libSBML Python API  5.18.0
libsbml Namespace Reference

Classes

class  AlgebraicRule
  An SBML algebraic rule representing 0 = f(W). More...
 
class  AssignmentRule
  An SBML assignment rule representing x = f(Y). More...
 
class  Association
 fbc Annotation helper class for “fbc” Version 1. More...
 
class  ASTNode
  Abstract Syntax Tree (AST) representation of a mathematical expression. More...
 
class  ASTNodeList
 Class for managing lists of ASTNode objects. More...
 
class  ASTNodeValues_t
 Proxy of C++ ASTNodeValues_t class. More...
 
class  AutoProperty
 Auto-detect Python class getX/setX methods. More...
 
class  BindingSiteSpeciesType
 multi Extension of MultiSpeciesType to define a binding site. More...
 
class  BoundingBox
 layout A bounding box for an item in a diagram. More...
 
class  Callback
 Proxy of C++ Callback class. More...
 
class  CobraToFbcConverter
 fbc COBRA to SBML Level 3 “fbc” converter. More...
 
class  ColorDefinition
 render Definition of an identifier for an RGBA color value. More...
 
class  Compartment
  An SBML compartment, where species are located. More...
 
class  CompartmentGlyph
 layout A glyph for an SBML compartment. More...
 
class  CompartmentReference
 multi Child of a Compartment that references a different Compartment. More...
 
class  CompartmentType
  A compartment type in SBML Level 2. More...
 
class  CompBase
 comp Convenience class for SBase-derived classes. More...
 
class  CompExtension
 comp Base extension class for the package. More...
 
class  CompFlatteningConverter
 comp 'Flattens' a model, removing composition. More...
 
class  CompModelPlugin
 comp Extension of Model. More...
 
class  CompPkgNamespaces
 comp SBMLNamespaces extension for the package. More...
 
class  CompSBasePlugin
 comp Extension of SBase. More...
 
class  CompSBMLDocumentPlugin
 comp Extension of SBMLDocument. More...
 
class  Constraint
  An SBML constraint, for stating validity assumptions. More...
 
class  ConversionOption
  A single configuration setting for an SBML converter. More...
 
class  ConversionProperties
  Set of configuration option values for a converter. More...
 
class  CubicBezier
 layout A Cubic Bézier smooth curve. More...
 
class  Curve
 layout A curve connecting elements in a diagram. More...
 
class  CVTerm
  A MIRIAM-compliant controlled vocabulary term. More...
 
class  CVTermList
 Class for managing lists of CVTerm objects. More...
 
class  Date
  A MIRIAM-compliant date representation. More...
 
class  DateList
 Class for managing lists of Date objects. More...
 
class  DefaultTerm
 qual The default result of a Transition. More...
 
class  DefaultValues
 render Encoding of default values. More...
 
class  DefinitionURLRegistry
  Registry of all libSBML SBML DefinitionURLs. More...
 
class  Delay
  A delay on the time of execution of an SBML event. More...
 
class  Deletion
 comp Deletion of an object from a submodel. More...
 
class  Dimensions
 layout Spatial dimensions of a 2D or 3D shape. More...
 
class  ElementFilter
  Base class for filter functions. More...
 
class  Ellipse
 render Graphical representation of an ellipse. More...
 
class  Event
  A discontinuous SBML event. More...
 
class  EventAssignment
  An assignment to a variable by an SBML event. More...
 
class  ExternalModelDefinition
 comp A reference to an externally-defined model. More...
 
class  FbcAnd
 fbc An “and” relationship for gene products More...
 
class  FbcAssociation
 fbc Base class for FbcAnd, FbcOr, and GeneProductRef More...
 
class  FbcExtension
 fbc Base extension class for the “fbc” package. More...
 
class  FbcModelPlugin
 fbc Extension of Model. More...
 
class  FbcOr
 fbc An “or” relationship for gene products More...
 
class  FbcPkgNamespaces
 fbc SBMLNamespaces extension for the package. More...
 
class  FbcReactionPlugin
 fbc Extension of Reaction by the “fbc” package. More...
 
class  FbcSBMLDocumentPlugin
 fbc Extension of SBMLDocument for the “fbc” package. More...
 
class  FbcSpeciesPlugin
 fbc Extension of Species. More...
 
class  FbcToCobraConverter
 fbc SBML Level 3 “fbc” to COBRA converter. More...
 
class  FbcV1ToV2Converter
 fbc Convert “fbc” Version 1 models to Version 2 More...
 
class  FbcV2ToV1Converter
 fbc Convert “fbc” Version 2 models to Version 1 More...
 
class  float_array
 Proxy of C++ float_array class. More...
 
class  FluxBound
 fbc Max or min value for a reaction flux. More...
 
class  FluxObjective
 fbc An objective function for a flux. More...
 
class  FunctionDefinition
  A user-defined function in an SBML model. More...
 
class  FunctionTerm
 qual A function term. More...
 
class  GeneAssociation
 fbc Annotation helper class for “fbc” Version 1. More...
 
class  GeneProduct
 fbc Association of a gene product with a Reaction More...
 
class  GeneProductAssociation
 fbc Association between gene products and reactions More...
 
class  GeneProductRef
 fbc Reference to a gene product of a reaction More...
 
class  GeneralGlyph
 layout A glyph for miscellaneous items. More...
 
class  GlobalRenderInformation
 render Render information stored in a ListOfLayouts. More...
 
class  GlobalStyle
 render A style that can be associated with a layout. More...
 
class  GradientBase
 render Abstract base class for linear and radial gradients. More...
 
class  GradientStop
 render A color at a certain location in a color gradient. More...
 
class  GraphicalObject
 layout Base class of objects that store layouts. More...
 
class  GraphicalPrimitive1D
 render Base class for graphical primitives implementing 1D attributes. More...
 
class  GraphicalPrimitive2D
 render Base class for graphical primitives implementing 2D attributes. More...
 
class  Group
 groups Representation of a group of SBML components. More...
 
class  GroupsExtension
 groups Base extension class for the package. More...
 
class  GroupsModelPlugin
 groups Extension of Model. More...
 
class  GroupsPkgNamespaces
 groups SBMLNamespaces extension for the package. More...
 
class  Image
 render Representation of images. More...
 
class  InitialAssignment
  An SBML initial assignment, evaluated once only. More...
 
class  Input
 qual The input to a QualitativeSpecies. More...
 
class  InSpeciesTypeBond
 multi Defines a bond within a MultiSpeciesType. More...
 
class  int_array
 Proxy of C++ int_array class. More...
 
class  IntraSpeciesReaction
 multi A subclass of Reaction for changes of an internal species bond. More...
 
class  KineticLaw
  The rate expression for an SBML reaction. More...
 
class  L3ParserSettings
  Controls the behavior of the Level 3 formula parser. More...
 
class  Layout
 layout The layout of a diagram of an SBML model. More...
 
class  LayoutExtension
 layout Base extension class for the package. More...
 
class  LayoutModelPlugin
 layout Extension of Model. More...
 
class  LayoutPkgNamespaces
 layout SBMLNamespaces extension for the package. More...
 
class  LayoutSpeciesReferencePlugin
 layout Extension of SpeciesReference. More...
 
class  LinearGradient
 render Representation of a linear gradient. More...
 
class  LineEnding
 render Decoration element for the start and/or end of curves. More...
 
class  LineSegment
 layout Representation of a line. More...
 
class  ListOf
  Parent class for libSBML's 'ListOfXYZ' classes. More...
 
class  ListOfColorDefinitions
 render A list of ColorDefinition objects. More...
 
class  ListOfCompartmentGlyphs
 layout A list of CompartmentGlyph objects. More...
 
class  ListOfCompartmentReferences
 multi A list of CompartmentReference objects. More...
 
class  ListOfCompartments
  A list of Compartment objects. More...
 
class  ListOfCompartmentTypes
  A list of CompartmentType objects. More...
 
class  ListOfConstraints
  A list of Constraint objects. More...
 
class  ListOfCurveElements
 render A list of curve elements. More...
 
class  ListOfDeletions
 comp A list of Deletion objects. More...
 
class  ListOfDrawables
 render A list of Transformation2D objects. More...
 
class  ListOfEventAssignments
  A list of EventAssignment objects. More...
 
class  ListOfEvents
  A list of Event objects. More...
 
class  ListOfExternalModelDefinitions
 comp A list of ExternalModelDefinition objects. More...
 
class  ListOfFbcAssociations
 fbc A list of FbcAssociation objects. More...
 
class  ListOfFluxBounds
 fbc A list of FluxBound objects. More...
 
class  ListOfFluxObjectives
 fbc A list of FluxObjective objects. More...
 
class  ListOfFunctionDefinitions
  A list of FunctionDefinition objects. More...
 
class  ListOfFunctionTerms
 qual A list of FunctionTerm objects. More...
 
class  ListOfGeneAssociations
 fbc A list of GeneAssociation objects. More...
 
class  ListOfGeneProducts
 fbc A list of GeneProduct objects. More...
 
class  ListOfGlobalRenderInformation
 render A list of GlobalRenderInformation objects. More...
 
class  ListOfGlobalStyles
 render A list of GlobalStyle objects. More...
 
class  ListOfGradientDefinitions
 render A list of GradientBase objects. More...
 
class  ListOfGradientStops
 render A list of one or more GradientStop objects. More...
 
class  ListOfGraphicalObjects
 layout A list of GraphicalObject objects. More...
 
class  ListOfGroups
 groups A list of Group objects. More...
 
class  ListOfInitialAssignments
  A list of InitialAssignment objects. More...
 
class  ListOfInputs
 qual A list of Input objects. More...
 
class  ListOfInSpeciesTypeBonds
 multi A list of InSpeciesTypeBond objects. More...
 
class  ListOfLayouts
 layout A list of Layout objects. More...
 
class  ListOfLineEndings
 render A list of LineEnding objects. More...
 
class  ListOfLineSegments
 layout A list of LineSegment objects. More...
 
class  ListOfLocalParameters
  A list of LocalParameter objects. More...
 
class  ListOfLocalRenderInformation
 render A list of LocalRenderInformation objects. More...
 
class  ListOfLocalStyles
 render A list of LocalStyle objects. More...
 
class  ListOfMembers
 groups A list of Member objects. More...
 
class  ListOfModelDefinitions
 comp A list of ModelDefinition objects. More...
 
class  ListOfMultiSpeciesTypes
 multi A list of MultiSpeciesType objects. More...
 
class  ListOfObjectives
 fbc A list of Objective objects. More...
 
class  ListOfOutputs
 qual A list of Output objects. More...
 
class  ListOfOutwardBindingSites
 multi A list of OutwardBindingSite objects. More...
 
class  ListOfParameters
  A list of Parameter objects. More...
 
class  ListOfPorts
 comp A list of Port objects. More...
 
class  ListOfPossibleSpeciesFeatureValues
 multi A list of PossibleSpeciesFeatureValue objects. More...
 
class  ListOfQualitativeSpecies
 qual A list of QualitativeSpecies objects. More...
 
class  ListOfReactionGlyphs
 layout A list of ReactionGlyph objects. More...
 
class  ListOfReactions
  A list of Reaction objects. More...
 
class  ListOfReferenceGlyphs
 layout A list of ReferenceGlyph objects. More...
 
class  ListOfReplacedElements
 comp A list of ReplacedElement objects. More...
 
class  ListOfRules
  A list of Rule objects. More...
 
class  ListOfSpecies
  A list of Species objects. More...
 
class  ListOfSpeciesFeatures
 multi A list of SpeciesFeature objects. More...
 
class  ListOfSpeciesFeatureTypes
 multi A list of SpeciesFeatureType objects. More...
 
class  ListOfSpeciesFeatureValues
 multi A list of SpeciesFeatureValue objects. More...
 
class  ListOfSpeciesGlyphs
 layout A list of SpeciesGlyph objects. More...
 
class  ListOfSpeciesReferenceGlyphs
 layout A list of SpeciesReferenceGlyph objects. More...
 
class  ListOfSpeciesReferences
  A list of SpeciesReference objects. More...
 
class  ListOfSpeciesTypeComponentIndexes
 multi A list of SpeciesTypeComponentIndex objects. More...
 
class  ListOfSpeciesTypeComponentMapInProducts
 multi A list of SpeciesTypeComponentMapInProduct objects. More...
 
class  ListOfSpeciesTypeInstances
 multi A list of SpeciesTypeInstance objects. More...
 
class  ListOfSpeciesTypes
  A list of SpeciesType objects. More...
 
class  ListOfSubmodels
 comp A list of Submodel objects. More...
 
class  ListOfTextGlyphs
 layout A list of TextGlyph objects. More...
 
class  ListOfTransitions
 qual A list of Transition objects. More...
 
class  ListOfUnitDefinitions
  A list of UnitDefinition objects. More...
 
class  ListOfUnits
  A list of Unit objects. More...
 
class  LocalParameter
  A parameter inside an SBML reaction definition. More...
 
class  LocalRenderInformation
 render Rendering information stored in Layouts. More...
 
class  LocalStyle
 render Style information object used in LocalRenderInformation. More...
 
class  Member
 groups The Member class defines what objects are parts of a Group. More...
 
class  Model
  An SBML model. More...
 
class  ModelCreator
  MIRIAM-compliant data about a model's creator. More...
 
class  ModelCreatorList
 Class for managing lists of ModelCreator objects. More...
 
class  ModelDefinition
 comp A model used in model composition. More...
 
class  ModelHistory
  MIRIAM-compliant data about a model's history. More...
 
class  ModifierSpeciesReference
  A reference to an SBML modifier species. More...
 
class  MultiASTPlugin
 multi Extension of ASTBasePlugin. More...
 
class  MultiCompartmentPlugin
 multi Extension of Compartment for the 'multi' package. More...
 
class  MultiExtension
 multi Base extension class for the package. More...
 
class  MultiListOfReactionsPlugin
 multi Extension of ListOfReactions for the 'multi' package. More...
 
class  MultiModelPlugin
 multi Extension of Model. More...
 
class  MultiPkgNamespaces
 multi SBMLNamespaces extension for the package. More...
 
class  MultiSBMLDocumentPlugin
 multi Extension of SBMLDocument for the 'multi' package. More...
 
class  MultiSimpleSpeciesReferencePlugin
 multi Extension of SimpleSpeciesReference for the 'multi' package. More...
 
class  MultiSpeciesPlugin
 multi Extension of Species for the 'multi' package. More...
 
class  MultiSpeciesReferencePlugin
 multi Extension of SpeciesReference for the 'multi' package. More...
 
class  MultiSpeciesType
 multi A type of Species in SBML Level 3 'multi' More...
 
class  Objective
 fbc An objective function. More...
 
class  ostream
 Wrapper class for the C++ standard stream ostream. More...
 
class  ostringstream
 Wrapper class for the C++ standard file stream ofstream. More...
 
class  Output
 qual The output from a QualitativeSpecies. More...
 
class  OutwardBindingSite
 multi Defines a outward-facing binding site for a MultiSpeciesType. More...
 
class  Parameter
  An SBML parameter: a named symbol with a value. More...
 
class  Point
 layout Representation of a point. More...
 
class  Polygon
 render Representation of a Polygon More...
 
class  Port
 comp An interface to be used in composition. More...
 
class  PossibleSpeciesFeatureValue
 multi Defines one value of a SpeciesFeature. More...
 
class  Priority
  The priority of execution of an SBML event. More...
 
class  PythonAPI2Warning
 Custom warning class for warnings generated by libSBML Python API2. More...
 
class  QualExtension
 qual Base extension class for the package. More...
 
class  QualitativeSpecies
 qual Extension of Species. More...
 
class  QualModelPlugin
 qual Extension of Model. More...
 
class  QualPkgNamespaces
 qual SBMLNamespaces extension for the package. More...
 
class  RadialGradient
 render Representation of a radial gradient. More...
 
class  RateRule
  An SBML rate rule representing dx/dt = f(Y). More...
 
class  RDFAnnotationParser
  MIRIAM-compliant RDF annotation reader/writer. More...
 
class  Reaction
  An SBML reaction between species in an SBML model. More...
 
class  ReactionGlyph
 layout A glyph for an SBML reaction. More...
 
class  Rectangle
 render Representation of a rectangle. More...
 
class  ReferenceGlyph
 layout Connection between an object and a glyph. More...
 
class  RelAbsVector
 render Vectors with an absolute value and a relative value. More...
 
class  RenderCubicBezier
 render Representation of cubic Bezier curves. More...
 
class  RenderCurve
 render Representation of curves. More...
 
class  RenderExtension
 render Base extension class for the package. More...
 
class  RenderGraphicalObjectPlugin
 render The Render extension of the layout GraphicalObject class. More...
 
class  RenderGroup
 render A group of graphical primitives creating a composite. More...
 
class  RenderInformationBase
 render Abstract base class for local and global rendering information. More...
 
class  RenderLayoutPlugin
 render LibSBML implementation for the extension to the Layout class by the Render extension. More...
 
class  RenderListOfLayoutsPlugin
 render A list of layout objects used by the 'render' extension. More...
 
class  RenderPkgNamespaces
  Set of SBML Level + Version + namespace triples. More...
 
class  RenderPoint
 render A point with both absolute and relative values More...
 
class  ReplacedBy
 comp Indicates an object replaced by another. More...
 
class  ReplacedElement
 comp Indicates an object replaces another. More...
 
class  Replacing
 comp Convenience class. More...
 
class  Rule
  Parent class for SBML rules in libSBML. More...
 
class  SBase
  SBML's SBase class, base class of most SBML objects. More...
 
class  SBaseList
 Class for managing lists of SBase objects. More...
 
class  SBasePlugin
  Base class for extending SBML objects in packages. More...
 
class  SBaseRef
 comp Base class for references to objects. More...
 
class  SBMLConverter
  Base class for SBML converters. More...
 
class  SBMLConverterRegistry
  Registry of all libSBML SBML converters. More...
 
class  SBMLDocument
  Overall SBML container object. More...
 
class  SBMLDocumentPlugin
  Base class for extending SBMLDocument in packages. More...
 
class  SBMLError
  An error, warning or other diagnostic. More...
 
class  SBMLErrorLog
  Log of diagnostics reported during processing. More...
 
class  SBMLExtension
  Base class for SBML Level 3 package plug-ins. More...
 
class  SBMLExtensionException
  Exception used by package extensions More...
 
class  SBMLExtensionRegistry
  Registry where package extensions are registered. More...
 
class  SBMLFileResolver
 comp Resolves documents stored on a file system. More...
 
class  SBMLFunctionDefinitionConverter
  Converter to expand user-defined functions in-line. More...
 
class  SBMLIdConverter
  Converter for replacing object identifiers. More...
 
class  SBMLInferUnitsConverter
  Converter for inferring and setting parameter units. More...
 
class  SBMLInitialAssignmentConverter
  Converter that removes SBML initial assignments. More...
 
class  SBMLLevel1Version1Converter
  Whole-document SBML Level/Version converter. More...
 
class  SBMLLevelVersionConverter
  Whole-document SBML Level/Version converter. More...
 
class  SBMLLocalParameterConverter
  Converter to turn local parameters into global ones. More...
 
class  SBMLNamespaces
  Set of SBML Level + Version + namespace triples. More...
 
class  SBMLNamespacesList
 Class for managing lists of SBMLNamespaces objects. More...
 
class  SBMLReactionConverter
  Converter to replace reactions with SBML rate rules. More...
 
class  SBMLReader
  File and text-string SBML reader. More...
 
class  SBMLResolver
 comp Base class for SBML resolvers. More...
 
class  SBMLResolverRegistry
 comp Registry of all SBML resolvers. More...
 
class  SBMLRuleConverter
  Converter that sorts SBML rules and assignments. More...
 
class  SBMLStripPackageConverter
  Converter that removes SBML Level 3 packages. More...
 
class  SBMLUnitsConverter
  Converts a model's existing units to SI units. More...
 
class  SBMLUri
 comp Utility class for handling URIs. More...
 
class  SBMLValidator
  Base class for SBML validators. More...
 
class  SBMLWriter
  File and text-string SBML writer. More...
 
class  SBO
  Facilities for using the Systems Biology Ontology. More...
 
class  SimpleSpeciesReference
  Abstract class for references to species in reactions. More...
 
class  Species
  An SBML species – a pool of entities. More...
 
class  SpeciesFeature
 multi Defines a feature of a multi Species. More...
 
class  SpeciesFeatureType
 multi Defines a template for referencing SpeciesFeature objects. More...
 
class  SpeciesFeatureValue
 multi Defines a particular value for a SpeciesFeature. More...
 
class  SpeciesGlyph
 layout A glyph for an SBML species. More...
 
class  SpeciesReference
  A reference to an SBML species in a reaction. More...
 
class  SpeciesReferenceGlyph
 layout A glyph for an SBML species reference. More...
 
class  SpeciesType
  A species type in SBML Level 2. More...
 
class  SpeciesTypeComponentIndex
 multi Identifies a component within a MultiSpeciesType. More...
 
class  SpeciesTypeComponentMapInProduct
 multi Distinguishes between components in reactants versus products. More...
 
class  SpeciesTypeInstance
 multi Allows construction of structured MultiSpeciesType objects. More...
 
class  StoichiometryMath
  Stochiometry expressions in SBML Level 2 reactions. More...
 
class  string
 Proxy of C++ std::basic_string<(char)> class.
 
class  StringSet
 Proxy of C++ std::set<(std::string)> class. More...
 
class  Style
 render Abstract base class for local and global styles. More...
 
class  SubListOfSpeciesFeatures
 multi Defines a set of SpeciesFeature objects. More...
 
class  Submodel
 comp A model instance inside another model. More...
 
class  SwigPyIterator
 Proxy of C++ swig::SwigPyIterator class.
 
class  SyntaxChecker
  Methods for checking the validity of SBML identifiers. More...
 
class  Text
 render Representation of text elements. More...
 
class  TextGlyph
 layout A glyph for a text label. More...
 
class  Transformation
 render Implementation of a 3D transformation matrix. More...
 
class  Transformation2D
 render Implementation of a 2D transformation matrix. More...
 
class  Transition
 qual A transition of a QualitativeSpecies. More...
 
class  Trigger
  The trigger expression for an SBML event. More...
 
class  Unit
  A single unit referenced in an SBML unit definition. More...
 
class  UnitDefinition
  A definition of a unit used in an SBML model. More...
 
class  XMLAttributes
  A list of attributes on an XML element. More...
 
class  XMLError
  XML-level errors, warnings and other diagnostics. More...
 
class  XMLErrorLog
  Log of diagnostics reported during XML processing. More...
 
class  XMLInputStream
  An interface to an XML input stream. More...
 
class  XMLNamespaces
  An XML Namespace. More...
 
class  XMLNode
  A node in libSBML's XML document tree. More...
 
class  XMLOutputStream
  Interface to an XML output stream. More...
 
class  XMLOwningOutputFileStream
 Proxy of C++ XMLOwningOutputFileStream class. More...
 
class  XMLOwningOutputStringStream
 Proxy of C++ XMLOwningOutputStringStream class. More...
 
class  XMLToken
  A token in an XML stream. More...
 
class  XMLTriple
  A qualified XML name. More...
 

Functions

def Association_parseInfixAssociation (association)
 Parses a gene association in infix format and returns a corresponding Association object. More...
 
def BindingStatus_fromString (s)
 
def BindingStatus_toString (bindingStatus)
 
def BiolQualifierType_fromString (s)
 This method takes a string and returns a biol qualifier representing the string. More...
 
def BiolQualifierType_toString (type)
 This method takes a biol qualifier type code and returns a string representing the code. More...
 
def CompBase_getParentModel (child)
 Returns the Model object to which the referenced child object belongs. More...
 
def CompExtension_getDefaultLevel ()
 Returns the default SBML Level used by this libSBML package extension. More...
 
def CompExtension_getDefaultPackageVersion ()
 Returns the default version of the SBML Level 3 package implemented by this libSBML extension. More...
 
def CompExtension_getDefaultVersion ()
 Returns the default SBML Version used by this libSBML package extension. More...
 
def CompExtension_getPackageName ()
 Returns the nickname of the SBML Level 3 package implemented by this libSBML extension. More...
 
def CompExtension_getXmlnsL3V1V1 ()
 Returns the XML namespace URI of the SBML Level 3 package implemented by this libSBML extension. More...
 
def DefinitionURLRegistry_addDefinitionURL (url, type)
 Adds the given DefinitionURL to the registry of SBML DefinitionURLs. More...
 
def DefinitionURLRegistry_addSBMLDefinitions ()
 
def DefinitionURLRegistry_clearDefinitions ()
 
def DefinitionURLRegistry_getCoreDefinitionsAdded ()
 
def DefinitionURLRegistry_getDefinitionUrlByIndex (index)
 
def DefinitionURLRegistry_getInstance ()
 Returns the singleton instance for the DefinitionURL registry. More...
 
def DefinitionURLRegistry_getNumDefinitionURLs ()
 Returns the number of DefinitionURLs known by the registry. More...
 
def DefinitionURLRegistry_getType (url)
 
def deleteLayoutAnnotation (pAnnotation)
 Takes an XMLNode and tries to find the layout annotation node and deletes it if it was found. More...
 
def deleteLayoutIdAnnotation (pAnnotation)
 Takes an XMLNode and tries to find the layoutId annotation node and deletes it if it was found. More...
 
def endl (args)
 Insert a newline character into the given C++ stream s. More...
 
def FbcAssociation_parseFbcInfixAssociation (association, plugin, usingId=False, addMissingGP=True)
 Parses a gene association in infix format and returns a corresponding Association object. More...
 
def FbcExtension_getDefaultLevel ()
 Returns the default SBML Level used by this libSBML package extension. More...
 
def FbcExtension_getDefaultPackageVersion ()
 Returns the default version of the SBML Level 3 package implemented by this libSBML extension. More...
 
def FbcExtension_getDefaultVersion ()
 Returns the default SBML Version used by this libSBML package extension. More...
 
def FbcExtension_getPackageName ()
 Returns the nickname of the SBML Level 3 package implemented by this libSBML extension. More...
 
def FbcExtension_getXmlnsL3V1V1 ()
 Returns the XML namespace URI of the SBML Level 3 package implemented by this libSBML extension. More...
 
def FbcExtension_getXmlnsL3V1V2 ()
 Returns the XML namespace URI of the SBML Level 3 package implemented by this libSBML extension. More...
 
def float_array_frompointer (t)
 
def flush (args)
 Flush the given C++ stream s. More...
 
def formulaToL3String (tree)
 Converts an AST to a string representation of a formula using a syntax derived from SBML Level 1, but extended to include elements from SBML Level 2 and SBML Level 3. More...
 
def formulaToL3StringWithSettings (tree, settings)
 Converts an AST to a string representation of a formula using a syntax basically derived from SBML Level 1, with behavior modifiable with custom settings. More...
 
def formulaToString (tree)
 Converts an AST to a string representation of a formula using a syntax basically derived from SBML Level 1. More...
 
def getDefaultL3ParserSettings ()
 Returns a copy of the default Level 3 ('L3') formula parser settings. More...
 
def getLastParseL3Error ()
 Returns the last error reported by the 'L3' mathematical formula parser. More...
 
def getLibSBMLDependencyVersionOf (option)
 Returns the version string for the dependency library used. More...
 
def getLibSBMLDottedVersion ()
 Returns the version number of this copy of libSBML as a string. More...
 
def getLibSBMLVersion ()
 Returns the version number of this copy of libSBML as an integer. More...
 
def getLibSBMLVersionString ()
 Returns the version number of this copy of libSBML as a string without periods. More...
 
def GroupKind_fromString (code)
 Returns the enumeration value corresponding to the given string or GROUP_KIND_UNKNOWN if there is no such match. More...
 
def GroupKind_isValid (gk)
 Predicate returning 1 (true) or 0 (false) depending on whether the given enumeration value is valid. More...
 
def GroupKind_isValidString (code)
 Predicate returning 1 (true) or 0 (false) depending on whether the given string is a valid enumeration value. More...
 
def GroupKind_toString (gk)
 Returns the string version of the provided enumeration value. More...
 
def GroupsExtension_getDefaultLevel ()
 Returns the default SBML Level implemented by this libSBML extension. More...
 
def GroupsExtension_getDefaultPackageVersion ()
 Returns the default version of the SBML Level 3 package implemented by this libSBML extension. More...
 
def GroupsExtension_getDefaultVersion ()
 Returns the default SBML Version implemented by this libSBML extension. More...
 
def GroupsExtension_getPackageName ()
 Returns the nickname of the SBML Level 3 package implemented by this libSBML extension. More...
 
def GroupsExtension_getXmlnsL3V1V1 ()
 Returns the XML namespace URI of the SBML Level 3 package implemented by this libSBML extension. More...
 
def int_array_frompointer (t)
 
def isLibSBMLCompiledWith (option)
 Returns an indication whether libSBML has been compiled with against a specific library. More...
 
def LayoutExtension_getDefaultLevel ()
 Returns the default SBML Level used by this libSBML package extension. More...
 
def LayoutExtension_getDefaultPackageVersion ()
 Returns the default version of the SBML Level 3 package implemented by this libSBML extension. More...
 
def LayoutExtension_getDefaultVersion ()
 Returns the default SBML Version used by this libSBML package extension. More...
 
def LayoutExtension_getPackageName ()
 Returns the nickname of the SBML Level 3 package implemented by this libSBML extension. More...
 
def LayoutExtension_getXmlnsL2 ()
 Returns the XML namespace URI of the SBML Level 2 version of the package implemented by this libSBML Extension. More...
 
def LayoutExtension_getXmlnsL3V1V1 ()
 Returns the XML namespace URI of the SBML Level 3 package implemented by this libSBML extension. More...
 
def LayoutExtension_getXmlnsXSI ()
 Returns the XML namespace URI of any additional XML namespaces needed or used by this SBML Level 3 package. More...
 
def ModelQualifierType_fromString (s)
 This method takes a string and returns a model qualifier representing the string. More...
 
def ModelQualifierType_toString (type)
 This method takes a model qualifier type code and returns a string representing the code. More...
 
def MultiExtension_getDefaultLevel ()
 Returns the default SBML Level used by this libSBML package extension. More...
 
def MultiExtension_getDefaultPackageVersion ()
 Returns the default version of the SBML Level 3 package implemented by this libSBML extension. More...
 
def MultiExtension_getDefaultVersion ()
 Returns the default SBML Version used by this libSBML package extension. More...
 
def MultiExtension_getPackageName ()
 Returns the nickname of the SBML Level 3 package implemented by this libSBML extension. More...
 
def MultiExtension_getXmlnsL3V1V1 ()
 Returns the XML namespace URI of the SBML Level 3 package implemented by this libSBML extension. More...
 
def OperationReturnValue_toString (returnValue)
 This method takes an SBML operation return value and returns a string representing the code. More...
 
def parseFormula (formula)
 Parses the given SBML formula and returns a representation of it as an Abstract Syntax Tree (AST). More...
 
def parseL3Formula (formula)
 Parses a text string as a mathematical formula and returns an AST representation of it. More...
 
def parseL3FormulaWithModel (formula, model)
 Parses a text string as a mathematical formula using a Model to resolve symbols, and returns an AST representation of the result. More...
 
def parseL3FormulaWithSettings (formula, settings)
 Parses a text string as a mathematical formula using specific parser settings and returns an AST representation of the result. More...
 
def parseLayoutAnnotation (annotation, layouts)
 
def parseLayoutId (sr)
 Creates an XMLNode that represents the layoutId annotation of the species reference from the given SpeciesReference object. More...
 
def parseLayouts (pModel)
 Creates an XMLNode that represents the layouts of the model from the given Model object. More...
 
def parseSpeciesReferenceAnnotation (annotation, sr)
 
def QualExtension_getDefaultLevel ()
 Returns the default SBML Level used by this libSBML package extension. More...
 
def QualExtension_getDefaultPackageVersion ()
 Returns the default version of the SBML Level 3 package implemented by this libSBML extension. More...
 
def QualExtension_getDefaultVersion ()
 Returns the default SBML Version used by this libSBML package extension. More...
 
def QualExtension_getPackageName ()
 Returns the nickname of the SBML Level 3 package implemented by this libSBML extension. More...
 
def QualExtension_getXmlnsL3V1V1 ()
 Returns the XML namespace URI of the SBML Level 3 package implemented by this libSBML extension. More...
 
def RDFAnnotationParser_createAnnotation ()
 Creates a blank annotation and returns its root XMLNode object. More...
 
def RDFAnnotationParser_createCVTerms (obj)
 Takes a list of CVTerm objects and creates a the RDF 'Description' element. More...
 
def RDFAnnotationParser_createRDFAnnotation (level=3, version=1)
 Creates a blank RDF element suitable for use in SBML annotations. More...
 
def RDFAnnotationParser_deleteRDFAnnotation (annotation)
 Deletes any SBML MIRIAM RDF annotation found in the given XMLNode tree and returns any remaining annotation content. More...
 
def RDFAnnotationParser_deleteRDFCVTermAnnotation (annotation)
 Deletes any SBML MIRIAM RDF 'CVTerm' annotation found in the given XMLNode tree and returns any remaining annotation content. More...
 
def RDFAnnotationParser_deleteRDFHistoryAnnotation (annotation)
 Deletes any SBML MIRIAM RDF 'History' annotation found in the given XMLNode tree and returns any remaining annotation content. More...
 
def RDFAnnotationParser_parseCVTerms (obj)
 Takes a list of CVTerm objects and creates a complete SBML annotation around it. More...
 
def RDFAnnotationParser_parseModelHistory (obj)
 Reads the model history and cvTerms stored in obj and creates the XML structure for an SBML annotation representing that metadata if there is a model history stored in obj. More...
 
def RDFAnnotationParser_parseOnlyModelHistory (obj)
 Reads the model history stored in obj and creates the XML structure for an SBML annotation representing that history. More...
 
def RDFAnnotationParser_parseRDFAnnotation (args)
 Parses an annotation (given as an XMLNode tree) into a list of CVTerm objects. More...
 
def readMathMLFromString (xml)
 Reads the MathML from the given XML string, constructs a corresponding abstract syntax tree, and returns a pointer to the root of the tree. More...
 
def readMathMLFromStringWithNamespaces (xml, xmlns)
 Reads the MathML from the given XML string, constructs a corresponding abstract syntax tree, and returns a pointer to the root of the tree. More...
 
def readSBML (filename)
 Reads an SBML document from the given file. More...
 
def readSBMLFromFile (filename)
 Reads an SBML document from the given file. More...
 
def readSBMLFromString (xml)
 Reads an SBML document from a text string. More...
 
def Relation_fromString (code)
 Returns the long enumeration corresponding to the given string or MULTI_RELATION_UNKNOWN if there is no such match. More...
 
def Relation_toString (r)
 Returns the string version of the provided long enumeration. More...
 
def RenderExtension_getDefaultLevel ()
 Returns the default SBML Level this extension. More...
 
def RenderExtension_getDefaultPackageVersion ()
 Returns the default SBML version this extension. More...
 
def RenderExtension_getDefaultVersion ()
 Returns the default SBML Version this extension. More...
 
def RenderExtension_getPackageName ()
 Returns the package name of this extension. More...
 
def RenderExtension_getXmlnsL2 ()
 Returns URI of L2 version of supported versions of this package. More...
 
def RenderExtension_getXmlnsL3V1V1 ()
 Returns URI of supported versions of this package. More...
 
def SBMLConverterRegistry_getInstance ()
 Returns the singleton instance for the converter registry. More...
 
def SBMLDocument_getDefaultLevel ()
 The default SBML Level of new SBMLDocument objects. More...
 
def SBMLDocument_getDefaultVersion ()
 The default Version of new SBMLDocument objects. More...
 
def SBMLExtensionRegistry_disablePackage (package)
 Disables the package with the given URI or name. More...
 
def SBMLExtensionRegistry_enablePackage (package)
 Enables the package with the given URI / name. More...
 
def SBMLExtensionRegistry_getAllRegisteredPackageNames ()
 Returns a list of registered packages. More...
 
def SBMLExtensionRegistry_getInstance ()
 Returns a singleton instance of the registry. More...
 
def SBMLExtensionRegistry_getNumRegisteredPackages ()
 Returns the number of registered packages. More...
 
def SBMLExtensionRegistry_getRegisteredPackageName (index)
 Returns the nth registered package. More...
 
def SBMLExtensionRegistry_isPackageEnabled (package)
 Returns True if the named package is enabled. More...
 
def SBMLNamespaces_freeSBMLNamespaces (supportedNS)
 Frees the list of supported namespaces as generated by getSupportedNamespaces(). More...
 
def SBMLNamespaces_getSBMLNamespaceURI (level, version)
 Returns a string representing the SBML XML namespace for the given level and version of SBML. More...
 
def SBMLNamespaces_getSupportedNamespaces ()
 Returns a list of all supported SBMLNamespaces in this version of libsbml. More...
 
def SBMLNamespaces_isSBMLNamespace (uri)
 Predicate returning True if the given URL is one of SBML XML namespaces. More...
 
def SBMLReader_hasBzip2 ()
 Static method; returns True if this copy of libSBML supports bzip2 format compression. More...
 
def SBMLReader_hasZlib ()
 Static method; returns True if this copy of libSBML supports gzip and zip format compression. More...
 
def SBMLResolverRegistry_deleteResolerRegistryInstance ()
 
def SBMLResolverRegistry_getInstance ()
 Returns the singleton instance for the resolver registry. More...
 
def SBMLTypeCode_toString (tc, pkgName)
 This method takes an SBML type code and returns a string representing the code. More...
 
def SBMLWriter_hasBzip2 ()
 Predicate returning True if this copy of libSBML has been linked with the bzip2 library. More...
 
def SBMLWriter_hasZlib ()
 Predicate returning True if this copy of libSBML has been linked with the zlib library. More...
 
def SBO_checkTerm (args)
 This method has multiple variants; they differ in the arguments they accept. More...
 
def SBO_intToString (sboTerm)
 Returns the integer as a correctly formatted SBO identifier string. More...
 
def SBO_isConservationLaw (term)
 Returns True if the given term identifier comes from the stated branch of SBO. More...
 
def SBO_isContinuousFramework (term)
 Returns True if the given term identifier comes from the stated branch of SBO. More...
 
def SBO_isDiscreteFramework (term)
 Returns True if the given term identifier comes from the stated branch of SBO. More...
 
def SBO_isEntity (term)
 Returns True if the given term identifier comes from the stated branch of SBO. More...
 
def SBO_isEvent (term)
 Returns True if the given term identifier comes from the stated branch of SBO. More...
 
def SBO_isFunctionalCompartment (term)
 Returns True if the given term identifier comes from the stated branch of SBO. More...
 
def SBO_isFunctionalEntity (term)
 Returns True if the given term identifier comes from the stated branch of SBO. More...
 
def SBO_isInteraction (term)
 Returns True if the given term identifier comes from the stated branch of SBO. More...
 
def SBO_isKineticConstant (term)
 Returns True if the given term identifier comes from the stated branch of SBO. More...
 
def SBO_isLogicalFramework (term)
 Returns True if the given term identifier comes from the stated branch of SBO. More...
 
def SBO_isMaterialEntity (term)
 Returns True if the given term identifier comes from the stated branch of SBO. More...
 
def SBO_isMathematicalExpression (term)
 Returns True if the given term identifier comes from the stated branch of SBO. More...
 
def SBO_isMetadataRepresentation (term)
 Returns True if the given term identifier comes from the stated branch of SBO. More...
 
def SBO_isModellingFramework (term)
 Returns True if the given term identifier comes from the stated branch of SBO. More...
 
def SBO_isModifier (term)
 Returns True if the given term identifier comes from the stated branch of SBO. More...
 
def SBO_isObselete (term)
 Predicate for checking whether the given term is obsolete. More...
 
def SBO_isOccurringEntityRepresentation (term)
 Returns True if the given term identifier comes from the stated branch of SBO. More...
 
def SBO_isParticipant (term)
 Returns True if the given term identifier comes from the stated branch of SBO. More...
 
def SBO_isParticipantRole (term)
 Returns True if the given term identifier comes from the stated branch of SBO. More...
 
def SBO_isPhysicalEntityRepresentation (term)
 Returns True if the given term identifier comes from the stated branch of SBO. More...
 
def SBO_isPhysicalParticipant (term)
 Returns True if the given term identifier comes from the stated branch of SBO. More...
 
def SBO_isProduct (term)
 Returns True if the given term identifier comes from the stated branch of SBO. More...
 
def SBO_isQuantitativeParameter (term)
 Returns True if the given term identifier comes from the stated branch of SBO. More...
 
def SBO_isQuantitativeSystemsDescriptionParameter (term)
 Returns True if the given term identifier comes from the stated branch of SBO. More...
 
def SBO_isRateLaw (term)
 Returns True if the given term identifier comes from the stated branch of SBO. More...
 
def SBO_isReactant (term)
 Returns True if the given term identifier comes from the stated branch of SBO. More...
 
def SBO_isSteadyStateExpression (term)
 Returns True if the given term identifier comes from the stated branch of SBO. More...
 
def SBO_isSystemsDescriptionParameter (term)
 Returns True if the given term identifier comes from the stated branch of SBO. More...
 
def SBO_stringToInt (sboTerm)
 Returns the string as a correctly formatted SBO integer portion. More...
 
def SpreadMethod_fromString (name)
 
def SpreadMethod_toString (method)
 
def Submodel_removeProcessingCallback (args)
 
def SyntaxChecker_hasExpectedXHTMLSyntax (xhtml, sbmlns=None)
 Returns True or False depending on whether the given XMLNode object contains valid XHTML content. More...
 
def SyntaxChecker_isValidSBMLSId (sid)
 Returns True or False depending on whether the argument string conforms to the syntax of SBML identifiers. More...
 
def SyntaxChecker_isValidUnitSId (units)
 Returns True or False depending on whether the argument string conforms to the syntax of SBML unit identifiers. More...
 
def SyntaxChecker_isValidXMLanyURI (uri)
 Returns True or False depending on whether the uri argument string conforms to the XML data type anyURI. More...
 
def SyntaxChecker_isValidXMLID (id)
 Returns True or False depending on whether the argument string conforms to the XML data type ID. More...
 
def TextAnchor_fromString (str)
 
def TextAnchor_toString (anchor)
 
def Transformation2D_getIdentityMatrix2D ()
 Returns a 2D identity matrix. More...
 
def Transformation_getIdentityMatrix ()
 Returns a 3D identity matrix. More...
 
def Unit_areEquivalent (unit1, unit2)
 Predicate returning True if Unit objects are equivalent. More...
 
def Unit_areIdentical (unit1, unit2)
 Predicate returning True if two Unit objects are identical. More...
 
def Unit_convertToSI (unit)
 Returns a UnitDefinition object containing the given unit converted to the appropriate SI unit. More...
 
def Unit_isBuiltIn (name, level)
 Predicate to test whether a given string is the name of a built-in SBML unit, depending on the SBML level, since new predefined units were added between level 2 versions 1 and 2, and then all predefined units were removed again in SBML Level 3. More...
 
def Unit_isUnitKind (name, level, version)
 Predicate to test whether a given string is the name of a valid base unit in SBML (such as 'gram' or 'mole'). More...
 
def Unit_merge (unit1, unit2)
 Merges two Unit objects with the same 'kind' attribute value into a single Unit. More...
 
def Unit_removeScale (unit)
 Manipulates the attributes of the Unit to express the unit with the value of the scale attribute reduced to zero. More...
 
def UnitDefinition_areEquivalent (ud1, ud2)
 Predicate returning True if two UnitDefinition objects are equivalent. More...
 
def UnitDefinition_areIdentical (ud1, ud2)
 Predicate returning True if two UnitDefinition objects are identical. More...
 
def UnitDefinition_combine (ud1, ud2)
 Combines two UnitDefinition objects into a single UnitDefinition. More...
 
def UnitDefinition_convertToSI (ud)
 Convert a given UnitDefinition into a new UnitDefinition object that uses SI units. More...
 
def UnitDefinition_divide (ud1, ud2)
 Combines two UnitDefinition objects into a single UnitDefinition as a division. More...
 
def UnitDefinition_printUnits (ud, compact=False)
 Expresses the given definition in a plain-text form. More...
 
def UnitDefinition_reorder (ud)
 Alphabetically orders the Unit objects within the ListOfUnits of a UnitDefinition. More...
 
def UnitDefinition_simplify (ud)
 Simplifies the UnitDefinition such that any given kind of Unit object occurs only once in the ListOfUnits. More...
 
def UnitKind_equals (uk1, uk2)
 Tests for logical equality between two given UNIT_KIND_ code values. More...
 
def UnitKind_forName (name)
 Converts a text string naming a kind of unit to its corresponding libSBML UNIT_KIND_ constant/enumeration value. More...
 
def UnitKind_isValidUnitKindString (str, level, version)
 Predicate for testing whether a given string corresponds to a predefined libSBML unit code. More...
 
def UnitKind_toString (uk)
 Converts a unit code to a text string equivalent. More...
 
def writeMathMLToString (node)
 Writes the given ASTNode (and its children) to a string as MathML, and returns the string. More...
 
def writeMathMLWithNamespaceToString (node, sbmlns)
 Writes the given AST node (and its children) to a string as MathML, and returns the string. More...
 
def writeSBML (d, filename)
 Writes the given SBML document d to the file named by filename. More...
 
def writeSBMLToFile (d, filename)
 Writes the given SBML document d to the file filename. More...
 
def writeSBMLToString (d)
 Writes the given SBML document d to an in-memory string and returns a pointer to it. More...
 
def XMLError_getStandardMessage (code)
 Returns a copy of the message string associated with the given predefined XMLError code. More...
 
def XMLNode_convertStringToXMLNode (xmlstr, xmlns=None)
 Returns an XMLNode which is derived from a string containing XML content. More...
 
def XMLNode_convertXMLNodeToString (node)
 Returns a string representation of a given XMLNode. More...
 
def XMLOutputStream_getLibraryName ()
 
def XMLOutputStream_getLibraryVersion ()
 
def XMLOutputStream_getWriteComment ()
 
def XMLOutputStream_getWriteTimestamp ()
 
def XMLOutputStream_setLibraryName (libraryName)
 sets the name of the library writing the XML More...
 
def XMLOutputStream_setLibraryVersion (libraryVersion)
 sets the name of the library writing the output More...
 
def XMLOutputStream_setWriteComment (writeComment)
 
def XMLOutputStream_setWriteTimestamp (writeTimestamp)
 

Variables

 ALLOWED_CHILDREN_ANY = _libsbml.ALLOWED_CHILDREN_ANY
 Extended math added in L3V2. More...
 
 ALLOWED_CHILDREN_ATLEAST = _libsbml.ALLOWED_CHILDREN_ATLEAST
 Extended math added by the 'distrib' package. More...
 
 ALLOWED_CHILDREN_EXACTLY = _libsbml.ALLOWED_CHILDREN_EXACTLY
 Extended math. More...
 
 ALLOWED_CHILDREN_UNKNOWN = _libsbml.ALLOWED_CHILDREN_UNKNOWN
 Unknown node: will not produce any MathML. More...
 
 AllowedAttributesOnAlgRule = _libsbml.AllowedAttributesOnAlgRule
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 AllowedAttributesOnAssignRule = _libsbml.AllowedAttributesOnAssignRule
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 AllowedAttributesOnCompartment = _libsbml.AllowedAttributesOnCompartment
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 AllowedAttributesOnConstraint = _libsbml.AllowedAttributesOnConstraint
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 AllowedAttributesOnDelay = _libsbml.AllowedAttributesOnDelay
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 AllowedAttributesOnEvent = _libsbml.AllowedAttributesOnEvent
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 AllowedAttributesOnEventAssignment = _libsbml.AllowedAttributesOnEventAssignment
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 AllowedAttributesOnFunc = _libsbml.AllowedAttributesOnFunc
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 AllowedAttributesOnInitialAssign = _libsbml.AllowedAttributesOnInitialAssign
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 AllowedAttributesOnKineticLaw = _libsbml.AllowedAttributesOnKineticLaw
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 AllowedAttributesOnListOfComps = _libsbml.AllowedAttributesOnListOfComps
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 AllowedAttributesOnListOfConstraints = _libsbml.AllowedAttributesOnListOfConstraints
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 AllowedAttributesOnListOfEventAssign = _libsbml.AllowedAttributesOnListOfEventAssign
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 AllowedAttributesOnListOfEvents = _libsbml.AllowedAttributesOnListOfEvents
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 AllowedAttributesOnListOfFuncs = _libsbml.AllowedAttributesOnListOfFuncs
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 AllowedAttributesOnListOfInitAssign = _libsbml.AllowedAttributesOnListOfInitAssign
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 AllowedAttributesOnListOfLocalParam = _libsbml.AllowedAttributesOnListOfLocalParam
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 AllowedAttributesOnListOfMods = _libsbml.AllowedAttributesOnListOfMods
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 AllowedAttributesOnListOfParams = _libsbml.AllowedAttributesOnListOfParams
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 AllowedAttributesOnListOfReactions = _libsbml.AllowedAttributesOnListOfReactions
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 AllowedAttributesOnListOfRules = _libsbml.AllowedAttributesOnListOfRules
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 AllowedAttributesOnListOfSpecies = _libsbml.AllowedAttributesOnListOfSpecies
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 AllowedAttributesOnListOfSpeciesRef = _libsbml.AllowedAttributesOnListOfSpeciesRef
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 AllowedAttributesOnListOfUnitDefs = _libsbml.AllowedAttributesOnListOfUnitDefs
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 AllowedAttributesOnListOfUnits = _libsbml.AllowedAttributesOnListOfUnits
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 AllowedAttributesOnLocalParameter = _libsbml.AllowedAttributesOnLocalParameter
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 AllowedAttributesOnModel = _libsbml.AllowedAttributesOnModel
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 AllowedAttributesOnModifier = _libsbml.AllowedAttributesOnModifier
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 AllowedAttributesOnParameter = _libsbml.AllowedAttributesOnParameter
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 AllowedAttributesOnPriority = _libsbml.AllowedAttributesOnPriority
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 AllowedAttributesOnRateRule = _libsbml.AllowedAttributesOnRateRule
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 AllowedAttributesOnReaction = _libsbml.AllowedAttributesOnReaction
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 AllowedAttributesOnSBML = _libsbml.AllowedAttributesOnSBML
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 AllowedAttributesOnSpecies = _libsbml.AllowedAttributesOnSpecies
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 AllowedAttributesOnSpeciesReference = _libsbml.AllowedAttributesOnSpeciesReference
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 AllowedAttributesOnTrigger = _libsbml.AllowedAttributesOnTrigger
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 AllowedAttributesOnUnit = _libsbml.AllowedAttributesOnUnit
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 AllowedAttributesOnUnitDefinition = _libsbml.AllowedAttributesOnUnitDefinition
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 AND_ASSOCIATION = _libsbml.AND_ASSOCIATION
 fbc One of the possible Association types. More...
 
 AnnotationNotElement = _libsbml.AnnotationNotElement
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 AnnotationNotesNotAllowedLevel1 = _libsbml.AnnotationNotesNotAllowedLevel1
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 ApplyCiMustBeModelComponent = _libsbml.ApplyCiMustBeModelComponent
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 ApplyCiMustBeUserFunction = _libsbml.ApplyCiMustBeUserFunction
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 ArgsToEqNeedSameType = _libsbml.ArgsToEqNeedSameType
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 AssignmentToConstantEntity = _libsbml.AssignmentToConstantEntity
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 AssignRuleCompartmentMismatch = _libsbml.AssignRuleCompartmentMismatch
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 AssignRuleParameterMismatch = _libsbml.AssignRuleParameterMismatch
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 AssignRuleSpeciesMismatch = _libsbml.AssignRuleSpeciesMismatch
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 AssignRuleStoichiometryMismatch = _libsbml.AssignRuleStoichiometryMismatch
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 AST_CONSTANT_E = _libsbml.AST_CONSTANT_E
 One of the possible ASTNode types. More...
 
 AST_CONSTANT_FALSE = _libsbml.AST_CONSTANT_FALSE
 One of the possible ASTNode types. More...
 
 AST_CONSTANT_PI = _libsbml.AST_CONSTANT_PI
 One of the possible ASTNode types. More...
 
 AST_CONSTANT_TRUE = _libsbml.AST_CONSTANT_TRUE
 One of the possible ASTNode types. More...
 
 AST_CSYMBOL_FUNCTION = _libsbml.AST_CSYMBOL_FUNCTION
 Enumeration marker for the possible ASTNode types. More...
 
 AST_DISTRIB_FUNCTION_BERNOULLI = _libsbml.AST_DISTRIB_FUNCTION_BERNOULLI
 Enumeration marker for the possible ASTNode types. More...
 
 AST_DISTRIB_FUNCTION_BINOMIAL = _libsbml.AST_DISTRIB_FUNCTION_BINOMIAL
 Enumeration marker for the possible ASTNode types. More...
 
 AST_DISTRIB_FUNCTION_CAUCHY = _libsbml.AST_DISTRIB_FUNCTION_CAUCHY
 Enumeration marker for the possible ASTNode types. More...
 
 AST_DISTRIB_FUNCTION_CHISQUARE = _libsbml.AST_DISTRIB_FUNCTION_CHISQUARE
 Enumeration marker for the possible ASTNode types. More...
 
 AST_DISTRIB_FUNCTION_EXPONENTIAL = _libsbml.AST_DISTRIB_FUNCTION_EXPONENTIAL
 Enumeration marker for the possible ASTNode types. More...
 
