org.sbml.jsbml.ext.spatial

Class SpatialReactionPlugin

java.lang.Object

org.sbml.jsbml.AbstractTreeNode

org.sbml.jsbml.ext.AbstractSBasePlugin

org.sbml.jsbml.ext.spatial.AbstractSpatialSBasePlugin

org.sbml.jsbml.ext.spatial.SpatialReactionPlugin

All Implemented Interfaces:

java.io.Serializable, java.lang.Cloneable, javax.swing.tree.TreeNode, SBasePlugin, TreeNodeWithChangeSupport

public class SpatialReactionPlugin
extends AbstractSpatialSBasePlugin

Since:

1.0

Version:

$Rev: 1724 $

Author:

Alex Thomas, Andreas Dräger

See Also:

Serialized Form

Field Summary

Fields

Modifier and Type	Field and Description
private java.lang.Boolean	isLocal
private static long	serialVersionUID Generated serial version identifier.

Fields inherited from class org.sbml.jsbml.ext.AbstractSBasePlugin

extendedSBase, packageVersion

Fields inherited from class org.sbml.jsbml.AbstractTreeNode

listOfListeners, parent, UNKNOWN_ATTRIBUTES, UNKNOWN_ELEMENTS

Constructor Summary

Constructors

Constructor and Description
SpatialReactionPlugin()
SpatialReactionPlugin(Reaction rxn)
SpatialReactionPlugin(SpatialReactionPlugin spr)

Method Summary

Methods

Modifier and Type	Method and Description
SpatialReactionPlugin	clone() Creates a new instance of SBasePlugin from this SBasePlugin.
boolean	equals(java.lang.Object object)
boolean	getAllowsChildren()
javax.swing.tree.TreeNode	getChildAt(int index)
int	getChildCount()
Reaction	getExtendedSBase() Returns the SBase object that is extended by this plug-in.
boolean	getIsLocal() Returns the value of isLocal
int	hashCode()
boolean	isLocal()
boolean	isSetIsLocal() Returns whether isLocal is set
boolean	readAttribute(java.lang.String attributeName, java.lang.String prefix, java.lang.String value) Reads and sets the attribute if it is know from this SBasePlugin.
void	setIsLocal(boolean isLocal) Sets the value of isLocal
java.lang.String	toString()
boolean	unsetIsLocal() Unsets the variable isLocal
java.util.Map<java.lang.String,java.lang.String>	writeXMLAttributes() Returns a Map containing the XML attributes of this object.

Methods inherited from class org.sbml.jsbml.ext.spatial.AbstractSpatialSBasePlugin

getElementNamespace, getModel, getPackageName, getParent, getParentSBMLObject, getPrefix, getURI

Methods inherited from class org.sbml.jsbml.ext.AbstractSBasePlugin

fireNodeAddedEvent, fireNodeRemovedEvent, firePropertyChange, getLevel, getPackageVersion, getSBMLDocument, getVersion, isSetExtendedSBase, removeFromParent, setExtendedSBase

Methods inherited from class org.sbml.jsbml.AbstractTreeNode

addAllChangeListeners, addAllChangeListeners, addTreeNodeChangeListener, addTreeNodeChangeListener, children, clearUserObjects, containsUserObjectKey, filter, filter, filter, getIndex, getListOfTreeNodeChangeListeners, getNumChildren, getRoot, getTreeNodeChangeListenerCount, getUserObject, indexOf, isLeaf, isRoot, isSetParent, isSetUserObjects, notifyChildChange, putUserObject, removeAllTreeNodeChangeListeners, removeAllTreeNodeChangeListeners, removeTreeNodeChangeListener, removeTreeNodeChangeListener, removeUserObject, setParent, userObjectKeySet

Methods inherited from class java.lang.Object

finalize, getClass, notify, notifyAll, wait, wait, wait

Methods inherited from interface org.sbml.jsbml.util.TreeNodeWithChangeSupport

addAllChangeListeners, addAllChangeListeners, addTreeNodeChangeListener, addTreeNodeChangeListener, clearUserObjects, containsUserObjectKey, filter, filter, filter, getListOfTreeNodeChangeListeners, getRoot, getTreeNodeChangeListenerCount, getUserObject, isRoot, isSetParent, isSetUserObjects, putUserObject, removeAllTreeNodeChangeListeners, removeAllTreeNodeChangeListeners, removeTreeNodeChangeListener, removeTreeNodeChangeListener, removeUserObject, userObjectKeySet

Methods inherited from interface javax.swing.tree.TreeNode

children, getIndex, isLeaf

Field Detail

serialVersionUID

private static final long serialVersionUID

Generated serial version identifier.

See Also:

Constant Field Values

isLocal

private java.lang.Boolean isLocal

Constructor Detail

SpatialReactionPlugin

public SpatialReactionPlugin()

SpatialReactionPlugin

public SpatialReactionPlugin(Reaction rxn)

SpatialReactionPlugin

public SpatialReactionPlugin(SpatialReactionPlugin spr)

Parameters:

node -

Method Detail

clone

public SpatialReactionPlugin clone()

Description copied from interface: SBasePlugin

Creates a new instance of SBasePlugin from this SBasePlugin.

Specified by:

clone in interface SBasePlugin

Specified by:

clone in class AbstractSBasePlugin

Returns:

a new instance of SBasePlugin from this SBasePlugin.

equals

public boolean equals(java.lang.Object object)

Specified by:

equals in interface SBasePlugin

Overrides:

equals in class AbstractSBasePlugin

getExtendedSBase

public Reaction getExtendedSBase()

Description copied from interface: SBasePlugin

Returns the SBase object that is extended by this plug-in.

Specified by:

getExtendedSBase in interface SBasePlugin

Overrides:

getExtendedSBase in class AbstractSBasePlugin

Returns:

the SBase object that is extended by this plug-in.

getIsLocal

public boolean getIsLocal()

Returns the value of isLocal

Returns:

the value of isLocal

isSetIsLocal

public boolean isSetIsLocal()

Returns whether isLocal is set

Returns:

whether isLocal is set

isLocal

public boolean isLocal()

setIsLocal

public void setIsLocal(boolean isLocal)

Sets the value of isLocal

unsetIsLocal

public boolean unsetIsLocal()

Unsets the variable isLocal

Returns:

true, if isLocal was set before, otherwise false

getAllowsChildren

public boolean getAllowsChildren()

getChildCount

public int getChildCount()

getChildAt

public javax.swing.tree.TreeNode getChildAt(int index)

hashCode

public int hashCode()

Specified by:

hashCode in interface SBasePlugin

Overrides:

hashCode in class AbstractSBasePlugin

writeXMLAttributes

public java.util.Map<java.lang.String,java.lang.String> writeXMLAttributes()

Description copied from interface: SBasePlugin

Returns a Map containing the XML attributes of this object.

Specified by:

writeXMLAttributes in interface SBasePlugin

Overrides:

writeXMLAttributes in class AbstractSpatialSBasePlugin

Returns:

a Map containing the XML attributes of this object.

readAttribute

public boolean readAttribute(java.lang.String attributeName,
                    java.lang.String prefix,
                    java.lang.String value)

Description copied from interface: SBasePlugin

Reads and sets the attribute if it is know from this SBasePlugin.

Specified by:

readAttribute in interface SBasePlugin

Overrides:

readAttribute in class AbstractSpatialSBasePlugin

Parameters:

attributeName - localName of the XML attribute

prefix - prefix of the XML attribute

value - value of the XML attribute

Returns:

true if the attribute has been successfully read.

toString

public java.lang.String toString()

Overrides:

toString in class AbstractTreeNode