
History
org.sbml.jsbml.
ASTNode
org.sbml.jsbml.util.
TreeNodeAdapter
org.sbml.jsbml.xml.
XMLToken
org.sbml.jsbml.xml.
XMLNode
org.sbml.jsbml.util.filters.
AndFilter
(implements org.sbml.jsbml.util.filters.
Filter
)
org.sbml.jsbml.util.filters.
OrFilter
org.sbml.jsbml.util.filters.
AssignmentVariableFilter
(implements org.sbml.jsbml.util.filters.
Filter
)
org.sbml.jsbml.util.compilers.
ASTNodeValue
org.sbml.jsbml.util.filters.
BoundaryConditionFilter
(implements org.sbml.jsbml.util.filters.
Filter
)
org.sbml.jsbml.util.filters.
CVTermFilter
(implements org.sbml.jsbml.util.filters.
Filter
)
org.sbml.jsbml.xml.stax.
DateProcessor
org.sbml.jsbml.util.
Detail
java.util.EventObject (implements java.io.Serializable)
java.beans.PropertyChangeEvent
org.sbml.jsbml.util.
TreeNodeChangeEvent
org.sbml.jsbml.util.
TreeNodeRemovedEvent
org.sbml.jsbml.util.compilers.
FindUnitsCompiler
(implements org.sbml.jsbml.util.compilers.
ASTNodeCompiler
)
org.sbml.jsbml.text.parser.
FormulaParser
(implements org.sbml.jsbml.text.parser.
FormulaParserConstants
)
org.sbml.jsbml.text.parser.
FormulaParser.JJCalls
org.sbml.jsbml.text.parser.
FormulaParserLL3
(implements org.sbml.jsbml.text.parser.
FormulaParserLL3Constants
, org.sbml.jsbml.text.parser.
IFormulaParser
)
org.sbml.jsbml.text.parser.
FormulaParserLL3.JJCalls
org.sbml.jsbml.text.parser.
FormulaParserLL3TokenManager
(implements org.sbml.jsbml.text.parser.
FormulaParserLL3Constants
)
org.sbml.jsbml.text.parser.
FormulaParserTokenManager
(implements org.sbml.jsbml.text.parser.
FormulaParserConstants
)
org.sbml.jsbml.util.filters.
IdenticalUnitDefinitionFilter
(implements org.sbml.jsbml.util.filters.
Filter
)
org.sbml.jsbml.util.
JAXPFacade
(implements org.sbml.jsbml.util.
DocumentFactory
, org.sbml.jsbml.util.
NodeWriter
, org.sbml.jsbml.util.
SAX2Parser
)
org.sbml.jsbml.
JSBML
org.sbml.jsbml.util.compilers.
MathMLCompiler
(implements org.sbml.jsbml.util.compilers.
ASTNodeCompiler
)
org.sbml.jsbml.util.compilers.
HTMLFormula
org.sbml.jsbml.xml.parsers.
MathMLParser
(implements org.sbml.jsbml.xml.parsers.
ReadingParser
, org.sbml.jsbml.xml.parsers.
WritingParser
)
org.sbml.jsbml.xml.parsers.
MathMLStaxParser
(implements org.sbml.jsbml.xml.parsers.
ReadingParser
)
org.sbml.jsbml.util.compilers.
MathMLXMLStreamCompiler
org.sbml.jsbml.util.
Maths
org.sbml.jsbml.util.
Message
org.sbml.jsbml.xml.xstream.converter.
MessageConverter
org.sbml.jsbml.validator.
MultipartPost
org.sbml.jsbml.util.filters.
NameFilter
(implements org.sbml.jsbml.util.filters.
Filter
)
org.sbml.jsbml.util.filters.
SpeciesReferenceFilter
org.sbml.jsbml.util.
Option
org.sbml.jsbml.validator.
OverdeterminationValidator
org.sbml.jsbml.validator.