 AST_DISTRIB_FUNCTION_GAMMA = _libsbml.AST_DISTRIB_FUNCTION_GAMMA
 Enumeration marker for the possible ASTNode types. More...
 
 AST_DISTRIB_FUNCTION_LAPLACE = _libsbml.AST_DISTRIB_FUNCTION_LAPLACE
 Enumeration marker for the possible ASTNode types. More...
 
 AST_DISTRIB_FUNCTION_LOGNORMAL = _libsbml.AST_DISTRIB_FUNCTION_LOGNORMAL
 Enumeration marker for the possible ASTNode types. More...
 
 AST_DISTRIB_FUNCTION_NORMAL = _libsbml.AST_DISTRIB_FUNCTION_NORMAL
 Enumeration marker for the possible ASTNode types. More...
 
 AST_DISTRIB_FUNCTION_POISSON = _libsbml.AST_DISTRIB_FUNCTION_POISSON
 Enumeration marker for the possible ASTNode types. More...
 
 AST_DISTRIB_FUNCTION_RAYLEIGH = _libsbml.AST_DISTRIB_FUNCTION_RAYLEIGH
 Enumeration marker for the possible ASTNode types. More...
 
 AST_DISTRIB_FUNCTION_UNIFORM = _libsbml.AST_DISTRIB_FUNCTION_UNIFORM
 Enumeration marker for the possible ASTNode types. More...
 
 AST_DIVIDE = _libsbml.AST_DIVIDE
 One of the possible ASTNode types. More...
 
 AST_END_OF_CORE = _libsbml.AST_END_OF_CORE
 One of the possible ASTNode types. More...
 
 AST_FUNCTION = _libsbml.AST_FUNCTION
 One of the possible ASTNode types. More...
 
 AST_FUNCTION_ABS = _libsbml.AST_FUNCTION_ABS
 One of the possible ASTNode types. More...
 
 AST_FUNCTION_ARCCOS = _libsbml.AST_FUNCTION_ARCCOS
 One of the possible ASTNode types. More...
 
 AST_FUNCTION_ARCCOSH = _libsbml.AST_FUNCTION_ARCCOSH
 One of the possible ASTNode types. More...
 
 AST_FUNCTION_ARCCOT = _libsbml.AST_FUNCTION_ARCCOT
 One of the possible ASTNode types. More...
 
 AST_FUNCTION_ARCCOTH = _libsbml.AST_FUNCTION_ARCCOTH
 One of the possible ASTNode types. More...
 
 AST_FUNCTION_ARCCSC = _libsbml.AST_FUNCTION_ARCCSC
 One of the possible ASTNode types. More...
 
 AST_FUNCTION_ARCCSCH = _libsbml.AST_FUNCTION_ARCCSCH
 One of the possible ASTNode types. More...
 
 AST_FUNCTION_ARCSEC = _libsbml.AST_FUNCTION_ARCSEC
 One of the possible ASTNode types. More...
 
 AST_FUNCTION_ARCSECH = _libsbml.AST_FUNCTION_ARCSECH
 One of the possible ASTNode types. More...
 
 AST_FUNCTION_ARCSIN = _libsbml.AST_FUNCTION_ARCSIN
 One of the possible ASTNode types. More...
 
 AST_FUNCTION_ARCSINH = _libsbml.AST_FUNCTION_ARCSINH
 One of the possible ASTNode types. More...
 
 AST_FUNCTION_ARCTAN = _libsbml.AST_FUNCTION_ARCTAN
 One of the possible ASTNode types. More...
 
 AST_FUNCTION_ARCTANH = _libsbml.AST_FUNCTION_ARCTANH
 One of the possible ASTNode types. More...
 
 AST_FUNCTION_CEILING = _libsbml.AST_FUNCTION_CEILING
 One of the possible ASTNode types. More...
 
 AST_FUNCTION_COS = _libsbml.AST_FUNCTION_COS
 One of the possible ASTNode types. More...
 
 AST_FUNCTION_COSH = _libsbml.AST_FUNCTION_COSH
 One of the possible ASTNode types. More...
 
 AST_FUNCTION_COT = _libsbml.AST_FUNCTION_COT
 One of the possible ASTNode types. More...
 
 AST_FUNCTION_COTH = _libsbml.AST_FUNCTION_COTH
 One of the possible ASTNode types. More...
 
 AST_FUNCTION_CSC = _libsbml.AST_FUNCTION_CSC
 One of the possible ASTNode types. More...
 
 AST_FUNCTION_CSCH = _libsbml.AST_FUNCTION_CSCH
 One of the possible ASTNode types. More...
 
 AST_FUNCTION_DELAY = _libsbml.AST_FUNCTION_DELAY
 One of the possible ASTNode types. More...
 
 AST_FUNCTION_EXP = _libsbml.AST_FUNCTION_EXP
 One of the possible ASTNode types. More...
 
 AST_FUNCTION_FACTORIAL = _libsbml.AST_FUNCTION_FACTORIAL
 One of the possible ASTNode types. More...
 
 AST_FUNCTION_FLOOR = _libsbml.AST_FUNCTION_FLOOR
 One of the possible ASTNode types. More...
 
 AST_FUNCTION_LN = _libsbml.AST_FUNCTION_LN
 One of the possible ASTNode types. More...
 
 AST_FUNCTION_LOG = _libsbml.AST_FUNCTION_LOG
 One of the possible ASTNode types. More...
 
 AST_FUNCTION_MAX = _libsbml.AST_FUNCTION_MAX
 One of the possible ASTNode types. More...
 
 AST_FUNCTION_MIN = _libsbml.AST_FUNCTION_MIN
 One of the possible ASTNode types. More...
 
 AST_FUNCTION_PIECEWISE = _libsbml.AST_FUNCTION_PIECEWISE
 One of the possible ASTNode types. More...
 
 AST_FUNCTION_POWER = _libsbml.AST_FUNCTION_POWER
 One of the possible ASTNode types. More...
 
 AST_FUNCTION_QUOTIENT = _libsbml.AST_FUNCTION_QUOTIENT
 One of the possible ASTNode types. More...
 
 AST_FUNCTION_RATE_OF = _libsbml.AST_FUNCTION_RATE_OF
 One of the possible ASTNode types. More...
 
 AST_FUNCTION_REM = _libsbml.AST_FUNCTION_REM
 One of the possible ASTNode types. More...
 
 AST_FUNCTION_ROOT = _libsbml.AST_FUNCTION_ROOT
 One of the possible ASTNode types. More...
 
 AST_FUNCTION_SEC = _libsbml.AST_FUNCTION_SEC
 One of the possible ASTNode types. More...
 
 AST_FUNCTION_SECH = _libsbml.AST_FUNCTION_SECH
 One of the possible ASTNode types. More...
 
 AST_FUNCTION_SIN = _libsbml.AST_FUNCTION_SIN
 One of the possible ASTNode types. More...
 
 AST_FUNCTION_SINH = _libsbml.AST_FUNCTION_SINH
 One of the possible ASTNode types. More...
 
 AST_FUNCTION_TAN = _libsbml.AST_FUNCTION_TAN
 One of the possible ASTNode types. More...
 
 AST_FUNCTION_TANH = _libsbml.AST_FUNCTION_TANH
 One of the possible ASTNode types. More...
 
 AST_INTEGER = _libsbml.AST_INTEGER
 One of the possible ASTNode types. More...
 
 AST_LAMBDA = _libsbml.AST_LAMBDA
 One of the possible ASTNode types. More...
 
 AST_LINEAR_ALGEBRA_DETERMINANT = _libsbml.AST_LINEAR_ALGEBRA_DETERMINANT
 Enumeration marker for the possible ASTNode types. More...
 
 AST_LINEAR_ALGEBRA_MATRIX = _libsbml.AST_LINEAR_ALGEBRA_MATRIX
 Enumeration marker for the possible ASTNode types. More...
 
 AST_LINEAR_ALGEBRA_MATRIXROW = _libsbml.AST_LINEAR_ALGEBRA_MATRIXROW
 Enumeration marker for the possible ASTNode types. More...
 
 AST_LINEAR_ALGEBRA_OUTER_PRODUCT = _libsbml.AST_LINEAR_ALGEBRA_OUTER_PRODUCT
 Enumeration marker for the possible ASTNode types. More...
 
 AST_LINEAR_ALGEBRA_SCALAR_PRODUCT = _libsbml.AST_LINEAR_ALGEBRA_SCALAR_PRODUCT
 Enumeration marker for the possible ASTNode types. More...
 
 AST_LINEAR_ALGEBRA_SELECTOR = _libsbml.AST_LINEAR_ALGEBRA_SELECTOR
 Enumeration marker for the possible ASTNode types. More...
 
 AST_LINEAR_ALGEBRA_TRANSPOSE = _libsbml.AST_LINEAR_ALGEBRA_TRANSPOSE
 Enumeration marker for the possible ASTNode types. More...
 
 AST_LINEAR_ALGEBRA_VECTOR = _libsbml.AST_LINEAR_ALGEBRA_VECTOR
 Enumeration marker for the possible ASTNode types. More...
 
 AST_LINEAR_ALGEBRA_VECTOR_PRODUCT = _libsbml.AST_LINEAR_ALGEBRA_VECTOR_PRODUCT
 Enumeration marker for the possible ASTNode types. More...
 
 AST_LOGICAL_AND = _libsbml.AST_LOGICAL_AND
 One of the possible ASTNode types. More...
 
 AST_LOGICAL_EXISTS = _libsbml.AST_LOGICAL_EXISTS
 Enumeration marker for the possible ASTNode types. More...
 
 AST_LOGICAL_FORALL = _libsbml.AST_LOGICAL_FORALL
 Enumeration marker for the possible ASTNode types. More...
 
 AST_LOGICAL_IMPLIES = _libsbml.AST_LOGICAL_IMPLIES
 One of the possible ASTNode types. More...
 
 AST_LOGICAL_NOT = _libsbml.AST_LOGICAL_NOT
 One of the possible ASTNode types. More...
 
 AST_LOGICAL_OR = _libsbml.AST_LOGICAL_OR
 One of the possible ASTNode types. More...
 
 AST_LOGICAL_XOR = _libsbml.AST_LOGICAL_XOR
 One of the possible ASTNode types. More...
 
 AST_MINUS = _libsbml.AST_MINUS
 One of the possible ASTNode types. More...
 
 AST_NAME = _libsbml.AST_NAME
 One of the possible ASTNode types. More...
 
 AST_NAME_AVOGADRO = _libsbml.AST_NAME_AVOGADRO
 One of the possible ASTNode types. More...
 
 AST_NAME_TIME = _libsbml.AST_NAME_TIME
 One of the possible ASTNode types. More...
 
 AST_PLUS = _libsbml.AST_PLUS
 One of the possible ASTNode types. More...
 
 AST_POWER = _libsbml.AST_POWER
 One of the possible ASTNode types. More...
 
 AST_RATIONAL = _libsbml.AST_RATIONAL
 One of the possible ASTNode types. More...
 
 AST_REAL = _libsbml.AST_REAL
 One of the possible ASTNode types. More...
 
 AST_REAL_E = _libsbml.AST_REAL_E
 One of the possible ASTNode types. More...
 
 AST_RELATIONAL_EQ = _libsbml.AST_RELATIONAL_EQ
 One of the possible ASTNode types. More...
 
 AST_RELATIONAL_GEQ = _libsbml.AST_RELATIONAL_GEQ
 One of the possible ASTNode types. More...
 
 AST_RELATIONAL_GT = _libsbml.AST_RELATIONAL_GT
 One of the possible ASTNode types. More...
 
 AST_RELATIONAL_LEQ = _libsbml.AST_RELATIONAL_LEQ
 One of the possible ASTNode types. More...
 
 AST_RELATIONAL_LT = _libsbml.AST_RELATIONAL_LT
 One of the possible ASTNode types. More...
 
 AST_RELATIONAL_NEQ = _libsbml.AST_RELATIONAL_NEQ
 One of the possible ASTNode types. More...
 
 AST_SERIES_PRODUCT = _libsbml.AST_SERIES_PRODUCT
 Enumeration marker for the possible ASTNode types. More...
 
 AST_SERIES_SUM = _libsbml.AST_SERIES_SUM
 Enumeration marker for the possible ASTNode types. More...
 
 AST_STATISTICS_MEAN = _libsbml.AST_STATISTICS_MEAN
 Enumeration marker for the possible ASTNode types. More...
 
 AST_STATISTICS_MEDIAN = _libsbml.AST_STATISTICS_MEDIAN
 Enumeration marker for the possible ASTNode types. More...
 
 AST_STATISTICS_MODE = _libsbml.AST_STATISTICS_MODE
 Enumeration marker for the possible ASTNode types. More...
 
 AST_STATISTICS_MOMENT = _libsbml.AST_STATISTICS_MOMENT
 Enumeration marker for the possible ASTNode types. More...
 
 AST_STATISTICS_SDEV = _libsbml.AST_STATISTICS_SDEV
 Enumeration marker for the possible ASTNode types. More...
 
 AST_STATISTICS_VARIANCE = _libsbml.AST_STATISTICS_VARIANCE
 Enumeration marker for the possible ASTNode types. More...
 
 AST_TIMES = _libsbml.AST_TIMES
 One of the possible ASTNode types. More...
 
 AST_UNKNOWN = _libsbml.AST_UNKNOWN
 One of the possible SBML Rule object types. More...
 
 AvogadroNotSupported = _libsbml.AvogadroNotSupported
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 BadCsymbolDefinitionURLValue = _libsbml.BadCsymbolDefinitionURLValue
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 BadlyFormedXML = _libsbml.BadlyFormedXML
 A value in the enumeration of all the error and warning codes returned by the XML layer in libSBML. More...
 
 BadMathML = _libsbml.BadMathML
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 BadMathMLNodeType = _libsbml.BadMathMLNodeType
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 BadProcessingInstruction = _libsbml.BadProcessingInstruction
 A value in the enumeration of all the error and warning codes returned by the XML layer in libSBML. More...
 
 BadXMLAttribute = _libsbml.BadXMLAttribute
 A value in the enumeration of all the error and warning codes returned by the XML layer in libSBML. More...
 
 BadXMLAttributeValue = _libsbml.BadXMLAttributeValue
 A value in the enumeration of all the error and warning codes returned by the XML layer in libSBML. More...
 
 BadXMLComment = _libsbml.BadXMLComment
 A value in the enumeration of all the error and warning codes returned by the XML layer in libSBML. More...
 
 BadXMLDecl = _libsbml.BadXMLDecl
 A value in the enumeration of all the error and warning codes returned by the XML layer in libSBML. More...
 
 BadXMLDeclLocation = _libsbml.BadXMLDeclLocation
 A value in the enumeration of all the error and warning codes returned by the XML layer in libSBML. More...
 
 BadXMLDOCTYPE = _libsbml.BadXMLDOCTYPE
 A value in the enumeration of all the error and warning codes returned by the XML layer in libSBML. More...
 
 BadXMLDocumentStructure = _libsbml.BadXMLDocumentStructure
 A value in the enumeration of all the error and warning codes returned by the XML layer in libSBML. More...
 
 BadXMLIDRef = _libsbml.BadXMLIDRef
 A value in the enumeration of all the error and warning codes returned by the XML layer in libSBML. More...
 
 BadXMLIDValue = _libsbml.BadXMLIDValue
 A value in the enumeration of all the error and warning codes returned by the XML layer in libSBML. More...
 
 BadXMLPrefix = _libsbml.BadXMLPrefix
 A value in the enumeration of all the error and warning codes returned by the XML layer in libSBML. More...
 
 BadXMLPrefixValue = _libsbml.BadXMLPrefixValue
 A value in the enumeration of all the error and warning codes returned by the XML layer in libSBML. More...
 
 BIOLOGICAL_QUALIFIER = _libsbml.BIOLOGICAL_QUALIFIER
 One of the possible MIRIAM annotation types used by CVTerm. More...
 
 BooleanNumericDiscrepancy = _libsbml.BooleanNumericDiscrepancy
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 BooleanOpsNeedBooleanArgs = _libsbml.BooleanOpsNeedBooleanArgs
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 BothAmountAndConcentrationSet = _libsbml.BothAmountAndConcentrationSet
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 BothStoichiometryAndMath = _libsbml.BothStoichiometryAndMath
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 BQB_ENCODES = _libsbml.BQB_ENCODES
 One of the possible MIRIAM annotation types used by CVTerm. More...
 
 BQB_HAS_PART = _libsbml.BQB_HAS_PART
 One of the possible MIRIAM annotation types used by CVTerm. More...
 
 BQB_HAS_PROPERTY = _libsbml.BQB_HAS_PROPERTY
 One of the possible MIRIAM annotation types used by CVTerm. More...
 
 BQB_HAS_TAXON = _libsbml.BQB_HAS_TAXON
 One of the possible MIRIAM annotation types used by CVTerm. More...
 
 BQB_HAS_VERSION = _libsbml.BQB_HAS_VERSION
 One of the possible MIRIAM annotation types used by CVTerm. More...
 
 BQB_IS = _libsbml.BQB_IS
 One of the possible MIRIAM annotation types used by CVTerm. More...
 
 BQB_IS_DESCRIBED_BY = _libsbml.BQB_IS_DESCRIBED_BY
 One of the possible MIRIAM annotation types used by CVTerm. More...
 
 BQB_IS_ENCODED_BY = _libsbml.BQB_IS_ENCODED_BY
 One of the possible MIRIAM annotation types used by CVTerm. More...
 
 BQB_IS_HOMOLOG_TO = _libsbml.BQB_IS_HOMOLOG_TO
 One of the possible MIRIAM annotation types used by CVTerm. More...
 
 BQB_IS_PART_OF = _libsbml.BQB_IS_PART_OF
 One of the possible MIRIAM annotation types used by CVTerm. More...
 
 BQB_IS_PROPERTY_OF = _libsbml.BQB_IS_PROPERTY_OF
 One of the possible MIRIAM annotation types used by CVTerm. More...
 
 BQB_IS_VERSION_OF = _libsbml.BQB_IS_VERSION_OF
 One of the possible MIRIAM annotation types used by CVTerm. More...
 
 BQB_OCCURS_IN = _libsbml.BQB_OCCURS_IN
 One of the possible MIRIAM annotation types used by CVTerm. More...
 
 BQB_UNKNOWN = _libsbml.BQB_UNKNOWN
 One of the possible MIRIAM annotation types used by CVTerm. More...
 
 BQM_HAS_INSTANCE = _libsbml.BQM_HAS_INSTANCE
 One of the possible MIRIAM annotation types used by CVTerm. More...
 
 BQM_IS = _libsbml.BQM_IS
 One of the possible MIRIAM annotation types used by CVTerm. More...
 
 BQM_IS_DERIVED_FROM = _libsbml.BQM_IS_DERIVED_FROM
 One of the possible MIRIAM annotation types used by CVTerm. More...
 
 BQM_IS_DESCRIBED_BY = _libsbml.BQM_IS_DESCRIBED_BY
 One of the possible MIRIAM annotation types used by CVTerm. More...
 
 BQM_IS_INSTANCE_OF = _libsbml.BQM_IS_INSTANCE_OF
 One of the possible MIRIAM annotation types used by CVTerm. More...
 
 BQM_UNKNOWN = _libsbml.BQM_UNKNOWN
 One of the possible MIRIAM annotation types used by CVTerm. More...
 
 CannotConvertToL1V1 = _libsbml.CannotConvertToL1V1
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 CannotVerifyUnitsObjectNoMath = _libsbml.CannotVerifyUnitsObjectNoMath
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 CelsiusNoLongerValid = _libsbml.CelsiusNoLongerValid
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 CiCannotReference0DCompartment = _libsbml.CiCannotReference0DCompartment
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 CircularDependencyRateOf = _libsbml.CircularDependencyRateOf
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 CircularRuleDependency = _libsbml.CircularRuleDependency
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 CNV_TYPE_BOOL = _libsbml.CNV_TYPE_BOOL
 One of the possible ConversionOption data type indicators. More...
 
 CNV_TYPE_DOUBLE = _libsbml.CNV_TYPE_DOUBLE
 One of the possible ConversionOption data type indicators. More...
 
 CNV_TYPE_INT = _libsbml.CNV_TYPE_INT
 One of the possible ConversionOption data type indicators. More...
 
 CNV_TYPE_SINGLE = _libsbml.CNV_TYPE_SINGLE
 One of the possible ConversionOption data type indicators. More...
 
 CNV_TYPE_STRING = _libsbml.CNV_TYPE_STRING
 One of the possible ConversionOption data type indicators. More...
 
 CompartmentNotOnL1Reaction = _libsbml.CompartmentNotOnL1Reaction
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 CompartmentOnReaction = _libsbml.CompartmentOnReaction
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 CompartmentShouldHaveSize = _libsbml.CompartmentShouldHaveSize
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 CompartmentTypeNotValidAttribute = _libsbml.CompartmentTypeNotValidAttribute
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 CompartmentTypeNotValidComponent = _libsbml.CompartmentTypeNotValidComponent
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 CompAttributeRequiredMissing = _libsbml.CompAttributeRequiredMissing
 comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError. More...
 
 CompAttributeRequiredMustBeBoolean = _libsbml.CompAttributeRequiredMustBeBoolean
 comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError. More...
 
 CompAttributeRequiredMustBeTrue = _libsbml.CompAttributeRequiredMustBeTrue
 comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError. More...
 
 CompCircularExternalModelReference = _libsbml.CompCircularExternalModelReference
 comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError. More...
 
 CompDeletedReplacement = _libsbml.CompDeletedReplacement
 comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError. More...
 
 CompDeletionAllowedAttributes = _libsbml.CompDeletionAllowedAttributes
 comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError. More...
 
 CompDeletionMustReferenceObject = _libsbml.CompDeletionMustReferenceObject
 comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError. More...
 
 CompDeletionMustReferOnlyOneObject = _libsbml.CompDeletionMustReferOnlyOneObject
 comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError. More...
 
 CompDeprecatedDeleteFunction = _libsbml.CompDeprecatedDeleteFunction
 comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError. More...
 
 CompDeprecatedReplaceFunction = _libsbml.CompDeprecatedReplaceFunction
 comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError. More...
 
 CompDeprecatedSBaseRefSpelling = _libsbml.CompDeprecatedSBaseRefSpelling
 comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError. More...
 
 CompDuplicateComponentId = _libsbml.CompDuplicateComponentId
 comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError. More...
 
 CompElementNotInNs = _libsbml.CompElementNotInNs
 comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError. More...
 
 CompEmptyLOModelDefs = _libsbml.CompEmptyLOModelDefs
 comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError. More...
 
 CompEmptyLOReplacedElements = _libsbml.CompEmptyLOReplacedElements
 comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError. More...
 
 CompExtentConversionMustBeParameter = _libsbml.CompExtentConversionMustBeParameter
 comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError. More...
 
 CompExtModDefAllowedAttributes = _libsbml.CompExtModDefAllowedAttributes
 comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError. More...
 
 CompExtModDefAllowedCoreAttributes = _libsbml.CompExtModDefAllowedCoreAttributes
 comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError. More...
 
 CompExtModDefAllowedElements = _libsbml.CompExtModDefAllowedElements
 comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError. More...
 
 CompExtModDefBad = _libsbml.CompExtModDefBad
 comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError. More...
 
 CompExtModMd5DoesNotMatch = _libsbml.CompExtModMd5DoesNotMatch
 comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError. More...
 
 CompFlatModelNotValid = _libsbml.CompFlatModelNotValid
 comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError. More...
 
 CompFlatteningNotImplementedNotReqd = _libsbml.CompFlatteningNotImplementedNotReqd
 comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError. More...
 
 CompFlatteningNotImplementedReqd = _libsbml.CompFlatteningNotImplementedReqd
 comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError. More...
 
 CompFlatteningNotRecognisedNotReqd = _libsbml.CompFlatteningNotRecognisedNotReqd
 comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError. More...
 
 CompFlatteningNotRecognisedReqd = _libsbml.CompFlatteningNotRecognisedReqd
 comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError. More...
 
 CompFlatteningWarning = _libsbml.CompFlatteningWarning
 comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError. More...
 
 CompIdRefMayReferenceUnknownPackage = _libsbml.CompIdRefMayReferenceUnknownPackage
 comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError. More...
 
 CompIdRefMustReferenceObject = _libsbml.CompIdRefMustReferenceObject
 comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError. More...
 
 CompInvalidConversionFactorSyntax = _libsbml.CompInvalidConversionFactorSyntax
 comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError. More...
 
 CompInvalidDeletionSyntax = _libsbml.CompInvalidDeletionSyntax
 comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError. More...
 
 CompInvalidExtentConvFactorSyntax = _libsbml.CompInvalidExtentConvFactorSyntax
 comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError. More...
 
 CompInvalidIdRefSyntax = _libsbml.CompInvalidIdRefSyntax
 comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError. More...
 
 CompInvalidMD5Syntax = _libsbml.CompInvalidMD5Syntax
 comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError. More...
 
 CompInvalidMetaIdRefSyntax = _libsbml.CompInvalidMetaIdRefSyntax
 comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError. More...
 
 CompInvalidModelRefSyntax = _libsbml.CompInvalidModelRefSyntax
 comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError. More...
 
 CompInvalidNameSyntax = _libsbml.CompInvalidNameSyntax
 comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError. More...
 
 CompInvalidPortRefSyntax = _libsbml.CompInvalidPortRefSyntax
 comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError. More...
 
 CompInvalidSIdSyntax = _libsbml.CompInvalidSIdSyntax
 comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError. More...
 
 CompInvalidSourceSyntax = _libsbml.CompInvalidSourceSyntax
 comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError. More...
 
 CompInvalidSubmodelRefSyntax = _libsbml.CompInvalidSubmodelRefSyntax
 comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError. More...
 
 CompInvalidTimeConvFactorSyntax = _libsbml.CompInvalidTimeConvFactorSyntax
 comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError. More...
 
 CompInvalidUnitRefSyntax = _libsbml.CompInvalidUnitRefSyntax
 comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError. More...
 
 CompLineNumbersUnreliable = _libsbml.CompLineNumbersUnreliable
 comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError. More...
 
 CompLODeletionAllowedAttributes = _libsbml.CompLODeletionAllowedAttributes
 comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError. More...
 
 CompLODeletionsAllowedElements = _libsbml.CompLODeletionsAllowedElements
 comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError. More...
 
 CompLOExtModDefsAllowedAttributes = _libsbml.CompLOExtModDefsAllowedAttributes
 comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError. More...
 
 CompLOExtModelDefsAllowedElements = _libsbml.CompLOExtModelDefsAllowedElements
 comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError. More...
 
 CompLOModelDefsAllowedAttributes = _libsbml.CompLOModelDefsAllowedAttributes
 comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError. More...
 
 CompLOModelDefsAllowedElements = _libsbml.CompLOModelDefsAllowedElements
 comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError. More...
 
 CompLOPortsAllowedAttributes = _libsbml.CompLOPortsAllowedAttributes
 comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError. More...
 
 CompLOPortsAllowedElements = _libsbml.CompLOPortsAllowedElements
 comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError. More...
 
 CompLOReplacedElementsAllowedAttribs = _libsbml.CompLOReplacedElementsAllowedAttribs
 comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError. More...
 
 CompLOReplaceElementsAllowedElements = _libsbml.CompLOReplaceElementsAllowedElements
 comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError. More...
 
 CompLOSubmodelsAllowedAttributes = _libsbml.CompLOSubmodelsAllowedAttributes
 comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError. More...
 
 CompLOSubmodelsAllowedElements = _libsbml.CompLOSubmodelsAllowedElements
 comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError. More...
 
 CompMetaIdRefMayReferenceUnknownPkg = _libsbml.CompMetaIdRefMayReferenceUnknownPkg
 comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError. More...
 
 CompMetaIdRefMustReferenceObject = _libsbml.CompMetaIdRefMustReferenceObject
 comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError. More...
 
 CompModCannotCircularlyReferenceSelf = _libsbml.CompModCannotCircularlyReferenceSelf
 comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError. More...
 
 CompModelFlatteningFailed = _libsbml.CompModelFlatteningFailed
 comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError. More...
 
 CompModReferenceMustIdOfModel = _libsbml.CompModReferenceMustIdOfModel
 comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError. More...
 
 CompModReferenceSyntax = _libsbml.CompModReferenceSyntax
 comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError. More...
 
 CompMustReplaceIDs = _libsbml.CompMustReplaceIDs
 comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError. More...
 
 CompMustReplaceMetaIDs = _libsbml.CompMustReplaceMetaIDs
 comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError. More...
 
 CompMustReplacePackageIDs = _libsbml.CompMustReplacePackageIDs
 comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError. More...
 
 CompMustReplaceSameClass = _libsbml.CompMustReplaceSameClass
 comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError. More...
 
 CompNoEmptyListOfOnModel = _libsbml.CompNoEmptyListOfOnModel
 comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError. More...
 
 CompNoModelInReference = _libsbml.CompNoModelInReference
 comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError. More...
 
 CompNoMultipleReferences = _libsbml.CompNoMultipleReferences
 comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError. More...
 
 CompNSUndeclared = _libsbml.CompNSUndeclared
 comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError. More...
 
 CompOneListOfDeletionOnSubmodel = _libsbml.CompOneListOfDeletionOnSubmodel
 comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError. More...
 
 CompOneListOfExtModelDefinitions = _libsbml.CompOneListOfExtModelDefinitions
 comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError. More...
 
 CompOneListOfModelDefinitions = _libsbml.CompOneListOfModelDefinitions
 comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError. More...
 
 CompOneListOfOnModel = _libsbml.CompOneListOfOnModel
 comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError. More...
 
 CompOneListOfReplacedElements = _libsbml.CompOneListOfReplacedElements
 comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError. More...
 
 CompOneReplacedByElement = _libsbml.CompOneReplacedByElement
 comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError. More...
 
 CompOneSBaseRefOnly = _libsbml.CompOneSBaseRefOnly
 comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError. More...
 
 CompParentOfSBRefChildMustBeSubmodel = _libsbml.CompParentOfSBRefChildMustBeSubmodel
 comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError. More...
 
 CompPortAllowedAttributes = _libsbml.CompPortAllowedAttributes
 comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError. More...
 
 CompPortMustReferenceObject = _libsbml.CompPortMustReferenceObject
 comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError. More...
 
 CompPortMustReferenceOnlyOneObject = _libsbml.CompPortMustReferenceOnlyOneObject
 comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError. More...
 
 CompPortReferencesUnique = _libsbml.CompPortReferencesUnique
 comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError. More...
 
 CompPortRefMustReferencePort = _libsbml.CompPortRefMustReferencePort
 comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError. More...
 
 CompReferenceMustBeL3 = _libsbml.CompReferenceMustBeL3
 comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError. More...
 
 CompReplacedByAllowedAttributes = _libsbml.CompReplacedByAllowedAttributes
 comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError. More...
 
 CompReplacedByMustRefObject = _libsbml.CompReplacedByMustRefObject
 comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError. More...
 
 CompReplacedByMustRefOnlyOne = _libsbml.CompReplacedByMustRefOnlyOne
 comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError. More...
 
 CompReplacedBySubModelRef = _libsbml.CompReplacedBySubModelRef
 comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError. More...
 
 CompReplacedElementAllowedAttributes = _libsbml.CompReplacedElementAllowedAttributes
 comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError. More...
 
 CompReplacedElementConvFactorRef = _libsbml.CompReplacedElementConvFactorRef
 comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError. More...
 
 CompReplacedElementDeletionRef = _libsbml.CompReplacedElementDeletionRef
 comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError. More...
 
 CompReplacedElementMustRefObject = _libsbml.CompReplacedElementMustRefObject
 comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError. More...
 
 CompReplacedElementMustRefOnlyOne = _libsbml.CompReplacedElementMustRefOnlyOne
 comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError. More...
 
 CompReplacedElementNoDelAndConvFact = _libsbml.CompReplacedElementNoDelAndConvFact
 comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError. More...
 
 CompReplacedElementSameReference = _libsbml.CompReplacedElementSameReference
 comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError. More...
 
 CompReplacedElementSubModelRef = _libsbml.CompReplacedElementSubModelRef
 comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError. More...
 
 CompReplacedUnitsShouldMatch = _libsbml.CompReplacedUnitsShouldMatch
 comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError. More...
 
 CompRequiredFalseIfAllElementsReplaced = _libsbml.CompRequiredFalseIfAllElementsReplaced
 comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError. More...
 
 CompRequiredTrueIfElementsRemain = _libsbml.CompRequiredTrueIfElementsRemain
 comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError. More...
 
 CompSBaseRefMustReferenceObject = _libsbml.CompSBaseRefMustReferenceObject
 comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError. More...
 
 CompSBaseRefMustReferenceOnlyOneObject = _libsbml.CompSBaseRefMustReferenceOnlyOneObject
 comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError. More...
 
 CompSubmodelAllowedAttributes = _libsbml.CompSubmodelAllowedAttributes
 comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError. More...
 
 CompSubmodelAllowedCoreAttributes = _libsbml.CompSubmodelAllowedCoreAttributes
 comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError. More...
 
 CompSubmodelAllowedElements = _libsbml.CompSubmodelAllowedElements
 comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError. More...
 
 CompSubmodelCannotReferenceSelf = _libsbml.CompSubmodelCannotReferenceSelf
 comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError. More...
 
 CompSubmodelMustReferenceModel = _libsbml.CompSubmodelMustReferenceModel
 comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError. More...
 
 CompSubmodelNoEmptyLODeletions = _libsbml.CompSubmodelNoEmptyLODeletions
 comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError. More...
 
 CompTimeConversionMustBeParameter = _libsbml.CompTimeConversionMustBeParameter
 comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError. More...
 
 CompUniqueModelIds = _libsbml.CompUniqueModelIds
 comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError. More...
 
 CompUniquePortIds = _libsbml.CompUniquePortIds
 comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError. More...
 
 CompUnitRefMustReferenceUnitDef = _libsbml.CompUnitRefMustReferenceUnitDef
 comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError. More...
 
 CompUnknown = _libsbml.CompUnknown
 long More...
 
 CompUnresolvedReference = _libsbml.CompUnresolvedReference
 comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError. More...
 
 ConstantNotValidAttribute = _libsbml.ConstantNotValidAttribute
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 ConstantSpeciesNotValidAttribute = _libsbml.ConstantSpeciesNotValidAttribute
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 ConstraintContainsDOCTYPE = _libsbml.ConstraintContainsDOCTYPE
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 ConstraintContainsXMLDecl = _libsbml.ConstraintContainsXMLDecl
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 ConstraintMathNotBoolean = _libsbml.ConstraintMathNotBoolean
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 ConstraintNotInXHTMLNamespace = _libsbml.ConstraintNotInXHTMLNamespace
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 ConstraintNotValidComponent = _libsbml.ConstraintNotValidComponent
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 ConversionFactorMustConstant = _libsbml.ConversionFactorMustConstant
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 ConversionFactorNotInL1 = _libsbml.ConversionFactorNotInL1
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 ConversionFactorOnSpecies = _libsbml.ConversionFactorOnSpecies
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 ConvertibleMathInitialAssignment = _libsbml.ConvertibleMathInitialAssignment
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 DanglingUnitReference = _libsbml.DanglingUnitReference
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 DanglingUnitSIdRef = _libsbml.DanglingUnitSIdRef
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 DelayNeedsValuesFromTriggerTime = _libsbml.DelayNeedsValuesFromTriggerTime
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 DelayUnitsNotTime = _libsbml.DelayUnitsNotTime
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 DisallowedDefinitionURLUse = _libsbml.DisallowedDefinitionURLUse
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 DisallowedMathMLEncodingUse = _libsbml.DisallowedMathMLEncodingUse
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 DisallowedMathMLSymbol = _libsbml.DisallowedMathMLSymbol
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 DisallowedMathTypeAttributeUse = _libsbml.DisallowedMathTypeAttributeUse
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 DisallowedMathTypeAttributeValue = _libsbml.DisallowedMathTypeAttributeValue
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 DisallowedMathUnitsUse = _libsbml.DisallowedMathUnitsUse
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 DoubleExponentNotSupported = _libsbml.DoubleExponentNotSupported
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 DuplicateAnnotationInvalidInL2v2 = _libsbml.DuplicateAnnotationInvalidInL2v2
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 DuplicateAnnotationInvalidInL2v3 = _libsbml.DuplicateAnnotationInvalidInL2v3
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 DuplicateAnnotationInvalidInL2v4 = _libsbml.DuplicateAnnotationInvalidInL2v4
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 DuplicateAnnotationInvalidInL3v1 = _libsbml.DuplicateAnnotationInvalidInL3v1
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 DuplicateAnnotationNamespaces = _libsbml.DuplicateAnnotationNamespaces
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 DuplicateComponentId = _libsbml.DuplicateComponentId
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 DuplicateLocalParameterId = _libsbml.DuplicateLocalParameterId
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 DuplicateMetaId = _libsbml.DuplicateMetaId
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 DuplicateUnitDefinitionId = _libsbml.DuplicateUnitDefinitionId
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 DuplicateXMLAttribute = _libsbml.DuplicateXMLAttribute
 A value in the enumeration of all the error and warning codes returned by the XML layer in libSBML. More...
 
 EM_ARRAYS = _libsbml.EM_ARRAYS
 Extended math added by the 'arrays' package. More...
 
 EM_DISTRIB = _libsbml.EM_DISTRIB
 Extended math added by the 'distrib' package. More...
 
 EM_L3V2 = _libsbml.EM_L3V2
 Extended math added in l3v2. More...
 
 EM_UNKNOWN = _libsbml.EM_UNKNOWN
 Unknown node: will not produce any MathML. More...
 
 EmptyListElement = _libsbml.EmptyListElement
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 EmptyListInKineticLaw = _libsbml.EmptyListInKineticLaw
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 EmptyListInReaction = _libsbml.EmptyListInReaction
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 EmptyListOfElementNotSupported = _libsbml.EmptyListOfElementNotSupported
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 EmptyListOfUnits = _libsbml.EmptyListOfUnits
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 EmptyUnitListElement = _libsbml.EmptyUnitListElement
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 EventAndAssignmentRuleForId = _libsbml.EventAndAssignmentRuleForId
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 EventAssignCompartmentMismatch = _libsbml.EventAssignCompartmentMismatch
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 EventAssignmentForConstantEntity = _libsbml.EventAssignmentForConstantEntity
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 EventAssignParameterMismatch = _libsbml.EventAssignParameterMismatch
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 EventAssignSpeciesMismatch = _libsbml.EventAssignSpeciesMismatch
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 EventAssignStoichiometryMismatch = _libsbml.EventAssignStoichiometryMismatch
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 EventNotValidComponent = _libsbml.EventNotValidComponent
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 ExtentUnitsNotSubstance = _libsbml.ExtentUnitsNotSubstance
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 FailedMathMLReadOfDouble = _libsbml.FailedMathMLReadOfDouble
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 FailedMathMLReadOfExponential = _libsbml.FailedMathMLReadOfExponential
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 FailedMathMLReadOfInteger = _libsbml.FailedMathMLReadOfInteger
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 FailedMathMLReadOfRational = _libsbml.FailedMathMLReadOfRational
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 FastReactionsNotSupported = _libsbml.FastReactionsNotSupported
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 FbcActiveObjectiveRefersObjective = _libsbml.FbcActiveObjectiveRefersObjective
 fbc A value in the enumeration of all the error and warning codes generated by the libSBML “fbc” extension for objects of class SBMLError. More...
 
 FbcActiveObjectiveSyntax = _libsbml.FbcActiveObjectiveSyntax
 fbc A value in the enumeration of all the error and warning codes generated by the libSBML “fbc” extension for objects of class SBMLError. More...
 
 FbcAndAllowedCoreAttributes = _libsbml.FbcAndAllowedCoreAttributes
 fbc A value in the enumeration of all the error and warning codes generated by the libSBML “fbc” extension for objects of class SBMLError. More...
 
 FbcAndAllowedCoreElements = _libsbml.FbcAndAllowedCoreElements
 fbc A value in the enumeration of all the error and warning codes generated by the libSBML “fbc” extension for objects of class SBMLError. More...
 
 FbcAndTwoChildren = _libsbml.FbcAndTwoChildren
 fbc A value in the enumeration of all the error and warning codes generated by the libSBML “fbc” extension for objects of class SBMLError. More...
 
 FbcAttributeRequiredMissing = _libsbml.FbcAttributeRequiredMissing
 fbc A value in the enumeration of all the error and warning codes generated by the libSBML “fbc” extension for objects of class SBMLError. More...
 
 FbcAttributeRequiredMustBeBoolean = _libsbml.FbcAttributeRequiredMustBeBoolean
 fbc A value in the enumeration of all the error and warning codes generated by the libSBML “fbc” extension for objects of class SBMLError. More...
 
 FbcDuplicateComponentId = _libsbml.FbcDuplicateComponentId
 fbc A value in the enumeration of all the error and warning codes generated by the libSBML “fbc” extension for objects of class SBMLError. More...
 
 FbcElementNotInNs = _libsbml.FbcElementNotInNs
 fbc A value in the enumeration of all the error and warning codes generated by the libSBML “fbc” extension for objects of class SBMLError. More...
 
 FbcFluxBoundAllowedElements = _libsbml.FbcFluxBoundAllowedElements
 fbc A value in the enumeration of all the error and warning codes generated by the libSBML “fbc” extension for objects of class SBMLError. More...
 
 FbcFluxBoundAllowedL3Attributes = _libsbml.FbcFluxBoundAllowedL3Attributes
 fbc A value in the enumeration of all the error and warning codes generated by the libSBML “fbc” extension for objects of class SBMLError. More...
 
 FbcFluxBoundNameMustBeString = _libsbml.FbcFluxBoundNameMustBeString
 fbc A value in the enumeration of all the error and warning codes generated by the libSBML “fbc” extension for objects of class SBMLError. More...
 
 FbcFluxBoundOperationMustBeEnum = _libsbml.FbcFluxBoundOperationMustBeEnum
 fbc A value in the enumeration of all the error and warning codes generated by the libSBML “fbc” extension for objects of class SBMLError. More...
 
 FbcFluxBoundReactionMustExist = _libsbml.FbcFluxBoundReactionMustExist
 fbc A value in the enumeration of all the error and warning codes generated by the libSBML “fbc” extension for objects of class SBMLError. More...
 
 FbcFluxBoundRectionMustBeSIdRef = _libsbml.FbcFluxBoundRectionMustBeSIdRef
 fbc A value in the enumeration of all the error and warning codes generated by the libSBML “fbc” extension for objects of class SBMLError. More...
 
 FbcFluxBoundRequiredAttributes = _libsbml.FbcFluxBoundRequiredAttributes
 fbc A value in the enumeration of all the error and warning codes generated by the libSBML “fbc” extension for objects of class SBMLError. More...
 
 FbcFluxBoundsForReactionConflict = _libsbml.FbcFluxBoundsForReactionConflict
 fbc A value in the enumeration of all the error and warning codes generated by the libSBML “fbc” extension for objects of class SBMLError. More...
 
 FbcFluxBoundValueMustBeDouble = _libsbml.FbcFluxBoundValueMustBeDouble
 fbc A value in the enumeration of all the error and warning codes generated by the libSBML “fbc” extension for objects of class SBMLError. More...
 
 FbcFluxObjectAllowedElements = _libsbml.FbcFluxObjectAllowedElements
 fbc A value in the enumeration of all the error and warning codes generated by the libSBML “fbc” extension for objects of class SBMLError. More...
 
 FbcFluxObjectAllowedL3Attributes = _libsbml.FbcFluxObjectAllowedL3Attributes
 fbc A value in the enumeration of all the error and warning codes generated by the libSBML “fbc” extension for objects of class SBMLError. More...
 
 FbcFluxObjectCoefficientMustBeDouble = _libsbml.FbcFluxObjectCoefficientMustBeDouble
 fbc A value in the enumeration of all the error and warning codes generated by the libSBML “fbc” extension for objects of class SBMLError. More...
 
 FbcFluxObjectCoefficientWhenStrict = _libsbml.FbcFluxObjectCoefficientWhenStrict
 fbc A value in the enumeration of all the error and warning codes generated by the libSBML “fbc” extension for objects of class SBMLError. More...
 
 FbcFluxObjectNameMustBeString = _libsbml.FbcFluxObjectNameMustBeString
 fbc A value in the enumeration of all the error and warning codes generated by the libSBML “fbc” extension for objects of class SBMLError. More...
 
 FbcFluxObjectReactionMustBeSIdRef = _libsbml.FbcFluxObjectReactionMustBeSIdRef
 fbc A value in the enumeration of all the error and warning codes generated by the libSBML “fbc” extension for objects of class SBMLError. More...
 
 FbcFluxObjectReactionMustExist = _libsbml.FbcFluxObjectReactionMustExist
 fbc A value in the enumeration of all the error and warning codes generated by the libSBML “fbc” extension for objects of class SBMLError. More...
 
 FbcFluxObjectRequiredAttributes = _libsbml.FbcFluxObjectRequiredAttributes
 fbc A value in the enumeration of all the error and warning codes generated by the libSBML “fbc” extension for objects of class SBMLError. More...
 
 FbcGeneProdAssocAllowedAttribs = _libsbml.FbcGeneProdAssocAllowedAttribs
 fbc A value in the enumeration of all the error and warning codes generated by the libSBML “fbc” extension for objects of class SBMLError. More...
 
 FbcGeneProdAssocAllowedCoreAttribs = _libsbml.FbcGeneProdAssocAllowedCoreAttribs
 fbc A value in the enumeration of all the error and warning codes generated by the libSBML “fbc” extension for objects of class SBMLError. More...
 
 FbcGeneProdAssocAllowedCoreElements = _libsbml.FbcGeneProdAssocAllowedCoreElements
 fbc A value in the enumeration of all the error and warning codes generated by the libSBML “fbc” extension for objects of class SBMLError. More...
 
 FbcGeneProdAssocContainsOneElement = _libsbml.FbcGeneProdAssocContainsOneElement
 fbc A value in the enumeration of all the error and warning codes generated by the libSBML “fbc” extension for objects of class SBMLError. More...
 
 FbcGeneProdAssocIdSyntax = _libsbml.FbcGeneProdAssocIdSyntax
 fbc A value in the enumeration of all the error and warning codes generated by the libSBML “fbc” extension for objects of class SBMLError. More...
 
 FbcGeneProdAssocNameMustBeString = _libsbml.FbcGeneProdAssocNameMustBeString
 fbc A value in the enumeration of all the error and warning codes generated by the libSBML “fbc” extension for objects of class SBMLError. More...
 
 FbcGeneProdRefAllowedAttribs = _libsbml.FbcGeneProdRefAllowedAttribs
 fbc A value in the enumeration of all the error and warning codes generated by the libSBML “fbc” extension for objects of class SBMLError. More...
 
 FbcGeneProdRefAllowedCoreAttribs = _libsbml.FbcGeneProdRefAllowedCoreAttribs
 fbc A value in the enumeration of all the error and warning codes generated by the libSBML “fbc” extension for objects of class SBMLError. More...
 
 FbcGeneProdRefAllowedCoreElements = _libsbml.FbcGeneProdRefAllowedCoreElements
 fbc A value in the enumeration of all the error and warning codes generated by the libSBML “fbc” extension for objects of class SBMLError. More...
 
 FbcGeneProdRefGeneProductExists = _libsbml.FbcGeneProdRefGeneProductExists
 fbc A value in the enumeration of all the error and warning codes generated by the libSBML “fbc” extension for objects of class SBMLError. More...
 
 FbcGeneProdRefGeneProductSIdRef = _libsbml.FbcGeneProdRefGeneProductSIdRef
 fbc A value in the enumeration of all the error and warning codes generated by the libSBML “fbc” extension for objects of class SBMLError. More...
 
 FbcGeneProductAllowedAttributes = _libsbml.FbcGeneProductAllowedAttributes
 fbc A value in the enumeration of all the error and warning codes generated by the libSBML “fbc” extension for objects of class SBMLError. More...
 
 FbcGeneProductAllowedCoreAttributes = _libsbml.FbcGeneProductAllowedCoreAttributes
 fbc A value in the enumeration of all the error and warning codes generated by the libSBML “fbc” extension for objects of class SBMLError. More...
 
 FbcGeneProductAllowedCoreElements = _libsbml.FbcGeneProductAllowedCoreElements
 fbc A value in the enumeration of all the error and warning codes generated by the libSBML “fbc” extension for objects of class SBMLError. More...
 
 FbcGeneProductAssocSpeciesMustExist = _libsbml.FbcGeneProductAssocSpeciesMustExist
 fbc A value in the enumeration of all the error and warning codes generated by the libSBML “fbc” extension for objects of class SBMLError. More...
 
 FbcGeneProductLabelMustBeString = _libsbml.FbcGeneProductLabelMustBeString
 fbc A value in the enumeration of all the error and warning codes generated by the libSBML “fbc” extension for objects of class SBMLError. More...
 
 FbcGeneProductLabelMustBeUnique = _libsbml.FbcGeneProductLabelMustBeUnique
 fbc A value in the enumeration of all the error and warning codes generated by the libSBML “fbc” extension for objects of class SBMLError. More...
 
 FbcGeneProductNameMustBeString = _libsbml.FbcGeneProductNameMustBeString
 fbc A value in the enumeration of all the error and warning codes generated by the libSBML “fbc” extension for objects of class SBMLError. More...
 
 FbcLOFluxBoundsAllowedAttributes = _libsbml.FbcLOFluxBoundsAllowedAttributes
 fbc A value in the enumeration of all the error and warning codes generated by the libSBML “fbc” extension for objects of class SBMLError. More...
 
 FbcLOFluxBoundsAllowedElements = _libsbml.FbcLOFluxBoundsAllowedElements
 fbc A value in the enumeration of all the error and warning codes generated by the libSBML “fbc” extension for objects of class SBMLError. More...
 
 FbcLOGeneProductsAllowedAttributes = _libsbml.FbcLOGeneProductsAllowedAttributes
 fbc A value in the enumeration of all the error and warning codes generated by the libSBML “fbc” extension for objects of class SBMLError. More...
 
 FbcLOGeneProductsAllowedElements = _libsbml.FbcLOGeneProductsAllowedElements
 fbc A value in the enumeration of all the error and warning codes generated by the libSBML “fbc” extension for objects of class SBMLError. More...
 
 FbcLOObjectivesAllowedAttributes = _libsbml.FbcLOObjectivesAllowedAttributes
 fbc A value in the enumeration of all the error and warning codes generated by the libSBML “fbc” extension for objects of class SBMLError. More...
 
 FbcLOObjectivesAllowedElements = _libsbml.FbcLOObjectivesAllowedElements
 fbc A value in the enumeration of all the error and warning codes generated by the libSBML “fbc” extension for objects of class SBMLError. More...
 
 FbcModelMustHaveStrict = _libsbml.FbcModelMustHaveStrict
 fbc A value in the enumeration of all the error and warning codes generated by the libSBML “fbc” extension for objects of class SBMLError. More...
 
 FbcModelStrictMustBeBoolean = _libsbml.FbcModelStrictMustBeBoolean
 fbc A value in the enumeration of all the error and warning codes generated by the libSBML “fbc” extension for objects of class SBMLError. More...
 
 FbcNoEmptyListOfs = _libsbml.FbcNoEmptyListOfs
 fbc A value in the enumeration of all the error and warning codes generated by the libSBML “fbc” extension for objects of class SBMLError. More...
 
 FbcNSUndeclared = _libsbml.FbcNSUndeclared
 fbc A value in the enumeration of all the error and warning codes generated by the libSBML “fbc” extension for objects of class SBMLError. More...
 
 FbcObjectiveAllowedElements = _libsbml.FbcObjectiveAllowedElements
 fbc A value in the enumeration of all the error and warning codes generated by the libSBML “fbc” extension for objects of class SBMLError. More...
 
 FbcObjectiveAllowedL3Attributes = _libsbml.FbcObjectiveAllowedL3Attributes
 fbc A value in the enumeration of all the error and warning codes generated by the libSBML “fbc” extension for objects of class SBMLError. More...
 
 FbcObjectiveLOFluxObjAllowedAttribs = _libsbml.FbcObjectiveLOFluxObjAllowedAttribs
 fbc A value in the enumeration of all the error and warning codes generated by the libSBML “fbc” extension for objects of class SBMLError. More...
 
 FbcObjectiveLOFluxObjMustNotBeEmpty = _libsbml.FbcObjectiveLOFluxObjMustNotBeEmpty
 fbc A value in the enumeration of all the error and warning codes generated by the libSBML “fbc” extension for objects of class SBMLError. More...
 
 FbcObjectiveLOFluxObjOnlyFluxObj = _libsbml.FbcObjectiveLOFluxObjOnlyFluxObj
 fbc A value in the enumeration of all the error and warning codes generated by the libSBML “fbc” extension for objects of class SBMLError. More...
 
 FbcObjectiveNameMustBeString = _libsbml.FbcObjectiveNameMustBeString
 fbc A value in the enumeration of all the error and warning codes generated by the libSBML “fbc” extension for objects of class SBMLError. More...
 
