libSBML Python API
5.18.0
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This class of objects is defined by libSBML only and has no direct equivalent in terms of SBML components. This class is not prescribed by the SBML specifications, although it is used to implement features defined in SBML.
A Date object stores a reasonably complete representation of date and time. Its purpose is to serve as a way to store dates to be read and written in the W3C date format used in RDF Dublin Core annotations within SBML. The W3C date format is a restricted form of ISO 8601, the international standard for the representation of dates and times. A time and date value in this W3C format takes the form YYYY-MM-DDThh:mm:ssXHH:ZZ (e.g., 1997-07-16T19:20:30+01:00
) where XHH:ZZ is the time zone offset. The libSBML Date object contains the following fields to represent these values:
2011
.1
represents January, and so on.0
signifying +
and 1
signifying -
). See the paragraph below for further explanations.To illustrate the time zone offset, a value of -05:00
would correspond to USA Eastern Standard Time. In the Date object, this would require a value of 1
for the sign field, 5
for the hour offset and 0
for the minutes offset.
In the restricted RDF annotations used in SBML, described in Section 6 of the SBML Level 2 and Level 3 specification documents, date/time stamps can be used to indicate the time of creation and modification of a model. The following SBML model fragment illustrates this:
<model metaid='_180340' id='GMO' name='Goldbeter1991_MinMitOscil'> <annotation> <rdf:RDF xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#' xmlns:dc='http://purl.org/dc/elements/1.1/' xmlns:dcterms='http://purl.org/dc/terms/' xmlns:vCard='http://www.w3.org/2001/vcard-rdf/3.0#' > <rdf:Description rdf:about='#_180340'> <dc:creator> <rdf:Bag> <rdf:li rdf:parseType='Resource'> <vCard:N rdf:parseType='Resource'> <vCard:Family>Shapiro</vCard:Family> <vCard:Given>Bruce</vCard:Given> </vCard:N> <vCard:EMAIL>bshapiro@jpl.nasa.gov</vCard:EMAIL> <vCard:ORG rdf:parseType='Resource'> <vCard:Orgname>NASA Jet Propulsion Laboratory</vCard:Orgname> </vCard:ORG> </rdf:li> </rdf:Bag> </dc:creator> <dcterms:created rdf:parseType='Resource'> <dcterms:W3CDTF>2005-02-06T23:39:40+00:00</dcterms:W3CDTF> </dcterms:created> <dcterms:modified rdf:parseType='Resource'> <dcterms:W3CDTF>2005-09-13T13:24:56+00:00</dcterms:W3CDTF> </dcterms:modified> </rdf:Description> </rdf:RDF> </annotation> </model>
Public Member Functions | |
def | __init__ (self, args) |
This method has multiple variants; they differ in the arguments they accept. More... | |
def | clone (self) |
Creates and returns a deep copy of this Date object. More... | |
def | getDateAsString (self) |
Returns the current Date value in text-string form. More... | |
def | getDay (self) |
Returns the day from this Date. More... | |
def | getHour (self) |
Returns the hour from this Date. More... | |
def | getHoursOffset (self) |
Returns the hours of the time zone offset from this Date. More... | |
def | getMinute (self) |
Returns the minute from this Date. More... | |
def | getMinutesOffset (self) |
Returns the minutes of the time zone offset from this Date. More... | |
def | getMonth (self) |
Returns the month from this Date. More... | |
def | getSecond (self) |
Returns the seconds from this Date. More... | |
def | getSignOffset (self) |
Returns the sign of the time zone offset from this Date. More... | |
def | getYear (self) |
Returns the year from this Date. More... | |
def | representsValidDate (self) |
Returns True or False depending on whether this date object represents a valid date and time value. More... | |
def | setDateAsString (self, date) |
Sets the value of this Date object using a date and time value expressed as a text string. More... | |
def | setDay (self, day) |
Sets the value of the day of this Date object. More... | |
def | setHour (self, hour) |
Sets the value of the hour of this Date object. More... | |
def | setHoursOffset (self, hoursOffset) |
Sets the value of this Date object's time zone hour offset. More... | |
def | setMinute (self, minute) |
Sets the value of the minute of this Date object. More... | |
def | setMinutesOffset (self, minutesOffset) |
Sets the value of this Date object's time zone minutes offset. More... | |
def | setMonth (self, month) |
Sets the value of the month of this Date object. More... | |
def | setSecond (self, second) |
Sets the value of the second of the Date object. More... | |
def | setSignOffset (self, sign) |
Sets the value of the sign of the time zone offset of this Date object. More... | |
def | setYear (self, year) |
Sets the value of the year of this Date object. More... | |
def libsbml.Date.__init__ | ( | self, | |
args | |||
) |
This method has multiple variants; they differ in the arguments they accept.