OverdeterminationValidator.InnerNode
<T> (implements org.sbml.jsbml.validator.
OverdeterminationValidator.Node
<S>)
org.sbml.jsbml.validator.
OverdeterminationValidator.StartNode
<T> (implements org.sbml.jsbml.validator.
OverdeterminationValidator.Node
<S>)
org.sbml.jsbml.validator.
OverdeterminationValidator.TerminalNode
<T> (implements org.sbml.jsbml.validator.
OverdeterminationValidator.Node
<S>)
org.sbml.jsbml.xml.parsers.
ParserManager
org.sbml.jsbml.resources.
Resource
java.util.ResourceBundle
org.sbml.jsbml.util.
XMLResourceBundleControl.XMLResourceBundle
java.util.ResourceBundle.Control
org.sbml.jsbml.util.
XMLResourceBundleControl
org.sbml.jsbml.util.
ResourceManager
org.sbml.jsbml.xml.parsers.
SBMLCoreParser
(implements org.sbml.jsbml.xml.parsers.
ReadingParser
, org.sbml.jsbml.xml.parsers.
WritingParser
)
org.sbml.jsbml.xml.xstream.converter.
SBMLErrorConverter
org.sbml.jsbml.
SBMLErrorLog
org.sbml.jsbml.xml.stax.
SBMLObjectForXML
org.sbml.jsbml.xml.parsers.
SBMLRDFAnnotationParser
(implements org.sbml.jsbml.xml.parsers.
AnnotationReader
, org.sbml.jsbml.xml.parsers.
AnnotationWriter
)
org.sbml.jsbml.
SBMLReader
(implements java.lang.Cloneable, java.io.Serializable)
org.sbml.jsbml.xml.stax.
SBMLReader
org.sbml.jsbml.util.
SBMLtools
org.sbml.jsbml.validator.
SBMLValidator
org.sbml.jsbml.
SBMLWriter
(implements java.lang.Cloneable, java.io.Serializable)
org.sbml.jsbml.xml.stax.
SBMLWriter
org.sbml.jsbml.
SBO
org.sbml.jsbml.
SBO.Term
(implements java.lang.Cloneable, java.lang.Comparable<T>, java.io.Serializable)
org.sbml.jsbml.
SBO.Triple
(implements java.lang.Cloneable, java.lang.Comparable<T>, java.io.Serializable)
org.sbml.jsbml.util.filters.
SBOFilter
(implements org.sbml.jsbml.util.filters.
Filter
)
org.sbml.jsbml.text.parser.
SimpleCharStream
org.sbml.jsbml.util.
SimpleTreeNodeChangeListener
(implements org.sbml.jsbml.util.
TreeNodeChangeListener
)
org.sbml.jsbml.util.
StringTools
org.sbml.jsbml.util.compilers.
FormulaCompiler
(implements org.sbml.jsbml.util.compilers.
ASTNodeCompiler
)
org.sbml.jsbml.util.compilers.
FormulaCompilerNoPiecewise
org.sbml.jsbml.util.compilers.
LibSBMLFormulaCompiler
org.sbml.jsbml.util.compilers.
LaTeXCompiler
(implements org.sbml.jsbml.util.compilers.
ASTNodeCompiler
)
org.sbml.jsbml.util.
SubModel
java.lang.Throwable (implements java.io.Serializable)
java.lang.Error
org.sbml.jsbml.text.parser.
FormulaParser.LookaheadSuccess
org.sbml.jsbml.text.parser.
FormulaParserLL3.LookaheadSuccess
org.sbml.jsbml.util.
NotImplementedException
org.sbml.jsbml.text.parser.
TokenMgrError
java.lang.Exception
org.sbml.jsbml.validator.
ModelOverdeterminedException
org.sbml.jsbml.text.parser.
ParseException
java.lang.RuntimeException
org.sbml.jsbml.xml.
XMLException
org.sbml.jsbml.
SBMLError
org.sbml.jsbml.