 FbcObjectiveOneListOfObjectives = _libsbml.FbcObjectiveOneListOfObjectives
 fbc A value in the enumeration of all the error and warning codes generated by the libSBML “fbc” extension for objects of class SBMLError. More...
 
 FbcObjectiveRequiredAttributes = _libsbml.FbcObjectiveRequiredAttributes
 fbc A value in the enumeration of all the error and warning codes generated by the libSBML “fbc” extension for objects of class SBMLError. More...
 
 FbcObjectiveTypeMustBeEnum = _libsbml.FbcObjectiveTypeMustBeEnum
 fbc A value in the enumeration of all the error and warning codes generated by the libSBML “fbc” extension for objects of class SBMLError. More...
 
 FbcOnlyOneEachListOf = _libsbml.FbcOnlyOneEachListOf
 fbc A value in the enumeration of all the error and warning codes generated by the libSBML “fbc” extension for objects of class SBMLError. More...
 
 FbcOrAllowedCoreAttributes = _libsbml.FbcOrAllowedCoreAttributes
 fbc A value in the enumeration of all the error and warning codes generated by the libSBML “fbc” extension for objects of class SBMLError. More...
 
 FbcOrAllowedCoreElements = _libsbml.FbcOrAllowedCoreElements
 fbc A value in the enumeration of all the error and warning codes generated by the libSBML “fbc” extension for objects of class SBMLError. More...
 
 FbcOrTwoChildren = _libsbml.FbcOrTwoChildren
 fbc A value in the enumeration of all the error and warning codes generated by the libSBML “fbc” extension for objects of class SBMLError. More...
 
 FbcReactionAllowedAttributes = _libsbml.FbcReactionAllowedAttributes
 fbc A value in the enumeration of all the error and warning codes generated by the libSBML “fbc” extension for objects of class SBMLError. More...
 
 FbcReactionBoundsMustHaveValuesStrict = _libsbml.FbcReactionBoundsMustHaveValuesStrict
 fbc A value in the enumeration of all the error and warning codes generated by the libSBML “fbc” extension for objects of class SBMLError. More...
 
 FbcReactionBoundsNotAssignedStrict = _libsbml.FbcReactionBoundsNotAssignedStrict
 fbc A value in the enumeration of all the error and warning codes generated by the libSBML “fbc” extension for objects of class SBMLError. More...
 
 FbcReactionConstantBoundsStrict = _libsbml.FbcReactionConstantBoundsStrict
 fbc A value in the enumeration of all the error and warning codes generated by the libSBML “fbc” extension for objects of class SBMLError. More...
 
 FbcReactionLwrBoundNotInfStrict = _libsbml.FbcReactionLwrBoundNotInfStrict
 fbc A value in the enumeration of all the error and warning codes generated by the libSBML “fbc” extension for objects of class SBMLError. More...
 
 FbcReactionLwrBoundRefExists = _libsbml.FbcReactionLwrBoundRefExists
 fbc A value in the enumeration of all the error and warning codes generated by the libSBML “fbc” extension for objects of class SBMLError. More...
 
 FbcReactionLwrBoundSIdRef = _libsbml.FbcReactionLwrBoundSIdRef
 fbc A value in the enumeration of all the error and warning codes generated by the libSBML “fbc” extension for objects of class SBMLError. More...
 
 FbcReactionLwrLessThanUpStrict = _libsbml.FbcReactionLwrLessThanUpStrict
 fbc A value in the enumeration of all the error and warning codes generated by the libSBML “fbc” extension for objects of class SBMLError. More...
 
 FbcReactionMustHaveBoundsStrict = _libsbml.FbcReactionMustHaveBoundsStrict
 fbc A value in the enumeration of all the error and warning codes generated by the libSBML “fbc” extension for objects of class SBMLError. More...
 
 FbcReactionOnlyOneGeneProdAss = _libsbml.FbcReactionOnlyOneGeneProdAss
 fbc A value in the enumeration of all the error and warning codes generated by the libSBML “fbc” extension for objects of class SBMLError. More...
 
 FbcReactionUpBoundNotNegInfStrict = _libsbml.FbcReactionUpBoundNotNegInfStrict
 fbc A value in the enumeration of all the error and warning codes generated by the libSBML “fbc” extension for objects of class SBMLError. More...
 
 FbcReactionUpBoundRefExists = _libsbml.FbcReactionUpBoundRefExists
 fbc A value in the enumeration of all the error and warning codes generated by the libSBML “fbc” extension for objects of class SBMLError. More...
 
 FbcReactionUpBoundSIdRef = _libsbml.FbcReactionUpBoundSIdRef
 fbc A value in the enumeration of all the error and warning codes generated by the libSBML “fbc” extension for objects of class SBMLError. More...
 
 FbcRequiredFalse = _libsbml.FbcRequiredFalse
 fbc A value in the enumeration of all the error and warning codes generated by the libSBML “fbc” extension for objects of class SBMLError. More...
 
 FbcSBMLSIdSyntax = _libsbml.FbcSBMLSIdSyntax
 fbc A value in the enumeration of all the error and warning codes generated by the libSBML “fbc” extension for objects of class SBMLError. More...
 
 FbcSpeciesAllowedL3Attributes = _libsbml.FbcSpeciesAllowedL3Attributes
 fbc A value in the enumeration of all the error and warning codes generated by the libSBML “fbc” extension for objects of class SBMLError. More...
 
 FbcSpeciesChargeMustBeInteger = _libsbml.FbcSpeciesChargeMustBeInteger
 fbc A value in the enumeration of all the error and warning codes generated by the libSBML “fbc” extension for objects of class SBMLError. More...
 
 FbcSpeciesFormulaMustBeString = _libsbml.FbcSpeciesFormulaMustBeString
 fbc A value in the enumeration of all the error and warning codes generated by the libSBML “fbc” extension for objects of class SBMLError. More...
 
 FbcSpeciesReferenceConstantStrict = _libsbml.FbcSpeciesReferenceConstantStrict
 fbc A value in the enumeration of all the error and warning codes generated by the libSBML “fbc” extension for objects of class SBMLError. More...
 
 FbcSpeciesRefNotAssignedStrict = _libsbml.FbcSpeciesRefNotAssignedStrict
 fbc A value in the enumeration of all the error and warning codes generated by the libSBML “fbc” extension for objects of class SBMLError. More...
 
 FbcSpeciesRefsStoichMustBeRealStrict = _libsbml.FbcSpeciesRefsStoichMustBeRealStrict
 fbc A value in the enumeration of all the error and warning codes generated by the libSBML “fbc” extension for objects of class SBMLError. More...
 
 FbcUnknown = _libsbml.FbcUnknown
 long More...
 
 FILL_RULE_EVENODD = _libsbml.FILL_RULE_EVENODD
 render A value in an enumeration defined by the libSBML “render” extension to implement functionality for the SBML Level 3 Render package. More...
 
 FILL_RULE_INHERIT = _libsbml.FILL_RULE_INHERIT
 render A value in an enumeration defined by the libSBML “render” extension to implement functionality for the SBML Level 3 Render package. More...
 
 FILL_RULE_INVALID = _libsbml.FILL_RULE_INVALID
 render A value in an enumeration defined by the libSBML “render” extension to implement functionality for the SBML Level 3 Render package. More...
 
 FILL_RULE_NONZERO = _libsbml.FILL_RULE_NONZERO
 render A value in an enumeration defined by the libSBML “render” extension to implement functionality for the SBML Level 3 Render package. More...
 
 FILL_RULE_UNSET = _libsbml.FILL_RULE_UNSET
 render A value in an enumeration defined by the libSBML “render” extension to implement functionality for the SBML Level 3 Render package. More...
 
 FLUXBOUND_OPERATION_EQUAL = _libsbml.FLUXBOUND_OPERATION_EQUAL
 fbc One of the possible FluxBound operation types. More...
 
 FLUXBOUND_OPERATION_GREATER = _libsbml.FLUXBOUND_OPERATION_GREATER
 fbc One of the possible FluxBound operation types. More...
 
 FLUXBOUND_OPERATION_GREATER_EQUAL = _libsbml.FLUXBOUND_OPERATION_GREATER_EQUAL
 fbc One of the possible FluxBound operation types. More...
 
 FLUXBOUND_OPERATION_LESS = _libsbml.FLUXBOUND_OPERATION_LESS
 fbc One of the possible FluxBound operation types. More...
 
 FLUXBOUND_OPERATION_LESS_EQUAL = _libsbml.FLUXBOUND_OPERATION_LESS_EQUAL
 long More...
 
 FLUXBOUND_OPERATION_UNKNOWN = _libsbml.FLUXBOUND_OPERATION_UNKNOWN
 
 FONT_FAMILY_INVALID = _libsbml.FONT_FAMILY_INVALID
 render A value in an enumeration defined by the libSBML “render” extension to implement functionality for the SBML Level 3 Render package. More...
 
 FONT_FAMILY_MONOSPACE = _libsbml.FONT_FAMILY_MONOSPACE
 render A value in an enumeration defined by the libSBML “render” extension to implement functionality for the SBML Level 3 Render package. More...
 
 FONT_FAMILY_SANS_SERIF = _libsbml.FONT_FAMILY_SANS_SERIF
 render A value in an enumeration defined by the libSBML “render” extension to implement functionality for the SBML Level 3 Render package. More...
 
 FONT_FAMILY_SERIF = _libsbml.FONT_FAMILY_SERIF
 render A value in an enumeration defined by the libSBML “render” extension to implement functionality for the SBML Level 3 Render package. More...
 
 FONT_STYLE_INVALID = _libsbml.FONT_STYLE_INVALID
 render A value in an enumeration defined by the libSBML “render” extension to implement functionality for the SBML Level 3 Render package. More...
 
 FONT_STYLE_ITALIC = _libsbml.FONT_STYLE_ITALIC
 render A value in an enumeration defined by the libSBML “render” extension to implement functionality for the SBML Level 3 Render package. More...
 
 FONT_STYLE_NORMAL = _libsbml.FONT_STYLE_NORMAL
 render A value in an enumeration defined by the libSBML “render” extension to implement functionality for the SBML Level 3 Render package. More...
 
 FONT_STYLE_UNSET = _libsbml.FONT_STYLE_UNSET
 render A value in an enumeration defined by the libSBML “render” extension to implement functionality for the SBML Level 3 Render package. More...
 
 FONT_WEIGHT_BOLD = _libsbml.FONT_WEIGHT_BOLD
 render A value in an enumeration defined by the libSBML “render” extension to implement functionality for the SBML Level 3 Render package. More...
 
 FONT_WEIGHT_INVALID = _libsbml.FONT_WEIGHT_INVALID
 render A value in an enumeration defined by the libSBML “render” extension to implement functionality for the SBML Level 3 Render package. More...
 
 FONT_WEIGHT_NORMAL = _libsbml.FONT_WEIGHT_NORMAL
 render A value in an enumeration defined by the libSBML “render” extension to implement functionality for the SBML Level 3 Render package. More...
 
 FONT_WEIGHT_UNSET = _libsbml.FONT_WEIGHT_UNSET
 render A value in an enumeration defined by the libSBML “render” extension to implement functionality for the SBML Level 3 Render package. More...
 
 FormulaInLevel1KL = _libsbml.FormulaInLevel1KL
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 FuncDefNotValidComponent = _libsbml.FuncDefNotValidComponent
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 FunctionDefMathNotLambda = _libsbml.FunctionDefMathNotLambda
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 GENE_ASSOCIATION = _libsbml.GENE_ASSOCIATION
 fbc One of the possible Association types. More...
 
 GeneralWarningNotSpecified = _libsbml.GeneralWarningNotSpecified
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 GlobalUnitsNotDeclared = _libsbml.GlobalUnitsNotDeclared
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 GRADIENT_SPREAD_METHOD_INVALID = _libsbml.GRADIENT_SPREAD_METHOD_INVALID
 render A value in an enumeration defined by the libSBML “render” extension to implement functionality for the SBML Level 3 Render package. More...
 
 GRADIENT_SPREADMETHOD_PAD = _libsbml.GRADIENT_SPREADMETHOD_PAD
 render A value in an enumeration defined by the libSBML “render” extension to implement functionality for the SBML Level 3 Render package. More...
 
 GRADIENT_SPREADMETHOD_REFLECT = _libsbml.GRADIENT_SPREADMETHOD_REFLECT
 render A value in an enumeration defined by the libSBML “render” extension to implement functionality for the SBML Level 3 Render package. More...
 
 GRADIENT_SPREADMETHOD_REPEAT = _libsbml.GRADIENT_SPREADMETHOD_REPEAT
 render A value in an enumeration defined by the libSBML “render” extension to implement functionality for the SBML Level 3 Render package. More...
 
 GROUP_KIND_CLASSIFICATION = _libsbml.GROUP_KIND_CLASSIFICATION
 long More...
 
 GROUP_KIND_COLLECTION = _libsbml.GROUP_KIND_COLLECTION
 groups One of the possible Group kinds. More...
 
 GROUP_KIND_PARTONOMY = _libsbml.GROUP_KIND_PARTONOMY
 groups One of the possible Group kinds. More...
 
 GROUP_KIND_UNKNOWN = _libsbml.GROUP_KIND_UNKNOWN
 groups Unrecognized Group kind. More...
 
 GroupsAttributeRequiredMissing = _libsbml.GroupsAttributeRequiredMissing
 groups A value in the enumeration of all the error and warning codes generated by the libSBML “groups” extension for objects of class SBMLError. More...
 
 GroupsAttributeRequiredMustBeBoolean = _libsbml.GroupsAttributeRequiredMustBeBoolean
 groups A value in the enumeration of all the error and warning codes generated by the libSBML “groups” extension for objects of class SBMLError. More...
 
 GroupsAttributeRequiredMustHaveValue = _libsbml.GroupsAttributeRequiredMustHaveValue
 groups A value in the enumeration of all the error and warning codes generated by the libSBML “groups” extension for objects of class SBMLError. More...
 
 GroupsDuplicateComponentId = _libsbml.GroupsDuplicateComponentId
 groups A value in the enumeration of all the error and warning codes generated by the libSBML “groups” extension for objects of class SBMLError. More...
 
 GroupsElementNotInNs = _libsbml.GroupsElementNotInNs
 groups A value in the enumeration of all the error and warning codes generated by the libSBML “groups” extension for objects of class SBMLError. More...
 
 GroupsGroupAllowedAttributes = _libsbml.GroupsGroupAllowedAttributes
 groups A value in the enumeration of all the error and warning codes generated by the libSBML “groups” extension for objects of class SBMLError. More...
 
 GroupsGroupAllowedCoreAttributes = _libsbml.GroupsGroupAllowedCoreAttributes
 groups A value in the enumeration of all the error and warning codes generated by the libSBML “groups” extension for objects of class SBMLError. More...
 
 GroupsGroupAllowedCoreElements = _libsbml.GroupsGroupAllowedCoreElements
 groups A value in the enumeration of all the error and warning codes generated by the libSBML “groups” extension for objects of class SBMLError. More...
 
 GroupsGroupAllowedElements = _libsbml.GroupsGroupAllowedElements
 groups A value in the enumeration of all the error and warning codes generated by the libSBML “groups” extension for objects of class SBMLError. More...
 
 GroupsGroupEmptyLOElements = _libsbml.GroupsGroupEmptyLOElements
 groups A value in the enumeration of all the error and warning codes generated by the libSBML “groups” extension for objects of class SBMLError. More...
 
 GroupsGroupKindMustBeGroupKindEnum = _libsbml.GroupsGroupKindMustBeGroupKindEnum
 groups A value in the enumeration of all the error and warning codes generated by the libSBML “groups” extension for objects of class SBMLError. More...
 
 GroupsGroupLOMembersAllowedAttributes = _libsbml.GroupsGroupLOMembersAllowedAttributes
 groups A value in the enumeration of all the error and warning codes generated by the libSBML “groups” extension for objects of class SBMLError. More...
 
 GroupsGroupLOMembersAllowedCoreAttributes = _libsbml.GroupsGroupLOMembersAllowedCoreAttributes
 groups A value in the enumeration of all the error and warning codes generated by the libSBML “groups” extension for objects of class SBMLError. More...
 
 GroupsGroupLOMembersAllowedCoreElements = _libsbml.GroupsGroupLOMembersAllowedCoreElements
 groups A value in the enumeration of all the error and warning codes generated by the libSBML “groups” extension for objects of class SBMLError. More...
 
 GroupsGroupNameMustBeString = _libsbml.GroupsGroupNameMustBeString
 groups A value in the enumeration of all the error and warning codes generated by the libSBML “groups” extension for objects of class SBMLError. More...
 
 GroupsIdSyntaxRule = _libsbml.GroupsIdSyntaxRule
 groups A value in the enumeration of all the error and warning codes generated by the libSBML “groups” extension for objects of class SBMLError. More...
 
 GroupsLOMembersConsistentReferences = _libsbml.GroupsLOMembersConsistentReferences
 groups A value in the enumeration of all the error and warning codes generated by the libSBML “groups” extension for objects of class SBMLError. More...
 
 GroupsLOMembersNameMustBeString = _libsbml.GroupsLOMembersNameMustBeString
 groups A value in the enumeration of all the error and warning codes generated by the libSBML “groups” extension for objects of class SBMLError. More...
 
 GroupsMemberAllowedAttributes = _libsbml.GroupsMemberAllowedAttributes
 groups A value in the enumeration of all the error and warning codes generated by the libSBML “groups” extension for objects of class SBMLError. More...
 
 GroupsMemberAllowedCoreAttributes = _libsbml.GroupsMemberAllowedCoreAttributes
 groups A value in the enumeration of all the error and warning codes generated by the libSBML “groups” extension for objects of class SBMLError. More...
 
 GroupsMemberAllowedCoreElements = _libsbml.GroupsMemberAllowedCoreElements
 groups A value in the enumeration of all the error and warning codes generated by the libSBML “groups” extension for objects of class SBMLError. More...
 
 GroupsMemberIdRefMustBeSBase = _libsbml.GroupsMemberIdRefMustBeSBase
 groups A value in the enumeration of all the error and warning codes generated by the libSBML “groups” extension for objects of class SBMLError. More...
 
 GroupsMemberIdRefMustBeSId = _libsbml.GroupsMemberIdRefMustBeSId
 groups A value in the enumeration of all the error and warning codes generated by the libSBML “groups” extension for objects of class SBMLError. More...
 
 GroupsMemberMetaIdRefMustBeID = _libsbml.GroupsMemberMetaIdRefMustBeID
 groups A value in the enumeration of all the error and warning codes generated by the libSBML “groups” extension for objects of class SBMLError. More...
 
 GroupsMemberMetaIdRefMustBeSBase = _libsbml.GroupsMemberMetaIdRefMustBeSBase
 groups A value in the enumeration of all the error and warning codes generated by the libSBML “groups” extension for objects of class SBMLError. More...
 
 GroupsMemberNameMustBeString = _libsbml.GroupsMemberNameMustBeString
 groups A value in the enumeration of all the error and warning codes generated by the libSBML “groups” extension for objects of class SBMLError. More...
 
 GroupsModelAllowedElements = _libsbml.GroupsModelAllowedElements
 groups A value in the enumeration of all the error and warning codes generated by the libSBML “groups” extension for objects of class SBMLError. More...
 
 GroupsModelEmptyLOElements = _libsbml.GroupsModelEmptyLOElements
 groups A value in the enumeration of all the error and warning codes generated by the libSBML “groups” extension for objects of class SBMLError. More...
 
 GroupsModelLOGroupsAllowedCoreAttributes = _libsbml.GroupsModelLOGroupsAllowedCoreAttributes
 groups A value in the enumeration of all the error and warning codes generated by the libSBML “groups” extension for objects of class SBMLError. More...
 
 GroupsModelLOGroupsAllowedCoreElements = _libsbml.GroupsModelLOGroupsAllowedCoreElements
 groups A value in the enumeration of all the error and warning codes generated by the libSBML “groups” extension for objects of class SBMLError. More...
 
 GroupsNotCircularReferences = _libsbml.GroupsNotCircularReferences
 groups A value in the enumeration of all the error and warning codes generated by the libSBML “groups” extension for objects of class SBMLError. More...
 
 GroupsNSUndeclared = _libsbml.GroupsNSUndeclared
 groups A value in the enumeration of all the error and warning codes generated by the libSBML “groups” extension for objects of class SBMLError. More...
 
 GroupsUnknown = _libsbml.GroupsUnknown
 long More...
 
 H_TEXTANCHOR_END = _libsbml.H_TEXTANCHOR_END
 render A value in an enumeration defined by the libSBML “render” extension to implement functionality for the SBML Level 3 Render package. More...
 
 H_TEXTANCHOR_INVALID = _libsbml.H_TEXTANCHOR_INVALID
 render A value in an enumeration defined by the libSBML “render” extension to implement functionality for the SBML Level 3 Render package. More...
 
 H_TEXTANCHOR_MIDDLE = _libsbml.H_TEXTANCHOR_MIDDLE
 render A value in an enumeration defined by the libSBML “render” extension to implement functionality for the SBML Level 3 Render package. More...
 
 H_TEXTANCHOR_START = _libsbml.H_TEXTANCHOR_START
 render A value in an enumeration defined by the libSBML “render” extension to implement functionality for the SBML Level 3 Render package. More...
 
 H_TEXTANCHOR_UNSET = _libsbml.H_TEXTANCHOR_UNSET
 render A value in an enumeration defined by the libSBML “render” extension to implement functionality for the SBML Level 3 Render package. More...
 
 HasOnlySubsNoSpatialUnits = _libsbml.HasOnlySubsNoSpatialUnits
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 HasOnlySubstanceUnitsNotinL1 = _libsbml.HasOnlySubstanceUnitsNotinL1
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 HasOnlySubsUnitsNotValidAttribute = _libsbml.HasOnlySubsUnitsNotValidAttribute
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 IdNameSBaseInL3V2 = _libsbml.IdNameSBaseInL3V2
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 IdNotValidAttribute = _libsbml.IdNotValidAttribute
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 InconsistentArgUnits = _libsbml.InconsistentArgUnits
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 InconsistentArgUnitsWarnings = _libsbml.InconsistentArgUnitsWarnings
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 InconsistentExponUnitsWarnings = _libsbml.InconsistentExponUnitsWarnings
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 InconsistentKineticLawUnitsL3 = _libsbml.InconsistentKineticLawUnitsL3
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 InconsistentPowerUnitsWarnings = _libsbml.InconsistentPowerUnitsWarnings
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 IncorrectCompartmentSpatialDimensions = _libsbml.IncorrectCompartmentSpatialDimensions
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 IncorrectOrderInConstraint = _libsbml.IncorrectOrderInConstraint
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 IncorrectOrderInEvent = _libsbml.IncorrectOrderInEvent
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 IncorrectOrderInKineticLaw = _libsbml.IncorrectOrderInKineticLaw
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 IncorrectOrderInModel = _libsbml.IncorrectOrderInModel
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 IncorrectOrderInReaction = _libsbml.IncorrectOrderInReaction
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 INFIX_SYNTAX_CURLY_BRACES = _libsbml.INFIX_SYNTAX_CURLY_BRACES
 
 INFIX_SYNTAX_CURLY_BRACES_SEMICOLON = _libsbml.INFIX_SYNTAX_CURLY_BRACES_SEMICOLON
 
 INFIX_SYNTAX_NAMED_SQUARE_BRACKETS = _libsbml.INFIX_SYNTAX_NAMED_SQUARE_BRACKETS
 
 InitAssignCompartmenMismatch = _libsbml.InitAssignCompartmenMismatch
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 InitAssignmentAndRuleForSameId = _libsbml.InitAssignmentAndRuleForSameId
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 InitAssignmentCannotRef0DComp = _libsbml.InitAssignmentCannotRef0DComp
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 InitAssignParameterMismatch = _libsbml.InitAssignParameterMismatch
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 InitAssignSpeciesMismatch = _libsbml.InitAssignSpeciesMismatch
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 InitAssignStoichiometryMismatch = _libsbml.InitAssignStoichiometryMismatch
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 InitialAssignNotValidComponent = _libsbml.InitialAssignNotValidComponent
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 InitialValueFalseEventNotSupported = _libsbml.InitialValueFalseEventNotSupported
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 InitialValueNotBoolean = _libsbml.InitialValueNotBoolean
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 INPUT_SIGN_DUAL = _libsbml.INPUT_SIGN_DUAL
 qual One of the possible Input "sign" attribute values. More...
 
 INPUT_SIGN_NEGATIVE = _libsbml.INPUT_SIGN_NEGATIVE
 qual One of the possible Input "sign" attribute values. More...
 
 INPUT_SIGN_POSITIVE = _libsbml.INPUT_SIGN_POSITIVE
 long More...
 
 INPUT_SIGN_UNKNOWN = _libsbml.INPUT_SIGN_UNKNOWN
 qual One of the possible Input "sign" attribute values. More...
 
 INPUT_SIGN_VALUE_NOTSET = _libsbml.INPUT_SIGN_VALUE_NOTSET
 qual One of the possible Input "sign" attribute values. More...
 
 INPUT_TRANSITION_EFFECT_CONSUMPTION = _libsbml.INPUT_TRANSITION_EFFECT_CONSUMPTION
 qual One of the possible Input transition effects. More...
 
 INPUT_TRANSITION_EFFECT_NONE = _libsbml.INPUT_TRANSITION_EFFECT_NONE
 long More...
 
 INPUT_TRANSITION_EFFECT_UNKNOWN = _libsbml.INPUT_TRANSITION_EFFECT_UNKNOWN
 qual One of the possible Input transition effects. More...
 
 IntegerSpatialDimensions = _libsbml.IntegerSpatialDimensions
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 InternalXMLParserError = _libsbml.InternalXMLParserError
 A value in the enumeration of all the error and warning codes returned by the XML layer in libSBML. More...
 
 Invalid1DCompartmentUnits = _libsbml.Invalid1DCompartmentUnits
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 Invalid2DCompartmentUnits = _libsbml.Invalid2DCompartmentUnits
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 Invalid3DCompartmentUnits = _libsbml.Invalid3DCompartmentUnits
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 InvalidAfterXMLContent = _libsbml.InvalidAfterXMLContent
 A value in the enumeration of all the error and warning codes returned by the XML layer in libSBML. More...
 
 InvalidApplyCiInLambda = _libsbml.InvalidApplyCiInLambda
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 InvalidAreaRedefinition = _libsbml.InvalidAreaRedefinition
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 InvalidAssignRuleVariable = _libsbml.InvalidAssignRuleVariable
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 InvalidCharInXML = _libsbml.InvalidCharInXML
 A value in the enumeration of all the error and warning codes returned by the XML layer in libSBML. More...
 
 InvalidCiInLambda = _libsbml.InvalidCiInLambda
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 InvalidCompartmentSBOTerm = _libsbml.InvalidCompartmentSBOTerm
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 InvalidCompartmentTypeRef = _libsbml.InvalidCompartmentTypeRef
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 InvalidCompartmentTypeSBOTerm = _libsbml.InvalidCompartmentTypeSBOTerm
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 InvalidConstraintContent = _libsbml.InvalidConstraintContent
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 InvalidConstraintSBOTerm = _libsbml.InvalidConstraintSBOTerm
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 InvalidDelaySBOTerm = _libsbml.InvalidDelaySBOTerm
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 InvalidEventAssignmentSBOTerm = _libsbml.InvalidEventAssignmentSBOTerm
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 InvalidEventAssignmentVariable = _libsbml.InvalidEventAssignmentVariable
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 InvalidEventSBOTerm = _libsbml.InvalidEventSBOTerm
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 InvalidFunctionDefReturnType = _libsbml.InvalidFunctionDefReturnType
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 InvalidFunctionDefSBOTerm = _libsbml.InvalidFunctionDefSBOTerm
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 InvalidIdSyntax = _libsbml.InvalidIdSyntax
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 InvalidInitAssignSBOTerm = _libsbml.InvalidInitAssignSBOTerm
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 InvalidInitAssignSymbol = _libsbml.InvalidInitAssignSymbol
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 InvalidKineticLawSBOTerm = _libsbml.InvalidKineticLawSBOTerm
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 InvalidL1CompartmentUnits = _libsbml.InvalidL1CompartmentUnits
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 InvalidLengthRedefinition = _libsbml.InvalidLengthRedefinition
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 InvalidLocalParameterSBOTerm = _libsbml.InvalidLocalParameterSBOTerm
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 InvalidMathElement = _libsbml.InvalidMathElement
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 InvalidMathMLAttribute = _libsbml.InvalidMathMLAttribute
 Attribute not allowed on this element. More...
 
 InvalidMetaidSyntax = _libsbml.InvalidMetaidSyntax
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 InvalidModelSBOTerm = _libsbml.InvalidModelSBOTerm
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 InvalidModifiersList = _libsbml.InvalidModifiersList
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 InvalidNamespaceOnSBML = _libsbml.InvalidNamespaceOnSBML
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 InvalidNameSyntax = _libsbml.InvalidNameSyntax
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 InvalidNoArgsPassedToFunctionDef = _libsbml.InvalidNoArgsPassedToFunctionDef
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 InvalidNotesContent = _libsbml.InvalidNotesContent
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 InvalidPackageLevelVersion = _libsbml.InvalidPackageLevelVersion
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 InvalidParameterSBOTerm = _libsbml.InvalidParameterSBOTerm
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 InvalidParameterUnits = _libsbml.InvalidParameterUnits
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 InvalidRateRuleVariable = _libsbml.InvalidRateRuleVariable
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 InvalidReactantsProductsList = _libsbml.InvalidReactantsProductsList
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 InvalidReactionSBOTerm = _libsbml.InvalidReactionSBOTerm
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 InvalidRuleOrdering = _libsbml.InvalidRuleOrdering
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 InvalidRuleSBOTerm = _libsbml.InvalidRuleSBOTerm
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 InvalidSBMLElementSBOTerm = _libsbml.InvalidSBMLElementSBOTerm
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 InvalidSBMLLevelVersion = _libsbml.InvalidSBMLLevelVersion
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 InvalidSBOTermSyntax = _libsbml.InvalidSBOTermSyntax
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 InvalidSpeciesCompartmentRef = _libsbml.InvalidSpeciesCompartmentRef
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 InvalidSpeciesReference = _libsbml.InvalidSpeciesReference
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 InvalidSpeciesReferenceSBOTerm = _libsbml.InvalidSpeciesReferenceSBOTerm
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 InvalidSpeciesSBOTerm = _libsbml.InvalidSpeciesSBOTerm
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 InvalidSpeciesSusbstanceUnits = _libsbml.InvalidSpeciesSusbstanceUnits
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 InvalidSpeciesTypeRef = _libsbml.InvalidSpeciesTypeRef
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 InvalidSpeciesTypeSBOTerm = _libsbml.InvalidSpeciesTypeSBOTerm
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 InvalidSubstanceRedefinition = _libsbml.InvalidSubstanceRedefinition
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 InvalidTargetLevelVersion = _libsbml.InvalidTargetLevelVersion
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 InvalidTimeRedefinition = _libsbml.InvalidTimeRedefinition
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 InvalidTriggerSBOTerm = _libsbml.InvalidTriggerSBOTerm
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 InvalidUnitDefId = _libsbml.InvalidUnitDefId
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 InvalidUnitIdSyntax = _libsbml.InvalidUnitIdSyntax
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 InvalidUnitKind = _libsbml.InvalidUnitKind
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 InvalidUnitsValue = _libsbml.InvalidUnitsValue
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 InvalidVolumeRedefinition = _libsbml.InvalidVolumeRedefinition
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 InvalidXMLConstruct = _libsbml.InvalidXMLConstruct
 A value in the enumeration of all the error and warning codes returned by the XML layer in libSBML. More...
 
 KineticLawNotSubstancePerTime = _libsbml.KineticLawNotSubstancePerTime
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 KineticLawParametersAreLocalOnly = _libsbml.KineticLawParametersAreLocalOnly
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 L1V1CompartmentVolumeReqd = _libsbml.L1V1CompartmentVolumeReqd
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 L3AreaUnitsOnModel = _libsbml.L3AreaUnitsOnModel
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 L3ConversionFactorOnModel = _libsbml.L3ConversionFactorOnModel
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 L3ExtentUnitsOnModel = _libsbml.L3ExtentUnitsOnModel
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 L3LengthUnitsOnModel = _libsbml.L3LengthUnitsOnModel
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 L3NotSchemaConformant = _libsbml.L3NotSchemaConformant
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 L3NotSupported = _libsbml.L3NotSupported
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 L3P_AVOGADRO_IS_CSYMBOL = _libsbml.L3P_AVOGADRO_IS_CSYMBOL
 Do not treat 'avogadro' specially—consider it a plain symbol name when parsing text-string formulas. More...
 
 L3P_AVOGADRO_IS_NAME = _libsbml.L3P_AVOGADRO_IS_NAME
 Collapse unary minuses where possible. More...
 
 L3P_COLLAPSE_UNARY_MINUS = _libsbml.L3P_COLLAPSE_UNARY_MINUS
 Retain unary minuses in the AST representation when parsing text-string formulas. More...
 
 L3P_COMPARE_BUILTINS_CASE_INSENSITIVE = _libsbml.L3P_COMPARE_BUILTINS_CASE_INSENSITIVE
 Treat all forms of built-in functions as referencing that function, regardless of the capitalization of that string. More...
 
 L3P_COMPARE_BUILTINS_CASE_SENSITIVE = _libsbml.L3P_COMPARE_BUILTINS_CASE_SENSITIVE
 Treat only the all-lower-case form of built-in functions as referencing that function, and all other forms of capitalization of that string as referencing user-defined functions or values. More...
 
 L3P_EXPAND_UNARY_MINUS = _libsbml.L3P_EXPAND_UNARY_MINUS
 Parse units in text-string formulas when parsing text-string formulas. More...
 
 L3P_MODULO_IS_PIECEWISE = _libsbml.L3P_MODULO_IS_PIECEWISE
 
 L3P_MODULO_IS_REM = _libsbml.L3P_MODULO_IS_REM
 
 L3P_NO_UNITS = _libsbml.L3P_NO_UNITS
 Recognize 'avogadro' as an SBML Level 3 symbol when parsing text-string formulas. More...
 
 L3P_PARSE_L3V2_FUNCTIONS_AS_GENERIC = _libsbml.L3P_PARSE_L3V2_FUNCTIONS_AS_GENERIC
 
 L3P_PARSE_L3V2_FUNCTIONS_DIRECTLY = _libsbml.L3P_PARSE_L3V2_FUNCTIONS_DIRECTLY
 
 L3P_PARSE_LOG_AS_ERROR = _libsbml.L3P_PARSE_LOG_AS_ERROR
 Collapse unary minuses where possible when parsing text-string formulas. More...
 
 L3P_PARSE_LOG_AS_LN = _libsbml.L3P_PARSE_LOG_AS_LN
 Refuse to parse log(x) at all, and set an error message telling the user to use log10(x), ln(x), or log(base, x) instead. More...
 
 L3P_PARSE_LOG_AS_LOG10 = _libsbml.L3P_PARSE_LOG_AS_LOG10
 Parse log(x) as the natural logarithm of x. More...
 
 L3P_PARSE_PACKAGE_MATH_AS_GENERIC = _libsbml.L3P_PARSE_PACKAGE_MATH_AS_GENERIC
 
 L3P_PARSE_PACKAGE_MATH_DIRECTLY = _libsbml.L3P_PARSE_PACKAGE_MATH_DIRECTLY
 
 L3P_PARSE_UNITS = _libsbml.L3P_PARSE_UNITS
 Do not recognize units in text-string formulas—treat them as errors. More...
 
 L3PackageOnLowerSBML = _libsbml.L3PackageOnLowerSBML
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 L3SpatialDimensionsUnset = _libsbml.L3SpatialDimensionsUnset
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 L3SubstanceUnitsOnModel = _libsbml.L3SubstanceUnitsOnModel
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 L3TimeUnitsOnModel = _libsbml.L3TimeUnitsOnModel
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 L3V2FastDeprecated = _libsbml.L3V2FastDeprecated
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 L3V2SubstanceUnitsOnModel = _libsbml.L3V2SubstanceUnitsOnModel
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 L3VolumeUnitsOnModel = _libsbml.L3VolumeUnitsOnModel
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 LambdaOnlyAllowedInFunctionDef = _libsbml.LambdaOnlyAllowedInFunctionDef
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 LayoutAttributeRequiredMissing = _libsbml.LayoutAttributeRequiredMissing
 layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError. More...
 
 LayoutAttributeRequiredMustBeBoolean = _libsbml.LayoutAttributeRequiredMustBeBoolean
 layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError. More...
 
 LayoutBBoxAllowedAttributes = _libsbml.LayoutBBoxAllowedAttributes
 layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError. More...
 
 LayoutBBoxAllowedCoreAttributes = _libsbml.LayoutBBoxAllowedCoreAttributes
 layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError. More...
 
 LayoutBBoxAllowedCoreElements = _libsbml.LayoutBBoxAllowedCoreElements
 layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError. More...
 
 LayoutBBoxAllowedElements = _libsbml.LayoutBBoxAllowedElements
 layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError. More...
 
 LayoutBBoxConsistent3DDefinition = _libsbml.LayoutBBoxConsistent3DDefinition
 layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError. More...
 
 LayoutCBezAllowedAttributes = _libsbml.LayoutCBezAllowedAttributes
 layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError. More...
 
 LayoutCBezAllowedCoreAttributes = _libsbml.LayoutCBezAllowedCoreAttributes
 layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError. More...
 
 LayoutCBezAllowedCoreElements = _libsbml.LayoutCBezAllowedCoreElements
 layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError. More...
 
 LayoutCBezAllowedElements = _libsbml.LayoutCBezAllowedElements
 layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError. More...
 
 LayoutCGAllowedAttributes = _libsbml.LayoutCGAllowedAttributes
 layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError. More...
 
 LayoutCGAllowedCoreAttributes = _libsbml.LayoutCGAllowedCoreAttributes
 layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError. More...
 
 LayoutCGAllowedCoreElements = _libsbml.LayoutCGAllowedCoreElements
 layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError. More...
 
 LayoutCGAllowedElements = _libsbml.LayoutCGAllowedElements
 layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError. More...
 
 LayoutCGCompartmentMustRefComp = _libsbml.LayoutCGCompartmentMustRefComp
 layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError. More...
 
 LayoutCGCompartmentSyntax = _libsbml.LayoutCGCompartmentSyntax
 layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError. More...
 
 LayoutCGMetaIdRefMustBeIDREF = _libsbml.LayoutCGMetaIdRefMustBeIDREF
 layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError. More...
 
 LayoutCGMetaIdRefMustReferenceObject = _libsbml.LayoutCGMetaIdRefMustReferenceObject
 layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError. More...
 
 LayoutCGNoDuplicateReferences = _libsbml.LayoutCGNoDuplicateReferences
 layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError. More...
 
 LayoutCGOrderMustBeDouble = _libsbml.LayoutCGOrderMustBeDouble
 layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError. More...
 
 LayoutCurveAllowedAttributes = _libsbml.LayoutCurveAllowedAttributes
 layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError. More...
 
 LayoutCurveAllowedCoreAttributes = _libsbml.LayoutCurveAllowedCoreAttributes
 layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError. More...
 
 LayoutCurveAllowedCoreElements = _libsbml.LayoutCurveAllowedCoreElements
 layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError. More...
 
 LayoutCurveAllowedElements = _libsbml.LayoutCurveAllowedElements
 layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError. More...
 
 LayoutDimsAllowedAttributes = _libsbml.LayoutDimsAllowedAttributes
 layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError. More...
 
 LayoutDimsAllowedCoreAttributes = _libsbml.LayoutDimsAllowedCoreAttributes
 layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError. More...
 
 LayoutDimsAllowedCoreElements = _libsbml.LayoutDimsAllowedCoreElements
 layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError. More...
 
 LayoutDimsAttributesMustBeDouble = _libsbml.LayoutDimsAttributesMustBeDouble
 layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError. More...
 
 LayoutDuplicateComponentId = _libsbml.LayoutDuplicateComponentId
 layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError. More...
 
 LayoutElementNotInNs = _libsbml.LayoutElementNotInNs
 layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError. More...
 
 LayoutGGAllowedAttributes = _libsbml.LayoutGGAllowedAttributes
 layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError. More...
 
 LayoutGGAllowedCoreAttributes = _libsbml.LayoutGGAllowedCoreAttributes
 layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError. More...
 
 LayoutGGAllowedCoreElements = _libsbml.LayoutGGAllowedCoreElements
 layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError. More...
 
 LayoutGGAllowedElements = _libsbml.LayoutGGAllowedElements
 layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError. More...
 
 LayoutGGMetaIdRefMustBeIDREF = _libsbml.LayoutGGMetaIdRefMustBeIDREF
 layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError. More...
 
 LayoutGGMetaIdRefMustReferenceObject = _libsbml.LayoutGGMetaIdRefMustReferenceObject
 layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError. More...
 
 LayoutGGNoDuplicateReferences = _libsbml.LayoutGGNoDuplicateReferences
 layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError. More...
 
 LayoutGGReferenceMustRefObject = _libsbml.LayoutGGReferenceMustRefObject
 layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError. More...
 
 LayoutGGReferenceSyntax = _libsbml.LayoutGGReferenceSyntax
 layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError. More...
 
 LayoutGOAllowedAttributes = _libsbml.LayoutGOAllowedAttributes
 layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError. More...
 
 LayoutGOAllowedCoreAttributes = _libsbml.LayoutGOAllowedCoreAttributes
 layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError. More...
 
 LayoutGOAllowedCoreElements = _libsbml.LayoutGOAllowedCoreElements
 layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError. More...
 
 LayoutGOAllowedElements = _libsbml.LayoutGOAllowedElements
 layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError. More...
 
 LayoutGOMetaIdRefMustBeIDREF = _libsbml.LayoutGOMetaIdRefMustBeIDREF
 layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError. More...
 
 LayoutGOMetaIdRefMustReferenceObject = _libsbml.LayoutGOMetaIdRefMustReferenceObject
 layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError. More...
 
 LayoutGOMustContainBoundingBox = _libsbml.LayoutGOMustContainBoundingBox
 layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError. More...
 
 LayoutLayoutAllowedAttributes = _libsbml.LayoutLayoutAllowedAttributes
 layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError. More...
 
 LayoutLayoutAllowedCoreAttributes = _libsbml.LayoutLayoutAllowedCoreAttributes
 layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError. More...
 
 LayoutLayoutAllowedElements = _libsbml.LayoutLayoutAllowedElements
 layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError. More...
 
 LayoutLayoutMustHaveDimensions = _libsbml.LayoutLayoutMustHaveDimensions
 layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError. More...
 
 LayoutLayoutNameMustBeString = _libsbml.LayoutLayoutNameMustBeString
 layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError. More...
 
 LayoutLOAddGOAllowedAttribut = _libsbml.LayoutLOAddGOAllowedAttribut
 layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError. More...
 
 LayoutLOAddGOAllowedElements = _libsbml.LayoutLOAddGOAllowedElements
 layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError. More...
 
 LayoutLOCompGlyphAllowedAttributes = _libsbml.LayoutLOCompGlyphAllowedAttributes
 layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError. More...
 
 LayoutLOCompGlyphAllowedElements = _libsbml.LayoutLOCompGlyphAllowedElements
 layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError. More...
 
 LayoutLOCurveSegsAllowedAttributes = _libsbml.LayoutLOCurveSegsAllowedAttributes
 layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError. More...
 
 LayoutLOCurveSegsAllowedElements = _libsbml.LayoutLOCurveSegsAllowedElements
 layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError. More...
 
 LayoutLOCurveSegsNotEmpty = _libsbml.LayoutLOCurveSegsNotEmpty
 layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError. More...
 
 LayoutLOLayoutsAllowedAttributes = _libsbml.LayoutLOLayoutsAllowedAttributes
 layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError. More...
 
 LayoutLOLayoutsAllowedElements = _libsbml.LayoutLOLayoutsAllowedElements
 layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError. More...
 
 LayoutLOLayoutsNotEmpty = _libsbml.LayoutLOLayoutsNotEmpty
 layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError. More...
 
 LayoutLOReferenceGlyphAllowedAttribs = _libsbml.LayoutLOReferenceGlyphAllowedAttribs
 layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError. More...
 
 LayoutLOReferenceGlyphAllowedElements = _libsbml.LayoutLOReferenceGlyphAllowedElements
 layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError. More...
 
 LayoutLORnGlyphAllowedAttributes = _libsbml.LayoutLORnGlyphAllowedAttributes
 layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError. More...
 
 LayoutLORnGlyphAllowedElements = _libsbml.LayoutLORnGlyphAllowedElements
 layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError. More...
 
 LayoutLOSpeciesGlyphAllowedAttributes = _libsbml.LayoutLOSpeciesGlyphAllowedAttributes
 layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError. More...
 
 LayoutLOSpeciesGlyphAllowedElements = _libsbml.LayoutLOSpeciesGlyphAllowedElements
 layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError. More...
 
 LayoutLOSpeciesRefGlyphAllowedAttribs = _libsbml.LayoutLOSpeciesRefGlyphAllowedAttribs
 layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError. More...
 
 LayoutLOSpeciesRefGlyphAllowedElements = _libsbml.LayoutLOSpeciesRefGlyphAllowedElements
 layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError. More...
 
 LayoutLOSpeciesRefGlyphNotEmpty = _libsbml.LayoutLOSpeciesRefGlyphNotEmpty
 layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError. More...
 
 LayoutLOSubGlyphAllowedAttribs = _libsbml.LayoutLOSubGlyphAllowedAttribs
 layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError. More...
 
 LayoutLOSubGlyphAllowedElements = _libsbml.LayoutLOSubGlyphAllowedElements
 layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError. More...
 
 LayoutLOTextGlyphAllowedAttributes = _libsbml.LayoutLOTextGlyphAllowedAttributes
 layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError. More...
 
 LayoutLOTextGlyphAllowedElements = _libsbml.LayoutLOTextGlyphAllowedElements
 layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError. More...
 
 LayoutLSegAllowedAttributes = _libsbml.LayoutLSegAllowedAttributes
 layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError. More...
 
 LayoutLSegAllowedCoreAttributes = _libsbml.LayoutLSegAllowedCoreAttributes
 layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError. More...
 
 LayoutLSegAllowedCoreElements = _libsbml.LayoutLSegAllowedCoreElements
 layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError. More...
 
 LayoutLSegAllowedElements = _libsbml.LayoutLSegAllowedElements
 layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError. More...
 
 LayoutNoEmptyListOfs = _libsbml.LayoutNoEmptyListOfs
 layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError. More...
 
 LayoutNSUndeclared = _libsbml.LayoutNSUndeclared
 layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError. More...
 
 LayoutOnlyOneEachListOf = _libsbml.LayoutOnlyOneEachListOf
 layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError. More...
 
 LayoutOnlyOneLOLayouts = _libsbml.LayoutOnlyOneLOLayouts
 layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError. More...
 
 LayoutPointAllowedAttributes = _libsbml.LayoutPointAllowedAttributes
 layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError. More...
 
 LayoutPointAllowedCoreAttributes = _libsbml.LayoutPointAllowedCoreAttributes
 layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError. More...
 
 LayoutPointAllowedCoreElements = _libsbml.LayoutPointAllowedCoreElements
 layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError. More...
 
 LayoutPointAttributesMustBeDouble = _libsbml.LayoutPointAttributesMustBeDouble
 layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError. More...
 
 LayoutREFGAllowedAttributes = _libsbml.LayoutREFGAllowedAttributes
 layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError. More...
 
 LayoutREFGAllowedCoreAttributes = _libsbml.LayoutREFGAllowedCoreAttributes
 layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError. More...
 
 LayoutREFGAllowedCoreElements = _libsbml.LayoutREFGAllowedCoreElements
 layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError. More...
 
 LayoutREFGAllowedElements = _libsbml.LayoutREFGAllowedElements
 layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError. More...
 
 LayoutREFGGlyphMustRefObject = _libsbml.LayoutREFGGlyphMustRefObject
 layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError. More...
 
 LayoutREFGGlyphSyntax = _libsbml.LayoutREFGGlyphSyntax
 layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError. More...
 
 LayoutREFGMetaIdRefMustBeIDREF = _libsbml.LayoutREFGMetaIdRefMustBeIDREF
 layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError. More...
 
 LayoutREFGMetaIdRefMustReferenceObject = _libsbml.LayoutREFGMetaIdRefMustReferenceObject
 layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError. More...
 
 LayoutREFGNoDuplicateReferences = _libsbml.LayoutREFGNoDuplicateReferences
 layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError. More...
 
 LayoutREFGReferenceMustRefObject = _libsbml.LayoutREFGReferenceMustRefObject
 layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError. More...
 
 LayoutREFGReferenceSyntax = _libsbml.LayoutREFGReferenceSyntax
 layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError. More...
 
 LayoutREFGRoleSyntax = _libsbml.LayoutREFGRoleSyntax
 layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError. More...
 
 LayoutRequiredFalse = _libsbml.LayoutRequiredFalse
 layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError. More...
 
 LayoutRGAllowedAttributes = _libsbml.LayoutRGAllowedAttributes
 layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError. More...
 
 LayoutRGAllowedCoreAttributes = _libsbml.LayoutRGAllowedCoreAttributes
 layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError. More...
 
 LayoutRGAllowedCoreElements = _libsbml.LayoutRGAllowedCoreElements
 layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError. More...
 
 LayoutRGAllowedElements = _libsbml.LayoutRGAllowedElements
 layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError. More...
 
 LayoutRGMetaIdRefMustBeIDREF = _libsbml.LayoutRGMetaIdRefMustBeIDREF
 layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError. More...
 
 LayoutRGMetaIdRefMustReferenceObject = _libsbml.LayoutRGMetaIdRefMustReferenceObject
 layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError. More...
 
 LayoutRGNoDuplicateReferences = _libsbml.LayoutRGNoDuplicateReferences
 layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError. More...
 
 LayoutRGReactionMustRefReaction = _libsbml.LayoutRGReactionMustRefReaction
 layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError. More...
 
 LayoutRGReactionSyntax = _libsbml.LayoutRGReactionSyntax
 layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError. More...
 
 LayoutSGAllowedAttributes = _libsbml.LayoutSGAllowedAttributes
 layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError. More...
 
 LayoutSGAllowedCoreAttributes = _libsbml.LayoutSGAllowedCoreAttributes
 layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError. More...
 
 LayoutSGAllowedCoreElements = _libsbml.LayoutSGAllowedCoreElements
 layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError. More...
 
 LayoutSGAllowedElements = _libsbml.LayoutSGAllowedElements
 layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError. More...
 
 LayoutSGMetaIdRefMustBeIDREF = _libsbml.LayoutSGMetaIdRefMustBeIDREF
 layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError. More...
 
 LayoutSGMetaIdRefMustReferenceObject = _libsbml.LayoutSGMetaIdRefMustReferenceObject
 layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError. More...
 
 LayoutSGNoDuplicateReferences = _libsbml.LayoutSGNoDuplicateReferences
 layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError. More...
 
 LayoutSGSpeciesMustRefSpecies = _libsbml.LayoutSGSpeciesMustRefSpecies
 layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError. More...
 
 LayoutSGSpeciesSyntax = _libsbml.LayoutSGSpeciesSyntax
 layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError. More...
 
 LayoutSIdSyntax = _libsbml.LayoutSIdSyntax
 layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError. More...
 
 LayoutSRGAllowedAttributes = _libsbml.LayoutSRGAllowedAttributes
 layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError. More...
 
 LayoutSRGAllowedCoreAttributes = _libsbml.LayoutSRGAllowedCoreAttributes
 layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError. More...
 
 LayoutSRGAllowedCoreElements = _libsbml.LayoutSRGAllowedCoreElements
 layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError. More...
 
 LayoutSRGAllowedElements = _libsbml.LayoutSRGAllowedElements
 layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError. More...
 
 LayoutSRGMetaIdRefMustBeIDREF = _libsbml.LayoutSRGMetaIdRefMustBeIDREF
 layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError. More...
 
 LayoutSRGMetaIdRefMustReferenceObject = _libsbml.LayoutSRGMetaIdRefMustReferenceObject
 layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError. More...
 
 LayoutSRGNoDuplicateReferences = _libsbml.LayoutSRGNoDuplicateReferences
 layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError. More...
 
 LayoutSRGRoleSyntax = _libsbml.LayoutSRGRoleSyntax
 layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError. More...
 
 LayoutSRGSpeciesGlyphMustRefObject = _libsbml.LayoutSRGSpeciesGlyphMustRefObject
 layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError. More...
 
 LayoutSRGSpeciesGlyphSyntax = _libsbml.LayoutSRGSpeciesGlyphSyntax
 layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError. More...
 
 LayoutSRGSpeciesReferenceSyntax = _libsbml.LayoutSRGSpeciesReferenceSyntax
 layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError. More...
 
