org.sbml.jsbml.ext.spatial

Class SpatialSpeciesPlugin

java.lang.Object

org.sbml.jsbml.AbstractTreeNode

org.sbml.jsbml.ext.AbstractSBasePlugin

org.sbml.jsbml.ext.spatial.AbstractSpatialSBasePlugin

org.sbml.jsbml.ext.spatial.SpatialSpeciesPlugin

All Implemented Interfaces:

java.io.Serializable, java.lang.Cloneable, javax.swing.tree.TreeNode, SBasePlugin, TreeNodeWithChangeSupport

public class SpatialSpeciesPlugin
extends AbstractSpatialSBasePlugin

Since:

1.0

Version:

$Rev: 1980 $

Author:

Alex Thomas, Andreas Dräger

See Also:

Serialized Form

Field Summary

Fields

Modifier and Type	Field and Description
private static java.util.ResourceBundle	bundle Localization support
private static long	serialVersionUID Generated serial version identifier.
private java.lang.Boolean	spatial

Fields inherited from class org.sbml.jsbml.ext.AbstractSBasePlugin

extendedSBase, packageVersion

Fields inherited from class org.sbml.jsbml.AbstractTreeNode

listOfListeners, parent, UNKNOWN_ATTRIBUTES, UNKNOWN_ELEMENTS

Constructor Summary

Constructors

Constructor and Description
SpatialSpeciesPlugin()
SpatialSpeciesPlugin(SpatialSpeciesPlugin sb)
SpatialSpeciesPlugin(Species sp)

Method Summary

Methods

Modifier and Type	Method and Description
SpatialSpeciesPlugin	clone() Creates a new instance of SBasePlugin from this SBasePlugin.
boolean	equals(java.lang.Object object)
boolean	getAllowsChildren()
javax.swing.tree.TreeNode	getChildAt(int childIndex)
int	getChildCount()
Species	getExtendedSBase() Returns the SBase object that is extended by this plug-in.
boolean	getSpatial()
int	hashCode()
boolean	isSetSpatial()
boolean	isSpatial()
boolean	readAttribute(java.lang.String attributeName, java.lang.String prefix, java.lang.String value) Reads and sets the attribute if it is know from this SBasePlugin.
void	setSpatial(boolean isSpatial)
java.lang.String	toString()
java.util.Map<java.lang.String,java.lang.String>	writeXMLAttributes() Returns a Map containing the XML attributes of this object.

Methods inherited from class org.sbml.jsbml.ext.spatial.AbstractSpatialSBasePlugin

getElementNamespace, getModel, getPackageName, getParent, getParentSBMLObject, getPrefix, getURI

Methods inherited from class org.sbml.jsbml.ext.AbstractSBasePlugin

fireNodeAddedEvent, fireNodeRemovedEvent, firePropertyChange, getLevel, getPackageVersion, getSBMLDocument, getVersion, isSetExtendedSBase, removeFromParent, setExtendedSBase

Methods inherited from class org.sbml.jsbml.AbstractTreeNode

addAllChangeListeners, addAllChangeListeners, addTreeNodeChangeListener, addTreeNodeChangeListener, children, clearUserObjects, containsUserObjectKey, filter, filter, filter, getIndex, getListOfTreeNodeChangeListeners, getNumChildren, getRoot, getTreeNodeChangeListenerCount, getUserObject, indexOf, isLeaf, isRoot, isSetParent, isSetUserObjects, notifyChildChange, putUserObject, removeAllTreeNodeChangeListeners, removeAllTreeNodeChangeListeners, removeTreeNodeChangeListener, removeTreeNodeChangeListener, removeUserObject, setParent, userObjectKeySet

Methods inherited from class java.lang.Object

finalize, getClass, notify, notifyAll, wait, wait, wait

Methods inherited from interface org.sbml.jsbml.util.TreeNodeWithChangeSupport

addAllChangeListeners, addAllChangeListeners, addTreeNodeChangeListener, addTreeNodeChangeListener, clearUserObjects, containsUserObjectKey, filter, filter, filter, getListOfTreeNodeChangeListeners, getRoot, getTreeNodeChangeListenerCount, getUserObject, isRoot, isSetParent, isSetUserObjects, putUserObject, removeAllTreeNodeChangeListeners, removeAllTreeNodeChangeListeners, removeTreeNodeChangeListener, removeTreeNodeChangeListener, removeUserObject, userObjectKeySet

Methods inherited from interface javax.swing.tree.TreeNode

children, getIndex, isLeaf

Field Detail

serialVersionUID

private static final long serialVersionUID

Generated serial version identifier.

See Also:

Constant Field Values

spatial

private java.lang.Boolean spatial

bundle

private static final java.util.ResourceBundle bundle

Localization support

Constructor Detail

SpatialSpeciesPlugin

public SpatialSpeciesPlugin()

SpatialSpeciesPlugin

public SpatialSpeciesPlugin(Species sp)

Parameters:

Species - sp

SpatialSpeciesPlugin

public SpatialSpeciesPlugin(SpatialSpeciesPlugin sb)

Parameters:

SpatialSpeciesPlugin - sb

Method Detail

clone

public SpatialSpeciesPlugin clone()

Description copied from interface: SBasePlugin

Creates a new instance of SBasePlugin from this SBasePlugin.

Specified by:

clone in interface SBasePlugin

Specified by:

clone in class AbstractSBasePlugin

Returns:

a new instance of SBasePlugin from this SBasePlugin.

getExtendedSBase

public Species getExtendedSBase()

Description copied from interface: SBasePlugin

Returns the SBase object that is extended by this plug-in.

Specified by:

getExtendedSBase in interface SBasePlugin

Overrides:

getExtendedSBase in class AbstractSBasePlugin

Returns:

the SBase object that is extended by this plug-in.

getSpatial

public boolean getSpatial()

Returns:

the isSpatial

hashCode

public int hashCode()

Specified by:

hashCode in interface SBasePlugin

Overrides:

hashCode in class AbstractSBasePlugin

toString

public java.lang.String toString()

Overrides:

toString in class AbstractTreeNode

isSetSpatial

public boolean isSetSpatial()

Returns:

isSpatial

public boolean isSpatial()

Returns:

See Also:

#getIsSpatial()

setSpatial

public void setSpatial(boolean isSpatial)

Parameters:

isSpatial - the isSpatial to set

readAttribute

public boolean readAttribute(java.lang.String attributeName,
                    java.lang.String prefix,
                    java.lang.String value)

Description copied from interface: SBasePlugin

Reads and sets the attribute if it is know from this SBasePlugin.

Specified by:

readAttribute in interface SBasePlugin

Overrides:

readAttribute in class AbstractSpatialSBasePlugin

Parameters:

attributeName - localName of the XML attribute

prefix - prefix of the XML attribute

value - value of the XML attribute

Returns:

true if the attribute has been successfully read.

writeXMLAttributes

public java.util.Map<java.lang.String,java.lang.String> writeXMLAttributes()

Description copied from interface: SBasePlugin

Returns a Map containing the XML attributes of this object.

Specified by:

writeXMLAttributes in interface SBasePlugin

Overrides:

writeXMLAttributes in class AbstractSpatialSBasePlugin

Returns:

a Map containing the XML attributes of this object.

getAllowsChildren

public boolean getAllowsChildren()

getChildAt

public javax.swing.tree.TreeNode getChildAt(int childIndex)

getChildCount

public int getChildCount()

equals

public boolean equals(java.lang.Object object)

Specified by:

equals in interface SBasePlugin

Overrides:

equals in class AbstractSBasePlugin