LevelVersionError
org.sbml.jsbml.
PropertyException
org.sbml.jsbml.
PropertyNotAvailableException
org.sbml.jsbml.
PropertyUndefinedError
org.sbml.jsbml.
SBMLTypeUndefinedException
org.sbml.jsbml.
SBMLException
org.sbml.jsbml.
IdentifierException
org.sbml.jsbml.util.compilers.
UnitException
org.sbml.jsbml.text.parser.
Token
(implements java.io.Serializable)
org.sbml.jsbml.util.compilers.
UnitsCompiler
(implements org.sbml.jsbml.util.compilers.
ASTNodeCompiler
)
org.sbml.jsbml.validator.
Validator
org.sbml.jsbml.util.
ValuePair
<L,V> (implements java.lang.Cloneable, java.lang.Comparable<T>, java.io.Serializable)
org.sbml.jsbml.xml.
XMLAttributes
org.sbml.jsbml.xml.stax.
XMLLogger
org.sbml.jsbml.xml.
XMLNamespaces
org.sbml.jsbml.util.filters.
XMLNodeFilter
(implements org.sbml.jsbml.util.filters.
Filter
)
org.sbml.jsbml.xml.parsers.
XMLNodeReader
(implements org.sbml.jsbml.xml.parsers.
ReadingParser
)
org.sbml.jsbml.xml.parsers.
XMLNodeWriter
org.sbml.jsbml.xml.
XMLTriple
Interface Hierarchy
org.sbml.jsbml.xml.parsers.
AnnotationReader
org.sbml.jsbml.xml.parsers.
AnnotationWriter
org.sbml.jsbml.util.compilers.
ASTNodeCompiler
java.lang.Cloneable
org.sbml.jsbml.util.
TreeNodeWithChangeSupport
(also extends java.io.Serializable, javax.swing.tree.TreeNode)
org.sbml.jsbml.
Assignment
org.sbml.jsbml.
CallableSBase
org.sbml.jsbml.
Quantity
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
Quantity
, org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
MathContainer
org.sbml.jsbml.
Assignment
org.sbml.jsbml.
NamedSBase
org.sbml.jsbml.
CallableSBase
org.sbml.jsbml.
Quantity
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
Quantity
, org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
NamedSBaseWithDerivedUnit
(also extends org.sbml.jsbml.
SBaseWithDerivedUnit
)
org.sbml.jsbml.
CallableSBase
org.sbml.jsbml.
Quantity
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
Quantity
, org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
Quantity
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
Quantity
, org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
Quantity
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
UniqueNamedSBase
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
Quantity
)
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
Quantity
, org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
NamedSBaseWithDerivedUnit
(also extends org.sbml.jsbml.
NamedSBase
, org.sbml.jsbml.
SBaseWithDerivedUnit
)
org.sbml.jsbml.
CallableSBase
org.sbml.jsbml.
Quantity
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
Quantity
, org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
Quantity
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
Quantity
, org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
Quantity
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
SBase
org.sbml.jsbml.
Assignment
org.sbml.jsbml.
CallableSBase
org.sbml.jsbml.
Quantity
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
Quantity
, org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
MathContainer
org.sbml.jsbml.
Assignment
org.sbml.jsbml.
NamedSBase
org.sbml.jsbml.
CallableSBase
org.sbml.jsbml.
Quantity
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
Quantity
, org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
NamedSBaseWithDerivedUnit
(also extends org.sbml.jsbml.
SBaseWithDerivedUnit
)
org.sbml.jsbml.
CallableSBase
org.sbml.jsbml.
Quantity
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
Quantity
, org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
Quantity
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
Quantity
, org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
Quantity
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
UniqueNamedSBase
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
Quantity
)
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
Quantity
, org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
NamedSBaseWithDerivedUnit
(also extends org.sbml.jsbml.
NamedSBase
, org.sbml.jsbml.
SBaseWithDerivedUnit
)
org.sbml.jsbml.