 LayoutSRGSpeciesRefMustRefObject = _libsbml.LayoutSRGSpeciesRefMustRefObject
 layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError. More...
 
 LayoutTGAllowedAttributes = _libsbml.LayoutTGAllowedAttributes
 layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError. More...
 
 LayoutTGAllowedCoreAttributes = _libsbml.LayoutTGAllowedCoreAttributes
 layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError. More...
 
 LayoutTGAllowedCoreElements = _libsbml.LayoutTGAllowedCoreElements
 layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError. More...
 
 LayoutTGAllowedElements = _libsbml.LayoutTGAllowedElements
 layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError. More...
 
 LayoutTGGraphicalObjectMustRefObject = _libsbml.LayoutTGGraphicalObjectMustRefObject
 layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError. More...
 
 LayoutTGGraphicalObjectSyntax = _libsbml.LayoutTGGraphicalObjectSyntax
 layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError. More...
 
 LayoutTGMetaIdRefMustBeIDREF = _libsbml.LayoutTGMetaIdRefMustBeIDREF
 layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError. More...
 
 LayoutTGMetaIdRefMustReferenceObject = _libsbml.LayoutTGMetaIdRefMustReferenceObject
 layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError. More...
 
 LayoutTGNoDuplicateReferences = _libsbml.LayoutTGNoDuplicateReferences
 layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError. More...
 
 LayoutTGOriginOfTextMustRefObject = _libsbml.LayoutTGOriginOfTextMustRefObject
 layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError. More...
 
 LayoutTGOriginOfTextSyntax = _libsbml.LayoutTGOriginOfTextSyntax
 layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError. More...
 
 LayoutTGTextMustBeString = _libsbml.LayoutTGTextMustBeString
 layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError. More...
 
 LayoutUnknownError = _libsbml.LayoutUnknownError
 long More...
 
 LayoutXsiTypeAllowedLocations = _libsbml.LayoutXsiTypeAllowedLocations
 layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError. More...
 
 LayoutXsiTypeSyntax = _libsbml.LayoutXsiTypeSyntax
 layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError. More...
 
 LevelPositiveInteger = _libsbml.LevelPositiveInteger
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 LIBSBML_ANNOTATION_NAME_NOT_FOUND = _libsbml.LIBSBML_ANNOTATION_NAME_NOT_FOUND
 The existing annotation does not have a top-level element with the given name. More...
 
 LIBSBML_ANNOTATION_NS_NOT_FOUND = _libsbml.LIBSBML_ANNOTATION_NS_NOT_FOUND
 The existing annotation does not have a top-level element with the given namespace. More...
 
 LIBSBML_CAT_GENERAL_CONSISTENCY = _libsbml.LIBSBML_CAT_GENERAL_CONSISTENCY
 Category code for SBMLError diagnostics. More...
 
 LIBSBML_CAT_IDENTIFIER_CONSISTENCY = _libsbml.LIBSBML_CAT_IDENTIFIER_CONSISTENCY
 Category code for SBMLError diagnostics. More...
 
 LIBSBML_CAT_INTERNAL = _libsbml.LIBSBML_CAT_INTERNAL
 Category code for errors in the XML layer. More...
 
 LIBSBML_CAT_INTERNAL_CONSISTENCY = _libsbml.LIBSBML_CAT_INTERNAL_CONSISTENCY
 Category code for SBMLError diagnostics. More...
 
 LIBSBML_CAT_MATHML_CONSISTENCY = _libsbml.LIBSBML_CAT_MATHML_CONSISTENCY
 Category code for SBMLError diagnostics. More...
 
 LIBSBML_CAT_MODELING_PRACTICE = _libsbml.LIBSBML_CAT_MODELING_PRACTICE
 Category code for SBMLError diagnostics. More...
 
 LIBSBML_CAT_OVERDETERMINED_MODEL = _libsbml.LIBSBML_CAT_OVERDETERMINED_MODEL
 Category code for SBMLError diagnostics. More...
 
 LIBSBML_CAT_SBML = _libsbml.LIBSBML_CAT_SBML
 Category code for errors in the XML layer. More...
 
 LIBSBML_CAT_SBML_COMPATIBILITY = _libsbml.LIBSBML_CAT_SBML_COMPATIBILITY
 Category code for SBMLError diagnostics. More...
 
 LIBSBML_CAT_SBML_L1_COMPAT = _libsbml.LIBSBML_CAT_SBML_L1_COMPAT
 Category code for SBMLError diagnostics. More...
 
 LIBSBML_CAT_SBML_L2V1_COMPAT = _libsbml.LIBSBML_CAT_SBML_L2V1_COMPAT
 Category code for SBMLError diagnostics. More...
 
 LIBSBML_CAT_SBML_L2V2_COMPAT = _libsbml.LIBSBML_CAT_SBML_L2V2_COMPAT
 Category code for SBMLError diagnostics. More...
 
 LIBSBML_CAT_SBML_L2V3_COMPAT = _libsbml.LIBSBML_CAT_SBML_L2V3_COMPAT
 Category code for SBMLError diagnostics. More...
 
 LIBSBML_CAT_SBML_L2V4_COMPAT = _libsbml.LIBSBML_CAT_SBML_L2V4_COMPAT
 Category code for SBMLError diagnostics. More...
 
 LIBSBML_CAT_SBML_L3V1_COMPAT = _libsbml.LIBSBML_CAT_SBML_L3V1_COMPAT
 Category code for SBMLError diagnostics. More...
 
 LIBSBML_CAT_SBML_L3V2_COMPAT = _libsbml.LIBSBML_CAT_SBML_L3V2_COMPAT
 Category code for SBMLError diagnostics. More...
 
 LIBSBML_CAT_SBO_CONSISTENCY = _libsbml.LIBSBML_CAT_SBO_CONSISTENCY
 Category code for SBMLError diagnostics. More...
 
 LIBSBML_CAT_SYSTEM = _libsbml.LIBSBML_CAT_SYSTEM
 Category code for errors in the XML layer. More...
 
 LIBSBML_CAT_UNITS_CONSISTENCY = _libsbml.LIBSBML_CAT_UNITS_CONSISTENCY
 Category code for SBMLError diagnostics. More...
 
 LIBSBML_CAT_XML = _libsbml.LIBSBML_CAT_XML
 Category code for errors in the XML layer. More...
 
 LIBSBML_CONV_CONVERSION_NOT_AVAILABLE = _libsbml.LIBSBML_CONV_CONVERSION_NOT_AVAILABLE
 One of the possible libSBML package operation return codes. More...
 
 LIBSBML_CONV_INVALID_SRC_DOCUMENT = _libsbml.LIBSBML_CONV_INVALID_SRC_DOCUMENT
 One of the possible libSBML package operation return codes. More...
 
 LIBSBML_CONV_INVALID_TARGET_NAMESPACE = _libsbml.LIBSBML_CONV_INVALID_TARGET_NAMESPACE
 One of the possible libSBML package operation return codes. More...
 
 LIBSBML_CONV_PKG_CONSIDERED_UNKNOWN = _libsbml.LIBSBML_CONV_PKG_CONSIDERED_UNKNOWN
 The package that is being stripped is not an enabled package but considered by libSBML to be an unrecognized package. More...
 
 LIBSBML_CONV_PKG_CONVERSION_NOT_AVAILABLE = _libsbml.LIBSBML_CONV_PKG_CONVERSION_NOT_AVAILABLE
 One of the possible libSBML package operation return codes. More...
 
 LIBSBML_DEPRECATED_ATTRIBUTE = _libsbml.LIBSBML_DEPRECATED_ATTRIBUTE
 The attribute that is the subject of this operation has been deprecated for the combination of SBML Level and Version for the underlying object. More...
 
 LIBSBML_DOTTED_VERSION = _libsbml.LIBSBML_DOTTED_VERSION
 A version string of the form "1.2.3". More...
 
 LIBSBML_DUPLICATE_ANNOTATION_NS = _libsbml.LIBSBML_DUPLICATE_ANNOTATION_NS
 There already exists a top level annotation with the same namespace as annoation being appended. More...
 
 LIBSBML_DUPLICATE_OBJECT_ID = _libsbml.LIBSBML_DUPLICATE_OBJECT_ID
 One of the possible libSBML operation return codes. More...
 
 LIBSBML_INDEX_EXCEEDS_SIZE = _libsbml.LIBSBML_INDEX_EXCEEDS_SIZE
 One of the possible libSBML operation return codes. More...
 
 LIBSBML_INVALID_ATTRIBUTE_VALUE = _libsbml.LIBSBML_INVALID_ATTRIBUTE_VALUE
 One of the possible libSBML operation return codes. More...
 
 LIBSBML_INVALID_OBJECT = _libsbml.LIBSBML_INVALID_OBJECT
 One of the possible libSBML operation return codes. More...
 
 LIBSBML_INVALID_XML_OPERATION = _libsbml.LIBSBML_INVALID_XML_OPERATION
 One of the possible libSBML operation return codes. More...
 
 LIBSBML_LEVEL_MISMATCH = _libsbml.LIBSBML_LEVEL_MISMATCH
 One of the possible libSBML operation return codes. More...
 
 LIBSBML_MISSING_METAID = _libsbml.LIBSBML_MISSING_METAID
 The requested action cannot be performed as the target object does not have the "metaid" attribute set. More...
 
 LIBSBML_NAMESPACES_MISMATCH = _libsbml.LIBSBML_NAMESPACES_MISMATCH
 One of the possible libSBML operation return codes. More...
 
 LIBSBML_OPERATION_FAILED = _libsbml.LIBSBML_OPERATION_FAILED
 One of the possible libSBML operation return codes. More...
 
 LIBSBML_OPERATION_SUCCESS = _libsbml.LIBSBML_OPERATION_SUCCESS
 One of the possible libSBML operation return codes. More...
 
 LIBSBML_OVERRIDE_DISABLED = _libsbml.LIBSBML_OVERRIDE_DISABLED
 Severity override code for errors logged in the XML layer. More...
 
 LIBSBML_OVERRIDE_DONT_LOG = _libsbml.LIBSBML_OVERRIDE_DONT_LOG
 Severity override code for errors logged in the XML layer. More...
 
 LIBSBML_OVERRIDE_ERROR = _libsbml.LIBSBML_OVERRIDE_ERROR
 Severity override code for errors logged in the XML layer. More...
 
 LIBSBML_OVERRIDE_WARNING = _libsbml.LIBSBML_OVERRIDE_WARNING
 Severity override code for errors logged in the XML layer. More...
 
 LIBSBML_PKG_CONFLICT = _libsbml.LIBSBML_PKG_CONFLICT
 One of the possible libSBML package operation return codes. More...
 
 LIBSBML_PKG_CONFLICTED_VERSION = _libsbml.LIBSBML_PKG_CONFLICTED_VERSION
 One of the possible libSBML package operation return codes. More...
 
 LIBSBML_PKG_DISABLED = _libsbml.LIBSBML_PKG_DISABLED
 One of the possible libSBML package operation return codes. More...
 
 LIBSBML_PKG_UNKNOWN = _libsbml.LIBSBML_PKG_UNKNOWN
 One of the possible libSBML package operation return codes. More...
 
 LIBSBML_PKG_UNKNOWN_VERSION = _libsbml.LIBSBML_PKG_UNKNOWN_VERSION
 One of the possible libSBML package operation return codes. More...
 
 LIBSBML_PKG_VERSION_MISMATCH = _libsbml.LIBSBML_PKG_VERSION_MISMATCH
 One of the possible libSBML package operation return codes. More...
 
 LIBSBML_SEV_ERROR = _libsbml.LIBSBML_SEV_ERROR
 Severity code for errors in the XML layer. More...
 
 LIBSBML_SEV_FATAL = _libsbml.LIBSBML_SEV_FATAL
 Severity code for errors in the XML layer. More...
 
 LIBSBML_SEV_INFO = _libsbml.LIBSBML_SEV_INFO
 Severity code for errors in the XML layer. More...
 
 LIBSBML_SEV_WARNING = _libsbml.LIBSBML_SEV_WARNING
 Severity code for errors in the XML layer. More...
 
 LIBSBML_UNEXPECTED_ATTRIBUTE = _libsbml.LIBSBML_UNEXPECTED_ATTRIBUTE
 One of the possible libSBML operation return codes. More...
 
 LIBSBML_USE_ID_ATTRIBUTE_FUNCTION = _libsbml.LIBSBML_USE_ID_ATTRIBUTE_FUNCTION
 For SBML Level 3 Version 2, use the IdAttribute functions. More...
 
 LIBSBML_VERSION = _libsbml.LIBSBML_VERSION
 The version as an integer: version 1.2.3 becomes 10203. More...
 
 LIBSBML_VERSION_MISMATCH = _libsbml.LIBSBML_VERSION_MISMATCH
 One of the possible libSBML operation return codes. More...
 
 LIBSBML_VERSION_STRING = _libsbml.LIBSBML_VERSION_STRING
 
 LibSBMLAdditionalCodesLowerBound = _libsbml.LibSBMLAdditionalCodesLowerBound
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 LocalParameterShadowsId = _libsbml.LocalParameterShadowsId
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 LocalParameterShadowsSpecies = _libsbml.LocalParameterShadowsSpecies
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 MathMLElementNotSupported = _libsbml.MathMLElementNotSupported
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 MathResultMustBeNumeric = _libsbml.MathResultMustBeNumeric
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 MetaIdNotValidAttribute = _libsbml.MetaIdNotValidAttribute
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 MissingAnnotationNamespace = _libsbml.MissingAnnotationNamespace
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 MissingEventAssignment = _libsbml.MissingEventAssignment
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 MissingMathElementNotSupported = _libsbml.MissingMathElementNotSupported
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 MissingModel = _libsbml.MissingModel
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 MissingOrInconsistentLevel = _libsbml.MissingOrInconsistentLevel
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 MissingOrInconsistentVersion = _libsbml.MissingOrInconsistentVersion
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 MissingParticipantsNotSupported = _libsbml.MissingParticipantsNotSupported
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 MissingSpeciesCompartment = _libsbml.MissingSpeciesCompartment
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 MissingTriggerElementNotSupported = _libsbml.MissingTriggerElementNotSupported
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 MissingTriggerInEvent = _libsbml.MissingTriggerInEvent
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 MissingXMLAttributeValue = _libsbml.MissingXMLAttributeValue
 A value in the enumeration of all the error and warning codes returned by the XML layer in libSBML. More...
 
 MissingXMLDecl = _libsbml.MissingXMLDecl
 A value in the enumeration of all the error and warning codes returned by the XML layer in libSBML. More...
 
 MissingXMLElements = _libsbml.MissingXMLElements
 A value in the enumeration of all the error and warning codes returned by the XML layer in libSBML. More...
 
 MissingXMLEncoding = _libsbml.MissingXMLEncoding
 A value in the enumeration of all the error and warning codes returned by the XML layer in libSBML. More...
 
 MissingXMLRequiredAttribute = _libsbml.MissingXMLRequiredAttribute
 A value in the enumeration of all the error and warning codes returned by the XML layer in libSBML. More...
 
 MODEL_QUALIFIER = _libsbml.MODEL_QUALIFIER
 One of the possible MIRIAM annotation types used by CVTerm. More...
 
 ModelSBOBranchChangedBeyondL2v2 = _libsbml.ModelSBOBranchChangedBeyondL2v2
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 ModelSBOBranchChangedBeyondL2v3 = _libsbml.ModelSBOBranchChangedBeyondL2v3
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 ModelSBOBranchChangedInL2v4 = _libsbml.ModelSBOBranchChangedInL2v4
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 ModelSBOBranchChangedInL3v1 = _libsbml.ModelSBOBranchChangedInL3v1
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 MULTI_BINDING_STATUS_BOUND = _libsbml.MULTI_BINDING_STATUS_BOUND
 multi A value in an enumeration defined by the libSBML “multi” extension to implement functionality for the SBML Level 3 Multistate, Multicomponent and Multicompartment Species package. More...
 
 MULTI_BINDING_STATUS_EITHER = _libsbml.MULTI_BINDING_STATUS_EITHER
 multi A value in an enumeration defined by the libSBML “multi” extension to implement functionality for the SBML Level 3 Multistate, Multicomponent and Multicompartment Species package. More...
 
 MULTI_BINDING_STATUS_UNBOUND = _libsbml.MULTI_BINDING_STATUS_UNBOUND
 multi A value in an enumeration defined by the libSBML “multi” extension to implement functionality for the SBML Level 3 Multistate, Multicomponent and Multicompartment Species package. More...
 
 MULTI_BINDING_STATUS_UNKNOWN = _libsbml.MULTI_BINDING_STATUS_UNKNOWN
 multi A value in an enumeration defined by the libSBML “multi” extension to implement functionality for the SBML Level 3 Multistate, Multicomponent and Multicompartment Species package. More...
 
 MULTI_RELATION_AND = _libsbml.MULTI_RELATION_AND
 multi A value in an enumeration defined by the libSBML “multi” extension to implement functionality for the SBML Level 3 Multistate, Multicomponent and Multicompartment Species package. More...
 
 MULTI_RELATION_NOT = _libsbml.MULTI_RELATION_NOT
 multi A value in an enumeration defined by the libSBML “multi” extension to implement functionality for the SBML Level 3 Multistate, Multicomponent and Multicompartment Species package. More...
 
 MULTI_RELATION_OR = _libsbml.MULTI_RELATION_OR
 multi A value in an enumeration defined by the libSBML “multi” extension to implement functionality for the SBML Level 3 Multistate, Multicomponent and Multicompartment Species package. More...
 
 MULTI_RELATION_UNKNOWN = _libsbml.MULTI_RELATION_UNKNOWN
 multi A value in an enumeration defined by the libSBML “multi” extension to implement functionality for the SBML Level 3 Multistate, Multicomponent and Multicompartment Species package. More...
 
 MultipleAnnotations = _libsbml.MultipleAnnotations
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 MultipleAssignmentOrRateRules = _libsbml.MultipleAssignmentOrRateRules
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 MultipleEventAssignmentsForId = _libsbml.MultipleEventAssignmentsForId
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 MultipleInitAssignments = _libsbml.MultipleInitAssignments
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 MultiplierNotValidAttribute = _libsbml.MultiplierNotValidAttribute
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 MultSpeciesSameTypeInCompartment = _libsbml.MultSpeciesSameTypeInCompartment
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 NameNotValidAttribute = _libsbml.NameNotValidAttribute
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 NeedCompartmentIfHaveSpecies = _libsbml.NeedCompartmentIfHaveSpecies
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 NestedAnnotationNotAllowed = _libsbml.NestedAnnotationNotAllowed
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 NoBodyInFunctionDef = _libsbml.NoBodyInFunctionDef
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 NoCompartmentOutsideInL3v1 = _libsbml.NoCompartmentOutsideInL3v1
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 NoCompartmentTypeInL1 = _libsbml.NoCompartmentTypeInL1
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 NoCompartmentTypeInL2v1 = _libsbml.NoCompartmentTypeInL2v1
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 NoCompartmentTypeInL3v1 = _libsbml.NoCompartmentTypeInL3v1
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 NoConcentrationInZeroD = _libsbml.NoConcentrationInZeroD
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 NoConstraintsInL1 = _libsbml.NoConstraintsInL1
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 NoConstraintsInL2v1 = _libsbml.NoConstraintsInL2v1
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 NoDelayedEventAssignmentInL2v1 = _libsbml.NoDelayedEventAssignmentInL2v1
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 NoDelayedEventAssignmentInL2v2 = _libsbml.NoDelayedEventAssignmentInL2v2
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 NoDelayedEventAssignmentInL2v3 = _libsbml.NoDelayedEventAssignmentInL2v3
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 NoEventsInL1 = _libsbml.NoEventsInL1
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 NoEventTimeUnitsInL2v3 = _libsbml.NoEventTimeUnitsInL2v3
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 NoEventTimeUnitsInL2v4 = _libsbml.NoEventTimeUnitsInL2v4
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 NoEventTimeUnitsInL3v1 = _libsbml.NoEventTimeUnitsInL3v1
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 NoFancyStoichiometryMathInL1 = _libsbml.NoFancyStoichiometryMathInL1
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 NoFunctionDefinitionsInL1 = _libsbml.NoFunctionDefinitionsInL1
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 NoIdOnSpeciesReferenceInL2v1 = _libsbml.NoIdOnSpeciesReferenceInL2v1
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 NoInitialAssignmentsInL1 = _libsbml.NoInitialAssignmentsInL1
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 NoInitialAssignmentsInL2v1 = _libsbml.NoInitialAssignmentsInL2v1
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 NoKineticLawSubstanceUnitsInL2v2 = _libsbml.NoKineticLawSubstanceUnitsInL2v2
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 NoKineticLawSubstanceUnitsInL2v3 = _libsbml.NoKineticLawSubstanceUnitsInL2v3
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 NoKineticLawSubstanceUnitsInL2v4 = _libsbml.NoKineticLawSubstanceUnitsInL2v4
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 NoKineticLawSubstanceUnitsInL3v1 = _libsbml.NoKineticLawSubstanceUnitsInL3v1
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 NoKineticLawTimeUnitsInL2v2 = _libsbml.NoKineticLawTimeUnitsInL2v2
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 NoKineticLawTimeUnitsInL2v3 = _libsbml.NoKineticLawTimeUnitsInL2v3
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 NoKineticLawTimeUnitsInL2v4 = _libsbml.NoKineticLawTimeUnitsInL2v4
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 NoKineticLawTimeUnitsInL3v1 = _libsbml.NoKineticLawTimeUnitsInL3v1
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 NonBoundarySpeciesAssignedAndUsed = _libsbml.NonBoundarySpeciesAssignedAndUsed
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 NonConstantLocalParameter = _libsbml.NonConstantLocalParameter
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 NonConstantSpeciesUsed = _libsbml.NonConstantSpeciesUsed
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 NoNon3DCompartmentsInL1 = _libsbml.NoNon3DCompartmentsInL1
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 NoNonIntegerStoichiometryInL1 = _libsbml.NoNonIntegerStoichiometryInL1
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 NonPersistentNotSupported = _libsbml.NonPersistentNotSupported
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 NoReactantsOrProducts = _libsbml.NoReactantsOrProducts
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 NoSBOTermsInL1 = _libsbml.NoSBOTermsInL1
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 NoSBOTermsInL2v1 = _libsbml.NoSBOTermsInL2v1
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 NoSpatialUnitsInZeroD = _libsbml.NoSpatialUnitsInZeroD
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 NoSpeciesSpatialSizeUnitsInL1 = _libsbml.NoSpeciesSpatialSizeUnitsInL1
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 NoSpeciesSpatialSizeUnitsInL2v3 = _libsbml.NoSpeciesSpatialSizeUnitsInL2v3
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 NoSpeciesSpatialSizeUnitsInL2v4 = _libsbml.NoSpeciesSpatialSizeUnitsInL2v4
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 NoSpeciesSpatialSizeUnitsInL3v1 = _libsbml.NoSpeciesSpatialSizeUnitsInL3v1
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 NoSpeciesTypeInL2v1 = _libsbml.NoSpeciesTypeInL2v1
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 NoSpeciesTypeInL3v1 = _libsbml.NoSpeciesTypeInL3v1
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 NoSpeciesTypesInL1 = _libsbml.NoSpeciesTypesInL1
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 NoStoichiometryMathInL3v1 = _libsbml.NoStoichiometryMathInL3v1
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 NotesContainsDOCTYPE = _libsbml.NotesContainsDOCTYPE
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 NotesContainsXMLDecl = _libsbml.NotesContainsXMLDecl
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 NotesNotInXHTMLNamespace = _libsbml.NotesNotInXHTMLNamespace
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 NoTimeSymbolInFunctionDef = _libsbml.NoTimeSymbolInFunctionDef
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 NotSchemaConformant = _libsbml.NotSchemaConformant
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 NotUTF8 = _libsbml.NotUTF8
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 NoUnitMultipliersOrOffsetsInL1 = _libsbml.NoUnitMultipliersOrOffsetsInL1
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 NoUnitOffsetInL2v2 = _libsbml.NoUnitOffsetInL2v2
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 NoUnitOffsetInL2v3 = _libsbml.NoUnitOffsetInL2v3
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 NoUnitOffsetInL2v4 = _libsbml.NoUnitOffsetInL2v4
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 NoUnitOffsetInL3v1 = _libsbml.NoUnitOffsetInL3v1
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 NoUnitsOnCompartment = _libsbml.NoUnitsOnCompartment
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 NumericOpsNeedNumericArgs = _libsbml.NumericOpsNeedNumericArgs
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 OBJECTIVE_TYPE_MAXIMIZE = _libsbml.OBJECTIVE_TYPE_MAXIMIZE
 fbc One of the possible FluxBound operation types. More...
 
 OBJECTIVE_TYPE_MINIMIZE = _libsbml.OBJECTIVE_TYPE_MINIMIZE
 fbc One of the possible Objective types. More...
 
 OBJECTIVE_TYPE_UNKNOWN = _libsbml.OBJECTIVE_TYPE_UNKNOWN
 fbc One of the possible Objective types. More...
 
 ObseleteSBOTerm = _libsbml.ObseleteSBOTerm
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 OffsetNoLongerValid = _libsbml.OffsetNoLongerValid
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 OffsetNotValidAttribute = _libsbml.OffsetNotValidAttribute
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 OneDimensionalCompartmentUnits = _libsbml.OneDimensionalCompartmentUnits
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 OneListOfEventAssignmentsPerEvent = _libsbml.OneListOfEventAssignmentsPerEvent
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 OneListOfPerKineticLaw = _libsbml.OneListOfPerKineticLaw
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 OneListOfUnitsPerUnitDef = _libsbml.OneListOfUnitsPerUnitDef
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 OneMathElementPerConstraint = _libsbml.OneMathElementPerConstraint
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 OneMathElementPerFunc = _libsbml.OneMathElementPerFunc
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 OneMathElementPerInitialAssign = _libsbml.OneMathElementPerInitialAssign
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 OneMathElementPerRule = _libsbml.OneMathElementPerRule
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 OneMathPerDelay = _libsbml.OneMathPerDelay
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 OneMathPerEventAssignment = _libsbml.OneMathPerEventAssignment
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 OneMathPerKineticLaw = _libsbml.OneMathPerKineticLaw
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 OneMathPerPriority = _libsbml.OneMathPerPriority
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 OneMathPerTrigger = _libsbml.OneMathPerTrigger
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 OneMessageElementPerConstraint = _libsbml.OneMessageElementPerConstraint
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 OneOfEachListOf = _libsbml.OneOfEachListOf
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 OneSubElementPerReaction = _libsbml.OneSubElementPerReaction
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 OnlyCiInsideBVar = _OnlyCiInsideBVar
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 OnlyCompartmentsInListOfCompartments = _libsbml.OnlyCompartmentsInListOfCompartments
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 OnlyConstraintsInListOfConstraints = _libsbml.OnlyConstraintsInListOfConstraints
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 OnlyEventAssignInListOfEventAssign = _libsbml.OnlyEventAssignInListOfEventAssign
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 OnlyEventsInListOfEvents = _libsbml.OnlyEventsInListOfEvents
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 OnlyFuncDefsInListOfFuncDefs = _libsbml.OnlyFuncDefsInListOfFuncDefs
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 OnlyInitAssignsInListOfInitAssigns = _libsbml.OnlyInitAssignsInListOfInitAssigns
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 OnlyLocalParamsInListOfLocalParams = _libsbml.OnlyLocalParamsInListOfLocalParams
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 OnlyOneDelayPerEvent = _libsbml.OnlyOneDelayPerEvent
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 OnlyOneNotesElementAllowed = _libsbml.OnlyOneNotesElementAllowed
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 OnlyOnePriorityPerEvent = _libsbml.OnlyOnePriorityPerEvent
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 OnlyParametersInListOfParameters = _libsbml.OnlyParametersInListOfParameters
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 OnlyReactionsInListOfReactions = _libsbml.OnlyReactionsInListOfReactions
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 OnlyRulesInListOfRules = _libsbml.OnlyRulesInListOfRules
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 OnlySpeciesInListOfSpecies = _libsbml.OnlySpeciesInListOfSpecies
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 OnlyUnitDefsInListOfUnitDefs = _libsbml.OnlyUnitDefsInListOfUnitDefs
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 OnlyUnitsInListOfUnits = _libsbml.OnlyUnitsInListOfUnits
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 OperationInterrupted = _OperationInterrupted
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 OpsNeedCorrectNumberOfArgs = _libsbml.OpsNeedCorrectNumberOfArgs
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 OR_ASSOCIATION = _libsbml.OR_ASSOCIATION
 fbc One of the possible Association types. More...
 
 OUTPUT_TRANSITION_EFFECT_ASSIGNMENT_LEVEL = _libsbml.OUTPUT_TRANSITION_EFFECT_ASSIGNMENT_LEVEL
 qual One of the possible OutputTransition "transitionEffect" attribute values. More...
 
 OUTPUT_TRANSITION_EFFECT_PRODUCTION = _libsbml.OUTPUT_TRANSITION_EFFECT_PRODUCTION
 long More...
 
 OUTPUT_TRANSITION_EFFECT_UNKNOWN = _libsbml.OUTPUT_TRANSITION_EFFECT_UNKNOWN
 qual One of the possible OutputTransition "transitionEffect" attribute values. More...
 
 OverdeterminedSystem = _libsbml.OverdeterminedSystem
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 PackageConversionNotSupported = _libsbml.PackageConversionNotSupported
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 PackageNSMustMatch = _libsbml.PackageNSMustMatch
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 PackageRequiredShouldBeFalse = _libsbml.PackageRequiredShouldBeFalse
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 ParameterShouldHaveUnits = _libsbml.ParameterShouldHaveUnits
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 ParameterShouldHaveValue = _libsbml.ParameterShouldHaveValue
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 ParameterUnits = _libsbml.ParameterUnits
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 PersistentNotBoolean = _libsbml.PersistentNotBoolean
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 PieceNeedsBoolean = _libsbml.PieceNeedsBoolean
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 PiecewiseNeedsConsistentTypes = _libsbml.PiecewiseNeedsConsistentTypes
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 PriorityLostFromL3 = _libsbml.PriorityLostFromL3
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 PriorityUnitsNotDimensionless = _libsbml.PriorityUnitsNotDimensionless
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 QualAttributeRequiredMissing = _libsbml.QualAttributeRequiredMissing
 qual A value in the enumeration of all the error and warning codes generated by the libSBML “qual” extension for objects of class SBMLError. More...
 
 QualAttributeRequiredMustBeBoolean = _libsbml.QualAttributeRequiredMustBeBoolean
 qual A value in the enumeration of all the error and warning codes generated by the libSBML “qual” extension for objects of class SBMLError. More...
 
 QualCompartmentMustReferExisting = _libsbml.QualCompartmentMustReferExisting
 qual A value in the enumeration of all the error and warning codes generated by the libSBML “qual” extension for objects of class SBMLError. More...
 
 QualConstantMustBeBool = _libsbml.QualConstantMustBeBool
 qual A value in the enumeration of all the error and warning codes generated by the libSBML “qual” extension for objects of class SBMLError. More...
 
 QualConstantQSCannotBeOutput = _libsbml.QualConstantQSCannotBeOutput
 qual A value in the enumeration of all the error and warning codes generated by the libSBML “qual” extension for objects of class SBMLError. More...
 
 QualDefaultTermAllowedAttributes = _libsbml.QualDefaultTermAllowedAttributes
 qual A value in the enumeration of all the error and warning codes generated by the libSBML “qual” extension for objects of class SBMLError. More...
 
 QualDefaultTermAllowedCoreAttributes = _libsbml.QualDefaultTermAllowedCoreAttributes
 qual A value in the enumeration of all the error and warning codes generated by the libSBML “qual” extension for objects of class SBMLError. More...
 
 QualDefaultTermAllowedElements = _libsbml.QualDefaultTermAllowedElements
 qual A value in the enumeration of all the error and warning codes generated by the libSBML “qual” extension for objects of class SBMLError. More...
 
 QualDefaultTermResultMustBeInteger = _libsbml.QualDefaultTermResultMustBeInteger
 qual A value in the enumeration of all the error and warning codes generated by the libSBML “qual” extension for objects of class SBMLError. More...
 
 QualDefaultTermResultMustBeNonNeg = _libsbml.QualDefaultTermResultMustBeNonNeg
 qual A value in the enumeration of all the error and warning codes generated by the libSBML “qual” extension for objects of class SBMLError. More...
 
 QualDuplicateComponentId = _libsbml.QualDuplicateComponentId
 qual A value in the enumeration of all the error and warning codes generated by the libSBML “qual” extension for objects of class SBMLError. More...
 
 QualElementNotInNs = _libsbml.QualElementNotInNs
 qual A value in the enumeration of all the error and warning codes generated by the libSBML “qual” extension for objects of class SBMLError. More...
 
 QualEmptyLONotAllowed = _libsbml.QualEmptyLONotAllowed
 qual A value in the enumeration of all the error and warning codes generated by the libSBML “qual” extension for objects of class SBMLError. More...
 
 QualFuncTermAllowedAttributes = _libsbml.QualFuncTermAllowedAttributes
 qual A value in the enumeration of all the error and warning codes generated by the libSBML “qual” extension for objects of class SBMLError. More...
 
 QualFuncTermAllowedCoreAttributes = _libsbml.QualFuncTermAllowedCoreAttributes
 qual A value in the enumeration of all the error and warning codes generated by the libSBML “qual” extension for objects of class SBMLError. More...
 
 QualFuncTermAllowedElements = _libsbml.QualFuncTermAllowedElements
 qual A value in the enumeration of all the error and warning codes generated by the libSBML “qual” extension for objects of class SBMLError. More...
 
 QualFuncTermOnlyOneMath = _libsbml.QualFuncTermOnlyOneMath
 qual A value in the enumeration of all the error and warning codes generated by the libSBML “qual” extension for objects of class SBMLError. More...
 
 QualFuncTermResultMustBeInteger = _libsbml.QualFuncTermResultMustBeInteger
 qual A value in the enumeration of all the error and warning codes generated by the libSBML “qual” extension for objects of class SBMLError. More...
 
 QualFuncTermResultMustBeNonNeg = _libsbml.QualFuncTermResultMustBeNonNeg
 qual A value in the enumeration of all the error and warning codes generated by the libSBML “qual” extension for objects of class SBMLError. More...
 
 QualFunctionTermBool = _libsbml.QualFunctionTermBool
 qual A value in the enumeration of all the error and warning codes generated by the libSBML “qual” extension for objects of class SBMLError. More...
 
 QualInitalLevelNotNegative = _libsbml.QualInitalLevelNotNegative
 qual A value in the enumeration of all the error and warning codes generated by the libSBML “qual” extension for objects of class SBMLError. More...
 
 QualInitialLevelCannotExceedMax = _libsbml.QualInitialLevelCannotExceedMax
 qual A value in the enumeration of all the error and warning codes generated by the libSBML “qual” extension for objects of class SBMLError. More...
 
 QualInitialLevelMustBeInt = _libsbml.QualInitialLevelMustBeInt
 qual A value in the enumeration of all the error and warning codes generated by the libSBML “qual” extension for objects of class SBMLError. More...
 
 QualInputAllowedAttributes = _libsbml.QualInputAllowedAttributes
 qual A value in the enumeration of all the error and warning codes generated by the libSBML “qual” extension for objects of class SBMLError. More...
 
 QualInputAllowedCoreAttributes = _libsbml.QualInputAllowedCoreAttributes
 qual A value in the enumeration of all the error and warning codes generated by the libSBML “qual” extension for objects of class SBMLError. More...
 
 QualInputAllowedElements = _libsbml.QualInputAllowedElements
 qual A value in the enumeration of all the error and warning codes generated by the libSBML “qual” extension for objects of class SBMLError. More...
 
 QualInputConstantCannotBeConsumed = _libsbml.QualInputConstantCannotBeConsumed
 qual A value in the enumeration of all the error and warning codes generated by the libSBML “qual” extension for objects of class SBMLError. More...
 
 QualInputNameMustBeString = _libsbml.QualInputNameMustBeString
 qual A value in the enumeration of all the error and warning codes generated by the libSBML “qual” extension for objects of class SBMLError. More...
 
 QualInputQSMustBeExistingQS = _libsbml.QualInputQSMustBeExistingQS
 qual A value in the enumeration of all the error and warning codes generated by the libSBML “qual” extension for objects of class SBMLError. More...
 
 QualInputSignMustBeSignEnum = _libsbml.QualInputSignMustBeSignEnum
 qual A value in the enumeration of all the error and warning codes generated by the libSBML “qual” extension for objects of class SBMLError. More...
 
 QualInputThreshMustBeInteger = _libsbml.QualInputThreshMustBeInteger
 qual A value in the enumeration of all the error and warning codes generated by the libSBML “qual” extension for objects of class SBMLError. More...
 
 QualInputThreshMustBeNonNegative = _libsbml.QualInputThreshMustBeNonNegative
 qual A value in the enumeration of all the error and warning codes generated by the libSBML “qual” extension for objects of class SBMLError. More...
 
 QualInputTransEffectMustBeInputEffect = _libsbml.QualInputTransEffectMustBeInputEffect
 qual A value in the enumeration of all the error and warning codes generated by the libSBML “qual” extension for objects of class SBMLError. More...
 
 QualLOQualSpeciesAllowedAttributes = _libsbml.QualLOQualSpeciesAllowedAttributes
 qual A value in the enumeration of all the error and warning codes generated by the libSBML “qual” extension for objects of class SBMLError. More...
 
 QualLOQualSpeciesAllowedElements = _libsbml.QualLOQualSpeciesAllowedElements
 qual A value in the enumeration of all the error and warning codes generated by the libSBML “qual” extension for objects of class SBMLError. More...
 
 QualLOTransitiondAllowedElements = _libsbml.QualLOTransitiondAllowedElements
 qual A value in the enumeration of all the error and warning codes generated by the libSBML “qual” extension for objects of class SBMLError. More...
 
 QualLOTransitionsAllowedAttributes = _libsbml.QualLOTransitionsAllowedAttributes
 qual A value in the enumeration of all the error and warning codes generated by the libSBML “qual” extension for objects of class SBMLError. More...
 
 QualMathCSymbolDisallowed = _libsbml.QualMathCSymbolDisallowed
 qual A value in the enumeration of all the error and warning codes generated by the libSBML “qual” extension for objects of class SBMLError. More...
 
 QualMaxLevelMustBeInt = _libsbml.QualMaxLevelMustBeInt
 qual A value in the enumeration of all the error and warning codes generated by the libSBML “qual” extension for objects of class SBMLError. More...
 
 QualMaxLevelNotNegative = _libsbml.QualMaxLevelNotNegative
 qual A value in the enumeration of all the error and warning codes generated by the libSBML “qual” extension for objects of class SBMLError. More...
 
 QualNameMustBeString = _libsbml.QualNameMustBeString
 qual A value in the enumeration of all the error and warning codes generated by the libSBML “qual” extension for objects of class SBMLError. More...
 
 QualNSUndeclared = _libsbml.QualNSUndeclared
 qual A value in the enumeration of all the error and warning codes generated by the libSBML “qual” extension for objects of class SBMLError. More...
 
 QualOneListOfTransOrQS = _libsbml.QualOneListOfTransOrQS
 qual A value in the enumeration of all the error and warning codes generated by the libSBML “qual” extension for objects of class SBMLError. More...
 
 QualOutputAllowedAttributes = _libsbml.QualOutputAllowedAttributes
 qual A value in the enumeration of all the error and warning codes generated by the libSBML “qual” extension for objects of class SBMLError. More...
 
 QualOutputAllowedCoreAttributes = _libsbml.QualOutputAllowedCoreAttributes
 qual A value in the enumeration of all the error and warning codes generated by the libSBML “qual” extension for objects of class SBMLError. More...
 
 QualOutputAllowedElements = _libsbml.QualOutputAllowedElements
 qual A value in the enumeration of all the error and warning codes generated by the libSBML “qual” extension for objects of class SBMLError. More...
 
 QualOutputConstantMustBeFalse = _libsbml.QualOutputConstantMustBeFalse
 qual A value in the enumeration of all the error and warning codes generated by the libSBML “qual” extension for objects of class SBMLError. More...
 
 QualOutputLevelMustBeInteger = _libsbml.QualOutputLevelMustBeInteger
 qual A value in the enumeration of all the error and warning codes generated by the libSBML “qual” extension for objects of class SBMLError. More...
 
 QualOutputLevelMustBeNonNegative = _libsbml.QualOutputLevelMustBeNonNegative
 qual A value in the enumeration of all the error and warning codes generated by the libSBML “qual” extension for objects of class SBMLError. More...
 
 QualOutputNameMustBeString = _libsbml.QualOutputNameMustBeString
 qual A value in the enumeration of all the error and warning codes generated by the libSBML “qual” extension for objects of class SBMLError. More...
 
 QualOutputProductionMustHaveLevel = _libsbml.QualOutputProductionMustHaveLevel
 qual A value in the enumeration of all the error and warning codes generated by the libSBML “qual” extension for objects of class SBMLError. More...
 
 QualOutputQSMustBeExistingQS = _libsbml.QualOutputQSMustBeExistingQS
 qual A value in the enumeration of all the error and warning codes generated by the libSBML “qual” extension for objects of class SBMLError. More...
 
 QualOutputTransEffectMustBeOutput = _libsbml.QualOutputTransEffectMustBeOutput
 qual A value in the enumeration of all the error and warning codes generated by the libSBML “qual” extension for objects of class SBMLError. More...
 
 QualQSAssignedOnlyOnce = _libsbml.QualQSAssignedOnlyOnce
 qual A value in the enumeration of all the error and warning codes generated by the libSBML “qual” extension for objects of class SBMLError. More...
 
 QualQualSpeciesAllowedAttributes = _libsbml.QualQualSpeciesAllowedAttributes
 qual A value in the enumeration of all the error and warning codes generated by the libSBML “qual” extension for objects of class SBMLError. More...
 
 QualQualSpeciesAllowedCoreAttributes = _libsbml.QualQualSpeciesAllowedCoreAttributes
 qual A value in the enumeration of all the error and warning codes generated by the libSBML “qual” extension for objects of class SBMLError. More...
 
 QualQualSpeciesAllowedElements = _libsbml.QualQualSpeciesAllowedElements
 qual A value in the enumeration of all the error and warning codes generated by the libSBML “qual” extension for objects of class SBMLError. More...
 
 QualRequiredTrueIfTransitions = _libsbml.QualRequiredTrueIfTransitions
 qual A value in the enumeration of all the error and warning codes generated by the libSBML “qual” extension for objects of class SBMLError. More...
 
 QualTransitionAllowedAttributes = _libsbml.QualTransitionAllowedAttributes
 qual A value in the enumeration of all the error and warning codes generated by the libSBML “qual” extension for objects of class SBMLError. More...
 
 QualTransitionAllowedCoreAttributes = _libsbml.QualTransitionAllowedCoreAttributes
 qual A value in the enumeration of all the error and warning codes generated by the libSBML “qual” extension for objects of class SBMLError. More...
 
 QualTransitionAllowedElements = _libsbml.QualTransitionAllowedElements
 qual A value in the enumeration of all the error and warning codes generated by the libSBML “qual” extension for objects of class SBMLError. More...
 
 QualTransitionEmptyLOElements = _libsbml.QualTransitionEmptyLOElements
 qual A value in the enumeration of all the error and warning codes generated by the libSBML “qual” extension for objects of class SBMLError. More...
 
 QualTransitionLOElements = _libsbml.QualTransitionLOElements
 qual A value in the enumeration of all the error and warning codes generated by the libSBML “qual” extension for objects of class SBMLError. More...
 
 QualTransitionLOFuncTermAttributes = _libsbml.QualTransitionLOFuncTermAttributes
 qual A value in the enumeration of all the error and warning codes generated by the libSBML “qual” extension for objects of class SBMLError. More...
 
 QualTransitionLOFuncTermElements = _libsbml.QualTransitionLOFuncTermElements
 qual A value in the enumeration of all the error and warning codes generated by the libSBML “qual” extension for objects of class SBMLError. More...
 
 QualTransitionLOFuncTermExceedMax = _libsbml.QualTransitionLOFuncTermExceedMax
 qual A value in the enumeration of all the error and warning codes generated by the libSBML “qual” extension for objects of class SBMLError. More...
 
 QualTransitionLOFuncTermNegative = _libsbml.QualTransitionLOFuncTermNegative
 qual A value in the enumeration of all the error and warning codes generated by the libSBML “qual” extension for objects of class SBMLError. More...
 
 QualTransitionLOInputAttributes = _libsbml.QualTransitionLOInputAttributes
 qual A value in the enumeration of all the error and warning codes generated by the libSBML “qual” extension for objects of class SBMLError. More...
 
 QualTransitionLOInputElements = _libsbml.QualTransitionLOInputElements
 qual A value in the enumeration of all the error and warning codes generated by the libSBML “qual” extension for objects of class SBMLError. More...
 
 QualTransitionLOOutputAttributes = _libsbml.QualTransitionLOOutputAttributes
 qual A value in the enumeration of all the error and warning codes generated by the libSBML “qual” extension for objects of class SBMLError. More...
 
 QualTransitionLOOutputElements = _libsbml.QualTransitionLOOutputElements
 qual A value in the enumeration of all the error and warning codes generated by the libSBML “qual” extension for objects of class SBMLError. More...
 
 QualTransitionNameMustBeString = _libsbml.QualTransitionNameMustBeString
 qual A value in the enumeration of all the error and warning codes generated by the libSBML “qual” extension for objects of class SBMLError. More...
 
 QualUnknown = _libsbml.QualUnknown
 long More...
 
 RateOfSpeciesTargetCompartmentNot = _libsbml.RateOfSpeciesTargetCompartmentNot
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 RateOfTargetCannotBeAssigned = _libsbml.RateOfTargetCannotBeAssigned
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 RateOfTargetMustBeCi = _libsbml.RateOfTargetMustBeCi
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 RateRuleCompartmentMismatch = _libsbml.RateRuleCompartmentMismatch
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 RateRuleForConstantEntity = _libsbml.RateRuleForConstantEntity
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 RateRuleParameterMismatch = _libsbml.RateRuleParameterMismatch
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 RateRuleSpeciesMismatch = _libsbml.RateRuleSpeciesMismatch
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 RateRuleStoichiometryMismatch = _libsbml.RateRuleStoichiometryMismatch
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 RDFAboutTagNotMetaid = _libsbml.RDFAboutTagNotMetaid
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 RDFEmptyAboutTag = _libsbml.RDFEmptyAboutTag
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 RDFMissingAboutTag = _libsbml.RDFMissingAboutTag
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 RDFNotCompleteModelHistory = _libsbml.RDFNotCompleteModelHistory
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 RDFNotModelHistory = _libsbml.RDFNotModelHistory
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 RecursiveCompartmentContainment = _libsbml.RecursiveCompartmentContainment
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 RecursiveFunctionDefinition = _libsbml.RecursiveFunctionDefinition
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 RepeatedRule10304 = _libsbml.RepeatedRule10304
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 RepeatedRule20611 = _libsbml.RepeatedRule20611
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 RequiredPackagePresent = _libsbml.RequiredPackagePresent
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 RULE_TYPE_INVALID = _libsbml.RULE_TYPE_INVALID
 One of the possible SBML Rule object types. More...
 
 RULE_TYPE_RATE = _libsbml.RULE_TYPE_RATE
 One of the possible SBML Rule object types. More...
 
 RULE_TYPE_SCALAR = _libsbml.RULE_TYPE_SCALAR
 One of the possible SBML Rule object types. More...
 
 RuleCannotRef0DComp = _libsbml.RuleCannotRef0DComp
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 SBML_ALGEBRAIC_RULE = _libsbml.SBML_ALGEBRAIC_RULE
 One of the possible SBML component type codes. More...
 
 SBML_ASSIGNMENT_RULE = _libsbml.SBML_ASSIGNMENT_RULE
 One of the possible SBML component type codes. More...
 
 SBML_COMP_DELETION = _libsbml.SBML_COMP_DELETION
 comp One of the possible SBML component type codes. More...
 
 SBML_COMP_EXTERNALMODELDEFINITION = _libsbml.SBML_COMP_EXTERNALMODELDEFINITION
 comp One of the possible SBML component type codes. More...
 
 SBML_COMP_MODELDEFINITION = _libsbml.SBML_COMP_MODELDEFINITION
 comp One of the possible SBML component type codes. More...
 
 SBML_COMP_PORT = _libsbml.SBML_COMP_PORT
 comp One of the possible SBML component type codes. More...
 
 SBML_COMP_REPLACEDBY = _libsbml.SBML_COMP_REPLACEDBY
 comp One of the possible SBML component type codes. More...
 
 SBML_COMP_REPLACEDELEMENT = _libsbml.SBML_COMP_REPLACEDELEMENT
 
 SBML_COMP_SBASEREF = _libsbml.SBML_COMP_SBASEREF
 comp One of the possible SBML component type codes. More...
 
 SBML_COMP_SUBMODEL = _libsbml.SBML_COMP_SUBMODEL
 long More...
 
 SBML_COMPARTMENT = _libsbml.SBML_COMPARTMENT
 One of the possible SBML component type codes. More...
 
 SBML_COMPARTMENT_TYPE = _libsbml.SBML_COMPARTMENT_TYPE
 One of the possible SBML component type codes. More...
 
 SBML_COMPARTMENT_VOLUME_RULE = _libsbml.SBML_COMPARTMENT_VOLUME_RULE
 One of the possible SBML component type codes. More...
 
 SBML_CONSTRAINT = _libsbml.SBML_CONSTRAINT
 One of the possible SBML component type codes. More...
 
 SBML_DELAY = _libsbml.SBML_DELAY
 One of the possible SBML component type codes. More...
 
 SBML_DOCUMENT = _libsbml.SBML_DOCUMENT
 One of the possible SBML component type codes. More...
 
 SBML_EVENT = _libsbml.SBML_EVENT
 One of the possible SBML component type codes. More...
 
 SBML_EVENT_ASSIGNMENT = _libsbml.SBML_EVENT_ASSIGNMENT
 One of the possible SBML component type codes. More...
 
 SBML_FBC_AND = _libsbml.SBML_FBC_AND
 fbc One of the possible SBML component type codes. More...
 
 SBML_FBC_ASSOCIATION = _libsbml.SBML_FBC_ASSOCIATION
 fbc One of the possible SBML component type codes. More...
 
 SBML_FBC_FLUXBOUND = _libsbml.SBML_FBC_FLUXBOUND
 fbc One of the possible SBML component type codes. More...
 
 SBML_FBC_FLUXOBJECTIVE = _libsbml.SBML_FBC_FLUXOBJECTIVE
 fbc One of the possible SBML component type codes. More...
 
 SBML_FBC_GENEASSOCIATION = _libsbml.SBML_FBC_GENEASSOCIATION
 fbc One of the possible SBML component type codes. More...
 
 SBML_FBC_GENEPRODUCT = _libsbml.SBML_FBC_GENEPRODUCT
 fbc One of the possible SBML component type codes. More...
 
 SBML_FBC_GENEPRODUCTASSOCIATION = _libsbml.SBML_FBC_GENEPRODUCTASSOCIATION
 fbc One of the possible SBML component type codes. More...
 
 SBML_FBC_GENEPRODUCTREF = _libsbml.SBML_FBC_GENEPRODUCTREF
 fbc One of the possible SBML component type codes. More...
 
 SBML_FBC_OBJECTIVE = _libsbml.SBML_FBC_OBJECTIVE
 fbc One of the possible SBML component type codes. More...
 
 SBML_FBC_OR = _libsbml.SBML_FBC_OR
 fbc One of the possible SBML component type codes. More...
 
 SBML_FBC_V1ASSOCIATION = _libsbml.SBML_FBC_V1ASSOCIATION
 long More...
 
 SBML_FUNCTION_DEFINITION = _libsbml.SBML_FUNCTION_DEFINITION
 One of the possible SBML component type codes. More...
 
 SBML_GROUPS_GROUP = _libsbml.SBML_GROUPS_GROUP
 groups One of the possible SBML component type codes. More...
 
 SBML_GROUPS_MEMBER = _libsbml.SBML_GROUPS_MEMBER
 long More...
 
 SBML_INITIAL_ASSIGNMENT = _libsbml.SBML_INITIAL_ASSIGNMENT
 One of the possible SBML component type codes. More...
 
 SBML_KINETIC_LAW = _libsbml.SBML_KINETIC_LAW
 One of the possible SBML component type codes. More...
 
 SBML_LAYOUT_BOUNDINGBOX = _libsbml.SBML_LAYOUT_BOUNDINGBOX
 long More...
 
 SBML_LAYOUT_COMPARTMENTGLYPH = _libsbml.SBML_LAYOUT_COMPARTMENTGLYPH
 layout One of the possible SBML component type codes. More...
 
 SBML_LAYOUT_CUBICBEZIER = _libsbml.SBML_LAYOUT_CUBICBEZIER
 layout One of the possible SBML component type codes. More...
 
 SBML_LAYOUT_CURVE = _libsbml.SBML_LAYOUT_CURVE
 layout One of the possible SBML component type codes. More...
 
 SBML_LAYOUT_DIMENSIONS = _libsbml.SBML_LAYOUT_DIMENSIONS
 layout One of the possible SBML component type codes. More...
 