__init__(long year=2000, long month=1, long day=1, long hour=0, long minute=0, long second=0, long sign=0, long hoursOffset=0, long minutesOffset=0) Date __init__(long year=2000, long month=1, long day=1, long hour=0, long minute=0, long second=0, long sign=0, long hoursOffset=0) Date __init__(long year=2000, long month=1, long day=1, long hour=0, long minute=0, long second=0, long sign=0) Date __init__(long year=2000, long month=1, long day=1, long hour=0, long minute=0, long second=0) Date __init__(long year=2000, long month=1, long day=1, long hour=0, long minute=0) Date __init__(long year=2000, long month=1, long day=1, long hour=0) Date __init__(long year=2000, long month=1, long day=1) Date __init__(long year=2000, long month=1) Date __init__(long year=2000) Date __init__() Date __init__(string date) Date __init__(Date orig) Date
Each variant is described separately below.
Date(string date)
Creates a Date object from a string expressing a date and time value.
This constructor expects its argument to be in the W3C date format with time zone offset, used in RDF Dublin Core annotations within SBML.
2011
.1
represents January, and so on.T
.+
or -
.In the string format above, it is important not to forget the literal character T
in the string. Here is an example date/time string: 1997-07-16T19:20:30+01:00
, which would represent July 16, 1997, at 19:20:30 in Central European Time (which is UTC +1:00).
If this constructor is given a None
argument or a string of length zero, it constructs a Date object with the value of January 1, 2000, at time 00:00 UTC. Otherwise, the argument must be in the complete format described above, or unpredictable results will happen.
date | a string representing the date. |
Date(long year = 2000, long month = 1, long day = 1, long hour = 0, long minute = 0, long second = 0, long sign = 0, long hoursOffset = 0, long minutesOffset = 0)
Creates a time and date representation for use in model annotations and elsewhere.
The following is the complete set of possible arguments to this constructor, with default values as indicated:
year | a long integereger representing the year. This should be a four-digit number such as 2011 . (Default value used if this argument is not given: 2000 .) |
month | a long integereger representing the month, with a range of values of 1–12. The value 1 represents January, and so on. (Default value used if this argument is not given: 1 .) |
day | a long integereger representing the day of the month, with a range of values of 1–31. (Default value used if this argument is not given: 1 .) |
hour | a long integereger representing the hour on a 24-hour clock, with a range of values of 0–23. (Default value used if this argument is not given: 0 .) |
minute | a long integereger representing the minute, with a range of 0–59. (Default value used if this argument is not given: 0 .) |
second | a long integereger representing the second, with a range of 0–59. (Default value used if this argument is not given: 0 .) |
sign | a long integereger representing the sign of the offset (0 signifying + and 1 signifying - ). See the paragraph below for further explanations. (Default value used if this argument is not given: 0 .) |
hoursOffset | a long integereger representing the time zone's hour offset from GMT. (Default value used if this argument is not given: 0 .) |
minutesOffset | a long integereger representing the time zone's minute offset from GMT. (Default value used if this argument is not given: 0 .) |
To illustrate the time zone offset, a value of -05:00
would correspond to USA Eastern Standard Time. In the Date object, this would require a value of 1
for the sign field, 5
for the hour offset and 0
for the minutes offset.
parameter
= value
. This is not to be intepreted as a Python keyword argument; the use of a parameter name followed by an equals sign followed by a value is only meant to indicate a default value if the argument is not provided at all. It is not a keyword in the Python sense.Date(Date orig)
Copy constructor; creates a copy of this Date.
orig | the object to copy. |
def libsbml.Date.clone | ( | self | ) |
def libsbml.Date.getDateAsString | ( | self | ) |
Returns the current Date value in text-string form.
getDateAsString() string
The string returned will be in the W3C date format with time zone offset, used in RDF Dublin Core annotations within SBML.