CallableSBase
org.sbml.jsbml.
Quantity
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
Quantity
, org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
Quantity
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
Quantity
, org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
Quantity
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
SBaseWithDerivedUnit
org.sbml.jsbml.
Assignment
org.sbml.jsbml.
CallableSBase
org.sbml.jsbml.
Quantity
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
Quantity
, org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
MathContainer
org.sbml.jsbml.
Assignment
org.sbml.jsbml.
NamedSBaseWithDerivedUnit
(also extends org.sbml.jsbml.
NamedSBase
)
org.sbml.jsbml.
CallableSBase
org.sbml.jsbml.
Quantity
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
Quantity
, org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
Quantity
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
Quantity
, org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
Quantity
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
SBaseWithUnit
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
Quantity
, org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
SBaseWithUnit
org.sbml.jsbml.
UniqueNamedSBase
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
Quantity
)
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
Quantity
, org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.ext.
SBasePlugin
org.sbml.jsbml.
SBaseWithDerivedUnit
org.sbml.jsbml.
Assignment
org.sbml.jsbml.
CallableSBase
org.sbml.jsbml.
Quantity
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
Quantity
, org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
MathContainer
org.sbml.jsbml.
Assignment
org.sbml.jsbml.
NamedSBaseWithDerivedUnit
(also extends org.sbml.jsbml.
NamedSBase
)
org.sbml.jsbml.
CallableSBase
org.sbml.jsbml.
Quantity
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
Quantity
, org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
Quantity
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
Quantity
, org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
Quantity
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
SBaseWithUnit
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
Quantity
, org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
SBaseWithUnit
org.sbml.jsbml.
UniqueNamedSBase
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
Quantity
)
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
Quantity
, org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.util.
DocumentFactory
java.util.EventListener
org.sbml.jsbml.util.
ProgressListener
java.beans.PropertyChangeListener
org.sbml.jsbml.util.
TreeNodeChangeListener
org.sbml.jsbml.util.filters.
Filter
org.sbml.jsbml.text.parser.
FormulaParserConstants
org.sbml.jsbml.text.parser.
FormulaParserLL3Constants
org.sbml.jsbml.text.parser.
IFormulaParser
org.sbml.jsbml.util.
NodeWriter
org.sbml.jsbml.validator.
OverdeterminationValidator.Node
<S>
org.sbml.jsbml.xml.parsers.
PackageParser
org.sbml.jsbml.xml.parsers.
ReadingParser
org.sbml.jsbml.util.
SAX2Parser
org.sbml.jsbml.
SBMLInputConverter
<T>
org.sbml.jsbml.
SBMLOutputConverter
<T>
java.io.Serializable
org.sbml.jsbml.util.
TreeNodeWithChangeSupport
(also extends java.lang.Cloneable, javax.swing.tree.TreeNode)
org.sbml.jsbml.
Assignment
org.sbml.jsbml.
CallableSBase
org.sbml.jsbml.
Quantity
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
Quantity
, org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
MathContainer
org.sbml.jsbml.
Assignment
org.sbml.jsbml.
NamedSBase
org.sbml.jsbml.
CallableSBase
org.sbml.jsbml.
Quantity
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
Quantity
, org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
NamedSBaseWithDerivedUnit
(also extends org.sbml.jsbml.
SBaseWithDerivedUnit
)
org.sbml.jsbml.
CallableSBase
org.sbml.jsbml.
Quantity
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
Quantity
, org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
Quantity
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
Quantity
, org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
Quantity
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
UniqueNamedSBase
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
Quantity
)
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
Quantity
, org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
NamedSBaseWithDerivedUnit
(also extends org.sbml.jsbml.
NamedSBase
, org.sbml.jsbml.
SBaseWithDerivedUnit
)
org.sbml.jsbml.
CallableSBase
org.sbml.jsbml.
Quantity
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
Quantity
, org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
Quantity
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
Quantity
, org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
Quantity
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
SBase
org.sbml.jsbml.