 SBML_LAYOUT_GENERALGLYPH = _libsbml.SBML_LAYOUT_GENERALGLYPH
 layout One of the possible SBML component type codes. More...
 
 SBML_LAYOUT_GRAPHICALOBJECT = _libsbml.SBML_LAYOUT_GRAPHICALOBJECT
 layout One of the possible SBML component type codes. More...
 
 SBML_LAYOUT_LAYOUT = _libsbml.SBML_LAYOUT_LAYOUT
 layout One of the possible SBML component type codes. More...
 
 SBML_LAYOUT_LINESEGMENT = _libsbml.SBML_LAYOUT_LINESEGMENT
 layout One of the possible SBML component type codes. More...
 
 SBML_LAYOUT_POINT = _libsbml.SBML_LAYOUT_POINT
 layout One of the possible SBML component type codes. More...
 
 SBML_LAYOUT_REACTIONGLYPH = _libsbml.SBML_LAYOUT_REACTIONGLYPH
 layout One of the possible SBML component type codes. More...
 
 SBML_LAYOUT_REFERENCEGLYPH = _libsbml.SBML_LAYOUT_REFERENCEGLYPH
 layout One of the possible SBML component type codes. More...
 
 SBML_LAYOUT_SPECIESGLYPH = _libsbml.SBML_LAYOUT_SPECIESGLYPH
 layout One of the possible SBML component type codes. More...
 
 SBML_LAYOUT_SPECIESREFERENCEGLYPH = _libsbml.SBML_LAYOUT_SPECIESREFERENCEGLYPH
 layout One of the possible SBML component type codes. More...
 
 SBML_LAYOUT_TEXTGLYPH = _libsbml.SBML_LAYOUT_TEXTGLYPH
 layout One of the possible SBML component type codes. More...
 
 SBML_LIST_OF = _libsbml.SBML_LIST_OF
 One of the possible SBML component type codes. More...
 
 SBML_LOCAL_PARAMETER = _libsbml.SBML_LOCAL_PARAMETER
 One of the possible SBML component type codes. More...
 
 SBML_MODEL = _libsbml.SBML_MODEL
 One of the possible SBML component type codes. More...
 
 SBML_MODIFIER_SPECIES_REFERENCE = _libsbml.SBML_MODIFIER_SPECIES_REFERENCE
 One of the possible SBML component type codes. More...
 
 SBML_MULTI_BINDING_SITE_SPECIES_TYPE = _libsbml.SBML_MULTI_BINDING_SITE_SPECIES_TYPE
 multi A value in an enumeration defined by the libSBML “multi” extension to implement functionality for the SBML Level 3 Multistate, Multicomponent and Multicompartment Species package. More...
 
 SBML_MULTI_COMPARTMENT_REFERENCE = _libsbml.SBML_MULTI_COMPARTMENT_REFERENCE
 multi A value in an enumeration defined by the libSBML “multi” extension to implement functionality for the SBML Level 3 Multistate, Multicomponent and Multicompartment Species package. More...
 
 SBML_MULTI_IN_SPECIES_TYPE_BOND = _libsbml.SBML_MULTI_IN_SPECIES_TYPE_BOND
 multi A value in an enumeration defined by the libSBML “multi” extension to implement functionality for the SBML Level 3 Multistate, Multicomponent and Multicompartment Species package. More...
 
 SBML_MULTI_INTRA_SPECIES_REACTION = _libsbml.SBML_MULTI_INTRA_SPECIES_REACTION
 multi A value in an enumeration defined by the libSBML “multi” extension to implement functionality for the SBML Level 3 Multistate, Multicomponent and Multicompartment Species package. More...
 
 SBML_MULTI_OUTWARD_BINDING_SITE = _libsbml.SBML_MULTI_OUTWARD_BINDING_SITE
 multi A value in an enumeration defined by the libSBML “multi” extension to implement functionality for the SBML Level 3 Multistate, Multicomponent and Multicompartment Species package. More...
 
 SBML_MULTI_POSSIBLE_SPECIES_FEATURE_VALUE = _libsbml.SBML_MULTI_POSSIBLE_SPECIES_FEATURE_VALUE
 multi A value in an enumeration defined by the libSBML “multi” extension to implement functionality for the SBML Level 3 Multistate, Multicomponent and Multicompartment Species package. More...
 
 SBML_MULTI_SPECIES_FEATURE = _libsbml.SBML_MULTI_SPECIES_FEATURE
 multi A value in an enumeration defined by the libSBML “multi” extension to implement functionality for the SBML Level 3 Multistate, Multicomponent and Multicompartment Species package. More...
 
 SBML_MULTI_SPECIES_FEATURE_TYPE = _libsbml.SBML_MULTI_SPECIES_FEATURE_TYPE
 multi A value in an enumeration defined by the libSBML “multi” extension to implement functionality for the SBML Level 3 Multistate, Multicomponent and Multicompartment Species package. More...
 
 SBML_MULTI_SPECIES_FEATURE_VALUE = _libsbml.SBML_MULTI_SPECIES_FEATURE_VALUE
 multi A value in an enumeration defined by the libSBML “multi” extension to implement functionality for the SBML Level 3 Multistate, Multicomponent and Multicompartment Species package. More...
 
 SBML_MULTI_SPECIES_TYPE = _libsbml.SBML_MULTI_SPECIES_TYPE
 multi A value in an enumeration defined by the libSBML “multi” extension to implement functionality for the SBML Level 3 Multistate, Multicomponent and Multicompartment Species package. More...
 
 SBML_MULTI_SPECIES_TYPE_COMPONENT_INDEX = _libsbml.SBML_MULTI_SPECIES_TYPE_COMPONENT_INDEX
 multi A value in an enumeration defined by the libSBML “multi” extension to implement functionality for the SBML Level 3 Multistate, Multicomponent and Multicompartment Species package. More...
 
 SBML_MULTI_SPECIES_TYPE_COMPONENT_MAP_IN_PRODUCT = _libsbml.SBML_MULTI_SPECIES_TYPE_COMPONENT_MAP_IN_PRODUCT
 multi A value in an enumeration defined by the libSBML “multi” extension to implement functionality for the SBML Level 3 Multistate, Multicomponent and Multicompartment Species package. More...
 
 SBML_MULTI_SPECIES_TYPE_INSTANCE = _libsbml.SBML_MULTI_SPECIES_TYPE_INSTANCE
 multi A value in an enumeration defined by the libSBML “multi” extension to implement functionality for the SBML Level 3 Multistate, Multicomponent and Multicompartment Species package. More...
 
 SBML_MULTI_SUBLIST_OF_SPECIES_FEATURES = _libsbml.SBML_MULTI_SUBLIST_OF_SPECIES_FEATURES
 multi A value in an enumeration defined by the libSBML “multi” extension to implement functionality for the SBML Level 3 Multistate, Multicomponent and Multicompartment Species package. More...
 
 SBML_PARAMETER = _libsbml.SBML_PARAMETER
 One of the possible SBML component type codes. More...
 
 SBML_PARAMETER_RULE = _libsbml.SBML_PARAMETER_RULE
 One of the possible SBML component type codes. More...
 
 SBML_PRIORITY = _libsbml.SBML_PRIORITY
 One of the possible SBML component type codes. More...
 
 SBML_QUAL_DEFAULT_TERM = _libsbml.SBML_QUAL_DEFAULT_TERM
 qual One of the possible SBML component type codes. More...
 
 SBML_QUAL_FUNCTION_TERM = _libsbml.SBML_QUAL_FUNCTION_TERM
 qual One of the possible SBML component type codes. More...
 
 SBML_QUAL_INPUT = _libsbml.SBML_QUAL_INPUT
 qual One of the possible SBML component type codes. More...
 
 SBML_QUAL_OUTPUT = _libsbml.SBML_QUAL_OUTPUT
 qual One of the possible SBML component type codes. More...
 
 SBML_QUAL_QUALITATIVE_SPECIES = _libsbml.SBML_QUAL_QUALITATIVE_SPECIES
 long More...
 
 SBML_QUAL_TRANSITION = _libsbml.SBML_QUAL_TRANSITION
 qual One of the possible SBML component type codes. More...
 
 SBML_RATE_RULE = _libsbml.SBML_RATE_RULE
 One of the possible SBML component type codes. More...
 
 SBML_REACTION = _libsbml.SBML_REACTION
 One of the possible SBML component type codes. More...
 
 SBML_RENDER_COLORDEFINITION = _libsbml.SBML_RENDER_COLORDEFINITION
 render A value in an enumeration defined by the libSBML “render” extension to implement functionality for the SBML Level 3 Render package. More...
 
 SBML_RENDER_CUBICBEZIER = _libsbml.SBML_RENDER_CUBICBEZIER
 render A value in an enumeration defined by the libSBML “render” extension to implement functionality for the SBML Level 3 Render package. More...
 
 SBML_RENDER_CURVE = _libsbml.SBML_RENDER_CURVE
 render A value in an enumeration defined by the libSBML “render” extension to implement functionality for the SBML Level 3 Render package. More...
 
 SBML_RENDER_DEFAULTS = _libsbml.SBML_RENDER_DEFAULTS
 render A value in an enumeration defined by the libSBML “render” extension to implement functionality for the SBML Level 3 Render package. More...
 
 SBML_RENDER_ELLIPSE = _libsbml.SBML_RENDER_ELLIPSE
 render A value in an enumeration defined by the libSBML “render” extension to implement functionality for the SBML Level 3 Render package. More...
 
 SBML_RENDER_GLOBALRENDERINFORMATION = _libsbml.SBML_RENDER_GLOBALRENDERINFORMATION
 render A value in an enumeration defined by the libSBML “render” extension to implement functionality for the SBML Level 3 Render package. More...
 
 SBML_RENDER_GLOBALSTYLE = _libsbml.SBML_RENDER_GLOBALSTYLE
 render A value in an enumeration defined by the libSBML “render” extension to implement functionality for the SBML Level 3 Render package. More...
 
 SBML_RENDER_GRADIENT_STOP = _libsbml.SBML_RENDER_GRADIENT_STOP
 render A value in an enumeration defined by the libSBML “render” extension to implement functionality for the SBML Level 3 Render package. More...
 
 SBML_RENDER_GRADIENTDEFINITION = _libsbml.SBML_RENDER_GRADIENTDEFINITION
 render A value in an enumeration defined by the libSBML “render” extension to implement functionality for the SBML Level 3 Render package. More...
 
 SBML_RENDER_GRAPHICALPRIMITIVE1D = _libsbml.SBML_RENDER_GRAPHICALPRIMITIVE1D
 render A value in an enumeration defined by the libSBML “render” extension to implement functionality for the SBML Level 3 Render package. More...
 
 SBML_RENDER_GRAPHICALPRIMITIVE2D = _libsbml.SBML_RENDER_GRAPHICALPRIMITIVE2D
 render A value in an enumeration defined by the libSBML “render” extension to implement functionality for the SBML Level 3 Render package. More...
 
 SBML_RENDER_GROUP = _libsbml.SBML_RENDER_GROUP
 render A value in an enumeration defined by the libSBML “render” extension to implement functionality for the SBML Level 3 Render package. More...
 
 SBML_RENDER_IMAGE = _libsbml.SBML_RENDER_IMAGE
 render A value in an enumeration defined by the libSBML “render” extension to implement functionality for the SBML Level 3 Render package. More...
 
 SBML_RENDER_LINEARGRADIENT = _libsbml.SBML_RENDER_LINEARGRADIENT
 render A value in an enumeration defined by the libSBML “render” extension to implement functionality for the SBML Level 3 Render package. More...
 
 SBML_RENDER_LINEENDING = _libsbml.SBML_RENDER_LINEENDING
 render A value in an enumeration defined by the libSBML “render” extension to implement functionality for the SBML Level 3 Render package. More...
 
 SBML_RENDER_LINESEGMENT = _libsbml.SBML_RENDER_LINESEGMENT
 render A value in an enumeration defined by the libSBML “render” extension to implement functionality for the SBML Level 3 Render package. More...
 
 SBML_RENDER_LISTOFGLOBALSTYLES = _libsbml.SBML_RENDER_LISTOFGLOBALSTYLES
 render A value in an enumeration defined by the libSBML “render” extension to implement functionality for the SBML Level 3 Render package. More...
 
 SBML_RENDER_LISTOFLOCALSTYLES = _libsbml.SBML_RENDER_LISTOFLOCALSTYLES
 render A value in an enumeration defined by the libSBML “render” extension to implement functionality for the SBML Level 3 Render package. More...
 
 SBML_RENDER_LOCALRENDERINFORMATION = _libsbml.SBML_RENDER_LOCALRENDERINFORMATION
 render A value in an enumeration defined by the libSBML “render” extension to implement functionality for the SBML Level 3 Render package. More...
 
 SBML_RENDER_LOCALSTYLE = _libsbml.SBML_RENDER_LOCALSTYLE
 render A value in an enumeration defined by the libSBML “render” extension to implement functionality for the SBML Level 3 Render package. More...
 
 SBML_RENDER_POINT = _libsbml.SBML_RENDER_POINT
 render A value in an enumeration defined by the libSBML “render” extension to implement functionality for the SBML Level 3 Render package. More...
 
 SBML_RENDER_POLYGON = _libsbml.SBML_RENDER_POLYGON
 render A value in an enumeration defined by the libSBML “render” extension to implement functionality for the SBML Level 3 Render package. More...
 
 SBML_RENDER_RADIALGRADIENT = _libsbml.SBML_RENDER_RADIALGRADIENT
 render A value in an enumeration defined by the libSBML “render” extension to implement functionality for the SBML Level 3 Render package. More...
 
 SBML_RENDER_RECTANGLE = _libsbml.SBML_RENDER_RECTANGLE
 render A value in an enumeration defined by the libSBML “render” extension to implement functionality for the SBML Level 3 Render package. More...
 
 SBML_RENDER_RELABSVECTOR = _libsbml.SBML_RENDER_RELABSVECTOR
 render A value in an enumeration defined by the libSBML “render” extension to implement functionality for the SBML Level 3 Render package. More...
 
 SBML_RENDER_RENDERINFORMATION_BASE = _libsbml.SBML_RENDER_RENDERINFORMATION_BASE
 render A value in an enumeration defined by the libSBML “render” extension to implement functionality for the SBML Level 3 Render package. More...
 
 SBML_RENDER_STYLE_BASE = _libsbml.SBML_RENDER_STYLE_BASE
 render A value in an enumeration defined by the libSBML “render” extension to implement functionality for the SBML Level 3 Render package. More...
 
 SBML_RENDER_TEXT = _libsbml.SBML_RENDER_TEXT
 render A value in an enumeration defined by the libSBML “render” extension to implement functionality for the SBML Level 3 Render package. More...
 
 SBML_RENDER_TRANSFORMATION = _libsbml.SBML_RENDER_TRANSFORMATION
 render A value in an enumeration defined by the libSBML “render” extension to implement functionality for the SBML Level 3 Render package. More...
 
 SBML_RENDER_TRANSFORMATION2D = _libsbml.SBML_RENDER_TRANSFORMATION2D
 render A value in an enumeration defined by the libSBML “render” extension to implement functionality for the SBML Level 3 Render package. More...
 
 SBML_RULE = _libsbml.SBML_RULE
 One of the possible SBML component type codes. More...
 
 SBML_SPECIES = _libsbml.SBML_SPECIES
 One of the possible SBML component type codes. More...
 
 SBML_SPECIES_CONCENTRATION_RULE = _libsbml.SBML_SPECIES_CONCENTRATION_RULE
 One of the possible SBML component type codes. More...
 
 SBML_SPECIES_REFERENCE = _libsbml.SBML_SPECIES_REFERENCE
 One of the possible SBML component type codes. More...
 
 SBML_SPECIES_TYPE = _libsbml.SBML_SPECIES_TYPE
 One of the possible SBML component type codes. More...
 
 SBML_STOICHIOMETRY_MATH = _libsbml.SBML_STOICHIOMETRY_MATH
 One of the possible SBML component type codes. More...
 
 SBML_TRIGGER = _libsbml.SBML_TRIGGER
 One of the possible SBML component type codes. More...
 
 SBML_UNIT = _libsbml.SBML_UNIT
 One of the possible SBML component type codes. More...
 
 SBML_UNIT_DEFINITION = _libsbml.SBML_UNIT_DEFINITION
 One of the possible SBML component type codes. More...
 
 SBML_UNKNOWN = _libsbml.SBML_UNKNOWN
 One of the possible SBML component type codes. More...
 
 SBMLCodesUpperBound = _libsbml.SBMLCodesUpperBound
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 SBMLNamespaceInAnnotation = _libsbml.SBMLNamespaceInAnnotation
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 SBOTermNotUniversalInL2v2 = _libsbml.SBOTermNotUniversalInL2v2
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 SBOTermNotValidAttributeBeforeL2V2 = _libsbml.SBOTermNotValidAttributeBeforeL2V2
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 SBOTermNotValidAttributeBeforeL2V3 = _libsbml.SBOTermNotValidAttributeBeforeL2V3
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 SpatialSizeUnitsNotValidAttribute = _libsbml.SpatialSizeUnitsNotValidAttribute
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 SpatialSizeUnitsRemoved = _libsbml.SpatialSizeUnitsRemoved
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 SpatialUnitsInOneD = _libsbml.SpatialUnitsInOneD
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 SpatialUnitsInThreeD = _libsbml.SpatialUnitsInThreeD
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 SpatialUnitsInTwoD = _libsbml.SpatialUnitsInTwoD
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 SPECIES_ROLE_ACTIVATOR = _libsbml.SPECIES_ROLE_ACTIVATOR
 layout One of the possible roles of a SpeciesReferenceGlyph. More...
 
 SPECIES_ROLE_INHIBITOR = _libsbml.SPECIES_ROLE_INHIBITOR
 layout One of the possible roles of a SpeciesReferenceGlyph. More...
 
 SPECIES_ROLE_INVALID = _libsbml.SPECIES_ROLE_INVALID
 layout One of the possible roles of a SpeciesReferenceGlyph. More...
 
 SPECIES_ROLE_MODIFIER = _libsbml.SPECIES_ROLE_MODIFIER
 layout One of the possible roles of a SpeciesReferenceGlyph. More...
 
 SPECIES_ROLE_PRODUCT = _libsbml.SPECIES_ROLE_PRODUCT
 layout One of the possible roles of a SpeciesReferenceGlyph. More...
 
 SPECIES_ROLE_SIDEPRODUCT = _libsbml.SPECIES_ROLE_SIDEPRODUCT
 layout One of the possible roles of a SpeciesReferenceGlyph. More...
 
 SPECIES_ROLE_SIDESUBSTRATE = _libsbml.SPECIES_ROLE_SIDESUBSTRATE
 layout One of the possible roles of a SpeciesReferenceGlyph. More...
 
 SPECIES_ROLE_SUBSTRATE = _libsbml.SPECIES_ROLE_SUBSTRATE
 layout One of the possible roles of a SpeciesReferenceGlyph. More...
 
 SPECIES_ROLE_UNDEFINED = _libsbml.SPECIES_ROLE_UNDEFINED
 long More...
 
 SpeciesCompartmentRequiredInL1 = _libsbml.SpeciesCompartmentRequiredInL1
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 SpeciesInvalidExtentUnits = _libsbml.SpeciesInvalidExtentUnits
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 SpeciesRefIdInMathMLNotSupported = _libsbml.SpeciesRefIdInMathMLNotSupported
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 SpeciesShouldHaveValue = _libsbml.SpeciesShouldHaveValue
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 SpeciesTypeNotValidAttribute = _libsbml.SpeciesTypeNotValidAttribute
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 SpeciesTypeNotValidComponent = _libsbml.SpeciesTypeNotValidComponent
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 StoichiometryMathMissingMath = _libsbml.StoichiometryMathMissingMath
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 StoichiometryMathNotValidComponent = _libsbml.StoichiometryMathNotValidComponent
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 StoichiometryMathNotYetSupported = _libsbml.StoichiometryMathNotYetSupported
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 StrictSBORequiredInL2v2 = _libsbml.StrictSBORequiredInL2v2
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 StrictSBORequiredInL2v3 = _libsbml.StrictSBORequiredInL2v3
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 StrictUnitsRequiredInL1 = _libsbml.StrictUnitsRequiredInL1
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 StrictUnitsRequiredInL2v1 = _libsbml.StrictUnitsRequiredInL2v1
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 StrictUnitsRequiredInL2v2 = _libsbml.StrictUnitsRequiredInL2v2
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 StrictUnitsRequiredInL2v3 = _libsbml.StrictUnitsRequiredInL2v3
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 SubstanceUnitsOnSpecies = _libsbml.SubstanceUnitsOnSpecies
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 SubsUnitsAllowedInKL = _libsbml.SubsUnitsAllowedInKL
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 SubsUnitsNoLongerValid = _libsbml.SubsUnitsNoLongerValid
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 ThreeDimensionalCompartmentUnits = _libsbml.ThreeDimensionalCompartmentUnits
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 TimeUnitsAllowedInKL = _libsbml.TimeUnitsAllowedInKL
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 TimeUnitsEvent = _libsbml.TimeUnitsEvent
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 TimeUnitsNoLongerValid = _libsbml.TimeUnitsNoLongerValid
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 TimeUnitsRemoved = _libsbml.TimeUnitsRemoved
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 TriggerMathNotBoolean = _libsbml.TriggerMathNotBoolean
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 TwoDimensionalCompartmentUnits = _libsbml.TwoDimensionalCompartmentUnits
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 UnclosedXMLToken = _libsbml.UnclosedXMLToken
 A value in the enumeration of all the error and warning codes returned by the XML layer in libSBML. More...
 
 UndeclaredExtentUnitsL3 = _libsbml.UndeclaredExtentUnitsL3
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 UndeclaredObjectUnitsL3 = _libsbml.UndeclaredObjectUnitsL3
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 UndeclaredSpeciesInStoichMath = _libsbml.UndeclaredSpeciesInStoichMath
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 UndeclaredSpeciesRef = _libsbml.UndeclaredSpeciesRef
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 UndeclaredTimeUnitsL3 = _libsbml.UndeclaredTimeUnitsL3
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 UndeclaredUnits = _libsbml.UndeclaredUnits
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 UndefinedOutsideCompartment = _libsbml.UndefinedOutsideCompartment
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 UndefinedXMLEntity = _libsbml.UndefinedXMLEntity
 A value in the enumeration of all the error and warning codes returned by the XML layer in libSBML. More...
 
 UninterpretableXMLContent = _libsbml.UninterpretableXMLContent
 A value in the enumeration of all the error and warning codes returned by the XML layer in libSBML. More...
 
 UNIT_KIND_AMPERE = _libsbml.UNIT_KIND_AMPERE
 One of the possible predefined SBML units. More...
 
 UNIT_KIND_AVOGADRO = _libsbml.UNIT_KIND_AVOGADRO
 One of the possible predefined SBML units. More...
 
 UNIT_KIND_BECQUEREL = _libsbml.UNIT_KIND_BECQUEREL
 One of the possible predefined SBML units. More...
 
 UNIT_KIND_CANDELA = _libsbml.UNIT_KIND_CANDELA
 One of the possible predefined SBML units. More...
 
 UNIT_KIND_CELSIUS = _libsbml.UNIT_KIND_CELSIUS
 One of the possible predefined SBML units. More...
 
 UNIT_KIND_COULOMB = _libsbml.UNIT_KIND_COULOMB
 One of the possible predefined SBML units. More...
 
 UNIT_KIND_DIMENSIONLESS = _libsbml.UNIT_KIND_DIMENSIONLESS
 One of the possible predefined SBML units. More...
 
 UNIT_KIND_FARAD = _libsbml.UNIT_KIND_FARAD
 One of the possible predefined SBML units. More...
 
 UNIT_KIND_GRAM = _libsbml.UNIT_KIND_GRAM
 One of the possible predefined SBML units. More...
 
 UNIT_KIND_GRAY = _libsbml.UNIT_KIND_GRAY
 One of the possible predefined SBML units. More...
 
 UNIT_KIND_HENRY = _libsbml.UNIT_KIND_HENRY
 One of the possible predefined SBML units. More...
 
 UNIT_KIND_HERTZ = _libsbml.UNIT_KIND_HERTZ
 One of the possible predefined SBML units. More...
 
 UNIT_KIND_INVALID = _libsbml.UNIT_KIND_INVALID
 One of the possible predefined SBML units. More...
 
 UNIT_KIND_ITEM = _libsbml.UNIT_KIND_ITEM
 One of the possible predefined SBML units. More...
 
 UNIT_KIND_JOULE = _libsbml.UNIT_KIND_JOULE
 One of the possible predefined SBML units. More...
 
 UNIT_KIND_KATAL = _libsbml.UNIT_KIND_KATAL
 One of the possible predefined SBML units. More...
 
 UNIT_KIND_KELVIN = _libsbml.UNIT_KIND_KELVIN
 One of the possible predefined SBML units. More...
 
 UNIT_KIND_KILOGRAM = _libsbml.UNIT_KIND_KILOGRAM
 One of the possible predefined SBML units. More...
 
 UNIT_KIND_LITER = _libsbml.UNIT_KIND_LITER
 One of the possible predefined SBML units. More...
 
 UNIT_KIND_LITRE = _libsbml.UNIT_KIND_LITRE
 One of the possible predefined SBML units. More...
 
 UNIT_KIND_LUMEN = _libsbml.UNIT_KIND_LUMEN
 One of the possible predefined SBML units. More...
 
 UNIT_KIND_LUX = _libsbml.UNIT_KIND_LUX
 One of the possible predefined SBML units. More...
 
 UNIT_KIND_METER = _libsbml.UNIT_KIND_METER
 One of the possible predefined SBML units. More...
 
 UNIT_KIND_METRE = _libsbml.UNIT_KIND_METRE
 One of the possible predefined SBML units. More...
 
 UNIT_KIND_MOLE = _libsbml.UNIT_KIND_MOLE
 One of the possible predefined SBML units. More...
 
 UNIT_KIND_NEWTON = _libsbml.UNIT_KIND_NEWTON
 One of the possible predefined SBML units. More...
 
 UNIT_KIND_OHM = _libsbml.UNIT_KIND_OHM
 One of the possible predefined SBML units. More...
 
 UNIT_KIND_PASCAL = _libsbml.UNIT_KIND_PASCAL
 One of the possible predefined SBML units. More...
 
 UNIT_KIND_RADIAN = _libsbml.UNIT_KIND_RADIAN
 One of the possible predefined SBML units. More...
 
 UNIT_KIND_SECOND = _libsbml.UNIT_KIND_SECOND
 One of the possible predefined SBML units. More...
 
 UNIT_KIND_SIEMENS = _libsbml.UNIT_KIND_SIEMENS
 One of the possible predefined SBML units. More...
 
 UNIT_KIND_SIEVERT = _libsbml.UNIT_KIND_SIEVERT
 One of the possible predefined SBML units. More...
 
 UNIT_KIND_STERADIAN = _libsbml.UNIT_KIND_STERADIAN
 One of the possible predefined SBML units. More...
 
 UNIT_KIND_TESLA = _libsbml.UNIT_KIND_TESLA
 One of the possible predefined SBML units. More...
 
 UNIT_KIND_VOLT = _libsbml.UNIT_KIND_VOLT
 One of the possible predefined SBML units. More...
 
 UNIT_KIND_WATT = _libsbml.UNIT_KIND_WATT
 One of the possible predefined SBML units. More...
 
 UNIT_KIND_WEBER = _libsbml.UNIT_KIND_WEBER
 One of the possible predefined SBML units. More...
 
 UnitsNotValidAttribute = _libsbml.UnitsNotValidAttribute
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 UNKNOWN_ASSOCIATION = _libsbml.UNKNOWN_ASSOCIATION
 fbc One of the possible Association types. More...
 
 UNKNOWN_QUALIFIER = _libsbml.UNKNOWN_QUALIFIER
 One of the possible MIRIAM annotation types used by CVTerm. More...
 
 UnknownCoreAttribute = _libsbml.UnknownCoreAttribute
 Encountered an unknow attribute in the core SBML Level 3 namespace. More...
 
 UnknownError = _libsbml.UnknownError
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 UnknownPackageAttribute = _libsbml.UnknownPackageAttribute
 Encountered an unknown attribute in an SBML Level 3 package namespace. More...
 
 UnrecognisedSBOTerm = _libsbml.UnrecognisedSBOTerm
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 UnrecognizedElement = _libsbml.UnrecognizedElement
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 UnrecognizedXMLElement = _libsbml.UnrecognizedXMLElement
 A value in the enumeration of all the error and warning codes returned by the XML layer in libSBML. More...
 
 UnrecognizedXMLParserCode = _libsbml.UnrecognizedXMLParserCode
 A value in the enumeration of all the error and warning codes returned by the XML layer in libSBML. More...
 
 UnrequiredPackagePresent = _libsbml.UnrequiredPackagePresent
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 UpperUnitBound = _libsbml.UpperUnitBound
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 V_TEXTANCHOR_BASELINE = _libsbml.V_TEXTANCHOR_BASELINE
 render A value in an enumeration defined by the libSBML “render” extension to implement functionality for the SBML Level 3 Render package. More...
 
 V_TEXTANCHOR_BOTTOM = _libsbml.V_TEXTANCHOR_BOTTOM
 render A value in an enumeration defined by the libSBML “render” extension to implement functionality for the SBML Level 3 Render package. More...
 
 V_TEXTANCHOR_INVALID = _libsbml.V_TEXTANCHOR_INVALID
 render A value in an enumeration defined by the libSBML “render” extension to implement functionality for the SBML Level 3 Render package. More...
 
 V_TEXTANCHOR_MIDDLE = _libsbml.V_TEXTANCHOR_MIDDLE
 render A value in an enumeration defined by the libSBML “render” extension to implement functionality for the SBML Level 3 Render package. More...
 
 V_TEXTANCHOR_TOP = _libsbml.V_TEXTANCHOR_TOP
 render A value in an enumeration defined by the libSBML “render” extension to implement functionality for the SBML Level 3 Render package. More...
 
 V_TEXTANCHOR_UNSET = _libsbml.V_TEXTANCHOR_UNSET
 render A value in an enumeration defined by the libSBML “render” extension to implement functionality for the SBML Level 3 Render package. More...
 
 ValuesFromTriggerTimeNeedDelay = _libsbml.ValuesFromTriggerTimeNeedDelay
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 VariableNotValidAttribute = _libsbml.VariableNotValidAttribute
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 VersionPositiveInteger = _libsbml.VersionPositiveInteger
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 VolumeLitreDefExponentNotOne = _libsbml.VolumeLitreDefExponentNotOne
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 VolumeMetreDefExponentNot3 = _libsbml.VolumeMetreDefExponentNot3
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 XMLAttributeTypeMismatch = _libsbml.XMLAttributeTypeMismatch
 A value in the enumeration of all the error and warning codes returned by the XML layer in libSBML. More...
 
 XMLBadColon = _libsbml.XMLBadColon
 A value in the enumeration of all the error and warning codes returned by the XML layer in libSBML. More...
 
 XMLBadNumber = _libsbml.XMLBadNumber
 A value in the enumeration of all the error and warning codes returned by the XML layer in libSBML. More...
 
 XMLBadUTF8Content = _libsbml.XMLBadUTF8Content
 A value in the enumeration of all the error and warning codes returned by the XML layer in libSBML. More...
 
 XMLContentEmpty = _libsbml.XMLContentEmpty
 A value in the enumeration of all the error and warning codes returned by the XML layer in libSBML. More...
 
 XMLEmptyValueNotPermitted = _libsbml.XMLEmptyValueNotPermitted
 A value in the enumeration of all the error and warning codes returned by the XML layer in libSBML. More...
 
 XMLErrorCodesUpperBound = _libsbml.XMLErrorCodesUpperBound
 A value in the enumeration of all the error and warning codes returned by the XML layer in libSBML. More...
 
 XMLExpectedQuotedString = _libsbml.XMLExpectedQuotedString
 A value in the enumeration of all the error and warning codes returned by the XML layer in libSBML. More...
 
 XMLFileOperationError = _libsbml.XMLFileOperationError
 A value in the enumeration of all the error and warning codes returned by the XML layer in libSBML. More...
 
 XMLFileUnreadable = _libsbml.XMLFileUnreadable
 A value in the enumeration of all the error and warning codes returned by the XML layer in libSBML. More...
 
 XMLFileUnwritable = _libsbml.XMLFileUnwritable
 A value in the enumeration of all the error and warning codes returned by the XML layer in libSBML. More...
 
 XMLNetworkAccessError = _libsbml.XMLNetworkAccessError
 A value in the enumeration of all the error and warning codes returned by the XML layer in libSBML. More...
 
 XMLOutOfMemory = _libsbml.XMLOutOfMemory
 A value in the enumeration of all the error and warning codes returned by the XML layer in libSBML. More...
 
 XMLTagMismatch = _libsbml.XMLTagMismatch
 A value in the enumeration of all the error and warning codes returned by the XML layer in libSBML. More...
 
 XMLTranscoderError = _libsbml.XMLTranscoderError
 A value in the enumeration of all the error and warning codes returned by the XML layer in libSBML. More...
 
 XMLUnexpectedEOF = _libsbml.XMLUnexpectedEOF
 A value in the enumeration of all the error and warning codes returned by the XML layer in libSBML. More...
 
 XMLUnknownError = _libsbml.XMLUnknownError
 A value in the enumeration of all the error and warning codes returned by the XML layer in libSBML. More...
 
 ZeroDCompartmentContainment = _libsbml.ZeroDCompartmentContainment
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 ZeroDimensionalCompartmentConst = _libsbml.ZeroDimensionalCompartmentConst
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 ZeroDimensionalCompartmentSize = _libsbml.ZeroDimensionalCompartmentSize
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 
 ZeroDimensionalCompartmentUnits = _libsbml.ZeroDimensionalCompartmentUnits
 A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError. More...
 

Function Documentation

def libsbml.Association_parseInfixAssociation (   association)

Parses a gene association in infix format and returns a corresponding Association object.

Association_parseInfixAssociation(string association)   Association

This parses a string that has a list of gene names and conjunctions or disjunctions. For example:

(b2422) and (b2425) and (b2423) and (b2424) or (b2422) and (b2423) and (b2424) and (b2413) and (b3917)
Parameters
associationthe string to parse.
Returns
the parsed association, or None in case of an error.
Note
Because this is a static method on a class, the Python language interface for libSBML will contain two variants. One will be the expected, normal static method on the class (i.e., a regular methodName), and the other will be a standalone top-level function with the name ClassName_methodName(). This is merely an artifact of how the language interfaces are created in libSBML. The methods are functionally identical.
See also
toInfix()
def libsbml.BindingStatus_fromString (   s)
BindingStatus_fromString(long  s)   long
 
def libsbml.BindingStatus_toString (   bindingStatus)
BindingStatus_toString(long bindingStatus)   string  *
 
def libsbml.BiolQualifierType_fromString (   s)

This method takes a string and returns a biol qualifier representing the string.

BiolQualifierType_fromString(long  s)   long

This method takes a string as argument and returns a biol qualifier type corresponding to that string. For example, passing it the string 'hasVersion' will return the qualifier BQB_HAS_VERSION.

Parameters
sthe string to translate to a libSBML constant value representing a biological qualifier.
Returns
a libSBML qualifier enumeration value for the given human readable qualifier name.
def libsbml.BiolQualifierType_toString (   type)

This method takes a biol qualifier type code and returns a string representing the code.

BiolQualifierType_toString(long type)   string  *

This method takes a biol qualifier type as argument and returns a string name corresponding to that code. For example, passing it the qualifier BQB_HAS_VERSION will return the string 'hasVersion'.

Parameters
typethe value to translate. The value should be a constant whose name begins with BQB_, such as (for example) BQB_IS.
Returns
a human readable qualifier name for the given type.
Note
The caller does not own the returned string and is therefore not allowed to modify it.
def libsbml.CompBase_getParentModel (   child)

Returns the Model object to which the referenced child object belongs.

CompBase_getParentModel(SBase child)   Model
 
def libsbml.CompExtension_getDefaultLevel ( )

Returns the default SBML Level used by this libSBML package extension.

CompExtension_getDefaultLevel()   long
Returns
the SBML Level.
Note
Because this is a static method on a class, the Python language interface for libSBML will contain two variants. One will be the expected, normal static method on the class (i.e., a regular methodName), and the other will be a standalone top-level function with the name ClassName_methodName(). This is merely an artifact of how the language interfaces are created in libSBML. The methods are functionally identical.
def libsbml.CompExtension_getDefaultPackageVersion ( )

Returns the default version of the SBML Level 3 package implemented by this libSBML extension.

CompExtension_getDefaultPackageVersion()   long
Returns
the default version number of the SBML Level 3 package definition.
Note
Because this is a static method on a class, the Python language interface for libSBML will contain two variants. One will be the expected, normal static method on the class (i.e., a regular methodName), and the other will be a standalone top-level function with the name ClassName_methodName(). This is merely an artifact of how the language interfaces are created in libSBML. The methods are functionally identical.
def libsbml.CompExtension_getDefaultVersion ( )

Returns the default SBML Version used by this libSBML package extension.

CompExtension_getDefaultVersion()   long
Returns
the Version within the default SBML Level.
Note
Because this is a static method on a class, the Python language interface for libSBML will contain two variants. One will be the expected, normal static method on the class (i.e., a regular methodName), and the other will be a standalone top-level function with the name ClassName_methodName(). This is merely an artifact of how the language interfaces are created in libSBML. The methods are functionally identical.
def libsbml.CompExtension_getPackageName ( )

Returns the nickname of the SBML Level 3 package implemented by this libSBML extension.

CompExtension_getPackageName()   string
Returns
the package nickname, as a string.
Note
Because this is a static method on a class, the Python language interface for libSBML will contain two variants. One will be the expected, normal static method on the class (i.e., a regular methodName), and the other will be a standalone top-level function with the name ClassName_methodName(). This is merely an artifact of how the language interfaces are created in libSBML. The methods are functionally identical.
def libsbml.CompExtension_getXmlnsL3V1V1 ( )

Returns the XML namespace URI of the SBML Level 3 package implemented by this libSBML extension.

CompExtension_getXmlnsL3V1V1()   string
Returns
the XML namespace as a string.
Note
Because this is a static method on a class, the Python language interface for libSBML will contain two variants. One will be the expected, normal static method on the class (i.e., a regular methodName), and the other will be a standalone top-level function with the name ClassName_methodName(). This is merely an artifact of how the language interfaces are created in libSBML. The methods are functionally identical.
def libsbml.DefinitionURLRegistry_addDefinitionURL (   url,
  type 
)

Adds the given DefinitionURL to the registry of SBML DefinitionURLs.

DefinitionURLRegistry_addDefinitionURL(string url, int type)   int
Parameters
urlthe DefinitionURL to add to the registry.
typethe AST node type
Returns
integer value indicating success/failure of the function. The possible values returned by this function are:
def libsbml.DefinitionURLRegistry_addSBMLDefinitions ( )
DefinitionURLRegistry_addSBMLDefinitions()
 
def libsbml.DefinitionURLRegistry_clearDefinitions ( )
DefinitionURLRegistry_clearDefinitions()
 
def libsbml.DefinitionURLRegistry_getCoreDefinitionsAdded ( )
DefinitionURLRegistry_getCoreDefinitionsAdded()   bool
 
def libsbml.DefinitionURLRegistry_getDefinitionUrlByIndex (   index)
DefinitionURLRegistry_getDefinitionUrlByIndex(int index)   string
 
def libsbml.DefinitionURLRegistry_getInstance ( )

Returns the singleton instance for the DefinitionURL registry.

DefinitionURLRegistry_getInstance()   DefinitionURLRegistry

Prior to using the registry, callers have to obtain a copy of the registry. This static method provides the means for doing that.

Returns
the singleton for the DefinitionURL registry.
def libsbml.DefinitionURLRegistry_getNumDefinitionURLs ( )

Returns the number of DefinitionURLs known by the registry.

DefinitionURLRegistry_getNumDefinitionURLs()   int
Returns
the number of registered DefinitionURLs.
See also
getDefinitionURLByIndex()
def libsbml.DefinitionURLRegistry_getType (   url)
DefinitionURLRegistry_getType(string url)   int
 
def libsbml.deleteLayoutAnnotation (   pAnnotation)

Takes an XMLNode and tries to find the layout annotation node and deletes it if it was found.

deleteLayoutAnnotation(XMLNode pAnnotation)   XMLNode
 
def libsbml.deleteLayoutIdAnnotation (   pAnnotation)

Takes an XMLNode and tries to find the layoutId annotation node and deletes it if it was found.

deleteLayoutIdAnnotation(XMLNode pAnnotation)   XMLNode
 
def libsbml.endl (   args)

Insert a newline character into the given C++ stream s.

endl(ostream s)   ostream

This is a wrapper around the underlying C++ OStream method endl. It inserts a newline into the stream passed as argument. Additionally, it flushes buffered streams.

Parameters
sthe stream to which the newline should be written.
Returns
the stream s.
def libsbml.FbcAssociation_parseFbcInfixAssociation (   association,
  plugin,
  usingId = False,
  addMissingGP = True 
)

Parses a gene association in infix format and returns a corresponding Association object.

parseFbcInfixAssociation(string association, FbcModelPlugin plugin, bool usingId, bool addMissingGP)   FbcAssociation
parseFbcInfixAssociation(string association, FbcModelPlugin plugin, bool usingId)   FbcAssociation
FbcAssociation_parseFbcInfixAssociation(string association, FbcModelPlugin plugin)   FbcAssociation

This parses a string that has a list of gene names and conjunctions or disjunctions. For example:

  (b2422) and (b2425) and (b2423) and (b2424) or (b2422) and (b2423) and (b2424) and (b2413) and (b3917)

The 'and' operator takes precedence over the 'or' operator, meaning that the above input string would turn into two groups of gene names: either 'b2422, b2425, b2423, and b2424' or 'b2422, b2423, b2424, b2413, and b3917'. Parentheses may be added to make things more clear, and to encode alternative schemes.

This method also creates missing GeneProduct objects, in case the unique reference does not yet exist.

Parameters
associationthe string to parse.
pluginthe FbcModelPlugin on which to add the geneProduct elements.
usingIdboolean indicating whether the infix assumes identifiers (True) or labels (False default).
addMissingGPboolean indicating whether to add missing geneProducts (True default) or not (False).
Returns
the parsed association, or None in case of an error.
Note
Because this is a static method on a class, the Python language interface for libSBML will contain two variants. One will be the expected, normal static method on the class (i.e., a regular methodName), and the other will be a standalone top-level function with the name ClassName_methodName(). This is merely an artifact of how the language interfaces are created in libSBML. The methods are functionally identical.
def libsbml.FbcExtension_getDefaultLevel ( )

Returns the default SBML Level used by this libSBML package extension.

FbcExtension_getDefaultLevel()   long
Returns
the SBML Level.
Note
Because this is a static method on a class, the Python language interface for libSBML will contain two variants. One will be the expected, normal static method on the class (i.e., a regular methodName), and the other will be a standalone top-level function with the name ClassName_methodName(). This is merely an artifact of how the language interfaces are created in libSBML. The methods are functionally identical.
def libsbml.FbcExtension_getDefaultPackageVersion ( )

Returns the default version of the SBML Level 3 package implemented by this libSBML extension.

FbcExtension_getDefaultPackageVersion()   long
Returns
the default version number of the SBML Level 3 package definition.
Note
Because this is a static method on a class, the Python language interface for libSBML will contain two variants. One will be the expected, normal static method on the class (i.e., a regular methodName), and the other will be a standalone top-level function with the name ClassName_methodName(). This is merely an artifact of how the language interfaces are created in libSBML. The methods are functionally identical.
def libsbml.FbcExtension_getDefaultVersion ( )

Returns the default SBML Version used by this libSBML package extension.

FbcExtension_getDefaultVersion()   long
Returns
the Version within the default SBML Level.
Note
Because this is a static method on a class, the Python language interface for libSBML will contain two variants. One will be the expected, normal static method on the class (i.e., a regular methodName), and the other will be a standalone top-level function with the name ClassName_methodName(). This is merely an artifact of how the language interfaces are created in libSBML. The methods are functionally identical.
def libsbml.FbcExtension_getPackageName ( )

Returns the nickname of the SBML Level 3 package implemented by this libSBML extension.

FbcExtension_getPackageName()   string
Returns
the package nickname, as a string.
Note
Because this is a static method on a class, the Python language interface for libSBML will contain two variants. One will be the expected, normal static method on the class (i.e., a regular methodName), and the other will be a standalone top-level function with the name ClassName_methodName(). This is merely an artifact of how the language interfaces are created in libSBML. The methods are functionally identical.
def libsbml.FbcExtension_getXmlnsL3V1V1 ( )

Returns the XML namespace URI of the SBML Level 3 package implemented by this libSBML extension.

FbcExtension_getXmlnsL3V1V1()   string
Returns
the XML namespace as a string.
Note
Because this is a static method on a class, the Python language interface for libSBML will contain two variants. One will be the expected, normal static method on the class (i.e., a regular methodName), and the other will be a standalone top-level function with the name ClassName_methodName(). This is merely an artifact of how the language interfaces are created in libSBML. The methods are functionally identical.
def libsbml.FbcExtension_getXmlnsL3V1V2 ( )

Returns the XML namespace URI of the SBML Level 3 package implemented by this libSBML extension.

FbcExtension_getXmlnsL3V1V2()   string
Returns
the XML namespace as a string.
Note
Because this is a static method on a class, the Python language interface for libSBML will contain two variants. One will be the expected, normal static method on the class (i.e., a regular methodName), and the other will be a standalone top-level function with the name ClassName_methodName(). This is merely an artifact of how the language interfaces are created in libSBML. The methods are functionally identical.
def libsbml.float_array_frompointer (   t)
double_array_frompointer (float * t)   float_array
def libsbml.flush (   args)

Flush the given C++ stream s.

flush(ostream s)   ostream

This is a wrapper around the underlying C++ OStream method flush. It flush any pending output in the stream passed as argument.

Parameters
sthe stream to be flushed.
Returns
the stream s.
def libsbml.formulaToL3String (   tree)

Converts an AST to a string representation of a formula using a syntax derived from SBML Level 1, but extended to include elements from SBML Level 2 and SBML Level 3.

formulaToL3String(ASTNode tree)   string
The text-string form of mathematical formulas read by the function parseL3Formula() and written by the function formulaToL3String() uses an expanded version of the syntax read and written by parseFormula() and formulaToString(), respectively. The latter two libSBML functions were originally developed to support conversion between SBML Levels 1 and 2, and were focused on the syntax of mathematical formulas used in SBML Level 1. With time, and the use of MathML in SBML Levels 2 and 3, it became clear that supporting Level 2 and 3's expanded mathematical syntax would be useful for software developers. To maintain backwards compatibility for libSBML users, the original formulaToString() and parseFormula() have been left untouched, and instead, the new functionality is provided in the form of parseL3Formula() and formulaToL3String().

The following lists the main differences in the formula syntax supported by the Level 3 ('L3') versions of the formula parsers and formatters, compared to what is supported by the Level 1-oriented parseFormula() and formulaToString():

  • Units may be asociated with bare numbers, using the following syntax:
    number unit
    The number may be in any form (an integer, real, or rational number), and the unit must conform to the syntax of an SBML identifier (technically, the type defined as SId in the SBML specifications). The whitespace between number and unit is optional.
  • The Boolean function symbols && (and), || (or), ! (not), and != (not equals) may be used.
  • The modulo operation is allowed as the symbol % and will produce a <piecewise> function in the corresponding MathML output by default, or can produce the MathML function rem, depending on the L3ParserSettings object (see L3ParserSettings_setParseModuloL3v2() ).
  • All inverse trigonometric functions may be defined in the infix either using arc as a prefix or simply a; in other words, both arccsc and acsc are interpreted as the operator arccosecant as defined in MathML 2.0. (Many functions in the simpler SBML Level 1 oriented parser implemented by parseFormula() are defined this way as well, but not all.)
  • The following expression is parsed as a rational number instead of as a numerical division:
    (integer/integer)
    Spaces are not allowed in this construct; in other words, "(3 / 4)" (with whitespace between the numbers and the operator) will be parsed into the MathML <divide> construct rather than a rational number. You can, however, assign units to a rational number as a whole; here is an example: "(3/4) ml". (In the case of division rather than a rational number, units are not interpreted in this way.)
  • Various parser and formatter behaviors may be altered through the use of a L3ParserSettings object in conjunction with the functions parseL3FormulaWithSettings() and formulaToL3StringWithSettings() The settings available include the following:
    • The function log with a single argument ("log(x)") can be parsed as log10(x), ln(x), or treated as an error, as desired.

    • Unary minus signs can be collapsed or preserved; that is, sequential pairs of unary minuses (e.g., "- -3") can be removed from the input entirely and single unary minuses can be incorporated into the number node, or all minuses can be preserved in the AST node structure.

    • Parsing of units embedded in the input string can be turned on and off.

    • The string avogadro can be parsed as a MathML csymbol or as an identifier.

    • The string % can be parsed either as a piecewise function or as the 'rem' function: a % b will either become

      piecewise(a - b*ceil(a/b), xor((a < 0), (b < 0)), a - b*floor(a/b))

      or

      rem(a, b).

      The latter is simpler, but the rem MathML is only allowed as of SBML Level 3 Version 2.

    • A Model object may optionally be provided to the parser using the variant function call parseL3FormulaWithModel() or stored in a L3ParserSettings object passed to the variant function parseL3FormulaWithSettings(). When a Model object is provided, identifiers (values of type SId ) from that model are used in preference to pre-defined MathML definitions for both symbols and functions. More precisely:

      • In the case of symbols: the Model entities whose identifiers will shadow identical symbols in the mathematical formula are: Species, Compartment, Parameter, Reaction, and SpeciesReference. For instance, if the parser is given a Model containing a Species with the identifier "pi", and the formula to be parsed is "3*pi", the MathML produced will contain the construct <ci> pi </ci> instead of the construct <pi/>.

      • In the case of user-defined functions: when a Model object is provided, SId values of user-defined functions present in the model will be used preferentially over pre-defined MathML functions. For example, if the passed-in Model contains a FunctionDefinition object with the identifier "sin", that function will be used instead of the predefined MathML function <sin/>.

    • An SBMLNamespaces object may optionally be provided to identify SBML Level 3 packages that extend the syntax understood by the formula parser. When the namespaces are provided, the parser will interpret possible additional syntax defined by the libSBML plug-ins implementing the SBML Level 3 packages; for example, it may understand vector/array extensions introduced by the SBML Level 3 Arrays package.

These configuration settings cannot be changed directly using the basic parser and formatter functions, but can be changed on a per-call basis by using the alternative functions parseL3FormulaWithSettings() and formulaToL3StringWithSettings().

Neither SBML nor the MathML standard define a 'string-form' equivalent to MathML expressions. The approach taken by libSBML is to start with the formula syntax defined by SBML Level 1 (which in fact used a custom text-string representation of formulas, and not MathML), and expand it to include the functionality described above. This formula syntax is based mostly on C programming syntax, and may contain operators, function calls, symbols, and white space characters. The following table provides the precedence rules for the different entities that may appear in formula strings.

Token Operation Class Preced. Assoc.
namesymbol referenceoperand8n/a
(expression)expression groupingoperand8n/a
f(...)function callprefix8left
^powerbinary7left
-, !negation, Boolean 'not'unary6right
*, /, %multip., div., modulobinary5left
+, -addition and subtractionbinary4left
==, <, >, <=, >=, !=Boolean comparisonsbinary3left
&&, ||Boolean 'and' and 'or'binary2left
,argument delimiterbinary1left
Expression operators and their precedence in the "Level 3" text-string format for mathematical expressions.

In the table above, operand implies the construct is an operand, prefix implies the operation is applied to the following arguments, unary implies there is one argument, and binary implies there are two arguments. The values in the Precedence column show how the order of different types of operation are determined. For example, the expression a + b * c is evaluated as a + (b * c) because the * operator has higher precedence. The Associates column shows how the order of similar precedence operations is determined; for example, a && b || c is evaluated as (a && b) || c because the && and || operators are left-associative and have the same precedence.