2011
.1
represents January, and so on.T
.+
or -
.In the string format above, it is important not to forget the literal character T
in the string. Here is an example date/time string: 1997-07-16T19:20:30+01:00
, which would represent July 16, 1997, at 19:20:30 in Central European Time (which is UTC +1:00).
def libsbml.Date.getDay | ( | self | ) |
def libsbml.Date.getHour | ( | self | ) |
def libsbml.Date.getHoursOffset | ( | self | ) |
def libsbml.Date.getMinute | ( | self | ) |
def libsbml.Date.getMinutesOffset | ( | self | ) |
def libsbml.Date.getMonth | ( | self | ) |
def libsbml.Date.getSecond | ( | self | ) |
def libsbml.Date.getSignOffset | ( | self | ) |
def libsbml.Date.getYear | ( | self | ) |
def libsbml.Date.representsValidDate | ( | self | ) |
Returns True
or False
depending on whether this date object represents a valid date and time value.
representsValidDate() bool
This method verifies that the date/time value stored in this object is well-formed and represents plausible values. A time and date value in the W3C format takes the form YYYY-MM-DDThh:mm:ssXHH:ZZ (e.g., 1997-07-16T19:20:30+01:00
) where XHH:ZZ is the time zone offset. This method checks such things as whether the value of the month number is less than or equal to 12, whether the value of the minutes number is less than or equal to 59, whether a time zone offset is set, etc.
True
if the date is valid, False
otherwise. def libsbml.Date.setDateAsString | ( | self, | |
date | |||
) |
Sets the value of this Date object using a date and time value expressed as a text string.
setDateAsString(string date) int
This method expects its argument to be in the W3C date format with time zone offset, used in RDF Dublin Core annotations within SBML.
2011
.1
represents January, and so on.T
.+
or -
.In the string format above, it is important not to forget the literal character T
in the string. Here is an example date/time string: 1997-07-16T19:20:30+01:00
, which would represent July 16, 1997, at 19:20:30 in Central European Time (which is UTC +1:00).
If this method is given a None
argument or a string of length zero, it constructs a Date object with the value of January 1, 2000, at time 00:00 UTC. Otherwise, the argument must be in the complete format described above, or unpredictable results will happen.
date | a string representing the date. |
def libsbml.Date.setDay | ( | self, | |
day | |||
) |
Sets the value of the day of this Date object.
setDay(long day) int
day | a long integer representing the day; it must be in the range 0–31 or an error will be signaled. |
def libsbml.Date.setHour | ( | self, | |
hour | |||
) |
Sets the value of the hour of this Date object.
setHour(long hour) int
hour | a long integer representing the hour to set; it must be in the range 0–23 or an error will be signaled. |
def libsbml.Date.setHoursOffset | ( | self, | |
hoursOffset | |||
) |
Sets the value of this Date object's time zone hour offset.
setHoursOffset(long hoursOffset) int
hoursOffset | a long integer representing the hours of the offset; it must be in the range 0–12 or an error will be signaled. |
def libsbml.Date.setMinute | ( | self, | |
minute | |||
) |
Sets the value of the minute of this Date object.
setMinute(long minute) int
minute | a long integer representing the minute to set; it must be in the range 0–59 or an error will be signaled. |
def libsbml.Date.setMinutesOffset | ( | self, | |
minutesOffset | |||
) |
Sets the value of this Date object's time zone minutes offset.
setMinutesOffset(long minutesOffset) int
minutesOffset | a long integer representing the minutes of the offset; it must be in the range 0–59 or an error will be signaled. |
def libsbml.Date.setMonth | ( | self, | |
month | |||
) |
Sets the value of the month of this Date object.
setMonth(long month) int
month | a long integer representing the month; it must be in the range 1–12 or an error will be signaled. |
def libsbml.Date.setSecond | ( | self, | |
second | |||
) |
Sets the value of the second of the Date object.
setSecond(long second) int
second | a long integer representing the seconds; it must be in the range 0–59 or an error will be signaled. |
def libsbml.Date.setSignOffset | ( | self, | |
sign | |||
) |
Sets the value of the sign of the time zone offset of this Date object.
setSignOffset(long sign) int
The only permissible values are 0
and 1
.
sign | a long integer representing the sign of the offset, with 0 signifying + and 1 signifying - . |
def libsbml.Date.setYear | ( | self, | |
year | |||
) |
Sets the value of the year of this Date object.
setYear(long year) int
The value given as argument must be between 1000 and 9999 inclusive. (In the millennium during which this libSBML documentation is being written, a typical value is 2011
, but we hope that SBML will continue to be used for a long time.)
year | a long integer representing the year. |