Assignment
org.sbml.jsbml.
CallableSBase
org.sbml.jsbml.
Quantity
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
Quantity
, org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
MathContainer
org.sbml.jsbml.
Assignment
org.sbml.jsbml.
NamedSBase
org.sbml.jsbml.
CallableSBase
org.sbml.jsbml.
Quantity
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
Quantity
, org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
NamedSBaseWithDerivedUnit
(also extends org.sbml.jsbml.
SBaseWithDerivedUnit
)
org.sbml.jsbml.
CallableSBase
org.sbml.jsbml.
Quantity
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
Quantity
, org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
Quantity
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
Quantity
, org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
Quantity
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
UniqueNamedSBase
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
Quantity
)
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
Quantity
, org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
NamedSBaseWithDerivedUnit
(also extends org.sbml.jsbml.
NamedSBase
, org.sbml.jsbml.
SBaseWithDerivedUnit
)
org.sbml.jsbml.
CallableSBase
org.sbml.jsbml.
Quantity
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
Quantity
, org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
Quantity
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
Quantity
, org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
Quantity
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
SBaseWithDerivedUnit
org.sbml.jsbml.
Assignment
org.sbml.jsbml.
CallableSBase
org.sbml.jsbml.
Quantity
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
Quantity
, org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
MathContainer
org.sbml.jsbml.
Assignment
org.sbml.jsbml.
NamedSBaseWithDerivedUnit
(also extends org.sbml.jsbml.
NamedSBase
)
org.sbml.jsbml.
CallableSBase
org.sbml.jsbml.
Quantity
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
Quantity
, org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
Quantity
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
Quantity
, org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
Quantity
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
SBaseWithUnit
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
Quantity
, org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
SBaseWithUnit
org.sbml.jsbml.
UniqueNamedSBase
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
Quantity
)
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
Quantity
, org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.ext.
SBasePlugin
org.sbml.jsbml.
SBaseWithDerivedUnit
org.sbml.jsbml.
Assignment
org.sbml.jsbml.
CallableSBase
org.sbml.jsbml.
Quantity
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
Quantity
, org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
MathContainer
org.sbml.jsbml.
Assignment
org.sbml.jsbml.
NamedSBaseWithDerivedUnit
(also extends org.sbml.jsbml.
NamedSBase
)
org.sbml.jsbml.
CallableSBase
org.sbml.jsbml.
Quantity
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
Quantity
, org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
Quantity
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
Quantity
, org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
Quantity
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
SBaseWithUnit
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
Quantity
, org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
SBaseWithUnit
org.sbml.jsbml.
UniqueNamedSBase
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
Quantity
)
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
Quantity
, org.sbml.jsbml.
UniqueNamedSBase
)
javax.swing.tree.TreeNode
org.sbml.jsbml.util.
TreeNodeWithChangeSupport
(also extends java.lang.Cloneable, java.io.Serializable)
org.sbml.jsbml.
Assignment
org.sbml.jsbml.
CallableSBase
org.sbml.jsbml.
Quantity
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
Quantity
, org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
MathContainer
org.sbml.jsbml.
Assignment
org.sbml.jsbml.
NamedSBase
org.sbml.jsbml.
CallableSBase
org.sbml.jsbml.
Quantity
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
Quantity
, org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
NamedSBaseWithDerivedUnit
(also extends org.sbml.jsbml.
SBaseWithDerivedUnit
)
org.sbml.jsbml.
CallableSBase
org.sbml.jsbml.
Quantity
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
Quantity
, org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
Quantity
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
Quantity
, org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
Quantity
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
UniqueNamedSBase
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
Quantity
)
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
Quantity
, org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
NamedSBaseWithDerivedUnit
(also extends org.sbml.jsbml.
NamedSBase
, org.sbml.jsbml.
SBaseWithDerivedUnit
)
org.sbml.jsbml.