The function call syntax consists of a function name, followed by optional white space, followed by an opening parenthesis token, followed by a sequence of zero or more arguments separated by commas (with each comma optionally preceded and/or followed by zero or more white space characters), followed by a closing parenthesis token. The function name must be chosen from one of the pre-defined functions in SBML or a user-defined function in the model. The following table lists the names of certain common mathematical functions; this table corresponds to Table 6 in the SBML Level 1 Version 2 specification with additions based on the functions added in SBML Level 2 and Level 3:

Name Argument(s) Formula or meaning Argument Constraints Result constraints
abs x Absolute value of x.
acos, arccos x Arccosine of x in radians. –1.0 ≤ x ≤ 1.0 0 ≤ acos(x) ≤ π
acosh, arccosh x Hyperbolic arccosine of x in radians.
acot, arccot x Arccotangent of x in radians.
acoth, arccoth x Hyperbolic arccotangent of x in radians.
acsc, arccsc x Arccosecant of x in radians.
acsch, arccsch x Hyperbolic arccosecant of x in radians.
asec, arcsec x Arcsecant of x in radians.
asech, arcsech x Hyperbolic arcsecant of x in radians.
asin, arcsin xArcsine of x in radians. –1.0 ≤ x ≤ 1.0 0 ≤ asin(x) ≤ π
atan, arctan x Arctangent of x in radians. 0 ≤ atan(x) ≤ π
atanh, arctanh x Hyperbolic arctangent of x in radians.
ceil, ceiling x Smallest number not less than x whose value is an exact integer.
cos x Cosine of x
cosh x Hyperbolic cosine of x.
cot x Cotangent of x.
coth x Hyperbolic cotangent of x.
csc x Cosecant of x.
csch x Hyperbolic cosecant of x.
delay x, y The value of x at y time units in the past.
factorial n The factorial of n. Factorials are defined by n! = n*(n–1)* ... * 1. n must be an integer.
exp x e x, where e is the base of the natural logarithm.
floor x The largest number not greater than x whose value is an exact integer.
ln x Natural logarithm of x. x > 0
log x By default, the base 10 logarithm of x, but can be set to be the natural logarithm of x, or to be an illegal construct. x > 0
log x, y The base x logarithm of y. y > 0
log10 x Base 10 logarithm of x. x > 0
piecewise x1, y1, [x2, y2,] [...] [z] A piecewise function: if (y1), x1. Otherwise, if (y2), x2, etc. Otherwise, z. y1, y2, y3 [etc] must be Boolean
pow, power x, y x y.
root b, x The root base b of x.
sec x Secant of x.
sech x Hyperbolic secant of x.
sqr x x2.
sqrt x x. x > 0 sqrt(x) ≥ 0
sin x Sine of x.
sinh x Hyperbolic sine of x.
tan x Tangent of x. x ≠ n*π/2, for odd integer n
tanh x Hyperbolic tangent of x.
and x, y, z... Boolean and(x, y, z...): returns true if all of its arguments are true. Note that and is an n-ary function, taking 0 or more arguments, and that and() returns true. All arguments must be Boolean
not x Boolean not(x) x must be Boolean
or x, y, z... Boolean or(x, y, z...): returns true if at least one of its arguments is true. Note that or is an n-ary function, taking 0 or more arguments, and that or() returns false. All arguments must be Boolean
xor x, y, z... Boolean xor(x, y, z...): returns true if an odd number of its arguments is true. Note that xor is an n-ary function, taking 0 or more arguments, and that xor() returns false. All arguments must be Boolean
eq x, y, z... Boolean eq(x, y, z...): returns true if all arguments are equal. Note that eq is an n-ary function, but must take 2 or more arguments.
geq x, y, z... Boolean geq(x, y, z...): returns true if each argument is greater than or equal to the argument following it. Note that geq is an n-ary function, but must take 2 or more arguments.
gt x, y, z... Boolean gt(x, y, z...): returns true if each argument is greater than the argument following it. Note that gt is an n-ary function, but must take 2 or more arguments.
leq x, y, z... Boolean leq(x, y, z...): returns true if each argument is less than or equal to the argument following it. Note that leq is an n-ary function, but must take 2 or more arguments.
lt x, y, z... Boolean lt(x, y, z...): returns true if each argument is less than the argument following it. Note that lt is an n-ary function, but must take 2 or more arguments.
neq x, y Boolean x != y: returns true unless x and y are equal.
plus x, y, z... x + y + z + ...: The sum of the arguments of the function. Note that plus is an n-ary function taking 0 or more arguments, and that plus() returns 0.
times x, y, z... x * y * z * ...: The product of the arguments of the function. Note that times is an n-ary function taking 0 or more arguments, and that times() returns 1.
minus x, y xy.
divide x, y x / y.
Mathematical functions defined in the "Level 3" text-string formula syntax.

Parsing of the various MathML functions and constants are all case-insensitive by default: function names such as cos, Cos and COS are all parsed as the MathML cosine operator, <cos>. However, when a Model object is used in conjunction with either parseL3FormulaWithModel() or parseL3FormulaWithSettings(), any identifiers found in that model will be parsed in a case-sensitive way. For example, if a model contains a Species having the identifier Pi, the parser will parse "Pi" in the input as "<ci> Pi </ci>" but will continue to parse the symbols "pi" and "PI" as "<pi>".

As mentioned above, the manner in which the 'L3' versions of the formula parser and formatter interpret the function "log" can be changed. To do so, callers should use the function parseL3FormulaWithSettings() and pass it an appropriate L3ParserSettings object. By default, unlike the SBML Level 1 parser implemented by parseFormula(), the string quot;log" is interpreted as the base 10 logarithm, and not as the natural logarithm. However, you can change the interpretation to be base-10 log, natural log, or as an error; since the name 'log' by itself is ambiguous, you require that the parser uses log10 or ln instead, which are more clear. Please refer to parseL3FormulaWithSettings().

In addition, the following symbols will be translated to their MathML equivalents, if no symbol with the same SId identifier string exists in the Model object provided:

Name Meaning MathML
true Boolean value true <true/>
false Boolean value false <false/>
pi Mathematical constant pi <pi/>
avogadro Value of Avogadro's constant stipulated by SBML <csymbol encoding="text" definitionURL="http://www.sbml.org/sbml/symbols/avogadro"> avogadro </csymbol/>
time Simulation time as defined in SBML <csymbol encoding="text" definitionURL="http://www.sbml.org/sbml/symbols/time"> time </csymbol/>
inf, infinity Mathematical constant "infinity" <infinity/>
nan, notanumber Mathematical concept "not a number" <notanumber/>
Mathematical symbols defined in the "Level 3" text-string formula syntax.

Again, as mentioned above, whether the string quot;avogadro" is parsed as an AST node of type AST_NAME_AVOGADRO or AST_NAME is configurable; use the version of the parser function called parseL3FormulaWithSettings(). This Avogadro-related functionality is provided because SBML Level 2 models may not use AST_NAME_AVOGADRO AST nodes.

Parameters
treethe AST to be converted.
Returns
the formula from the given AST as an SBML Level 3 text-string mathematical formula. The caller owns the returned string and is responsible for freeing it when it is no longer needed.
See also
libsbml.formulaToString()
libsbml.parseL3FormulaWithSettings()
libsbml.parseL3Formula()
libsbml.parseL3FormulaWithModel()
libsbml.getLastParseL3Error()
libsbml.getDefaultL3ParserSettings()
def libsbml.formulaToL3StringWithSettings (   tree,
  settings 
)

Converts an AST to a string representation of a formula using a syntax basically derived from SBML Level 1, with behavior modifiable with custom settings.

formulaToL3StringWithSettings(ASTNode tree, L3ParserSettings settings)   string

This function behaves identically to SBML_formulaToL3String(), but its behavior can be modified by two settings in the

Parameters
settingsobject, namely:
  • ParseUnits: If this is set to 'true' (the default), the function will write out the units of any numerical ASTNodes that have them, producing (for example) '3 mL', '(3/4) m', or '5.5e-10 M'. If this is set to 'false', this function will only write out the number itself ('3', '(3/4)', and '5.5e-10', in the previous examples).
  • CollapseMinus: If this is set to 'false' (the default), the function will write out explicitly any doubly-nested unary minus ASTNodes, producing (for example) '–x' or even '—–3.1'. If this is set to 'true', the function will collapse the nodes before producing the infix, producing 'x' and '-3.1' in the previous examples.

All other settings will not affect the behavior of this function: the 'parseLog' setting is ignored, and 'log10(x)', 'ln(x)', and 'log(x, y)' are always produced. Nothing in the Model object is used, and whether Avogadro is a csymbol or not is immaterial to the produced infix.

Parameters
treethe AST to be converted.
settingsthe L3ParserSettings object used to modify behavior.
Returns
the formula from the given AST as an SBML Level 3 text-string mathematical formula. The caller owns the returned string and is responsible for freeing it when it is no longer needed.
See also
parseFormula()
SBML_parseL3Formula()
SBML_formulaToL3String()
def libsbml.formulaToString (   tree)

Converts an AST to a string representation of a formula using a syntax basically derived from SBML Level 1.

formulaToString(ASTNode tree)   string
The text-string form of mathematical formulas produced by formulaToString() and read by parseFormula() use a simple C-inspired infix notation taken from SBML Level 1. A formula in this text-string form therefore can be handed to a program that understands SBML Level 1 mathematical expressions, or used as part of a formula translation system. The syntax is described in detail in the documentation for ASTNode. The following are illustrative examples of formulas expressed using this syntax:
0.10 * k4^2
(vm * s1)/(km + s1)

Note that this facility is provided as a convenience by libSBML—the MathML standard does not actually define a 'string-form' equivalent to MathML expression trees, so the choice of formula syntax is somewhat arbitrary. The approach taken by libSBML is to use the syntax defined by SBML Level 1 (which in fact used a text-string representation of formulas and not MathML). This formula syntax is based mostly on C programming syntax, and may contain operators, function calls, symbols, and white space characters. The following table provides the precedence rules for the different entities that may appear in formula strings.

Token Operation Class Precedence Associates
namesymbol referenceoperand6n/a
(expression)expression groupingoperand6n/a
f(...)function callprefix6left
-negationunary5right
^powerbinary4left
*multiplicationbinary3left
/divisonbinary3left
+additionbinary2left
-subtractionbinary2left
,argument delimiterbinary1left
A table of the expression operators and their precedence in the text-string format for mathematical expressions used by SBML_parseFormula().

In the table above, operand implies the construct is an operand, prefix implies the operation is applied to the following arguments, unary implies there is one argument, and binary implies there are two arguments. The values in the Precedence column show how the order of different types of operation are determined. For example, the expression a * b + c is evaluated as (a * b) + c because the * operator has higher precedence. The Associates column shows how the order of similar precedence operations is determined; for example, a - b + c is evaluated as (a - b) + c because the + and - operators are left-associative.

The function call syntax consists of a function name, followed by optional white space, followed by an opening parenthesis token, followed by a sequence of zero or more arguments separated by commas (with each comma optionally preceded and/or followed by zero or more white space characters, followed by a closing parenthesis token. The function name must be chosen from one of the pre-defined functions in SBML or a user-defined function in the model. The following table lists the names of certain common mathematical functions; this table corresponds to Table 6 in the SBML Level 1 Version 2 specification:

Name Args Formula or meaning Argument Constraints Result constraints
absxabsolute value of x
acosxarc cosine of x in radians-1.0 ≤ x ≤ 1.00 ≤ acos(x) ≤ π
asinxarc sine of x in radians-1.0 ≤ x ≤ 1.00 ≤ asin(x) ≤ π
atanxarc tangent of x in radians0 ≤ atan(x) ≤ π
ceilxsmallest number not less than x whose value is an exact integer
cosxcosine of x
expxe x, where e is the base of the natural logarithm
floorxlargest number not greater than x whose value is an exact integer
logxnatural logarithm of xx > 0
log10xbase 10 logarithm of xx > 0
powx, yx y
sqrxx2
sqrtxxx > 0sqrt(x) ≥ 0
sinxsine of x
tanxtangent of xx ≠ n*π/2, for odd integer n
The names of mathematical functions defined in the SBML Level 1 Version 2 text-string formula syntax.
Warning
There are differences between the symbols used to represent the common mathematical functions and the corresponding MathML token names. This is a potential source of incompatibilities. Note in particular that in this text-string syntax, log(x) represents the natural logarithm, whereas in MathML, the natural logarithm is <ln/>. Application writers are urged to be careful when translating between text forms and MathML forms, especially if they provide a direct text-string input facility to users of their software systems.
Parameters
treethe AST to be converted.
Returns
the formula from the given AST as an SBML Level 1 text-string mathematical formula. The caller owns the returned string and is responsible for freeing it when it is no longer needed.
See also
libsbml.formulaToString()
libsbml.parseL3FormulaWithSettings()
libsbml.parseL3Formula()
libsbml.parseL3FormulaWithModel()
libsbml.getLastParseL3Error()
libsbml.getDefaultL3ParserSettings()
def libsbml.getDefaultL3ParserSettings ( )

Returns a copy of the default Level 3 ('L3') formula parser settings.

getDefaultL3ParserSettings()   L3ParserSettings

The data structure storing the settings allows callers to change the following parsing behaviors:

The text-string form of mathematical formulas read by the function parseL3Formula() and written by the function formulaToL3String() uses an expanded version of the syntax read and written by parseFormula() and formulaToString(), respectively. The latter two libSBML functions were originally developed to support conversion between SBML Levels 1 and 2, and were focused on the syntax of mathematical formulas used in SBML Level 1. With time, and the use of MathML in SBML Levels 2 and 3, it became clear that supporting Level 2 and 3's expanded mathematical syntax would be useful for software developers. To maintain backwards compatibility for libSBML users, the original formulaToString() and parseFormula() have been left untouched, and instead, the new functionality is provided in the form of parseL3Formula() and formulaToL3String().

The following lists the main differences in the formula syntax supported by the Level 3 ('L3') versions of the formula parsers and formatters, compared to what is supported by the Level 1-oriented parseFormula() and formulaToString():

  • Units may be asociated with bare numbers, using the following syntax:
    number unit
    The number may be in any form (an integer, real, or rational number), and the unit must conform to the syntax of an SBML identifier (technically, the type defined as SId in the SBML specifications). The whitespace between number and unit is optional.
  • The Boolean function symbols && (and), || (or), ! (not), and != (not equals) may be used.
  • The modulo operation is allowed as the symbol % and will produce a <piecewise> function in the corresponding MathML output by default, or can produce the MathML function rem, depending on the L3ParserSettings object (see L3ParserSettings_setParseModuloL3v2() ).
  • All inverse trigonometric functions may be defined in the infix either using arc as a prefix or simply a; in other words, both arccsc and acsc are interpreted as the operator arccosecant as defined in MathML 2.0. (Many functions in the simpler SBML Level 1 oriented parser implemented by parseFormula() are defined this way as well, but not all.)
  • The following expression is parsed as a rational number instead of as a numerical division:
    (integer/integer)
    Spaces are not allowed in this construct; in other words, "(3 / 4)" (with whitespace between the numbers and the operator) will be parsed into the MathML <divide> construct rather than a rational number. You can, however, assign units to a rational number as a whole; here is an example: "(3/4) ml". (In the case of division rather than a rational number, units are not interpreted in this way.)
  • Various parser and formatter behaviors may be altered through the use of a L3ParserSettings object in conjunction with the functions parseL3FormulaWithSettings() and formulaToL3StringWithSettings() The settings available include the following:
    • The function log with a single argument ("log(x)") can be parsed as log10(x), ln(x), or treated as an error, as desired.

    • Unary minus signs can be collapsed or preserved; that is, sequential pairs of unary minuses (e.g., "- -3") can be removed from the input entirely and single unary minuses can be incorporated into the number node, or all minuses can be preserved in the AST node structure.

    • Parsing of units embedded in the input string can be turned on and off.

    • The string avogadro can be parsed as a MathML csymbol or as an identifier.

    • The string % can be parsed either as a piecewise function or as the 'rem' function: a % b will either become

      piecewise(a - b*ceil(a/b), xor((a < 0), (b < 0)), a - b*floor(a/b))

      or

      rem(a, b).

      The latter is simpler, but the rem MathML is only allowed as of SBML Level 3 Version 2.

    • A Model object may optionally be provided to the parser using the variant function call parseL3FormulaWithModel() or stored in a L3ParserSettings object passed to the variant function parseL3FormulaWithSettings(). When a Model object is provided, identifiers (values of type SId ) from that model are used in preference to pre-defined MathML definitions for both symbols and functions. More precisely:

      • In the case of symbols: the Model entities whose identifiers will shadow identical symbols in the mathematical formula are: Species, Compartment, Parameter, Reaction, and SpeciesReference. For instance, if the parser is given a Model containing a Species with the identifier "pi", and the formula to be parsed is "3*pi", the MathML produced will contain the construct <ci> pi </ci> instead of the construct <pi/>.

      • In the case of user-defined functions: when a Model object is provided, SId values of user-defined functions present in the model will be used preferentially over pre-defined MathML functions. For example, if the passed-in Model contains a FunctionDefinition object with the identifier "sin", that function will be used instead of the predefined MathML function <sin/>.

    • An SBMLNamespaces object may optionally be provided to identify SBML Level 3 packages that extend the syntax understood by the formula parser. When the namespaces are provided, the parser will interpret possible additional syntax defined by the libSBML plug-ins implementing the SBML Level 3 packages; for example, it may understand vector/array extensions introduced by the SBML Level 3 Arrays package.

These configuration settings cannot be changed directly using the basic parser and formatter functions, but can be changed on a per-call basis by using the alternative functions parseL3FormulaWithSettings() and formulaToL3StringWithSettings().

Neither SBML nor the MathML standard define a 'string-form' equivalent to MathML expressions. The approach taken by libSBML is to start with the formula syntax defined by SBML Level 1 (which in fact used a custom text-string representation of formulas, and not MathML), and expand it to include the functionality described above. This formula syntax is based mostly on C programming syntax, and may contain operators, function calls, symbols, and white space characters. The following table provides the precedence rules for the different entities that may appear in formula strings.

Token Operation Class Preced. Assoc.
namesymbol referenceoperand8n/a
(expression)expression groupingoperand8n/a
f(...)function callprefix8left
^powerbinary7left
-, !negation, Boolean 'not'unary6right
*, /, %multip., div., modulobinary5left
+, -addition and subtractionbinary4left
==, <, >, <=, >=, !=Boolean comparisonsbinary3left
&&, ||Boolean 'and' and 'or'binary2left
,argument delimiterbinary1left
Expression operators and their precedence in the "Level 3" text-string format for mathematical expressions.

In the table above, operand implies the construct is an operand, prefix implies the operation is applied to the following arguments, unary implies there is one argument, and binary implies there are two arguments. The values in the Precedence column show how the order of different types of operation are determined. For example, the expression a + b * c is evaluated as a + (b * c) because the * operator has higher precedence. The Associates column shows how the order of similar precedence operations is determined; for example, a && b || c is evaluated as (a && b) || c because the && and || operators are left-associative and have the same precedence.

The function call syntax consists of a function name, followed by optional white space, followed by an opening parenthesis token, followed by a sequence of zero or more arguments separated by commas (with each comma optionally preceded and/or followed by zero or more white space characters), followed by a closing parenthesis token. The function name must be chosen from one of the pre-defined functions in SBML or a user-defined function in the model. The following table lists the names of certain common mathematical functions; this table corresponds to Table 6 in the SBML Level 1 Version 2 specification with additions based on the functions added in SBML Level 2 and Level 3:

Name Argument(s) Formula or meaning Argument Constraints Result constraints
abs x Absolute value of x.
acos, arccos x Arccosine of x in radians. –1.0 ≤ x ≤ 1.0 0 ≤ acos(x) ≤ π
acosh, arccosh x Hyperbolic arccosine of x in radians.
acot, arccot x Arccotangent of x in radians.
acoth, arccoth x Hyperbolic arccotangent of x in radians.
acsc, arccsc x Arccosecant of x in radians.
acsch, arccsch x Hyperbolic arccosecant of x in radians.
asec, arcsec x Arcsecant of x in radians.
asech, arcsech x Hyperbolic arcsecant of x in radians.
asin, arcsin xArcsine of x in radians. –1.0 ≤ x ≤ 1.0 0 ≤ asin(x) ≤ π
atan, arctan x Arctangent of x in radians. 0 ≤ atan(x) ≤ π
atanh, arctanh x Hyperbolic arctangent of x in radians.
ceil, ceiling x Smallest number not less than x whose value is an exact integer.
cos x Cosine of x
cosh x Hyperbolic cosine of x.
cot x Cotangent of x.
coth x Hyperbolic cotangent of x.
csc x Cosecant of x.
csch x Hyperbolic cosecant of x.
delay x, y The value of x at y time units in the past.
factorial n The factorial of n. Factorials are defined by n! = n*(n–1)* ... * 1. n must be an integer.
exp x e x, where e is the base of the natural logarithm.
floor x The largest number not greater than x whose value is an exact integer.
ln x Natural logarithm of x. x > 0
log x By default, the base 10 logarithm of x, but can be set to be the natural logarithm of x, or to be an illegal construct. x > 0
log x, y The base x logarithm of y. y > 0
log10 x Base 10 logarithm of x. x > 0
piecewise x1, y1, [x2, y2,] [...] [z] A piecewise function: if (y1), x1. Otherwise, if (y2), x2, etc. Otherwise, z. y1, y2, y3 [etc] must be Boolean
pow, power x, y x y.
root b, x The root base b of x.
sec x Secant of x.
sech x Hyperbolic secant of x.
sqr x x2.
sqrt x x. x > 0 sqrt(x) ≥ 0
sin x Sine of x.
sinh x Hyperbolic sine of x.
tan x Tangent of x. x ≠ n*π/2, for odd integer n
tanh x Hyperbolic tangent of x.
and x, y, z... Boolean and(x, y, z...): returns true if all of its arguments are true. Note that and is an n-ary function, taking 0 or more arguments, and that and() returns true. All arguments must be Boolean
not x Boolean not(x) x must be Boolean
or x, y, z... Boolean or(x, y, z...): returns true if at least one of its arguments is true. Note that or is an n-ary function, taking 0 or more arguments, and that or() returns false. All arguments must be Boolean
xor x, y, z... Boolean xor(x, y, z...): returns true if an odd number of its arguments is true. Note that xor is an n-ary function, taking 0 or more arguments, and that xor() returns false. All arguments must be Boolean
eq x, y, z... Boolean eq(x, y, z...): returns true if all arguments are equal. Note that eq is an n-ary function, but must take 2 or more arguments.
geq x, y, z... Boolean geq(x, y, z...): returns true if each argument is greater than or equal to the argument following it. Note that geq is an n-ary function, but must take 2 or more arguments.
gt x, y, z... Boolean gt(x, y, z...): returns true if each argument is greater than the argument following it. Note that gt is an n-ary function, but must take 2 or more arguments.
leq x, y, z... Boolean leq(x, y, z...): returns true if each argument is less than or equal to the argument following it. Note that leq is an n-ary function, but must take 2 or more arguments.
lt x, y, z... Boolean lt(x, y, z...): returns true if each argument is less than the argument following it. Note that lt is an n-ary function, but must take 2 or more arguments.
neq x, y Boolean x != y: returns true unless x and y are equal.
plus x, y, z... x + y + z + ...: The sum of the arguments of the function. Note that plus is an n-ary function taking 0 or more arguments, and that plus() returns 0.
times x, y, z... x * y * z * ...: The product of the arguments of the function. Note that times is an n-ary function taking 0 or more arguments, and that times() returns 1.
minus x, y xy.
divide x, y x / y.
Mathematical functions defined in the "Level 3" text-string formula syntax.

Parsing of the various MathML functions and constants are all case-insensitive by default: function names such as cos, Cos and COS are all parsed as the MathML cosine operator, <cos>. However, when a Model object is used in conjunction with either parseL3FormulaWithModel() or parseL3FormulaWithSettings(), any identifiers found in that model will be parsed in a case-sensitive way. For example, if a model contains a Species having the identifier Pi, the parser will parse "Pi" in the input as "<ci> Pi </ci>" but will continue to parse the symbols "pi" and "PI" as "<pi>".

As mentioned above, the manner in which the 'L3' versions of the formula parser and formatter interpret the function "log" can be changed. To do so, callers should use the function parseL3FormulaWithSettings() and pass it an appropriate L3ParserSettings object. By default, unlike the SBML Level 1 parser implemented by parseFormula(), the string quot;log" is interpreted as the base 10 logarithm, and not as the natural logarithm. However, you can change the interpretation to be base-10 log, natural log, or as an error; since the name 'log' by itself is ambiguous, you require that the parser uses log10 or ln instead, which are more clear. Please refer to parseL3FormulaWithSettings().

In addition, the following symbols will be translated to their MathML equivalents, if no symbol with the same SId identifier string exists in the Model object provided:

Name Meaning MathML
true Boolean value true <true/>
false Boolean value false <false/>
pi Mathematical constant pi <pi/>
avogadro Value of Avogadro's constant stipulated by SBML <csymbol encoding="text" definitionURL="http://www.sbml.org/sbml/symbols/avogadro"> avogadro </csymbol/>
time Simulation time as defined in SBML <csymbol encoding="text" definitionURL="http://www.sbml.org/sbml/symbols/time"> time </csymbol/>
inf, infinity Mathematical constant "infinity" <infinity/>
nan, notanumber Mathematical concept "not a number" <notanumber/>
Mathematical symbols defined in the "Level 3" text-string formula syntax.

Again, as mentioned above, whether the string quot;avogadro" is parsed as an AST node of type AST_NAME_AVOGADRO or AST_NAME is configurable; use the version of the parser function called parseL3FormulaWithSettings(). This Avogadro-related functionality is provided because SBML Level 2 models may not use AST_NAME_AVOGADRO AST nodes.

For more details about the parser, please see the definition of L3ParserSettings and parseL3Formula().

See also
parseL3Formula()
parseL3FormulaWithSettings()
formulaToL3StringWithSettings()
L3ParserSettings
def libsbml.getLastParseL3Error ( )

Returns the last error reported by the 'L3' mathematical formula parser.

getLastParseL3Error()   string

If the functions parseL3Formula(), parseL3FormulaWithSettings(), or parseL3FormulaWithModel() return None, an error is set internally. This function allows callers to retrieve information about the error.

Returns
a string describing the error that occurred. This will contain the input string the parser was trying to parse, the character it had parsed when it encountered the error, and a description of the error.
See also
parseL3Formula()
parseL3FormulaWithSettings()
parseL3FormulaWithModel()
getDefaultL3ParserSettings()
def libsbml.getLibSBMLDependencyVersionOf (   option)

Returns the version string for the dependency library used.

getLibSBMLDependencyVersionOf(long  option)   string  *
Parameters
optionthe library for which the version should be retrieved, this can be one of 'expat', 'libxml', 'xerces-c', 'bzip2', 'zip'
Returns
None in case libSBML has not been compiled against that library and a version string otherwise.
See also
isLibSBMLCompiledWith()
def libsbml.getLibSBMLDottedVersion ( )

Returns the version number of this copy of libSBML as a string.

getLibSBMLDottedVersion()   string  *
Returns
the libSBML version as a string; version 1.2.3 becomes '1.2.3'.
See also
getLibSBMLVersionString()
def libsbml.getLibSBMLVersion ( )

Returns the version number of this copy of libSBML as an integer.

getLibSBMLVersion()   int
Returns
the libSBML version as an integer; version 1.2.3 becomes 10203.
def libsbml.getLibSBMLVersionString ( )

Returns the version number of this copy of libSBML as a string without periods.

getLibSBMLVersionString()   string  *
Returns
the libSBML version as a string: version 1.2.3 becomes '10203'.
See also
getLibSBMLDottedVersion()
def libsbml.GroupKind_fromString (   code)

Returns the enumeration value corresponding to the given string or GROUP_KIND_UNKNOWN if there is no such match.

GroupKind_fromString(long  code)   long
Parameters
codethe string to convert to an enumeration value.
Returns
the corresponding value, or GROUP_KIND_UNKNOWN if no match is found.
Note
The matching is case-sensitive: 'classification' will return GROUP_KIND_CLASSIFICATION, but 'Classification' will return GROUP_KIND_UNKNOWN.
def libsbml.GroupKind_isValid (   gk)

Predicate returning 1 (true) or 0 (false) depending on whether the given enumeration value is valid.

GroupKind_isValid(long gk)   int
Parameters
gkthe enumeration value to query.
Returns
1 (true) if the value is GROUP_KIND_CLASSIFICATION, GROUP_KIND_PARTONOMY, or GROUP_KIND_COLLECTION; 0 (false) otherwise (including GROUP_KIND_UNKNOWN).
def libsbml.GroupKind_isValidString (   code)

Predicate returning 1 (true) or 0 (false) depending on whether the given string is a valid enumeration value.

GroupKind_isValidString(long  code)   int
Parameters
codethe string to query.
Returns
1 (true) if the string is 'classification', 'partonomy', or 'collection'; 0 (false) otherwise.
Note
The matching is case-sensitive: 'classification' will return 1 (true), but 'Classification' will return 0 (false).
def libsbml.GroupKind_toString (   gk)

Returns the string version of the provided enumeration value.

GroupKind_toString(long gk)   string  *
Parameters
gkthe enumeration value to convert.
Returns
A string corresponding to the given type: 'classification', 'partonomy', 'collection', or None if the value is GROUP_KIND_UNKNOWN or another invalid enumeration value.
Note
The string returned by this function is a pointer to a string literal defined in the libSBML library, and may not be modified or deleted.
def libsbml.GroupsExtension_getDefaultLevel ( )

Returns the default SBML Level implemented by this libSBML extension.

GroupsExtension_getDefaultLevel()   long
Returns
the SBML Level, as a long integereger.
Note
Because this is a static method on a class, the Python language interface for libSBML will contain two variants. One will be the expected, normal static method on the class (i.e., a regular methodName), and the other will be a standalone top-level function with the name ClassName_methodName(). This is merely an artifact of how the language interfaces are created in libSBML. The methods are functionally identical.
def libsbml.GroupsExtension_getDefaultPackageVersion ( )

Returns the default version of the SBML Level 3 package implemented by this libSBML extension.

GroupsExtension_getDefaultPackageVersion()   long
Returns
the default version number of the SBML Level 3 package definition, as a long integereger.
Note
Because this is a static method on a class, the Python language interface for libSBML will contain two variants. One will be the expected, normal static method on the class (i.e., a regular methodName), and the other will be a standalone top-level function with the name ClassName_methodName(). This is merely an artifact of how the language interfaces are created in libSBML. The methods are functionally identical.
def libsbml.GroupsExtension_getDefaultVersion ( )

Returns the default SBML Version implemented by this libSBML extension.

GroupsExtension_getDefaultVersion()   long
Returns
the Version within the default SBML Level, as a long integereger.
Note
Because this is a static method on a class, the Python language interface for libSBML will contain two variants. One will be the expected, normal static method on the class (i.e., a regular methodName), and the other will be a standalone top-level function with the name ClassName_methodName(). This is merely an artifact of how the language interfaces are created in libSBML. The methods are functionally identical.
def libsbml.GroupsExtension_getPackageName ( )

Returns the nickname of the SBML Level 3 package implemented by this libSBML extension.

GroupsExtension_getPackageName()   string
Returns
the package nickname, as a string.
Note
Because this is a static method on a class, the Python language interface for libSBML will contain two variants. One will be the expected, normal static method on the class (i.e., a regular methodName), and the other will be a standalone top-level function with the name ClassName_methodName(). This is merely an artifact of how the language interfaces are created in libSBML. The methods are functionally identical.
def libsbml.GroupsExtension_getXmlnsL3V1V1 ( )

Returns the XML namespace URI of the SBML Level 3 package implemented by this libSBML extension.

GroupsExtension_getXmlnsL3V1V1()   string
Returns
the XML namespace, as a string.
Note
Because this is a static method on a class, the Python language interface for libSBML will contain two variants. One will be the expected, normal static method on the class (i.e., a regular methodName), and the other will be a standalone top-level function with the name ClassName_methodName(). This is merely an artifact of how the language interfaces are created in libSBML. The methods are functionally identical.
def libsbml.int_array_frompointer (   t)
int_array_frompointer(int * t)   int_array
def libsbml.isLibSBMLCompiledWith (   option)

Returns an indication whether libSBML has been compiled with against a specific library.

isLibSBMLCompiledWith(long  option)   int
Parameters
optionthe library to test against, this can be one of 'expat', 'libxml', 'xerces-c', 'bzip2', 'zip'
Returns
0 in case the libSBML has not been compiled against that library and non-zero otherwise (for libraries that define an integer version number that number will be returned).
See also
getLibSBMLDependencyVersionOf()
def libsbml.LayoutExtension_getDefaultLevel ( )

Returns the default SBML Level used by this libSBML package extension.

LayoutExtension_getDefaultLevel()   long
Returns
the SBML Level.
Note
Because this is a static method on a class, the Python language interface for libSBML will contain two variants. One will be the expected, normal static method on the class (i.e., a regular methodName), and the other will be a standalone top-level function with the name ClassName_methodName(). This is merely an artifact of how the language interfaces are created in libSBML. The methods are functionally identical.
def libsbml.LayoutExtension_getDefaultPackageVersion ( )

Returns the default version of the SBML Level 3 package implemented by this libSBML extension.

LayoutExtension_getDefaultPackageVersion()   long
Returns
the default version number of the SBML Level 3 package definition.
Note
Because this is a static method on a class, the Python language interface for libSBML will contain two variants. One will be the expected, normal static method on the class (i.e., a regular methodName), and the other will be a standalone top-level function with the name ClassName_methodName(). This is merely an artifact of how the language interfaces are created in libSBML. The methods are functionally identical.
def libsbml.LayoutExtension_getDefaultVersion ( )

Returns the default SBML Version used by this libSBML package extension.

LayoutExtension_getDefaultVersion()   long
Returns
the Version within the default SBML Level.
Note
Because this is a static method on a class, the Python language interface for libSBML will contain two variants. One will be the expected, normal static method on the class (i.e., a regular methodName), and the other will be a standalone top-level function with the name ClassName_methodName(). This is merely an artifact of how the language interfaces are created in libSBML. The methods are functionally identical.
def libsbml.LayoutExtension_getPackageName ( )

Returns the nickname of the SBML Level 3 package implemented by this libSBML extension.

LayoutExtension_getPackageName()   string
Returns
the package nickname, as a string.
Note
Because this is a static method on a class, the Python language interface for libSBML will contain two variants. One will be the expected, normal static method on the class (i.e., a regular methodName), and the other will be a standalone top-level function with the name ClassName_methodName(). This is merely an artifact of how the language interfaces are created in libSBML. The methods are functionally identical.
def libsbml.LayoutExtension_getXmlnsL2 ( )

Returns the XML namespace URI of the SBML Level 2 version of the package implemented by this libSBML Extension.

LayoutExtension_getXmlnsL2()   string

Unique among the SBML Level 3 packages, the Layout package existed and was in widespread use prior to the introduction of SBML Level 3. The Layout package was used as model annotations in SBML Level 2. This method returns the SBML annotation XML namespace used for Level 2.

Returns
the XML namespace as a string.
Note
Because this is a static method on a class, the Python language interface for libSBML will contain two variants. One will be the expected, normal static method on the class (i.e., a regular methodName), and the other will be a standalone top-level function with the name ClassName_methodName(). This is merely an artifact of how the language interfaces are created in libSBML. The methods are functionally identical.
def libsbml.LayoutExtension_getXmlnsL3V1V1 ( )

Returns the XML namespace URI of the SBML Level 3 package implemented by this libSBML extension.

LayoutExtension_getXmlnsL3V1V1()   string
Returns
the XML namespace as a string.
Note
Because this is a static method on a class, the Python language interface for libSBML will contain two variants. One will be the expected, normal static method on the class (i.e., a regular methodName), and the other will be a standalone top-level function with the name ClassName_methodName(). This is merely an artifact of how the language interfaces are created in libSBML. The methods are functionally identical.
def libsbml.LayoutExtension_getXmlnsXSI ( )

Returns the XML namespace URI of any additional XML namespaces needed or used by this SBML Level 3 package.

LayoutExtension_getXmlnsXSI()   string
Returns
the XML namespace as a string.
Note
Because this is a static method on a class, the Python language interface for libSBML will contain two variants. One will be the expected, normal static method on the class (i.e., a regular methodName), and the other will be a standalone top-level function with the name ClassName_methodName(). This is merely an artifact of how the language interfaces are created in libSBML. The methods are functionally identical.
def libsbml.ModelQualifierType_fromString (   s)

This method takes a string and returns a model qualifier representing the string.

ModelQualifierType_fromString(long  s)   long

This method takes a string as argument and returns a model qualifier type corresponding to that string. For example, passing it the string 'isDescribedBy' will return the qualifier BQM_IS_DESCRIBED_BY.

Parameters
sthe string to translate to a libSBML constant value representing a model qualifier.
Returns
a libSBML qualifier enumeration value for the given human readable qualifier name.
def libsbml.ModelQualifierType_toString (   type)

This method takes a model qualifier type code and returns a string representing the code.

ModelQualifierType_toString(long type)   string  *

This method takes a model qualifier type as argument and returns a string name corresponding to that code. For example, passing it the qualifier BQM_IS_DESCRIBED_BY will return the string 'isDescribedBy'.

Parameters
typethe value to translate. The value should be a libSBML constant whose name begins with BQM_, such as (for example) BQM_IS.
Returns
a human readable qualifier name for the given qualifier type.
Note
The caller does not own the returned string and is therefore not allowed to modify it.
def libsbml.MultiExtension_getDefaultLevel ( )

Returns the default SBML Level used by this libSBML package extension.

MultiExtension_getDefaultLevel()   long
Returns
the SBML Level.
Note
Because this is a static method on a class, the Python language interface for libSBML will contain two variants. One will be the expected, normal static method on the class (i.e., a regular methodName), and the other will be a standalone top-level function with the name ClassName_methodName(). This is merely an artifact of how the language interfaces are created in libSBML. The methods are functionally identical.
def libsbml.MultiExtension_getDefaultPackageVersion ( )

Returns the default version of the SBML Level 3 package implemented by this libSBML extension.

MultiExtension_getDefaultPackageVersion()   long
Returns
the default version number of the SBML Level 3 package definition.
Note
Because this is a static method on a class, the Python language interface for libSBML will contain two variants. One will be the expected, normal static method on the class (i.e., a regular methodName), and the other will be a standalone top-level function with the name ClassName_methodName(). This is merely an artifact of how the language interfaces are created in libSBML. The methods are functionally identical.
def libsbml.MultiExtension_getDefaultVersion ( )

Returns the default SBML Version used by this libSBML package extension.

MultiExtension_getDefaultVersion()   long
Returns
the Version within the default SBML Level.
Note
Because this is a static method on a class, the Python language interface for libSBML will contain two variants. One will be the expected, normal static method on the class (i.e., a regular methodName), and the other will be a standalone top-level function with the name ClassName_methodName(). This is merely an artifact of how the language interfaces are created in libSBML. The methods are functionally identical.
def libsbml.MultiExtension_getPackageName ( )

Returns the nickname of the SBML Level 3 package implemented by this libSBML extension.

MultiExtension_getPackageName()   string
Returns
the package nickname, as a string.
Note
Because this is a static method on a class, the Python language interface for libSBML will contain two variants. One will be the expected, normal static method on the class (i.e., a regular methodName), and the other will be a standalone top-level function with the name ClassName_methodName(). This is merely an artifact of how the language interfaces are created in libSBML. The methods are functionally identical.
def libsbml.MultiExtension_getXmlnsL3V1V1 ( )

Returns the XML namespace URI of the SBML Level 3 package implemented by this libSBML extension.

MultiExtension_getXmlnsL3V1V1()   string
Returns
the XML namespace as a string.
Note
Because this is a static method on a class, the Python language interface for libSBML will contain two variants. One will be the expected, normal static method on the class (i.e., a regular methodName), and the other will be a standalone top-level function with the name ClassName_methodName(). This is merely an artifact of how the language interfaces are created in libSBML. The methods are functionally identical.
def libsbml.OperationReturnValue_toString (   returnValue)

This method takes an SBML operation return value and returns a string representing the code.

OperationReturnValue_toString(int returnValue)   string  *
Parameters
returnValuethe operation return value to convert to a string.
Returns
a human readable name for the given operation return value .
Note
The caller does not own the returned string and is therefore not allowed to modify it.
def libsbml.parseFormula (   formula)

Parses the given SBML formula and returns a representation of it as an Abstract Syntax Tree (AST).

parseFormula(long  formula)   ASTNode
The text-string form of mathematical formulas produced by formulaToString() and read by parseFormula() use a simple C-inspired infix notation taken from SBML Level 1. A formula in this text-string form therefore can be handed to a program that understands SBML Level 1 mathematical expressions, or used as part of a formula translation system. The syntax is described in detail in the documentation for ASTNode. The following are illustrative examples of formulas expressed using this syntax:
0.10 * k4^2
(vm * s1)/(km + s1)

Note that this facility is provided as a convenience by libSBML—the MathML standard does not actually define a 'string-form' equivalent to MathML expression trees, so the choice of formula syntax is somewhat arbitrary. The approach taken by libSBML is to use the syntax defined by SBML Level 1 (which in fact used a text-string representation of formulas and not MathML). This formula syntax is based mostly on C programming syntax, and may contain operators, function calls, symbols, and white space characters. The following table provides the precedence rules for the different entities that may appear in formula strings.

Token Operation Class Precedence Associates
namesymbol referenceoperand6n/a
(expression)expression groupingoperand6n/a
f(...)function callprefix6left
-negationunary5right
^powerbinary4left
*multiplicationbinary3left
/divisonbinary3left
+additionbinary2left
-subtractionbinary2left
,argument delimiterbinary1left
A table of the expression operators and their precedence in the text-string format for mathematical expressions used by SBML_parseFormula().

In the table above, operand implies the construct is an operand, prefix implies the operation is applied to the following arguments, unary implies there is one argument, and binary implies there are two arguments. The values in the Precedence column show how the order of different types of operation are determined. For example, the expression a * b + c is evaluated as (a * b) + c because the * operator has higher precedence. The Associates column shows how the order of similar precedence operations is determined; for example, a - b + c is evaluated as (a - b) + c because the + and - operators are left-associative.

The function call syntax consists of a function name, followed by optional white space, followed by an opening parenthesis token, followed by a sequence of zero or more arguments separated by commas (with each comma optionally preceded and/or followed by zero or more white space characters, followed by a closing parenthesis token. The function name must be chosen from one of the pre-defined functions in SBML or a user-defined function in the model. The following table lists the names of certain common mathematical functions; this table corresponds to Table 6 in the SBML Level 1 Version 2 specification:

Name Args Formula or meaning Argument Constraints Result constraints
absxabsolute value of x
acosxarc cosine of x in radians-1.0 ≤ x ≤ 1.00 ≤ acos(x) ≤ π
asinxarc sine of x in radians-1.0 ≤ x ≤ 1.00 ≤ asin(x) ≤ π
atanxarc tangent of x in radians0 ≤ atan(x) ≤ π
ceilxsmallest number not less than x whose value is an exact integer
cosxcosine of x
expxe x, where e is the base of the natural logarithm
floorxlargest number not greater than x whose value is an exact integer
logxnatural logarithm of xx > 0
log10xbase 10 logarithm of xx > 0
powx, yx y
sqrxx2
sqrtxxx > 0sqrt(x) ≥ 0
sinxsine of x
tanxtangent of xx ≠ n*π/2, for odd integer n
The names of mathematical functions defined in the SBML Level 1 Version 2 text-string formula syntax.
Warning
There are differences between the symbols used to represent the common mathematical functions and the corresponding MathML token names. This is a potential source of incompatibilities. Note in particular that in this text-string syntax, log(x) represents the natural logarithm, whereas in MathML, the natural logarithm is <ln/>. Application writers are urged to be careful when translating between text forms and MathML forms, especially if they provide a direct text-string input facility to users of their software systems.
Parameters
formulathe text-string formula expression to be parsed
Returns
the root node of the AST corresponding to the formula, or None if an error occurred in parsing the formula
See also
libsbml.formulaToString()
libsbml.parseL3FormulaWithSettings()
libsbml.parseL3Formula()
libsbml.parseL3FormulaWithModel()
libsbml.getLastParseL3Error()
libsbml.getDefaultL3ParserSettings()
def libsbml.parseL3Formula (   formula)

Parses a text string as a mathematical formula and returns an AST representation of it.

parseL3Formula(long  formula)   ASTNode
The text-string form of mathematical formulas read by the function parseL3Formula() and written by the function formulaToL3String() uses an expanded version of the syntax read and written by parseFormula() and formulaToString(), respectively. The latter two libSBML functions were originally developed to support conversion between SBML Levels 1 and 2, and were focused on the syntax of mathematical formulas used in SBML Level 1. With time, and the use of MathML in SBML Levels 2 and 3, it became clear that supporting Level 2 and 3's expanded mathematical syntax would be useful for software developers. To maintain backwards compatibility for libSBML users, the original formulaToString() and parseFormula() have been left untouched, and instead, the new functionality is provided in the form of parseL3Formula() and formulaToL3String().

The following lists the main differences in the formula syntax supported by the Level 3 ('L3') versions of the formula parsers and formatters, compared to what is supported by the Level 1-oriented parseFormula() and formulaToString():

  • Units may be asociated with bare numbers, using the following syntax:
    number unit
    The number may be in any form (an integer, real, or rational number), and the unit must conform to the syntax of an SBML identifier (technically, the type defined as SId in the SBML specifications). The whitespace between number and unit is optional.
  • The Boolean function symbols && (and), || (or), ! (not), and != (not equals) may be used.
  • The modulo operation is allowed as the symbol % and will produce a <piecewise> function in the corresponding MathML output by default, or can produce the MathML function rem, depending on the L3ParserSettings object (see L3ParserSettings_setParseModuloL3v2() ).
  • All inverse trigonometric functions may be defined in the infix either using arc as a prefix or simply a; in other words, both arccsc and acsc are interpreted as the operator arccosecant as defined in MathML 2.0. (Many functions in the simpler SBML Level 1 oriented parser implemented by parseFormula() are defined this way as well, but not all.)
  • The following expression is parsed as a rational number instead of as a numerical division:
    (integer/integer)
    Spaces are not allowed in this construct; in other words, "(3 / 4)" (with whitespace between the numbers and the operator) will be parsed into the MathML <divide> construct rather than a rational number. You can, however, assign units to a rational number as a whole; here is an example: "(3/4) ml". (In the case of division rather than a rational number, units are not interpreted in this way.)
  • Various parser and formatter behaviors may be altered through the use of a L3ParserSettings object in conjunction with the functions parseL3FormulaWithSettings() and formulaToL3StringWithSettings() The settings available include the following:
    • The function log with a single argument ("log(x)") can be parsed as log10(x), ln(x), or treated as an error, as desired.

    • Unary minus signs can be collapsed or preserved; that is, sequential pairs of unary minuses (e.g., "- -3") can be removed from the input entirely and single unary minuses can be incorporated into the number node, or all minuses can be preserved in the AST node structure.

    • Parsing of units embedded in the input string can be turned on and off.

    • The string avogadro can be parsed as a MathML csymbol or as an identifier.

    • The string % can be parsed either as a piecewise function or as the 'rem' function: a % b will either become

      piecewise(a - b*ceil(a/b), xor((a < 0), (b < 0)), a - b*floor(a/b))

      or

      rem(a, b).

      The latter is simpler, but the rem MathML is only allowed as of SBML Level 3 Version 2.

    • A Model object may optionally be provided to the parser using the variant function call parseL3FormulaWithModel() or stored in a L3ParserSettings object passed to the variant function parseL3FormulaWithSettings(). When a Model object is provided, identifiers (values of type SId ) from that model are used in preference to pre-defined MathML definitions for both symbols and functions. More precisely:

      • In the case of symbols: the Model entities whose identifiers will shadow identical symbols in the mathematical formula are: Species, Compartment, Parameter, Reaction, and SpeciesReference. For instance, if the parser is given a Model containing a Species with the identifier "pi", and the formula to be parsed is "3*pi", the MathML produced will contain the construct <ci> pi </ci> instead of the construct <pi/>.

      • In the case of user-defined functions: when a Model object is provided, SId values of user-defined functions present in the model will be used preferentially over pre-defined MathML functions. For example, if the passed-in Model contains a FunctionDefinition object with the identifier "sin", that function will be used instead of the predefined MathML function <sin/>.

    • An SBMLNamespaces object may optionally be provided to identify SBML Level 3 packages that extend the syntax understood by the formula parser. When the namespaces are provided, the parser will interpret possible additional syntax defined by the libSBML plug-ins implementing the SBML Level 3 packages; for example, it may understand vector/array extensions introduced by the SBML Level 3 Arrays package.

These configuration settings cannot be changed directly using the basic parser and formatter functions, but can be changed on a per-call basis by using the alternative functions parseL3FormulaWithSettings() and formulaToL3StringWithSettings().

Neither SBML nor the MathML standard define a 'string-form' equivalent to MathML expressions. The approach taken by libSBML is to start with the formula syntax defined by SBML Level 1 (which in fact used a custom text-string representation of formulas, and not MathML), and expand it to include the functionality described above. This formula syntax is based mostly on C programming syntax, and may contain operators, function calls, symbols, and white space characters. The following table provides the precedence rules for the different entities that may appear in formula strings.

Token Operation Class Preced. Assoc.
namesymbol referenceoperand8n/a
(expression)expression groupingoperand8n/a
f(...)function callprefix8left
^powerbinary7left
-, !negation, Boolean 'not'unary6right
*, /, %multip., div., modulobinary5left
+, -addition and subtractionbinary4left
==, <, >, <=, >=, !=Boolean comparisonsbinary3left
&&, ||Boolean 'and' and 'or'binary2left
,argument delimiterbinary1left
Expression operators and their precedence in the "Level 3" text-string format for mathematical expressions.

In the table above, operand implies the construct is an operand, prefix implies the operation is applied to the following arguments, unary implies there is one argument, and binary implies there are two arguments. The values in the Precedence column show how the order of different types of operation are determined. For example, the expression a + b * c is evaluated as a + (b * c) because the * operator has higher precedence. The Associates column shows how the order of similar precedence operations is determined; for example, a && b || c is evaluated as (a && b) || c because the && and || operators are left-associative and have the same precedence.

The function call syntax consists of a function name, followed by optional white space, followed by an opening parenthesis token, followed by a sequence of zero or more arguments separated by commas (with each comma optionally preceded and/or followed by zero or more white space characters), followed by a closing parenthesis token. The function name must be chosen from one of the pre-defined functions in SBML or a user-defined function in the model. The following table lists the names of certain common mathematical functions; this table corresponds to Table 6 in the SBML Level 1 Version 2 specification with additions based on the functions added in SBML Level 2 and Level 3:

Name Argument(s) Formula or meaning Argument Constraints Result constraints
abs x Absolute value of x.
acos, arccos x Arccosine of x in radians. –1.0 ≤ x ≤ 1.0 0 ≤ acos(x) ≤ π
acosh, arccosh x Hyperbolic arccosine of x in radians.
acot, arccot x Arccotangent of x in radians.
acoth, arccoth x Hyperbolic arccotangent of x in radians.
acsc, arccsc x Arccosecant of x in radians.
acsch, arccsch x Hyperbolic arccosecant of x in radians.
asec, arcsec x Arcsecant of x in radians.
asech, arcsech x Hyperbolic arcsecant of x in radians.
asin, arcsin xArcsine of x in radians. –1.0 ≤ x ≤ 1.0 0 ≤ asin(x) ≤ π
atan, arctan x Arctangent of x in radians. 0 ≤ atan(x) ≤ π
atanh, arctanh x Hyperbolic arctangent of x in radians.
ceil, ceiling x Smallest number not less than x whose value is an exact integer.
cos x Cosine of x
cosh x Hyperbolic cosine of x.
cot x Cotangent of x.
coth x Hyperbolic cotangent of x.
csc x Cosecant of x.
csch x Hyperbolic cosecant of x.
delay x, y The value of x at y time units in the past.
factorial n The factorial of n. Factorials are defined by n! = n*(n–1)* ... * 1. n must be an integer.
exp x e x, where e is the base of the natural logarithm.
floor x The largest number not greater than x whose value is an exact integer.
ln x Natural logarithm of x. x > 0
log x By default, the base 10 logarithm of x, but can be set to be the natural logarithm of x, or to be an illegal construct. x > 0
log x, y The base x logarithm of y. y > 0
log10 x Base 10 logarithm of x. x > 0
piecewise x1, y1, [x2, y2,] [...] [z] A piecewise function: if (y1), x1. Otherwise, if (y2), x2, etc. Otherwise, z. y1, y2, y3 [etc] must be Boolean
pow, power x, y x y.
root b, x The root base b of x.
sec x Secant of x.
sech x Hyperbolic secant of x.
sqr x x2.
sqrt x x. x > 0 sqrt(x) ≥ 0
sin x Sine of x.
sinh x Hyperbolic sine of x.
tan x Tangent of x. x ≠ n*π/2, for odd integer n
tanh x Hyperbolic tangent of x.
and x, y, z... Boolean and(x, y, z...): returns true if all of its arguments are true. Note that and is an n-ary function, taking 0 or more arguments, and that and() returns true. All arguments must be Boolean
not x Boolean not(x) x must be Boolean
or x, y, z... Boolean or(x, y, z...): returns true if at least one of its arguments is true. Note that or is an n-ary function, taking 0 or more arguments, and that or() returns false. All arguments must be Boolean
xor x, y, z... Boolean xor(x, y, z...): returns true if an odd number of its arguments is true. Note that xor is an n-ary function, taking 0 or more arguments, and that xor() returns false. All arguments must be Boolean
eq x, y, z... Boolean eq(x, y, z...): returns true if all arguments are equal. Note that eq is an n-ary function, but must take 2 or more arguments.
geq x, y, z... Boolean geq(x, y, z...): returns true if each argument is greater than or equal to the argument following it. Note that geq is an n-ary function, but must take 2 or more arguments.
gt x, y, z... Boolean gt(x, y, z...): returns true if each argument is greater than the argument following it. Note that gt is an n-ary function, but must take 2 or more arguments.
leq x, y, z... Boolean leq(x, y, z...): returns true if each argument is less than or equal to the argument following it. Note that leq is an n-ary function, but must take 2 or more arguments.
lt x, y, z... Boolean lt(x, y, z...): returns true if each argument is less than the argument following it. Note that lt is an n-ary function, but must take 2 or more arguments.
neq x, y Boolean x != y: returns true unless x and y are equal.
plus x, y, z... x + y + z + ...: The sum of the arguments of the function. Note that plus is an n-ary function taking 0 or more arguments, and that plus() returns 0.
times x, y, z... x * y * z * ...: The product of the arguments of the function. Note that times is an n-ary function taking 0 or more arguments, and that times() returns 1.
minus x, y xy.
divide x, y x / y.
Mathematical functions defined in the "Level 3" text-string formula syntax.

Parsing of the various MathML functions and constants are all case-insensitive by default: function names such as cos, Cos and COS are all parsed as the MathML cosine operator, <cos>. However, when a Model object is used in conjunction with either parseL3FormulaWithModel() or parseL3FormulaWithSettings(), any identifiers found in that model will be parsed in a case-sensitive way. For example, if a model contains a Species having the identifier Pi, the parser will parse "Pi" in the input as "<ci> Pi </ci>" but will continue to parse the symbols "pi" and "PI" as "<pi>".

As mentioned above, the manner in which the 'L3' versions of the formula parser and formatter interpret the function "log" can be changed. To do so, callers should use the function parseL3FormulaWithSettings() and pass it an appropriate L3ParserSettings object. By default, unlike the SBML Level 1 parser implemented by parseFormula(), the string quot;log" is interpreted as the base 10 logarithm, and not as the natural logarithm. However, you can change the interpretation to be base-10 log, natural log, or as an error; since the name 'log' by itself is ambiguous, you require that the parser uses log10 or ln instead, which are more clear. Please refer to parseL3FormulaWithSettings().

In addition, the following symbols will be translated to their MathML equivalents, if no symbol with the same SId identifier string exists in the Model object provided:

Name Meaning MathML
true Boolean value true <true/>
false Boolean value false <false/>
pi Mathematical constant pi <pi/>
avogadro Value of Avogadro's constant stipulated by SBML <csymbol encoding="text" definitionURL="http://www.sbml.org/sbml/symbols/avogadro"> avogadro </csymbol/>
time Simulation time as defined in SBML <csymbol encoding="text" definitionURL="http://www.sbml.org/sbml/symbols/time"> time </csymbol/>
inf, infinity Mathematical constant "infinity" <infinity/>
nan, notanumber Mathematical concept "not a number" <notanumber/>
Mathematical symbols defined in the "Level 3" text-string formula syntax.

Again, as mentioned above, whether the string quot;avogadro" is parsed as an AST node of type AST_NAME_AVOGADRO or AST_NAME is configurable; use the version of the parser function called parseL3FormulaWithSettings(). This Avogadro-related functionality is provided because SBML Level 2 models may not use AST_NAME_AVOGADRO AST nodes.

Parameters
formulathe text-string formula expression to be parsed.
Returns
the root node of an AST representing the mathematical formula, or None if an error occurred while parsing the formula. When None is returned, an error is recorded internally; information about the error can be retrieved using getLastParseL3Error().
See also
parseL3FormulaWithSettings()
parseL3FormulaWithModel()
parseFormula()
formulaToL3StringWithSettings()
formulaToL3String()
formulaToString()
L3ParserSettings
getDefaultL3ParserSettings()
getLastParseL3Error()
Note
We urge developers to keep in mind that the text-string formula syntax is specific to libSBML. Neither MathML nor SBML define a text-string format for mathematical formulas. LibSBML's particular syntax should not be considered to be a canonical or standard general-purpose mathematical expression syntax. LibSBML provides methods for parsing and transforming text-string math formulas back and forth from AST structures for the convenience of calling applications, but it is important to keep the system's limitations in mind.
def libsbml.parseL3FormulaWithModel (   formula,
  model 
)

Parses a text string as a mathematical formula using a Model to resolve symbols, and returns an AST representation of the result.

parseL3FormulaWithModel(long  formula, Model model)   ASTNode

This is identical to parseL3Formula(), except that this function uses the given model in the argument model to check against identifiers that appear in the formula. For more information about the parser, please see the definition of L3ParserSettings and the function parseL3Formula().

Parameters
formulathe mathematical formula expression to be parsed.
modelthe Model object to use for checking identifiers.
Returns
the root node of an AST representing the mathematical formula, or None if an error occurred while parsing the formula. When None is returned, an error is recorded internally; information about the error can be retrieved using getLastParseL3Error().
See also
parseL3Formula()
parseL3FormulaWithSettings()
parseL3FormulaWithModel()
parseFormula()
getLastParseL3Error()
L3ParserSettings
def libsbml.parseL3FormulaWithSettings (   formula,
  settings 
)

Parses a text string as a mathematical formula using specific parser settings and returns an AST representation of the result.

parseL3FormulaWithSettings(long  formula, L3ParserSettings settings)   ASTNode

This is identical to parseL3Formula(), except that this function uses the parser settings given in the argument settings. The settings override the default parsing behavior. The following parsing behaviors can be configured:

  • A Model object may optionally be provided to use identifiers (values of type SId) from the model in preference to pre-defined MathML symbols More precisely, the Model entities whose identifiers will shadow identical symbols in the mathematical formula are: Species, Compartment, Parameter, Reaction, and SpeciesReference. For instance, if the parser is given a Model containing a Species with the identifier "pi", and the formula to be parsed is "3*pi", the MathML produced by the parser will contain the construct <ci> pi </ci> instead of the construct <pi/>. Another example, if the passed-in Model contains a FunctionDefinition with the identifier "sin", that function will be used instead of the predefined MathML function <sin/>.
  • The function log with a single argument ("log(x)") can be parsed as log10(x), ln(x), or treated as an error, as desired.
  • Unary minus signs can be either collapsed or preserved; that is, the parser can either (1) remove sequential pairs of unary minuses (e.g., "- -3") from the input and incorporate single unary minuses into the number node, or (2) preserve all minuses in the AST node structure, turning them into ASTNode objects of type AST_MINUS.
  • The character sequence "number id" can be interpreted as a numerical value number followed by units of measurement indicated by id, or it can be treated as a syntax error. (In Level 3, MathML <cn> elements can have an attribute named units placed in the SBML namespace, which can be used to indicate the units to be associated with the number. The text-string infix formula parser allows units to be placed after raw numbers; they are interpreted as unit identifiers for units defined by the SBML specification or in the containing Model object.)
  • The symbol avogadro can be parsed either as a MathML csymbol or as a identifier. More specifically, "avogadro" can be treated as an ASTNode of type AST_NAME_AVOGADRO or of type AST_NAME.
  • Strings that match built-in functions and constants can either be parsed as a match regardless of capitalization, or may be required to be all-lower-case to be considered a match.
  • LibSBML plug-ins implementing support for SBML Level 3 packages may introduce extensions to the syntax understood by the parser. The precise nature of the extensions will be documented by the individual package plug-ins. An example of a possible extension is a notation for vectors and arrays, introduced by the SBML Level 3 Arrays package.

For more details about the parser, please see the definition of L3ParserSettings and parseL3FormulaWithSettings().

Parameters
formulathe mathematical formula expression to be parsed.
settingsthe settings to be used for this parser invocation.
Returns
the root node of an AST representing the mathematical formula, or None if an error occurred while parsing the formula. When None is returned, an error is recorded internally; information about the error can be retrieved using getLastParseL3Error().
See also
parseL3Formula()
parseL3FormulaWithSettings()
parseL3FormulaWithModel()
parseFormula()
getLastParseL3Error()
L3ParserSettings
def libsbml.parseLayoutAnnotation (   annotation,
  layouts 
)
parseLayoutAnnotation(XMLNode annotation, ListOfLayouts layouts)
 

takes an annotation that has been read into the model identifies the RDF elements and creates a List of Layouts from the annotation

def libsbml.parseLayoutId (   sr)

Creates an XMLNode that represents the layoutId annotation of the species reference from the given SpeciesReference object.

parseLayoutId(SimpleSpeciesReference sr)   XMLNode
 
def libsbml.parseLayouts (   pModel)

Creates an XMLNode that represents the layouts of the model from the given Model object.

parseLayouts(Model pModel)   XMLNode
 
def libsbml.parseSpeciesReferenceAnnotation (   annotation,
  sr 
)
parseSpeciesReferenceAnnotation(XMLNode annotation, SimpleSpeciesReference sr)
 

takes an annotation that has been read into the species reference identifies the id elements and set the id of the species reference

def libsbml.QualExtension_getDefaultLevel ( )

Returns the default SBML Level used by this libSBML package extension.

QualExtension_getDefaultLevel()   long
Returns
the SBML Level.
Note
Because this is a static method on a class, the Python language interface for libSBML will contain two variants. One will be the expected, normal static method on the class (i.e., a regular methodName), and the other will be a standalone top-level function with the name ClassName_methodName(). This is merely an artifact of how the language interfaces are created in libSBML. The methods are functionally identical.
def libsbml.QualExtension_getDefaultPackageVersion ( )

Returns the default version of the SBML Level 3 package implemented by this libSBML extension.

QualExtension_getDefaultPackageVersion()   long
Returns
the default version number of the SBML Level 3 package definition.
Note
Because this is a static method on a class, the Python language interface for libSBML will contain two variants. One will be the expected, normal static method on the class (i.e., a regular methodName), and the other will be a standalone top-level function with the name ClassName_methodName(). This is merely an artifact of how the language interfaces are created in libSBML. The methods are functionally identical.
def libsbml.QualExtension_getDefaultVersion ( )

Returns the default SBML Version used by this libSBML package extension.

QualExtension_getDefaultVersion()   long
Returns
the Version within the default SBML Level.
Note
Because this is a static method on a class, the Python language interface for libSBML will contain two variants. One will be the expected, normal static method on the class (i.e., a regular methodName), and the other will be a standalone top-level function with the name ClassName_methodName(). This is merely an artifact of how the language interfaces are created in libSBML. The methods are functionally identical.
def libsbml.QualExtension_getPackageName ( )

Returns the nickname of the SBML Level 3 package implemented by this libSBML extension.

QualExtension_getPackageName()   string
Returns
the package nickname, as a string.
Note
Because this is a static method on a class, the Python language interface for libSBML will contain two variants. One will be the expected, normal static method on the class (i.e., a regular methodName), and the other will be a standalone top-level function with the name ClassName_methodName(). This is merely an artifact of how the language interfaces are created in libSBML. The methods are functionally identical.
def libsbml.QualExtension_getXmlnsL3V1V1 ( )

Returns the XML namespace URI of the SBML Level 3 package implemented by this libSBML extension.

QualExtension_getXmlnsL3V1V1()   string
Returns
the XML namespace as a string.
Note
Because this is a static method on a class, the Python language interface for libSBML will contain two variants. One will be the expected, normal static method on the class (i.e., a regular methodName), and the other will be a standalone top-level function with the name ClassName_methodName(). This is merely an artifact of how the language interfaces are created in libSBML. The methods are functionally identical.
def libsbml.RDFAnnotationParser_createAnnotation ( )

Creates a blank annotation and returns its root XMLNode object.

RDFAnnotationParser_createAnnotation()   XMLNode

This creates a completely empty SBML <annotation> element. It is not attached to any SBML element. An example of how this might be used is illustrated in the following code fragment. In this example, suppose that content is an XMLNode object previously created, containing MIRIAM-style annotations, and that sbmlObject is an SBML object derived from SBase (e.g., a Model, or a Species, or a Compartment, etc.). Then:

1 RDF = RDFAnnotationParser.createRDFAnnotation() # Create XML structure.
2 success = RDF.addChild(...content...) # Put some content into it.
3 ... # Check return code value.
4 
5 annot = RDFAnnotationParser.createAnnotation() # Create <annotation>.
6 success = annot.addChild(RDF) # Put the annotation into it.
7 ... # Check return code value.
8 
9 success = sbmlObject.setAnnotation(annot) # Set object's annotation.
10 ... # Check return code value.

The SBML specification contains more information about the format of annotations. We urge readers to consult Section 6 of the SBML Level 2 (Versions 2–4) and SBML Level 3 specification documents.

Returns
a pointer to an XMLNode for the annotation.
Note
Because this is a static method on a class, the Python language interface for libSBML will contain two variants. One will be the expected, normal static method on the class (i.e., a regular methodName), and the other will be a standalone top-level function with the name ClassName_methodName(). This is merely an artifact of how the language interfaces are created in libSBML. The methods are functionally identical.
See also
RDFAnnotationParser.createRDFAnnotation()
def libsbml.RDFAnnotationParser_createCVTerms (   obj)

Takes a list of CVTerm objects and creates a the RDF 'Description' element.

RDFAnnotationParser_createCVTerms(SBase obj)   XMLNode

This essentially takes the given SBML object, reads out the CVTerm objects attached to it, creates an RDF 'Description' element to hold the terms, and adds each term with appropriate qualifiers.

Parameters
objthe SBML object to start from.
Returns
the XMLNode tree corresponding to the Description element of an RDF annotation.
Note
Because this is a static method on a class, the Python language interface for libSBML will contain two variants. One will be the expected, normal static method on the class (i.e., a regular methodName), and the other will be a standalone top-level function with the name ClassName_methodName(). This is merely an artifact of how the language interfaces are created in libSBML. The methods are functionally identical.
def libsbml.RDFAnnotationParser_createRDFAnnotation (   level = 3,
  version = 1 
)

Creates a blank RDF element suitable for use in SBML annotations.

createRDFAnnotation(long  level=3, long  version=1)   XMLNode
createRDFAnnotation(long  level=3)   XMLNode
RDFAnnotationParser_createRDFAnnotation()   XMLNode

The annotation created by this method has namespace declarations for all the relevant XML namespaces used in RDF annotations and also has an empty RDF element. The result is the following XML:

<rdf:RDF xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#'
         xmlns:dc='http://purl.org/dc/elements/1.1/'
         xmlns:dcterms='http://purl.org/dc/terms/'
         xmlns:vCard='http://www.w3.org/2001/vcard-rdf/3.0#'
         xmlns:bqbiol='http://biomodels.net/biology-qualifiers/'
         xmlns:bqmodel='http://biomodels.net/model-qualifiers/' >

</rdf:RDF>

Note that this does not create the containing SBML <annotation> element; the method RDFAnnotationParser.createAnnotation() is available for creating the container.

Returns
a pointer to an XMLNode.
Note
Because this is a static method on a class, the Python language interface for libSBML will contain two variants. One will be the expected, normal static method on the class (i.e., a regular methodName), and the other will be a standalone top-level function with the name ClassName_methodName(). This is merely an artifact of how the language interfaces are created in libSBML. The methods are functionally identical.
See also
RDFAnnotationParser.createAnnotation()
Note
Owing to the way that language interfaces are created in libSBML, this documentation may show methods that define default values for parameters with text that has the form parameter = value. This is not to be intepreted as a Python keyword argument; the use of a parameter name followed by an equals sign followed by a value is only meant to indicate a default value if the argument is not provided at all. It is not a keyword in the Python sense.
def libsbml.RDFAnnotationParser_deleteRDFAnnotation (   annotation)

Deletes any SBML MIRIAM RDF annotation found in the given XMLNode tree and returns any remaining annotation content.

RDFAnnotationParser_deleteRDFAnnotation(XMLNode annotation)   XMLNode

The name of the XMLNode given as parameter annotation must be 'annotation', or else this method returns None. The method will walk down the XML structure looking for elements that are in the RDF XML namespace, and remove them if they conform to the syntax of a History or CVTerm element.

Parameters
annotationthe XMLNode tree within which the RDF annotation is to be found and deleted.
Returns
the XMLNode structure that is left after RDF annotations are deleted.
Note
Because this is a static method on a class, the Python language interface for libSBML will contain two variants. One will be the expected, normal static method on the class (i.e., a regular methodName), and the other will be a standalone top-level function with the name ClassName_methodName(). This is merely an artifact of how the language interfaces are created in libSBML. The methods are functionally identical.
def libsbml.RDFAnnotationParser_deleteRDFCVTermAnnotation (   annotation)

Deletes any SBML MIRIAM RDF 'CVTerm' annotation found in the given XMLNode tree and returns any remaining annotation content.

RDFAnnotationParser_deleteRDFCVTermAnnotation(XMLNode annotation)   XMLNode

The name of the XMLNode given as parameter annotation must be 'annotation', or else this method returns None. The method will walk down the XML structure looking for elements that are in the RDF XML namespace, and remove any that conform to the syntax of a CVTerm element.

Parameters
annotationthe XMLNode tree within which the RDF annotation is to be found and deleted.
Returns
the XMLNode structure that is left after RDF annotations are deleted.
Note
Because this is a static method on a class, the Python language interface for libSBML will contain two variants. One will be the expected, normal static method on the class (i.e., a regular methodName), and the other will be a standalone top-level function with the name ClassName_methodName(). This is merely an artifact of how the language interfaces are created in libSBML. The methods are functionally identical.
def libsbml.RDFAnnotationParser_deleteRDFHistoryAnnotation (   annotation)

Deletes any SBML MIRIAM RDF 'History' annotation found in the given XMLNode tree and returns any remaining annotation content.

RDFAnnotationParser_deleteRDFHistoryAnnotation(XMLNode annotation)   XMLNode

The name of the XMLNode given as parameter annotation must be 'annotation', or else this method returns None. The method will walk down the XML structure looking for elements that are in the RDF XML namespace, and remove any that conform to the syntax of a History element.

Parameters
annotationthe XMLNode tree within which the RDF annotation is to be found and deleted.
Returns
the XMLNode structure that is left after RDF annotations are deleted.
Note
Because this is a static method on a class, the Python language interface for libSBML will contain two variants. One will be the expected, normal static method on the class (i.e., a regular methodName), and the other will be a standalone top-level function with the name ClassName_methodName(). This is merely an artifact of how the language interfaces are created in libSBML. The methods are functionally identical.
def libsbml.RDFAnnotationParser_parseCVTerms (   obj)

Takes a list of CVTerm objects and creates a complete SBML annotation around it.

RDFAnnotationParser_parseCVTerms(SBase obj)   XMLNode

This essentially takes the given SBML object, reads out the CVTerm objects attached to it, callsRDFAnnotationParser.createRDFAnnotation() to create an RDF annotation to hold the terms, and finally callsRDFAnnotationParser.createAnnotation() to wrap the result as an SBML <annotation> element.

Parameters
objthe SBML object to start from.
Returns
the XMLNode tree corresponding to the annotation.
Note
Because this is a static method on a class, the Python language interface for libSBML will contain two variants. One will be the expected, normal static method on the class (i.e., a regular methodName), and the other will be a standalone top-level function with the name ClassName_methodName(). This is merely an artifact of how the language interfaces are created in libSBML. The methods are functionally identical.
def libsbml.RDFAnnotationParser_parseModelHistory (   obj)

Reads the model history and cvTerms stored in obj and creates the XML structure for an SBML annotation representing that metadata if there is a model history stored in obj.

RDFAnnotationParser_parseModelHistory(SBase obj)   XMLNode
Parameters
objany SBase object.
Returns
the XMLNode corresponding to an annotation containing MIRIAM-compliant model history and CV term information in RDF format.
Note
If the object does not have a history element stored then None is returned even if CVTerms are present.
Because this is a static method on a class, the Python language interface for libSBML will contain two variants. One will be the expected, normal static method on the class (i.e., a regular methodName), and the other will be a standalone top-level function with the name ClassName_methodName(). This is merely an artifact of how the language interfaces are created in libSBML. The methods are functionally identical.
def libsbml.RDFAnnotationParser_parseOnlyModelHistory (   obj)

Reads the model history stored in obj and creates the XML structure for an SBML annotation representing that history.

RDFAnnotationParser_parseOnlyModelHistory(SBase obj)   XMLNode
Parameters
objany SBase object.
Returns
the XMLNode corresponding to an annotation containing MIRIAM-compliant model history information in RDF format.
Note
Because this is a static method on a class, the Python language interface for libSBML will contain two variants. One will be the expected, normal static method on the class (i.e., a regular methodName), and the other will be a standalone top-level function with the name ClassName_methodName(). This is merely an artifact of how the language interfaces are created in libSBML. The methods are functionally identical.
def libsbml.RDFAnnotationParser_parseRDFAnnotation (   args)

Parses an annotation (given as an XMLNode tree) into a list of CVTerm objects.

parseRDFAnnotation(XMLNode annotation, long  metaId, XMLInputStream stream)   ModelHistory
parseRDFAnnotation(XMLNode annotation, long  metaId)   ModelHistory
parseRDFAnnotation(XMLNode annotation)   ModelHistory
parseRDFAnnotation(XMLNode annotation, CVTermList CVTerms)
parseRDFAnnotation(XMLNode annotation, CVTermList CVTerms, long  metaId, XMLInputStream stream)
RDFAnnotationParser_parseRDFAnnotation(XMLNode annotation, CVTermList CVTerms, long  metaId)

This is used to take an annotation that has been read into an SBML model, identify the RDF elements within it, and create a list of corresponding CVTerm (controlled vocabulary term) objects.

Parameters
annotationXMLNode containing the annotation.
CVTermslist of CVTerm objects to be created.
metaIdoptional metaId, if set only the RDF annotation for this metaId will be returned.
streamoptional XMLInputStream that facilitates error logging.
Note
Because this is a static method on a class, the Python language interface for libSBML will contain two variants. One will be the expected, normal static method on the class (i.e., a regular methodName), and the other will be a standalone top-level function with the name ClassName_methodName(). This is merely an artifact of how the language interfaces are created in libSBML. The methods are functionally identical.
Documentation note:
The native C++ implementation of this method defines a default argument value. In the documentation generated for different libSBML language bindings, you may or may not see corresponding arguments in the method declarations. For example, in Java and C#, a default argument is handled by declaring two separate methods, with one of them having the argument and the other one lacking the argument. However, the libSBML documentation will be identical for both methods. Consequently, if you are reading this and do not see an argument even though one is described, please look for descriptions of other variants of this method near where this one appears in the documentation.
def libsbml.readMathMLFromString (   xml)

Reads the MathML from the given XML string, constructs a corresponding abstract syntax tree, and returns a pointer to the root of the tree.

readMathMLFromString(long  xml)   ASTNode
Parameters
xmla string containing a full MathML expression
Returns
the root of an AST corresponding to the given mathematical expression, otherwise None is returned if the given string is None or invalid.
def libsbml.readMathMLFromStringWithNamespaces (   xml,
  xmlns 
)

Reads the MathML from the given XML string, constructs a corresponding abstract syntax tree, and returns a pointer to the root of the tree.

readMathMLFromStringWithNamespaces(long  xml, XMLNamespaces xmlns)   ASTNode
Parameters
xmla string containing a full MathML expression
xmlnsan XMLNamespaces object containing namespaces that are considered active during the read. (For example, an SBML Level 3 package namespace.)
Returns
the root of an AST corresponding to the given mathematical expression, otherwise None is returned if the given string is None or invalid.
def libsbml.readSBML (   filename)

Reads an SBML document from the given file.

readSBML(long  filename)   SBMLDocument

If the file named filename does not exist or its content is not valid SBML, one or more errors will be logged with the SBMLDocument object returned by this method. Callers can use the methods on SBMLDocument such as SBMLDocument.getNumErrors(), SBMLDocument.getNumErrors() and SBMLDocument.getError() to get the errors. The object returned by SBMLDocument.getError() is an SBMLError object, and it has methods to get the error code, category, and severity level of the problem, as well as a textual description of the problem. The possible severity levels range from informational messages to fatal errors; see the documentation for SBMLError for more information.

If the file filename could not be read, the file-reading error will appear first. The error code can provide a clue about what happened. For example, a file might be unreadable (either because it does not actually exist or because the user does not have the necessary access privileges to read it) or some sort of file operation error may have been reported by the underlying operating system. Callers can check for these situations using a program fragment such as the following:

1 reader = SBMLReader()
2 if reader == None:
3  # Handle the truly exceptional case of no object created here.
4 
5 doc = reader.readSBMLFromFile(filename)
6 if doc.getNumErrors() > 0:
7  if doc.getError(0).getErrorId() == XMLFileUnreadable:
8  # Handle case of unreadable file here.
9  elif doc.getError(0).getErrorId() == XMLFileOperationError:
10  # Handle case of other file error here.
11  else:
12  # Handle other error cases here.
If the given filename ends with the suffix '.gz' (for example, 'myfile.xml.gz'), the file is assumed to be compressed in gzip format and will be automatically decompressed upon reading. Similarly, if the given filename ends with '.zip' or '.bz2', the file is assumed to be compressed in zip or bzip2 format (respectively). Files whose names lack these suffixes will be read uncompressed. Note that if the file is in zip format but the archive contains more than one file, only the first file in the archive will be read and the rest ignored.
To read a gzip/zip file, libSBML needs to be configured and linked with the zlib library at compile time. It also needs to be linked with the bzip2 library to read files in bzip2 format. (Both of these are the default configurations for libSBML.) Errors about unreadable files will be logged if a compressed filename is given and libSBML was not linked with the corresponding required library.
def libsbml.readSBMLFromFile (   filename)

Reads an SBML document from the given file.

readSBMLFromFile(long  filename)   SBMLDocument

If the file named filename does not exist or its content is not valid SBML, one or more errors will be logged with the SBMLDocument object returned by this method. Callers can use the methods on SBMLDocument such as SBMLDocument.getNumErrors(), SBMLDocument.getNumErrors() and SBMLDocument.getError() to get the errors. The object returned by SBMLDocument.getError() is an SBMLError object, and it has methods to get the error code, category, and severity level of the problem, as well as a textual description of the problem. The possible severity levels range from informational messages to fatal errors; see the documentation for SBMLError for more information.

If the file filename could not be read, the file-reading error will appear first. The error code can provide a clue about what happened. For example, a file might be unreadable (either because it does not actually exist or because the user does not have the necessary access privileges to read it) or some sort of file operation error may have been reported by the underlying operating system. Callers can check for these situations using a program fragment such as the following:

1 reader = SBMLReader()
2 if reader == None:
3  # Handle the truly exceptional case of no object created here.
4 
5 doc = reader.readSBMLFromFile(filename)
6 if doc.getNumErrors() > 0:
7  if doc.getError(0).getErrorId() == XMLFileUnreadable:
8  # Handle case of unreadable file here.
9  elif doc.getError(0).getErrorId() == XMLFileOperationError:
10  # Handle case of other file error here.
11  else:
12  # Handle other error cases here.
If the given filename ends with the suffix '.gz' (for example, 'myfile.xml.gz'), the file is assumed to be compressed in gzip format and will be automatically decompressed upon reading. Similarly, if the given filename ends with '.zip' or '.bz2', the file is assumed to be compressed in zip or bzip2 format (respectively). Files whose names lack these suffixes will be read uncompressed. Note that if the file is in zip format but the archive contains more than one file, only the first file in the archive will be read and the rest ignored.
To read a gzip/zip file, libSBML needs to be configured and linked with the zlib library at compile time. It also needs to be linked with the bzip2 library to read files in bzip2 format. (Both of these are the default configurations for libSBML.) Errors about unreadable files will be logged if a compressed filename is given and libSBML was not linked with the corresponding required library.
Parameters
filenamethe name or full pathname of the file to be read.
Returns
a pointer to the SBMLDocument structure created from the SBML content in filename.
def libsbml.readSBMLFromString (   xml)

Reads an SBML document from a text string.

readSBMLFromString(long  xml)   SBMLDocument

This method is flexible with respect to the presence of an XML declaration at the beginning of the string. In particular, if the string in xml does not begin with the XML declaration

<?xml version='1.0' encoding='UTF-8'?>

then this method will automatically prepend the declaration to xml.

This method will log a fatal error if the content given in the parameter xml is not in SBML format. See the method documentation for SBMLReader.readSBML() for an example of code for testing the returned error code.

Parameters
xmla string containing a full SBML model.
Returns
a pointer to the SBMLDocument structure created from the SBML content in xml.
Note
When using this method to read an SBMLDocument that uses the SBML Level 3 Hierarchical Model Composition package (comp) the document location cannot be set automatically. Thus, if the model contains references to ExternalModelDefinition objects, it will be necessary to manually set the document URI location (SBMLDocument.setLocationURI() ) in order to facilitate resolving these models.
def libsbml.Relation_fromString (   code)

Returns the long enumeration corresponding to the given string or MULTI_RELATION_UNKNOWN if there is no such match.

Relation_fromString(long  code)   long
Parameters
codethe string to convert to a long.
Returns
the corresponding long or MULTI_RELATION_UNKNOWN if no match is found.
Note
The matching is case-sensitive: 'and' will return MULTI_RELATION_AND, but 'And' will return MULTI_RELATION_UNKNOWN.
def libsbml.Relation_toString (   r)

Returns the string version of the provided long enumeration.

Relation_toString(long r)   string  *
Parameters
rthe long enumeration value to convert.
Returns
A string corresponding to the given type: 'and', 'or', 'not', or None if the value is MULTI_RELATION_UNKNOWN or another invalid enumeration value.
Note
The string returned by this function is a pointer to a string literal defined in the libSBML library, and may not be modified or deleted.
def libsbml.RenderExtension_getDefaultLevel ( )

Returns the default SBML Level this extension.

RenderExtension_getDefaultLevel()   long
 
def libsbml.RenderExtension_getDefaultPackageVersion ( )

Returns the default SBML version this extension.

RenderExtension_getDefaultPackageVersion()   long
 
def libsbml.RenderExtension_getDefaultVersion ( )

Returns the default SBML Version this extension.

RenderExtension_getDefaultVersion()   long
 
def libsbml.RenderExtension_getPackageName ( )

Returns the package name of this extension.

RenderExtension_getPackageName()   string
 
def libsbml.RenderExtension_getXmlnsL2 ( )

Returns URI of L2 version of supported versions of this package.

RenderExtension_getXmlnsL2()   string
 
def libsbml.RenderExtension_getXmlnsL3V1V1 ( )

Returns URI of supported versions of this package.

RenderExtension_getXmlnsL3V1V1()   string
 
def libsbml.SBMLConverterRegistry_getInstance ( )

Returns the singleton instance for the converter registry.

SBMLConverterRegistry_getInstance()   SBMLConverterRegistry

Prior to using the registry, callers have to obtain a copy of the registry. This static method provides the means for doing that.

Returns
the singleton for the converter registry.
def libsbml.SBMLDocument_getDefaultLevel ( )

The default SBML Level of new SBMLDocument objects.

SBMLDocument_getDefaultLevel()   long
This 'default Level' corresponds to the most recent SBML specification Level available at the time libSBML version 5.18.0 was released. The default Level is used by SBMLDocument if no Level is explicitly specified at the time of the construction of an SBMLDocument instance.
Returns
an integer indicating the most recent SBML specification Level.
Note
Because this is a static method on a class, the Python language interface for libSBML will contain two variants. One will be the expected, normal static method on the class (i.e., a regular methodName), and the other will be a standalone top-level function with the name ClassName_methodName(). This is merely an artifact of how the language interfaces are created in libSBML. The methods are functionally identical.
See also
SBMLDocument.getDefaultVersion()
def libsbml.SBMLDocument_getDefaultVersion ( )

The default Version of new SBMLDocument objects.

SBMLDocument_getDefaultVersion()   long
This 'default Version' corresponds to the most recent Version within the most recent Level of SBML available at the time libSBML version 5.18.0 was released. The default Version is used by SBMLDocument if no Version is explicitly specified at the time of the construction of an SBMLDocument instance.
Returns
an integer indicating the most recent SBML specification Version.
Note
Because this is a static method on a class, the Python language interface for libSBML will contain two variants. One will be the expected, normal static method on the class (i.e., a regular methodName), and the other will be a standalone top-level function with the name ClassName_methodName(). This is merely an artifact of how the language interfaces are created in libSBML. The methods are functionally identical.
See also
SBMLDocument.getDefaultLevel()
def libsbml.SBMLExtensionRegistry_disablePackage (   package)

Disables the package with the given URI or name.

SBMLExtensionRegistry_disablePackage(string package)
Parameters
packagea string representing the URI or name of the SBML package whose package extension is to be disabled.
def libsbml.SBMLExtensionRegistry_enablePackage (   package)

Enables the package with the given URI / name.

SBMLExtensionRegistry_enablePackage(string package)
Parameters
packagethe name or URI of a package to enable.
def libsbml.SBMLExtensionRegistry_getAllRegisteredPackageNames ( )

Returns a list of registered packages.

SBMLExtensionRegistry_getAllRegisteredPackageNames()   std::vector< std::string >

This method returns a vector of strings containing the nicknames of the SBML packages for which package extensions are registered with this copy of libSBML. The vector will contain string objects.

Returns
a vector of strings of the registered package names.
def libsbml.SBMLExtensionRegistry_getInstance ( )

Returns a singleton instance of the registry.

SBMLExtensionRegistry_getInstance()   SBMLExtensionRegistry

Callers need to obtain a copy of the package extension registry before they can invoke its methods. The registry is implemented as a singleton, and this is the method callers can use to get a copy of it.

Returns
the instance of the SBMLExtensionRegistry object.
def libsbml.SBMLExtensionRegistry_getNumRegisteredPackages ( )

Returns the number of registered packages.

SBMLExtensionRegistry_getNumRegisteredPackages()   long
Returns
a count of the registered package extensions.
def libsbml.SBMLExtensionRegistry_getRegisteredPackageName (   index)

Returns the nth registered package.

SBMLExtensionRegistry_getRegisteredPackageName(long  index)   string
Parameters
indexzero-based index of the package name to return.
Returns
the package name with the given index, or None if none such exists.
See also
getNumRegisteredPackages()
def libsbml.SBMLExtensionRegistry_isPackageEnabled (   package)

Returns True if the named package is enabled.

SBMLExtensionRegistry_isPackageEnabled(string package)   bool
Parameters
packagethe name or URI of a package to test.
Returns
True if the package is enabled, False otherwise.
def libsbml.SBMLNamespaces_freeSBMLNamespaces (   supportedNS)

Frees the list of supported namespaces as generated by getSupportedNamespaces().

SBMLNamespaces_freeSBMLNamespaces(List * supportedNS)
Parameters
supportedNSthe list to be freed.
Note
Because this is a static method on a class, the Python language interface for libSBML will contain two variants. One will be the expected, normal static method on the class (i.e., a regular methodName), and the other will be a standalone top-level function with the name ClassName_methodName(). This is merely an artifact of how the language interfaces are created in libSBML. The methods are functionally identical.
def libsbml.SBMLNamespaces_getSBMLNamespaceURI (   level,
  version 
)

Returns a string representing the SBML XML namespace for the given level and version of SBML.

SBMLNamespaces_getSBMLNamespaceURI(long  level, long  version)   string
Parameters
levelthe SBML level.
versionthe SBML version.
Returns
a string representing the SBML namespace that reflects the SBML Level and Version specified.
Note
Because this is a static method on a class, the Python language interface for libSBML will contain two variants. One will be the expected, normal static method on the class (i.e., a regular methodName), and the other will be a standalone top-level function with the name ClassName_methodName(). This is merely an artifact of how the language interfaces are created in libSBML. The methods are functionally identical.
def libsbml.SBMLNamespaces_getSupportedNamespaces ( )

Returns a list of all supported SBMLNamespaces in this version of libsbml.

SBMLNamespaces_getSupportedNamespaces()   List  *
Returns
a list with supported SBML namespaces.
Note
Because this is a static method on a class, the Python language interface for libSBML will contain two variants. One will be the expected, normal static method on the class (i.e., a regular methodName), and the other will be a standalone top-level function with the name ClassName_methodName(). This is merely an artifact of how the language interfaces are created in libSBML. The methods are functionally identical.
def libsbml.SBMLNamespaces_isSBMLNamespace (   uri)

Predicate returning True if the given URL is one of SBML XML namespaces.

SBMLNamespaces_isSBMLNamespace(string uri)   bool
Parameters
urithe URI of namespace.
Returns
True if the 'uri' is one of SBML namespaces, False otherwise.
Note
Because this is a static method on a class, the Python language interface for libSBML will contain two variants. One will be the expected, normal static method on the class (i.e., a regular methodName), and the other will be a standalone top-level function with the name ClassName_methodName(). This is merely an artifact of how the language interfaces are created in libSBML. The methods are functionally identical.
def libsbml.SBMLReader_hasBzip2 ( )

Static method; returns True if this copy of libSBML supports bzip2 format compression.

SBMLReader_hasBzip2()   bool
Returns
True if libSBML is linked with the bzip2 libraries, False otherwise.
Note
Because this is a static method on a class, the Python language interface for libSBML will contain two variants. One will be the expected, normal static method on the class (i.e., a regular methodName), and the other will be a standalone top-level function with the name ClassName_methodName(). This is merely an artifact of how the language interfaces are created in libSBML. The methods are functionally identical.
See also
SBMLReader.hasZlib()
def libsbml.SBMLReader_hasZlib ( )

Static method; returns True if this copy of libSBML supports gzip and zip format compression.

SBMLReader_hasZlib()   bool
Returns
True if libSBML has been linked with the zlib library, False otherwise.
Note
Because this is a static method on a class, the Python language interface for libSBML will contain two variants. One will be the expected, normal static method on the class (i.e., a regular methodName), and the other will be a standalone top-level function with the name ClassName_methodName(). This is merely an artifact of how the language interfaces are created in libSBML. The methods are functionally identical.
See also
SBMLReader.hasBzip2()
def libsbml.SBMLResolverRegistry_deleteResolerRegistryInstance ( )
SBMLResolverRegistry_deleteResolerRegistryInstance()
 

deletes the static resolver registry instance

def libsbml.SBMLResolverRegistry_getInstance ( )

Returns the singleton instance for the resolver registry.

SBMLResolverRegistry_getInstance()   SBMLResolverRegistry

Prior to using the registry, callers have to obtain a copy of the registry. This static method provides the means for doing that.

Returns
the singleton for the resolver registry.
def libsbml.SBMLTypeCode_toString (   tc,
  pkgName 
)

This method takes an SBML type code and returns a string representing the code.

SBMLTypeCode_toString(int tc, long  pkgName)   string  *

LibSBML attaches an identifying code to every kind of SBML object. These are known as SBML type codes. In the Python language interface for libSBML, the type codes are defined as static integer constants in the interface class libsbml. The names of the type codes all begin with the characters SBML_.

Returns
a human readable name for the given SBML type code.
Note
The caller does not own the returned string and is therefore not allowed to modify it.
def libsbml.SBMLWriter_hasBzip2 ( )

Predicate returning True if this copy of libSBML has been linked with the bzip2 library.

SBMLWriter_hasBzip2()   bool

LibSBML supports reading and writing files compressed with either bzip2 or zip/gzip compression. The facility depends on libSBML having been compiled with the necessary support libraries. This method allows a calling program to inquire whether that is the case for the copy of libSBML it is using.

Returns
True if libSBML is linked with bzip2, False otherwise.
Note
Because this is a static method on a class, the Python language interface for libSBML will contain two variants. One will be the expected, normal static method on the class (i.e., a regular methodName), and the other will be a standalone top-level function with the name ClassName_methodName(). This is merely an artifact of how the language interfaces are created in libSBML. The methods are functionally identical.
See also
SBMLWriter.hasZlib()
def libsbml.SBMLWriter_hasZlib ( )

Predicate returning True if this copy of libSBML has been linked with the zlib library.

SBMLWriter_hasZlib()   bool

LibSBML supports reading and writing files compressed with either bzip2 or zip/gzip compression. The facility depends on libSBML having been compiled with the necessary support libraries. This method allows a calling program to inquire whether that is the case for the copy of libSBML it is using.

Returns
True if libSBML is linked with zlib, False otherwise.
Note
Because this is a static method on a class, the Python language interface for libSBML will contain two variants. One will be the expected, normal static method on the class (i.e., a regular methodName), and the other will be a standalone top-level function with the name ClassName_methodName(). This is merely an artifact of how the language interfaces are created in libSBML. The methods are functionally identical.
See also
SBMLWriter.hasBzip2()
def libsbml.SBO_checkTerm (   args)

This method has multiple variants; they differ in the arguments they accept.

checkTerm(string sboTerm)   bool
SBO_checkTerm(int sboTerm)   bool

Each variant is described separately below.


Method variant with the following signature:
checkTerm(string sboTerm)

Checks the format of the given SBO identifier string.

Returns
True if sboTerm is in the correct format (a zero-padded, seven digit string), False otherwise.
Note
Because this is a static method on a class, the Python language interface for libSBML will contain two variants. One will be the expected, normal static method on the class (i.e., a regular methodName), and the other will be a standalone top-level function with the name ClassName_methodName(). This is merely an artifact of how the language interfaces are created in libSBML. The methods are functionally identical.

Method variant with the following signature:
checkTerm(int sboTerm)

Checks the format of the given SBO identifier, given in the form of the integer portion alone.

Returns
True if sboTerm is in the range (0000000–9999999), False otherwise.
Note
Because this is a static method on a class, the Python language interface for libSBML will contain two variants. One will be the expected, normal static method on the class (i.e., a regular methodName), and the other will be a standalone top-level function with the name ClassName_methodName(). This is merely an artifact of how the language interfaces are created in libSBML. The methods are functionally identical.
def libsbml.SBO_intToString (   sboTerm)

Returns the integer as a correctly formatted SBO identifier string.

SBO_intToString(int sboTerm)   string
Returns
the given integer sboTerm as a zero-padded seven digit string.
Note
If the sboTerm is not in the correct range (0000000–9999999), an empty string is returned.
Because this is a static method on a class, the Python language interface for libSBML will contain two variants. One will be the expected, normal static method on the class (i.e., a regular methodName), and the other will be a standalone top-level function with the name ClassName_methodName(). This is merely an artifact of how the language interfaces are created in libSBML. The methods are functionally identical.
def libsbml.SBO_isConservationLaw (   term)

Returns True if the given term identifier comes from the stated branch of SBO.

SBO_isConservationLaw(long  term)   bool
Returns
True if term is-a SBO 'conservation law', False otherwise.
Note
Because this is a static method on a class, the Python language interface for libSBML will contain two variants. One will be the expected, normal static method on the class (i.e., a regular methodName), and the other will be a standalone top-level function with the name ClassName_methodName(). This is merely an artifact of how the language interfaces are created in libSBML. The methods are functionally identical.
def libsbml.SBO_isContinuousFramework (   term)

Returns True if the given term identifier comes from the stated branch of SBO.

SBO_isContinuousFramework(long  term)   bool
Returns
True if term is-a SBO 'continuous framework', False otherwise.
Note
Because this is a static method on a class, the Python language interface for libSBML will contain two variants. One will be the expected, normal static method on the class (i.e., a regular methodName), and the other will be a standalone top-level function with the name ClassName_methodName(). This is merely an artifact of how the language interfaces are created in libSBML. The methods are functionally identical.
def libsbml.SBO_isDiscreteFramework (   term)

Returns True if the given term identifier comes from the stated branch of SBO.

SBO_isDiscreteFramework(long  term)   bool
Returns
True if term is-a SBO 'discrete framework', False otherwise.
Note
Because this is a static method on a class, the Python language interface for libSBML will contain two variants. One will be the expected, normal static method on the class (i.e., a regular methodName), and the other will be a standalone top-level function with the name ClassName_methodName(). This is merely an artifact of how the language interfaces are created in libSBML. The methods are functionally identical.
def libsbml.SBO_isEntity (   term)

Returns True if the given term identifier comes from the stated branch of SBO.

SBO_isEntity(long  term)   bool
Note
The 'entity' SBO term is now known as 'physical entity representation'.
Returns
True if term is-a SBO 'entity', False otherwise.
Note
Because this is a static method on a class, the Python language interface for libSBML will contain two variants. One will be the expected, normal static method on the class (i.e., a regular methodName), and the other will be a standalone top-level function with the name ClassName_methodName(). This is merely an artifact of how the language interfaces are created in libSBML. The methods are functionally identical.
def libsbml.SBO_isEvent (   term)

Returns True if the given term identifier comes from the stated branch of SBO.

SBO_isEvent(long  term)   bool
Returns
True if term is-a SBO 'event', False otherwise.
Note
Because this is a static method on a class, the Python language interface for libSBML will contain two variants. One will be the expected, normal static method on the class (i.e., a regular methodName), and the other will be a standalone top-level function with the name ClassName_methodName(). This is merely an artifact of how the language interfaces are created in libSBML. The methods are functionally identical.
def libsbml.SBO_isFunctionalCompartment (   term)

Returns True if the given term identifier comes from the stated branch of SBO.

SBO_isFunctionalCompartment(long  term)   bool
Returns
True if term is-a SBO 'functional compartment', False otherwise.
Note
Because this is a static method on a class, the Python language interface for libSBML will contain two variants. One will be the expected, normal static method on the class (i.e., a regular methodName), and the other will be a standalone top-level function with the name ClassName_methodName(). This is merely an artifact of how the language interfaces are created in libSBML. The methods are functionally identical.
def libsbml.SBO_isFunctionalEntity (   term)

Returns True if the given term identifier comes from the stated branch of SBO.

SBO_isFunctionalEntity(long  term)   bool
Returns
True if term is-a SBO 'functional entity', False otherwise.
Note
Because this is a static method on a class, the Python language interface for libSBML will contain two variants. One will be the expected, normal static method on the class (i.e., a regular methodName), and the other will be a standalone top-level function with the name ClassName_methodName(). This is merely an artifact of how the language interfaces are created in libSBML. The methods are functionally identical.
def libsbml.SBO_isInteraction (   term)

Returns True if the given term identifier comes from the stated branch of SBO.

SBO_isInteraction(long  term)   bool
Note
The 'interaction' SBO term is now known as 'occurring entity representation'.
Returns
True if term is-a SBO 'interaction', False otherwise.
Note
Because this is a static method on a class, the Python language interface for libSBML will contain two variants. One will be the expected, normal static method on the class (i.e., a regular methodName), and the other will be a standalone top-level function with the name ClassName_methodName(). This is merely an artifact of how the language interfaces are created in libSBML. The methods are functionally identical.
def libsbml.SBO_isKineticConstant (   term)

Returns True if the given term identifier comes from the stated branch of SBO.

SBO_isKineticConstant(long  term)   bool
Returns
True if term is-a SBO 'kinetic constant', False otherwise.
Note
Because this is a static method on a class, the Python language interface for libSBML will contain two variants. One will be the expected, normal static method on the class (i.e., a regular methodName), and the other will be a standalone top-level function with the name ClassName_methodName(). This is merely an artifact of how the language interfaces are created in libSBML. The methods are functionally identical.
def libsbml.SBO_isLogicalFramework (   term)

Returns True if the given term identifier comes from the stated branch of SBO.

SBO_isLogicalFramework(long  term)   bool
Returns
True if term is-a SBO 'logical framework', False otherwise.
Note
Because this is a static method on a class, the Python language interface for libSBML will contain two variants. One will be the expected, normal static method on the class (i.e., a regular methodName), and the other will be a standalone top-level function with the name ClassName_methodName(). This is merely an artifact of how the language interfaces are created in libSBML. The methods are functionally identical.
def libsbml.SBO_isMaterialEntity (   term)

Returns True if the given term identifier comes from the stated branch of SBO.

SBO_isMaterialEntity(long  term)   bool
Returns
True if term is-a SBO 'material entity', False otherwise.
Note
Because this is a static method on a class, the Python language interface for libSBML will contain two variants. One will be the expected, normal static method on the class (i.e., a regular methodName), and the other will be a standalone top-level function with the name ClassName_methodName(). This is merely an artifact of how the language interfaces are created in libSBML. The methods are functionally identical.
def libsbml.SBO_isMathematicalExpression (   term)

Returns True if the given term identifier comes from the stated branch of SBO.

SBO_isMathematicalExpression(long  term)   bool
Returns
True if term is-a SBO 'mathematical expression', False otherwise.
Note
Because this is a static method on a class, the Python language interface for libSBML will contain two variants. One will be the expected, normal static method on the class (i.e., a regular methodName), and the other will be a standalone top-level function with the name ClassName_methodName(). This is merely an artifact of how the language interfaces are created in libSBML. The methods are functionally identical.
def libsbml.SBO_isMetadataRepresentation (   term)

Returns True if the given term identifier comes from the stated branch of SBO.

SBO_isMetadataRepresentation(long  term)   bool
Returns
True if term is-a SBO 'metadata representation', False otherwise.
Note
Because this is a static method on a class, the Python language interface for libSBML will contain two variants. One will be the expected, normal static method on the class (i.e., a regular methodName), and the other will be a standalone top-level function with the name ClassName_methodName(). This is merely an artifact of how the language interfaces are created in libSBML. The methods are functionally identical.
def libsbml.SBO_isModellingFramework (   term)

Returns True if the given term identifier comes from the stated branch of SBO.

SBO_isModellingFramework(long  term)   bool
Returns
True if term is-a SBO 'modeling framework', False otherwise.
Note
Because this is a static method on a class, the Python language interface for libSBML will contain two variants. One will be the expected, normal static method on the class (i.e., a regular methodName), and the other will be a standalone top-level function with the name ClassName_methodName(). This is merely an artifact of how the language interfaces are created in libSBML. The methods are functionally identical.
def libsbml.SBO_isModifier (   term)

Returns True if the given term identifier comes from the stated branch of SBO.

SBO_isModifier(long  term)   bool
Returns
True if term is-a SBO 'modifier', False otherwise.
Note
Because this is a static method on a class, the Python language interface for libSBML will contain two variants. One will be the expected, normal static method on the class (i.e., a regular methodName), and the other will be a standalone top-level function with the name ClassName_methodName(). This is merely an artifact of how the language interfaces are created in libSBML. The methods are functionally identical.
def libsbml.SBO_isObselete (   term)

Predicate for checking whether the given term is obsolete.

SBO_isObselete(long  term)   bool
Returns
True if term is-a SBO 'obsolete' term, False otherwise.
Note
Because this is a static method on a class, the Python language interface for libSBML will contain two variants. One will be the expected, normal static method on the class (i.e., a regular methodName), and the other will be a standalone top-level function with the name ClassName_methodName(). This is merely an artifact of how the language interfaces are created in libSBML. The methods are functionally identical.
def libsbml.SBO_isOccurringEntityRepresentation (   term)

Returns True if the given term identifier comes from the stated branch of SBO.

SBO_isOccurringEntityRepresentation(long  term)   bool
Returns
True if term is-a SBO 'occurring entity representation', False otherwise.
Note
Because this is a static method on a class, the Python language interface for libSBML will contain two variants. One will be the expected, normal static method on the class (i.e., a regular methodName), and the other will be a standalone top-level function with the name ClassName_methodName(). This is merely an artifact of how the language interfaces are created in libSBML. The methods are functionally identical.
def libsbml.SBO_isParticipant (   term)

Returns True if the given term identifier comes from the stated branch of SBO.

SBO_isParticipant(long  term)   bool
Returns
True if term is-a SBO 'participant', False otherwise.
Note
Because this is a static method on a class, the Python language interface for libSBML will contain two variants. One will be the expected, normal static method on the class (i.e., a regular methodName), and the other will be a standalone top-level function with the name ClassName_methodName(). This is merely an artifact of how the language interfaces are created in libSBML. The methods are functionally identical.
def libsbml.SBO_isParticipantRole (   term)

Returns True if the given term identifier comes from the stated branch of SBO.

SBO_isParticipantRole(long  term)   bool
Returns
True if term is-a SBO 'participant role', False otherwise.
Note
Because this is a static method on a class, the Python language interface for libSBML will contain two variants. One will be the expected, normal static method on the class (i.e., a regular methodName), and the other will be a standalone top-level function with the name ClassName_methodName(). This is merely an artifact of how the language interfaces are created in libSBML. The methods are functionally identical.
def libsbml.SBO_isPhysicalEntityRepresentation (   term)

Returns True if the given term identifier comes from the stated branch of SBO.

SBO_isPhysicalEntityRepresentation(long  term)   bool
Returns
True if term is-a SBO 'physical entity representation', False otherwise.
Note
Because this is a static method on a class, the Python language interface for libSBML will contain two variants. One will be the expected, normal static method on the class (i.e., a regular methodName), and the other will be a standalone top-level function with the name ClassName_methodName(). This is merely an artifact of how the language interfaces are created in libSBML. The methods are functionally identical.
def libsbml.SBO_isPhysicalParticipant (   term)

Returns True if the given term identifier comes from the stated branch of SBO.

SBO_isPhysicalParticipant(long  term)   bool
Returns
True if term is-a SBO 'physical participant, False otherwise.
Note
Because this is a static method on a class, the Python language interface for libSBML will contain two variants. One will be the expected, normal static method on the class (i.e., a regular methodName), and the other will be a standalone top-level function with the name ClassName_methodName(). This is merely an artifact of how the language interfaces are created in libSBML. The methods are functionally identical.
def libsbml.SBO_isProduct (   term)

Returns True if the given term identifier comes from the stated branch of SBO.

SBO_isProduct(long  term)   bool
Returns
True if term is-a SBO 'product', False otherwise.
Note
Because this is a static method on a class, the Python language interface for libSBML will contain two variants. One will be the expected, normal static method on the class (i.e., a regular methodName), and the other will be a standalone top-level function with the name ClassName_methodName(). This is merely an artifact of how the language interfaces are created in libSBML. The methods are functionally identical.
def libsbml.SBO_isQuantitativeParameter (   term)

Returns True if the given term identifier comes from the stated branch of SBO.