CallableSBase
org.sbml.jsbml.
Quantity
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
Quantity
, org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
Quantity
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
Quantity
, org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
Quantity
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
SBase
org.sbml.jsbml.
Assignment
org.sbml.jsbml.
CallableSBase
org.sbml.jsbml.
Quantity
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
Quantity
, org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
MathContainer
org.sbml.jsbml.
Assignment
org.sbml.jsbml.
NamedSBase
org.sbml.jsbml.
CallableSBase
org.sbml.jsbml.
Quantity
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
Quantity
, org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
NamedSBaseWithDerivedUnit
(also extends org.sbml.jsbml.
SBaseWithDerivedUnit
)
org.sbml.jsbml.
CallableSBase
org.sbml.jsbml.
Quantity
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
Quantity
, org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
Quantity
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
Quantity
, org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
Quantity
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
UniqueNamedSBase
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
Quantity
)
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
Quantity
, org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
NamedSBaseWithDerivedUnit
(also extends org.sbml.jsbml.
NamedSBase
, org.sbml.jsbml.
SBaseWithDerivedUnit
)
org.sbml.jsbml.
CallableSBase
org.sbml.jsbml.
Quantity
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
Quantity
, org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
Quantity
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
Quantity
, org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
Quantity
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
SBaseWithDerivedUnit
org.sbml.jsbml.
Assignment
org.sbml.jsbml.
CallableSBase
org.sbml.jsbml.
Quantity
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
Quantity
, org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
MathContainer
org.sbml.jsbml.
Assignment
org.sbml.jsbml.
NamedSBaseWithDerivedUnit
(also extends org.sbml.jsbml.
NamedSBase
)
org.sbml.jsbml.
CallableSBase
org.sbml.jsbml.
Quantity
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
Quantity
, org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
Quantity
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
Quantity
, org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
Quantity
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
SBaseWithUnit
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
Quantity
, org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
SBaseWithUnit
org.sbml.jsbml.
UniqueNamedSBase
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
Quantity
)
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
Quantity
, org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.ext.
SBasePlugin
org.sbml.jsbml.
SBaseWithDerivedUnit
org.sbml.jsbml.
Assignment
org.sbml.jsbml.
CallableSBase
org.sbml.jsbml.
Quantity
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
Quantity
, org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
MathContainer
org.sbml.jsbml.
Assignment
org.sbml.jsbml.
NamedSBaseWithDerivedUnit
(also extends org.sbml.jsbml.
NamedSBase
)
org.sbml.jsbml.
CallableSBase
org.sbml.jsbml.
Quantity
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
Quantity
, org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
Quantity
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
Quantity
, org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
Quantity
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
SBaseWithUnit
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
Quantity
, org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.
SBaseWithUnit
org.sbml.jsbml.
UniqueNamedSBase
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
Quantity
)
org.sbml.jsbml.
Variable
(also extends org.sbml.jsbml.
Quantity
, org.sbml.jsbml.
UniqueNamedSBase
)
org.sbml.jsbml.xml.parsers.
WritingParser
Enum Hierarchy
java.lang.Object
java.lang.Enum<E> (implements java.lang.Comparable<T>, java.io.Serializable)
org.sbml.jsbml.
AbstractSBase.NOTES_TYPE
org.sbml.jsbml.
ASTNode.Type
org.sbml.jsbml.
SBMLException.Category
org.sbml.jsbml.
SBMLException.Code
org.sbml.jsbml.
SBMLException.Type
org.sbml.jsbml.
CVTerm.Qualifier
org.sbml.jsbml.
CVTerm.Type
org.sbml.jsbml.
ListOf.Type
org.sbml.jsbml.
SBMLError.SEVERITY
org.sbml.jsbml.
Unit.Kind
org.sbml.jsbml.validator.
SBMLValidator.CHECK_CATEGORY
org.sbml.jsbml.xml.parsers.
SBMLRDFAnnotationParser.NODE_COLOR
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