SBO_isQuantitativeParameter(long  term)   bool
Note
The 'quantitative parameter' SBO term is now known as 'systems description parameter'.
Returns
True if term is-a SBO 'quantiative parameter', False otherwise.
Note
Because this is a static method on a class, the Python language interface for libSBML will contain two variants. One will be the expected, normal static method on the class (i.e., a regular methodName), and the other will be a standalone top-level function with the name ClassName_methodName(). This is merely an artifact of how the language interfaces are created in libSBML. The methods are functionally identical.
def libsbml.SBO_isQuantitativeSystemsDescriptionParameter (   term)

Returns True if the given term identifier comes from the stated branch of SBO.

SBO_isQuantitativeSystemsDescriptionParameter(long  term)   bool
Returns
True if term is-a SBO 'quantiative systems description parameter', False otherwise.
Note
Because this is a static method on a class, the Python language interface for libSBML will contain two variants. One will be the expected, normal static method on the class (i.e., a regular methodName), and the other will be a standalone top-level function with the name ClassName_methodName(). This is merely an artifact of how the language interfaces are created in libSBML. The methods are functionally identical.
def libsbml.SBO_isRateLaw (   term)

Returns True if the given term identifier comes from the stated branch of SBO.

SBO_isRateLaw(long  term)   bool
Returns
True if term is-a SBO 'rate law', False otherwise.
Note
Because this is a static method on a class, the Python language interface for libSBML will contain two variants. One will be the expected, normal static method on the class (i.e., a regular methodName), and the other will be a standalone top-level function with the name ClassName_methodName(). This is merely an artifact of how the language interfaces are created in libSBML. The methods are functionally identical.
def libsbml.SBO_isReactant (   term)

Returns True if the given term identifier comes from the stated branch of SBO.

SBO_isReactant(long  term)   bool
Returns
True if term is-a SBO 'reactant', False otherwise.
Note
Because this is a static method on a class, the Python language interface for libSBML will contain two variants. One will be the expected, normal static method on the class (i.e., a regular methodName), and the other will be a standalone top-level function with the name ClassName_methodName(). This is merely an artifact of how the language interfaces are created in libSBML. The methods are functionally identical.
def libsbml.SBO_isSteadyStateExpression (   term)

Returns True if the given term identifier comes from the stated branch of SBO.

SBO_isSteadyStateExpression(long  term)   bool
Returns
True if term is-a SBO 'steady state expression', False otherwise.
Note
Because this is a static method on a class, the Python language interface for libSBML will contain two variants. One will be the expected, normal static method on the class (i.e., a regular methodName), and the other will be a standalone top-level function with the name ClassName_methodName(). This is merely an artifact of how the language interfaces are created in libSBML. The methods are functionally identical.
def libsbml.SBO_isSystemsDescriptionParameter (   term)

Returns True if the given term identifier comes from the stated branch of SBO.

SBO_isSystemsDescriptionParameter(long  term)   bool
Returns
True if term is-a SBO 'systems description parameter', False otherwise.
Note
Because this is a static method on a class, the Python language interface for libSBML will contain two variants. One will be the expected, normal static method on the class (i.e., a regular methodName), and the other will be a standalone top-level function with the name ClassName_methodName(). This is merely an artifact of how the language interfaces are created in libSBML. The methods are functionally identical.
def libsbml.SBO_stringToInt (   sboTerm)

Returns the string as a correctly formatted SBO integer portion.

SBO_stringToInt(string sboTerm)   int
Returns
the given string sboTerm as an integer. If the sboTerm is not in the correct format (a zero-padded, seven digit string), -1 is returned.
Note
Because this is a static method on a class, the Python language interface for libSBML will contain two variants. One will be the expected, normal static method on the class (i.e., a regular methodName), and the other will be a standalone top-level function with the name ClassName_methodName(). This is merely an artifact of how the language interfaces are created in libSBML. The methods are functionally identical.
def libsbml.SpreadMethod_fromString (   name)
SpreadMethod_fromString(long  name)   GradientBase::SPREADMETHOD
def libsbml.SpreadMethod_toString (   method)
SpreadMethod_toString(GradientBase::SPREADMETHOD method)   string  *
def libsbml.Submodel_removeProcessingCallback (   args)
removeProcessingCallback(int index)
Submodel_removeProcessingCallback(ModelProcessingCallback cb)
def libsbml.SyntaxChecker_hasExpectedXHTMLSyntax (   xhtml,
  sbmlns = None 
)

Returns True or False depending on whether the given XMLNode object contains valid XHTML content.

hasExpectedXHTMLSyntax(XMLNode xhtml, SBMLNamespaces sbmlns)   bool
SyntaxChecker_hasExpectedXHTMLSyntax(XMLNode xhtml)   bool
The optional SBML element named 'notes', present on every major SBML component type (and in SBML Level 3, the 'message' subelement of Constraint), is intended as a place for storing optional information intended to be seen by humans. An example use of the 'notes' element would be to contain formatted user comments about the model element in which the 'notes' element is enclosed. Every object derived directly or indirectly from type SBase can have a separate value for 'notes', allowing users considerable freedom when adding comments to their models.

The format of 'notes' elements conform to the definition of XHTML 1.0. However, the content cannot be entirely free-form; it must satisfy certain requirements defined in the SBML specifications for specific SBML Levels. To help verify the formatting of 'notes' content, libSBML provides the static utility method SyntaxChecker.hasExpectedXHTMLSyntax(); this method implements a verification process that lets callers check whether the content of a given XMLNode object conforms to the SBML requirements for 'notes' and 'message' structure. Developers are urged to consult the appropriate SBML specification document for the Level and Version of their model for more in-depth explanations of using 'notes' in SBML. The SBML Level 2 and 3 specifications have considerable detail about how 'notes' element content must be structured.

An aspect of XHTML validity is that the content is declared to be in the XML namespace for XHTML 1.0. There is more than one way in which this can be done in XML. In particular, a model might not contain the declaration within the 'notes' or 'message' subelement itself, but might instead place the declaration on an enclosing element and use an XML namespace prefix within the 'notes' element to refer to it. In other words, the following is valid:

<sbml xmlns='http://www.sbml.org/sbml/level2/version3' level='2' version='3'
      xmlns:xhtml='http://www.w3.org/1999/xhtml'>
  <model>
    <notes>
      <xhtml:body>
        <xhtml:center><xhtml:h2>A Simple Mitotic Oscillator</xhtml:h2></xhtml:center>
        <xhtml:p>A minimal cascade model for the mitotic oscillator.</xhtml:p>
      </xhtml:body>
    </notes>
  ... rest of model ...
</sbml>

Contrast the above with the following, self-contained version, which places the XML namespace declaration within the <notes> element itself:

<sbml xmlns='http://www.sbml.org/sbml/level2/version3' level='2' version='3'>
  <model>
    <notes>
      <html xmlns='http://www.w3.org/1999/xhtml'>
        <head>
          <title/>
        </head>
        <body>
          <center><h2>A Simple Mitotic Oscillator</h2></center>
          <p>A minimal cascade model for the mitotic oscillator.</p>
        </body>
      </html>
    </notes>
  ... rest of model ...
</sbml>

Both of the above are valid XML. The purpose of the sbmlns argument to this method is to allow callers to check the validity of 'notes' and 'message' subelements whose XML namespace declarations have been put elsewhere in the manner illustrated above. Callers can can pass in the SBMLNamespaces object of a higher-level model component if the XMLNode object does not itself have the XML namespace declaration for XHTML 1.0.

Parameters
xhtmlthe XMLNode to be checked for conformance.
sbmlnsthe SBMLNamespaces associated with the object.
Returns
True if the XMLNode content conforms, False otherwise.
Note
Because this is a static method on a class, the Python language interface for libSBML will contain two variants. One will be the expected, normal static method on the class (i.e., a regular methodName), and the other will be a standalone top-level function with the name ClassName_methodName(). This is merely an artifact of how the language interfaces are created in libSBML. The methods are functionally identical.
Owing to the way that language interfaces are created in libSBML, this documentation may show methods that define default values for parameters with text that has the form parameter = value. This is not to be intepreted as a Python keyword argument; the use of a parameter name followed by an equals sign followed by a value is only meant to indicate a default value if the argument is not provided at all. It is not a keyword in the Python sense.
def libsbml.SyntaxChecker_isValidSBMLSId (   sid)

Returns True or False depending on whether the argument string conforms to the syntax of SBML identifiers.

SyntaxChecker_isValidSBMLSId(string sid)   bool
In SBML, identifiers that are the values of 'id' attributes on objects must conform to a data type called SId in the SBML specifications. LibSBML does not provide an explicit SId data type; it uses ordinary character strings, which is easier for applications to support. (LibSBML does, however, test for identifier validity at various times, such as when reading in models from files and data streams.)

This method provides programs with the ability to test explicitly that the identifier strings they create conform to the SBML identifier syntax.

Parameters
sidstring to be checked for conformance to SBML identifier syntax.
Returns
True if the string conforms to type SBML data type SId, False otherwise.

The identifier given by an object's 'id' attribute value is used to identify the object within the SBML model definition. Other objects can refer to the component using this identifier. The data type of 'id' is always SId or a type derived from that, such as UnitSId, depending on the object in question. All data types are defined as follows:

letter ::= 'a'..'z','A'..'Z'
digit  ::= '0'..'9'
idChar ::= letter | digit | '_'
SId    ::= ( letter | '_' ) idChar*

The equality of SId and SId-derived values in SBML is determined by an exact character sequence match; i.e., comparisons of these identifiers must be performed in a case-sensitive manner. This applies to all uses of SId, SIdRef, and derived types.

Note
Because this is a static method on a class, the Python language interface for libSBML will contain two variants. One will be the expected, normal static method on the class (i.e., a regular methodName), and the other will be a standalone top-level function with the name ClassName_methodName(). This is merely an artifact of how the language interfaces are created in libSBML. The methods are functionally identical.
See also
SyntaxChecker.isValidUnitSId()
SyntaxChecker.isValidXMLID()
def libsbml.SyntaxChecker_isValidUnitSId (   units)

Returns True or False depending on whether the argument string conforms to the syntax of SBML unit identifiers.

SyntaxChecker_isValidUnitSId(string units)   bool

In SBML, the identifiers of units (of both the predefined units and user-defined units) must conform to a data type called UnitSId in the SBML specifications. LibSBML does not provide an explicit UnitSId data type; it uses ordinary character strings, which is easier for applications to support. LibSBML does, however, test for identifier validity at various times, such as when reading in models from files and data streams.

This method provides programs with the ability to test explicitly that the identifier strings they create conform to the SBML identifier syntax.

Parameters
unitsstring to be checked for conformance to SBML unit identifier syntax.
Returns
True if the string conforms to type SBML data type UnitSId, False otherwise.
Note
The following is a summary of the definition of the SBML identifier type UnitSId, which defines the permitted syntax of identifiers. We express the syntax using an extended form of BNF notation:

letter ::= 'a'..'z','A'..'Z'
digit ::= '0'..'9'
idChar ::= letter | digit | '_'
SId ::= ( letter | '_' ) idChar*

The characters ( and ) are used for grouping, the character * "zero or more times", and the character | indicates logical "or". The equality of SBML unit identifiers is determined by an exact character sequence match; i.e., comparisons must be performed in a case-sensitive manner. In addition, there are a few conditions for the uniqueness of unit identifiers in an SBML model. Please consult the SBML specifications for the exact formulations.

Because this is a static method on a class, the Python language interface for libSBML will contain two variants. One will be the expected, normal static method on the class (i.e., a regular methodName), and the other will be a standalone top-level function with the name ClassName_methodName(). This is merely an artifact of how the language interfaces are created in libSBML. The methods are functionally identical.
See also
SyntaxChecker.isValidSBMLSId()
SyntaxChecker.isValidXMLID()
def libsbml.SyntaxChecker_isValidXMLanyURI (   uri)

Returns True or False depending on whether the uri argument string conforms to the XML data type anyURI.

SyntaxChecker_isValidXMLanyURI(string uri)   bool

Type anyURI is defined by XML Schema 1.0. It is a character string data type whose values are interpretable as URIs (Universal Resource Identifiers) as described by the W3C document RFC 3986. LibSBML does not provide an explicit XML anyURI data type; it uses ordinary character strings, which is easier for applications to support. LibSBML does, however, test for anyURI validity at various times, such as when reading in models from files and data streams.

This method provides programs with the ability to test explicitly that the strings they create conform to the XML anyURI syntax.

Parameters
uristring to be checked for conformance to the syntax of anyURI.
Returns
True if the string is a syntactically-valid value for the XML type anyURI, False otherwise.
Note
Because this is a static method on a class, the Python language interface for libSBML will contain two variants. One will be the expected, normal static method on the class (i.e., a regular methodName), and the other will be a standalone top-level function with the name ClassName_methodName(). This is merely an artifact of how the language interfaces are created in libSBML. The methods are functionally identical.
def libsbml.SyntaxChecker_isValidXMLID (   id)

Returns True or False depending on whether the argument string conforms to the XML data type ID.

SyntaxChecker_isValidXMLID(string id)   bool
The optional attribute named 'metaid', present on every major SBML component type, is for supporting metadata annotations using RDF (Resource Description Format). The attribute value has the data type XML ID, the XML identifier type, which means each 'metaid' value must be globally unique within an SBML file. The latter point is important, because the uniqueness criterion applies across any attribute with type ID anywhere in the file, not just the 'metaid' attribute used by SBML—something to be aware of if your application-specific XML content inside the 'annotation' subelement happens to use the XML ID type. Although SBML itself specifies the use of XML ID only for the 'metaid' attribute, SBML-compatible applications should be careful if they use XML ID's in XML portions of a model that are not defined by SBML, such as in the application-specific content of the 'annotation' subelement. Finally, note that LibSBML does not provide an explicit XML ID data type; it uses ordinary character strings, which is easier for applications to support.

This method provides programs with the ability to test explicitly that the identifier strings they create conform to the SBML identifier syntax.

Parameters
idstring to be checked for conformance to the syntax of XML ID.
Returns
True if the string is a syntactically-valid value for the XML type ID, False otherwise.
Note
The following is a summary of the definition of the XML 1.0 data type ID. We express the syntax using an extended form of BNF notation:

NCNameChar ::= letter | digit | '.' | '-' | '_' | ':' | CombiningChar | Extender
ID ::= ( letter | '_' | ':' ) NCNameChar*

The characters ( and ) are used for grouping, the character * means "zero or more times", and the character | indicates logical "or". The production letter consists of the basic upper and lower case alphabetic characters of the Latin alphabet along with a large number of related characters defined by Unicode 2.0; similarly, the production digit consists of the numerals 0..9 along with related Unicode 2.0 characters. The CombiningChar production is a list of characters that add such things as accents to the preceding character. (For example, the Unicode character \#x030A when combined with a produces \aa.) The Extender production is a list of characters that extend the shape of the preceding character. Please consult the XML 1.0 specification for the complete definitions of letter, digit, CombiningChar, and Extender.

Because this is a static method on a class, the Python language interface for libSBML will contain two variants. One will be the expected, normal static method on the class (i.e., a regular methodName), and the other will be a standalone top-level function with the name ClassName_methodName(). This is merely an artifact of how the language interfaces are created in libSBML. The methods are functionally identical.
See also
SyntaxChecker.isValidSBMLSId()
SyntaxChecker.isValidUnitSId()
def libsbml.TextAnchor_fromString (   str)
TextAnchor_fromString(long  str)   Text::TEXT_ANCHOR
def libsbml.TextAnchor_toString (   anchor)
TextAnchor_toString(Text::TEXT_ANCHOR anchor)   string  *
def libsbml.Transformation2D_getIdentityMatrix2D ( )

Returns a 2D identity matrix.

Transformation2D_getIdentityMatrix2D()   float  *

The matrix contains 6 float values.

def libsbml.Transformation_getIdentityMatrix ( )

Returns a 3D identity matrix.

Transformation_getIdentityMatrix()   float  *

The matrix contains 12 float values.

def libsbml.Unit_areEquivalent (   unit1,
  unit2 
)

Predicate returning True if Unit objects are equivalent.

Unit_areEquivalent(Unit unit1, Unit unit2)   bool

Two Unit objects are considered to be equivalent either if (1) both have a 'kind' attribute value of dimensionless, or (2) their 'kind', 'exponent' and (for SBML Level 2 Version 1) 'offset' attribute values are equal. (Contrast this to the method areIdentical(), which compares Unit objects with respect to all attributes, not just the 'kind' and 'exponent'.)

Parameters
unit1the first Unit object to compare.
unit2the second Unit object to compare.
Returns
True if the 'kind' and 'exponent' attributes of unit1 are identical to the kind and exponent attributes of unit2, or if the kind attributes of both are dimensionless; False otherwise.
Note
Because this is a static method on a class, the Python language interface for libSBML will contain two variants. One will be the expected, normal static method on the class (i.e., a regular methodName), and the other will be a standalone top-level function with the name ClassName_methodName(). This is merely an artifact of how the language interfaces are created in libSBML. The methods are functionally identical.
See also
Unit.areIdentical()
def libsbml.Unit_areIdentical (   unit1,
  unit2 
)

Predicate returning True if two Unit objects are identical.

Unit_areIdentical(Unit unit1, Unit unit2)   bool

Two Unit objects are considered to be identical if they match in all attributes. (Contrast this to the method areEquivalent(), which compares Unit objects only with respect to certain attributes.)

Parameters
unit1the first Unit object to compare.
unit2the second Unit object to compare.
Returns
True if all the attributes of unit1 are identical to the attributes of unit2, False otherwise.
Note
Because this is a static method on a class, the Python language interface for libSBML will contain two variants. One will be the expected, normal static method on the class (i.e., a regular methodName), and the other will be a standalone top-level function with the name ClassName_methodName(). This is merely an artifact of how the language interfaces are created in libSBML. The methods are functionally identical.
See also
Unit.areEquivalent()
def libsbml.Unit_convertToSI (   unit)

Returns a UnitDefinition object containing the given unit converted to the appropriate SI unit.

Unit_convertToSI(Unit unit)   UnitDefinition

This method exists because some units can be expressed in terms of others when the same physical dimension is involved. For example, one hertz is identical to 1 sec-1, one litre is equivalent to 1 cubic decametre, and so on.

Parameters
unitthe Unit object to convert to SI.
Returns
a UnitDefinition object containing the SI unit.
Note
Because this is a static method on a class, the Python language interface for libSBML will contain two variants. One will be the expected, normal static method on the class (i.e., a regular methodName), and the other will be a standalone top-level function with the name ClassName_methodName(). This is merely an artifact of how the language interfaces are created in libSBML. The methods are functionally identical.
See also
Unit.merge()
def libsbml.Unit_isBuiltIn (   name,
  level 
)

Predicate to test whether a given string is the name of a built-in SBML unit, depending on the SBML level, since new predefined units were added between level 2 versions 1 and 2, and then all predefined units were removed again in SBML Level 3.

Unit_isBuiltIn(string name, long  level)   bool
Parameters
namea string to be tested against the built-in unit names.
levelthe level of SBML one is checking.
Returns
True if name is one of 'substance', 'volume', or 'time' and the level is 1; or if name is one of 'substance', 'volume', 'area', 'length', or 'time' and the level is 2; False otherwise (including all values when level is 3).
Note
Because this is a static method on a class, the Python language interface for libSBML will contain two variants. One will be the expected, normal static method on the class (i.e., a regular methodName), and the other will be a standalone top-level function with the name ClassName_methodName(). This is merely an artifact of how the language interfaces are created in libSBML. The methods are functionally identical.
def libsbml.Unit_isUnitKind (   name,
  level,
  version 
)

Predicate to test whether a given string is the name of a valid base unit in SBML (such as 'gram' or 'mole').

Unit_isUnitKind(string name, long  level, long  version)   bool

This method exists because prior to SBML Level 2 Version 3, an enumeration called UnitKind was defined by SBML. This enumeration was removed in SBML Level 2 Version 3 and its values were folded into the space of values of a type called UnitSId. This method therefore has less significance in SBML Level 2 Version 3 and Level 2 Version 4, but remains for backward compatibility and support for reading models in older Versions of Level 2.

Parameters
namea string to be tested.
levela long integer representing the SBML specification Level.
versiona long integer representing the SBML specification Version.
Returns
True if name is a valid SBML UnitKind, False otherwise.
Note
The allowed unit names differ between SBML Levels 1 and 2 and again slightly between Level 2 Versions 1 and 2.
Because this is a static method on a class, the Python language interface for libSBML will contain two variants. One will be the expected, normal static method on the class (i.e., a regular methodName), and the other will be a standalone top-level function with the name ClassName_methodName(). This is merely an artifact of how the language interfaces are created in libSBML. The methods are functionally identical.
def libsbml.Unit_merge (   unit1,
  unit2 
)

Merges two Unit objects with the same 'kind' attribute value into a single Unit.

Unit_merge(Unit unit1, Unit unit2)

For example, the following,

 <unit kind='metre' exponent='2'/>
 <unit kind='metre' exponent='1'/>

would be merged to become

 <unit kind='metre' exponent='3'/>
Parameters
unit1the first Unit object; the result of the operation is left as a new version of this unit, modified in-place. Not modified if the two units have different kinds.
unit2the second Unit object to merge with the first.
Note
Because this is a static method on a class, the Python language interface for libSBML will contain two variants. One will be the expected, normal static method on the class (i.e., a regular methodName), and the other will be a standalone top-level function with the name ClassName_methodName(). This is merely an artifact of how the language interfaces are created in libSBML. The methods are functionally identical.
See also
Unit.convertToSI()
Unit.removeScale()
def libsbml.Unit_removeScale (   unit)

Manipulates the attributes of the Unit to express the unit with the value of the scale attribute reduced to zero.

Unit_removeScale(Unit unit)   int

For example, 1 millimetre can be expressed as a Unit with kind= 'metre' multiplier='1' scale='-3' exponent='1'. It can also be expressed as a Unit with kind='metre' multiplier='0.001' scale='0' exponent='1'.

Parameters
unitthe Unit object to manipulate.
Returns
integer value indicating success/failure of the function. This particular function only does one thing irrespective of user input or object state, and thus will only return a single value:
Note
Because this is a static method on a class, the Python language interface for libSBML will contain two variants. One will be the expected, normal static method on the class (i.e., a regular methodName), and the other will be a standalone top-level function with the name ClassName_methodName(). This is merely an artifact of how the language interfaces are created in libSBML. The methods are functionally identical.
See also
Unit.convertToSI()
Unit.merge()
def libsbml.UnitDefinition_areEquivalent (   ud1,
  ud2 
)

Predicate returning True if two UnitDefinition objects are equivalent.

UnitDefinition_areEquivalent(UnitDefinition ud1, UnitDefinition ud2)   bool

For the purposes of performing this comparison, two UnitDefinition objects are considered equivalent when they contain equivalent list of Unit objects. Unit objects are in turn considered equivalent if they satisfy the predicate Unit.areEquivalent(). The predicate tests a subset of the objects's attributes.

Parameters
ud1the first UnitDefinition object to compare.
ud2the second UnitDefinition object to compare.
Returns
True if all the Unit objects in ud1 are equivalent to the Unit objects in ud2, False otherwise.
Note
Because this is a static method on a class, the Python language interface for libSBML will contain two variants. One will be the expected, normal static method on the class (i.e., a regular methodName), and the other will be a standalone top-level function with the name ClassName_methodName(). This is merely an artifact of how the language interfaces are created in libSBML. The methods are functionally identical.
See also
UnitDefinition.areIdentical()
Unit.areEquivalent()
def libsbml.UnitDefinition_areIdentical (   ud1,
  ud2 
)

Predicate returning True if two UnitDefinition objects are identical.

UnitDefinition_areIdentical(UnitDefinition ud1, UnitDefinition ud2)   bool

For the purposes of performing this comparison, two UnitDefinition objects are considered identical when they contain identical lists of Unit objects. Pairs of Unit objects in the lists are in turn considered identical if they satisfy the predicate Unit.areIdentical(). The predicate compares every attribute of the Unit objects.

Parameters
ud1the first UnitDefinition object to compare.
ud2the second UnitDefinition object to compare.
Returns
True if all the Unit objects in ud1 are identical to the Unit objects of ud2, False otherwise.
Note
Because this is a static method on a class, the Python language interface for libSBML will contain two variants. One will be the expected, normal static method on the class (i.e., a regular methodName), and the other will be a standalone top-level function with the name ClassName_methodName(). This is merely an artifact of how the language interfaces are created in libSBML. The methods are functionally identical.
See also
UnitDefinition.areEquivalent()
Unit.areIdentical()
def libsbml.UnitDefinition_combine (   ud1,
  ud2 
)

Combines two UnitDefinition objects into a single UnitDefinition.

UnitDefinition_combine(UnitDefinition ud1, UnitDefinition ud2)   UnitDefinition

This takes UnitDefinition objects ud1 and ud2, and creates a UnitDefinition object that expresses the product of the units of ud1 and ud2.

Parameters
ud1the first UnitDefinition object.
ud2the second UnitDefinition object.
Returns
a UnitDefinition which represents the product of the units of the two argument UnitDefinitions.
Note
Because this is a static method on a class, the Python language interface for libSBML will contain two variants. One will be the expected, normal static method on the class (i.e., a regular methodName), and the other will be a standalone top-level function with the name ClassName_methodName(). This is merely an artifact of how the language interfaces are created in libSBML. The methods are functionally identical.
def libsbml.UnitDefinition_convertToSI (   ud)

Convert a given UnitDefinition into a new UnitDefinition object that uses SI units.

UnitDefinition_convertToSI(UnitDefinition ud)   UnitDefinition
Parameters
udthe UnitDefinition object to convert to SI.
Returns
a new UnitDefinition object representing the results of the conversion.
Note
Because this is a static method on a class, the Python language interface for libSBML will contain two variants. One will be the expected, normal static method on the class (i.e., a regular methodName), and the other will be a standalone top-level function with the name ClassName_methodName(). This is merely an artifact of how the language interfaces are created in libSBML. The methods are functionally identical.
def libsbml.UnitDefinition_divide (   ud1,
  ud2 
)

Combines two UnitDefinition objects into a single UnitDefinition as a division.

UnitDefinition_divide(UnitDefinition ud1, UnitDefinition ud2)   UnitDefinition

This takes UnitDefinition objects ud1 and ud2, and creates a UnitDefinition object that expresses the division of the units of ud1 and ud2.

Parameters
ud1the first UnitDefinition object.
ud2the second UnitDefinition object.
Returns
a UnitDefinition which represents the division of the units of the two argument UnitDefinitions.
Note
Because this is a static method on a class, the Python language interface for libSBML will contain two variants. One will be the expected, normal static method on the class (i.e., a regular methodName), and the other will be a standalone top-level function with the name ClassName_methodName(). This is merely an artifact of how the language interfaces are created in libSBML. The methods are functionally identical.
def libsbml.UnitDefinition_printUnits (   ud,
  compact = False 
)

Expresses the given definition in a plain-text form.

printUnits(UnitDefinition ud, bool compact)   string
UnitDefinition_printUnits(UnitDefinition ud)   string

For example, UnitDefinition.printUnits() applied to

 <unitDefinition>
  <listOfUnits>
    <unit kind='metre' exponent='1'/>
    <unit kind='second' exponent='-2'/>
  </listOfUnits>
 <unitDefinition>

will return the string 'metre (exponent = 1, multiplier = 1, scale = 0) second (exponent = -2, multiplier = 1, scale = 0)' or, if the optional parameter compact is given the value True, the string '(1 metre)^1 (1 second)^-2'. This method may be useful for printing unit information to human users, or in debugging software, or other situations.

Parameters
udthe UnitDefinition object.
compactboolean indicating whether the compact form should be used (defaults to false).
Returns
a string expressing the unit definition defined by the given UnitDefinition object ud.
Note
Because this is a static method on a class, the Python language interface for libSBML will contain two variants. One will be the expected, normal static method on the class (i.e., a regular methodName), and the other will be a standalone top-level function with the name ClassName_methodName(). This is merely an artifact of how the language interfaces are created in libSBML. The methods are functionally identical.
Owing to the way that language interfaces are created in libSBML, this documentation may show methods that define default values for parameters with text that has the form parameter = value. This is not to be intepreted as a Python keyword argument; the use of a parameter name followed by an equals sign followed by a value is only meant to indicate a default value if the argument is not provided at all. It is not a keyword in the Python sense.
def libsbml.UnitDefinition_reorder (   ud)

Alphabetically orders the Unit objects within the ListOfUnits of a UnitDefinition.

UnitDefinition_reorder(UnitDefinition ud)
Parameters
udthe UnitDefinition object whose units are to be reordered.
Note
Because this is a static method on a class, the Python language interface for libSBML will contain two variants. One will be the expected, normal static method on the class (i.e., a regular methodName), and the other will be a standalone top-level function with the name ClassName_methodName(). This is merely an artifact of how the language interfaces are created in libSBML. The methods are functionally identical.
def libsbml.UnitDefinition_simplify (   ud)

Simplifies the UnitDefinition such that any given kind of Unit object occurs only once in the ListOfUnits.

UnitDefinition_simplify(UnitDefinition ud)

For example, the following definition,

 <unitDefinition>
  <listOfUnits>
    <unit kind='metre' exponent='1'/>
    <unit kind='metre' exponent='2'/>
  </listOfUnits>
 <unitDefinition>

will be simplified to

 <unitDefinition>
   <listOfUnits>
     <unit kind='metre' exponent='3'/>
   </listOfUnits>
 <unitDefinition>
Parameters
udthe UnitDefinition object to be simplified.
Note
Because this is a static method on a class, the Python language interface for libSBML will contain two variants. One will be the expected, normal static method on the class (i.e., a regular methodName), and the other will be a standalone top-level function with the name ClassName_methodName(). This is merely an artifact of how the language interfaces are created in libSBML. The methods are functionally identical.
def libsbml.UnitKind_equals (   uk1,
  uk2 
)

Tests for logical equality between two given UNIT_KIND_ code values.

UnitKind_equals(long uk1, long uk2)   int

This function behaves exactly like C's == operator, except for the following two cases:

In the two cases above, C equality comparison would yield 0 (false) (because each of the above is a distinct enumeration value), but this function returns True.

Parameters
uk1a UNIT_KIND_ value.
uk2a second UNIT_KIND_ value to compare to uk1.
Returns
1 (true) if uk1 is logically equivalent to uk2, 0 (false) otherwise.
Note
For more information about the libSBML unit codes, please refer to the class documentation for Unit.
def libsbml.UnitKind_forName (   name)

Converts a text string naming a kind of unit to its corresponding libSBML UNIT_KIND_ constant/enumeration value.

UnitKind_forName(long  name)   long
Parameters
namea string, the name of a predefined base unit in SBML.
Returns
a value the set of UNIT_KIND_ codes defined in class libsbml, corresponding to the string name (determined in a case-insensitive manner).
Note
For more information about the libSBML unit codes, please refer to the class documentation for Unit.
def libsbml.UnitKind_isValidUnitKindString (   str,
  level,
  version 
)

Predicate for testing whether a given string corresponds to a predefined libSBML unit code.

UnitKind_isValidUnitKindString(long  str, long  level, long  version)   int
Parameters
stra text string naming a base unit defined by SBML.
levelthe Level of SBML.
versionthe Version within the Level of SBML.
Returns
1 (true) if string is the name of a valid UNIT_KIND_ value, 0 (false) otherwise.
Note
For more information about the libSBML unit codes, please refer to the class documentation for Unit.
def libsbml.UnitKind_toString (   uk)

Converts a unit code to a text string equivalent.

UnitKind_toString(long uk)   string  *
Parameters
ukavalue from the set of UNIT_KIND_ codes defined in the class libsbml
Returns
the name corresponding to the given unit code.
Note
For more information about the libSBML unit codes, please refer to the class documentation for Unit.
Warning
The string returned is a static data value. The caller does not own the returned string and is therefore not allowed to modify it.
def libsbml.writeMathMLToString (   node)

Writes the given ASTNode (and its children) to a string as MathML, and returns the string.

writeMathMLToString(ASTNode node)   string
Parameters
nodethe root of an AST to write out to the stream.
Returns
a string containing the written-out MathML representation of the given AST.
Note
The string is owned by the caller and should be freed (with free()) when no longer needed. None is returned if the given argument is None.
def libsbml.writeMathMLWithNamespaceToString (   node,
  sbmlns 
)

Writes the given AST node (and its children) to a string as MathML, and returns the string.

writeMathMLWithNamespaceToString(ASTNode node, SBMLNamespaces sbmlns)   string
Parameters
nodethe root of an AST to write out to the stream.
sbmlnsthe SBML namespace to be used
Returns
a string containing the written-out MathML representation of the given AST.
Note
The string is owned by the caller and should be freed (with free()) when no longer needed. None is returned if the given argument is None.
def libsbml.writeSBML (   d,
  filename 
)

Writes the given SBML document d to the file named by filename.

writeSBML(SBMLDocument d, long  filename)   int

This convenience function is functionally equivalent to:

SBMLWriter_writeSBML(SBMLWriter_create(), d, filename);

If the given filename ends with the suffix ".gz" (for example, "myfile.xml.gz"), libSBML assumes the caller wants the file to be written compressed in gzip format. Similarly, if the given filename ends with ".zip" or ".bz2", libSBML assumes the caller wants the file to be compressed in zip or bzip2 format (respectively). Files whose names lack these suffixes will be written uncompressed. Special considerations for the zip format: If the given filename ends with ".zip", the file placed in the zip archive will have the suffix ".xml" or ".sbml". For example, the file in the zip archive will be named "test.xml" if the given filename is "test.xml.zip" or "test.zip". Similarly, the filename in the archive will be "test.sbml" if the given filename is "test.sbml.zip".
Parameters
dthe SBMLDocument object to be written out in XML format.
filenamea string giving the path to a file where the XML content is to be written.
Returns
1 (true) on success and 0 (false) if filename could not be written. Some possible reasons for failure include (a) being unable to open the file, and (b) using a filename that indicates a compressed SBML file (i.e., a filename ending in ".zip" or similar) when the compression functionality has not been enabled in the underlying copy of libSBML.
See also
SBMLWriter.hasZlib()
SBMLWriter.hasBzip2()
def libsbml.writeSBMLToFile (   d,
  filename 
)

Writes the given SBML document d to the file filename.

writeSBMLToFile(SBMLDocument d, long  filename)   int

This convenience function is functionally equivalent to:

SBMLWriter_writeSBMLToFile(SBMLWriter_create(), d, filename);

but that does not require the caller to create an SBMLWriter object first.

If the given filename ends with the suffix ".gz" (for example, "myfile.xml.gz"), libSBML assumes the caller wants the file to be written compressed in gzip format. Similarly, if the given filename ends with ".zip" or ".bz2", libSBML assumes the caller wants the file to be compressed in zip or bzip2 format (respectively). Files whose names lack these suffixes will be written uncompressed. Special considerations for the zip format: If the given filename ends with ".zip", the file placed in the zip archive will have the suffix ".xml" or ".sbml". For example, the file in the zip archive will be named "test.xml" if the given filename is "test.xml.zip" or "test.zip". Similarly, the filename in the archive will be "test.sbml" if the given filename is "test.sbml.zip".
Parameters
dan SBMLDocument object to be written out in XML format.
filenamea string giving the path to a file where the XML content is to be written.
Returns
1 (true) on success and 0 (false) if filename could not be written. Some possible reasons for failure include (a) being unable to open the file, and (b) using a filename that indicates a compressed SBML file (i.e., a filename ending in ".zip" or similar) when the compression functionality has not been enabled in the underlying copy of libSBML.
See also
SBMLWriter.hasZlib()
SBMLWriter.hasBzip2()
def libsbml.writeSBMLToString (   d)

Writes the given SBML document d to an in-memory string and returns a pointer to it.

writeSBMLToString(SBMLDocument d)   string

The string is owned by the caller and should be freed (with free()) when no longer needed. This convenience function is functionally equivalent to:

SBMLWriter_writeSBMLToString(SBMLWriter_create(), d);

but does not require the caller to create an SBMLWriter object first.

Parameters
dan SBMLDocument object to be written out in XML format.
Returns
the string on success and None if one of the underlying parser components fail.
def libsbml.XMLError_getStandardMessage (   code)

Returns a copy of the message string associated with the given predefined XMLError code.

XMLError_getStandardMessage(int  code)   string
Parameters
codethe error code whose message is sought; it must be a predefined value from the set of predefined error identifiers.
def libsbml.XMLNode_convertStringToXMLNode (   xmlstr,
  xmlns = None 
)

Returns an XMLNode which is derived from a string containing XML content.

convertStringToXMLNode(string xmlstr, XMLNamespaces xmlns)   XMLNode
XMLNode_convertStringToXMLNode(string xmlstr)   XMLNode

The XML namespace must be defined using argument xmlns if the corresponding XML namespace attribute is not part of the string of the first argument.

Parameters
xmlstrstring to be converted to a XML node.
xmlnsXMLNamespaces the namespaces to set (default value is None).
Note
The caller owns the returned XMLNode and is reponsible for deleting it. The returned XMLNode object is a dummy root (container) XMLNode if the top-level element in the given XML string is NOT <html>, <body>, <annotation>, or <notes>. In the dummy root node, each top-level element in the given XML string is contained as a child XMLNode. XMLToken.isEOF() can be used to identify if the returned XMLNode object is a dummy node.
Returns
a XMLNode which is converted from string xmlstr. If the conversion failed, this method returns None.
Note
Owing to the way that language interfaces are created in libSBML, this documentation may show methods that define default values for parameters with text that has the form parameter = value. This is not to be intepreted as a Python keyword argument; the use of a parameter name followed by an equals sign followed by a value is only meant to indicate a default value if the argument is not provided at all. It is not a keyword in the Python sense.
def libsbml.XMLNode_convertXMLNodeToString (   node)

Returns a string representation of a given XMLNode.

XMLNode_convertXMLNodeToString(XMLNode node)   string
Parameters
nodethe XMLNode to be represented as a string.
Returns
a string-form representation of node.
def libsbml.XMLOutputStream_getLibraryName ( )
XMLOutputStream_getLibraryName()   string
 
Returns
the name of the library to be used in comments ('libSBML' by default).
def libsbml.XMLOutputStream_getLibraryVersion ( )
XMLOutputStream_getLibraryVersion()   string
 
Returns
a string representing the version of the library writing the output. This is the value of getLibSBMLDottedVersion() by default.
def libsbml.XMLOutputStream_getWriteComment ( )
XMLOutputStream_getWriteComment()   bool
 
Returns
a boolean, whether the output stream will write an XML comment at the top of the file. (Enabled by default.)
def libsbml.XMLOutputStream_getWriteTimestamp ( )
XMLOutputStream_getWriteTimestamp()   bool
 
Returns
a boolean, whether the output stream will write an XML comment with a timestamp at the top of the file. (Enabled by default.)
def libsbml.XMLOutputStream_setLibraryName (   libraryName)

sets the name of the library writing the XML

Parameters
libraryNamethe name of the library to be used in comments.
XMLOutputStream_setLibraryName(string libraryName)
 
def libsbml.XMLOutputStream_setLibraryVersion (   libraryVersion)

sets the name of the library writing the output

Parameters
libraryVersionthe version information as string.
XMLOutputStream_setLibraryVersion(string libraryVersion)
 
def libsbml.XMLOutputStream_setWriteComment (   writeComment)
XMLOutputStream_setWriteComment(bool writeComment)
sets a flag, whether the output stream will write an XML
comment at the top of the file. (Enabled by default.)
Parameters
writeCommentthe flag.
def libsbml.XMLOutputStream_setWriteTimestamp (   writeTimestamp)
XMLOutputStream_setWriteTimestamp(bool writeTimestamp)
sets a flag, whether the output stream will write an XML
comment with a timestamp at the top of the file. (Enabled by default.)
Parameters
writeTimestampthe flag.

Variable Documentation

libsbml.ALLOWED_CHILDREN_ANY = _libsbml.ALLOWED_CHILDREN_ANY

Extended math added in L3V2.

libsbml.ALLOWED_CHILDREN_ATLEAST = _libsbml.ALLOWED_CHILDREN_ATLEAST

Extended math added by the 'distrib' package.

libsbml.ALLOWED_CHILDREN_EXACTLY = _libsbml.ALLOWED_CHILDREN_EXACTLY

Extended math.

libsbml.ALLOWED_CHILDREN_UNKNOWN = _libsbml.ALLOWED_CHILDREN_UNKNOWN

Unknown node: will not produce any MathML.

libsbml.AllowedAttributesOnAlgRule = _libsbml.AllowedAttributesOnAlgRule

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.AllowedAttributesOnAssignRule = _libsbml.AllowedAttributesOnAssignRule

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.AllowedAttributesOnCompartment = _libsbml.AllowedAttributesOnCompartment

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.AllowedAttributesOnConstraint = _libsbml.AllowedAttributesOnConstraint

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.AllowedAttributesOnDelay = _libsbml.AllowedAttributesOnDelay

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.AllowedAttributesOnEvent = _libsbml.AllowedAttributesOnEvent

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.AllowedAttributesOnEventAssignment = _libsbml.AllowedAttributesOnEventAssignment

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.AllowedAttributesOnFunc = _libsbml.AllowedAttributesOnFunc

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.AllowedAttributesOnInitialAssign = _libsbml.AllowedAttributesOnInitialAssign

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.AllowedAttributesOnKineticLaw = _libsbml.AllowedAttributesOnKineticLaw

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.AllowedAttributesOnListOfComps = _libsbml.AllowedAttributesOnListOfComps

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.AllowedAttributesOnListOfConstraints = _libsbml.AllowedAttributesOnListOfConstraints

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.AllowedAttributesOnListOfEventAssign = _libsbml.AllowedAttributesOnListOfEventAssign

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.AllowedAttributesOnListOfEvents = _libsbml.AllowedAttributesOnListOfEvents

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.AllowedAttributesOnListOfFuncs = _libsbml.AllowedAttributesOnListOfFuncs

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.AllowedAttributesOnListOfInitAssign = _libsbml.AllowedAttributesOnListOfInitAssign

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.AllowedAttributesOnListOfLocalParam = _libsbml.AllowedAttributesOnListOfLocalParam

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.AllowedAttributesOnListOfMods = _libsbml.AllowedAttributesOnListOfMods

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.AllowedAttributesOnListOfParams = _libsbml.AllowedAttributesOnListOfParams

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.AllowedAttributesOnListOfReactions = _libsbml.AllowedAttributesOnListOfReactions

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.AllowedAttributesOnListOfRules = _libsbml.AllowedAttributesOnListOfRules

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.AllowedAttributesOnListOfSpecies = _libsbml.AllowedAttributesOnListOfSpecies

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.AllowedAttributesOnListOfSpeciesRef = _libsbml.AllowedAttributesOnListOfSpeciesRef

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.AllowedAttributesOnListOfUnitDefs = _libsbml.AllowedAttributesOnListOfUnitDefs

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.AllowedAttributesOnListOfUnits = _libsbml.AllowedAttributesOnListOfUnits

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.AllowedAttributesOnLocalParameter = _libsbml.AllowedAttributesOnLocalParameter

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.AllowedAttributesOnModel = _libsbml.AllowedAttributesOnModel

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.AllowedAttributesOnModifier = _libsbml.AllowedAttributesOnModifier

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.AllowedAttributesOnParameter = _libsbml.AllowedAttributesOnParameter

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.AllowedAttributesOnPriority = _libsbml.AllowedAttributesOnPriority

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.AllowedAttributesOnRateRule = _libsbml.AllowedAttributesOnRateRule

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.AllowedAttributesOnReaction = _libsbml.AllowedAttributesOnReaction

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.AllowedAttributesOnSBML = _libsbml.AllowedAttributesOnSBML

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.AllowedAttributesOnSpecies = _libsbml.AllowedAttributesOnSpecies

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.AllowedAttributesOnSpeciesReference = _libsbml.AllowedAttributesOnSpeciesReference

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.AllowedAttributesOnTrigger = _libsbml.AllowedAttributesOnTrigger

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.AllowedAttributesOnUnit = _libsbml.AllowedAttributesOnUnit

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.AllowedAttributesOnUnitDefinition = _libsbml.AllowedAttributesOnUnitDefinition

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.AND_ASSOCIATION = _libsbml.AND_ASSOCIATION

fbc One of the possible Association types.

The Association class is not part of the official SBML Level 3 Flux Balance Constraints specification, but is instead a proposed future development of the package. If adopted, it would be a child of a GeneAssociation that would describe a single 'and' or 'or' relationship between two or more genes or other associations.

The present code is one of the possible Association types for this proposed SBML Level 3 Flux Balance Constraints (“fbc”) package future development.

libsbml.AnnotationNotElement = _libsbml.AnnotationNotElement

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.AnnotationNotesNotAllowedLevel1 = _libsbml.AnnotationNotesNotAllowedLevel1

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.ApplyCiMustBeModelComponent = _libsbml.ApplyCiMustBeModelComponent

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.ApplyCiMustBeUserFunction = _libsbml.ApplyCiMustBeUserFunction

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.ArgsToEqNeedSameType = _libsbml.ArgsToEqNeedSameType

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.AssignmentToConstantEntity = _libsbml.AssignmentToConstantEntity

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.AssignRuleCompartmentMismatch = _libsbml.AssignRuleCompartmentMismatch

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.AssignRuleParameterMismatch = _libsbml.AssignRuleParameterMismatch

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.AssignRuleSpeciesMismatch = _libsbml.AssignRuleSpeciesMismatch

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.AssignRuleStoichiometryMismatch = _libsbml.AssignRuleStoichiometryMismatch

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.AST_CONSTANT_E = _libsbml.AST_CONSTANT_E

One of the possible ASTNode types.

Each ASTNode has a type whose value is one of the elements of this enumeration.

libsbml.AST_CONSTANT_FALSE = _libsbml.AST_CONSTANT_FALSE

One of the possible ASTNode types.

Each ASTNode has a type whose value is one of the elements of this enumeration.

libsbml.AST_CONSTANT_PI = _libsbml.AST_CONSTANT_PI

One of the possible ASTNode types.

Each ASTNode has a type whose value is one of the elements of this enumeration.

libsbml.AST_CONSTANT_TRUE = _libsbml.AST_CONSTANT_TRUE

One of the possible ASTNode types.

Each ASTNode has a type whose value is one of the elements of this enumeration.

libsbml.AST_CSYMBOL_FUNCTION = _libsbml.AST_CSYMBOL_FUNCTION

Enumeration marker for the possible ASTNode types.

libsbml.AST_DISTRIB_FUNCTION_BERNOULLI = _libsbml.AST_DISTRIB_FUNCTION_BERNOULLI

Enumeration marker for the possible ASTNode types.

libsbml.AST_DISTRIB_FUNCTION_BINOMIAL = _libsbml.AST_DISTRIB_FUNCTION_BINOMIAL

Enumeration marker for the possible ASTNode types.

libsbml.AST_DISTRIB_FUNCTION_CAUCHY = _libsbml.AST_DISTRIB_FUNCTION_CAUCHY

Enumeration marker for the possible ASTNode types.

libsbml.AST_DISTRIB_FUNCTION_CHISQUARE = _libsbml.AST_DISTRIB_FUNCTION_CHISQUARE

Enumeration marker for the possible ASTNode types.

libsbml.AST_DISTRIB_FUNCTION_EXPONENTIAL = _libsbml.AST_DISTRIB_FUNCTION_EXPONENTIAL

Enumeration marker for the possible ASTNode types.

libsbml.AST_DISTRIB_FUNCTION_GAMMA = _libsbml.AST_DISTRIB_FUNCTION_GAMMA

Enumeration marker for the possible ASTNode types.

libsbml.AST_DISTRIB_FUNCTION_LAPLACE = _libsbml.AST_DISTRIB_FUNCTION_LAPLACE

Enumeration marker for the possible ASTNode types.

libsbml.AST_DISTRIB_FUNCTION_LOGNORMAL = _libsbml.AST_DISTRIB_FUNCTION_LOGNORMAL

Enumeration marker for the possible ASTNode types.

libsbml.AST_DISTRIB_FUNCTION_NORMAL = _libsbml.AST_DISTRIB_FUNCTION_NORMAL

Enumeration marker for the possible ASTNode types.

libsbml.AST_DISTRIB_FUNCTION_POISSON = _libsbml.AST_DISTRIB_FUNCTION_POISSON

Enumeration marker for the possible ASTNode types.

libsbml.AST_DISTRIB_FUNCTION_RAYLEIGH = _libsbml.AST_DISTRIB_FUNCTION_RAYLEIGH

Enumeration marker for the possible ASTNode types.

libsbml.AST_DISTRIB_FUNCTION_UNIFORM = _libsbml.AST_DISTRIB_FUNCTION_UNIFORM

Enumeration marker for the possible ASTNode types.

libsbml.AST_DIVIDE = _libsbml.AST_DIVIDE

One of the possible ASTNode types.

Each ASTNode has a type whose value is one of the elements of this enumeration.

libsbml.AST_END_OF_CORE = _libsbml.AST_END_OF_CORE

One of the possible ASTNode types.

Marker for the end of values in SBML Core.

libsbml.AST_FUNCTION = _libsbml.AST_FUNCTION

One of the possible ASTNode types.

Each ASTNode has a type whose value is one of the elements of this enumeration.

libsbml.AST_FUNCTION_ABS = _libsbml.AST_FUNCTION_ABS

One of the possible ASTNode types.

Each ASTNode has a type whose value is one of the elements of this enumeration.

libsbml.AST_FUNCTION_ARCCOS = _libsbml.AST_FUNCTION_ARCCOS

One of the possible ASTNode types.

Each ASTNode has a type whose value is one of the elements of this enumeration.

libsbml.AST_FUNCTION_ARCCOSH = _libsbml.AST_FUNCTION_ARCCOSH

One of the possible ASTNode types.

Each ASTNode has a type whose value is one of the elements of this enumeration.

libsbml.AST_FUNCTION_ARCCOT = _libsbml.AST_FUNCTION_ARCCOT

One of the possible ASTNode types.

Each ASTNode has a type whose value is one of the elements of this enumeration.

libsbml.AST_FUNCTION_ARCCOTH = _libsbml.AST_FUNCTION_ARCCOTH

One of the possible ASTNode types.

Each ASTNode has a type whose value is one of the elements of this enumeration.

libsbml.AST_FUNCTION_ARCCSC = _libsbml.AST_FUNCTION_ARCCSC

One of the possible ASTNode types.

Each ASTNode has a type whose value is one of the elements of this enumeration.

libsbml.AST_FUNCTION_ARCCSCH = _libsbml.AST_FUNCTION_ARCCSCH

One of the possible ASTNode types.

Each ASTNode has a type whose value is one of the elements of this enumeration.

libsbml.AST_FUNCTION_ARCSEC = _libsbml.AST_FUNCTION_ARCSEC

One of the possible ASTNode types.

Each ASTNode has a type whose value is one of the elements of this enumeration.

libsbml.AST_FUNCTION_ARCSECH = _libsbml.AST_FUNCTION_ARCSECH

One of the possible ASTNode types.

Each ASTNode has a type whose value is one of the elements of this enumeration.

libsbml.AST_FUNCTION_ARCSIN = _libsbml.AST_FUNCTION_ARCSIN

One of the possible ASTNode types.

Each ASTNode has a type whose value is one of the elements of this enumeration.

libsbml.AST_FUNCTION_ARCSINH = _libsbml.AST_FUNCTION_ARCSINH

One of the possible ASTNode types.

Each ASTNode has a type whose value is one of the elements of this enumeration.

libsbml.AST_FUNCTION_ARCTAN = _libsbml.AST_FUNCTION_ARCTAN

One of the possible ASTNode types.

Each ASTNode has a type whose value is one of the elements of this enumeration.

libsbml.AST_FUNCTION_ARCTANH = _libsbml.AST_FUNCTION_ARCTANH

One of the possible ASTNode types.

Each ASTNode has a type whose value is one of the elements of this enumeration.

libsbml.AST_FUNCTION_CEILING = _libsbml.AST_FUNCTION_CEILING

One of the possible ASTNode types.

Each ASTNode has a type whose value is one of the elements of this enumeration.

libsbml.AST_FUNCTION_COS = _libsbml.AST_FUNCTION_COS

One of the possible ASTNode types.

Each ASTNode has a type whose value is one of the elements of this enumeration.

libsbml.AST_FUNCTION_COSH = _libsbml.AST_FUNCTION_COSH

One of the possible ASTNode types.

Each ASTNode has a type whose value is one of the elements of this enumeration.

libsbml.AST_FUNCTION_COT = _libsbml.AST_FUNCTION_COT

One of the possible ASTNode types.

Each ASTNode has a type whose value is one of the elements of this enumeration.

libsbml.AST_FUNCTION_COTH = _libsbml.AST_FUNCTION_COTH

One of the possible ASTNode types.

Each ASTNode has a type whose value is one of the elements of this enumeration.

libsbml.AST_FUNCTION_CSC = _libsbml.AST_FUNCTION_CSC

One of the possible ASTNode types.

Each ASTNode has a type whose value is one of the elements of this enumeration.

libsbml.AST_FUNCTION_CSCH = _libsbml.AST_FUNCTION_CSCH

One of the possible ASTNode types.

Each ASTNode has a type whose value is one of the elements of this enumeration.

libsbml.AST_FUNCTION_DELAY = _libsbml.AST_FUNCTION_DELAY

One of the possible ASTNode types.

Each ASTNode has a type whose value is one of the elements of this enumeration.

libsbml.AST_FUNCTION_EXP = _libsbml.AST_FUNCTION_EXP

One of the possible ASTNode types.

Each ASTNode has a type whose value is one of the elements of this enumeration.

libsbml.AST_FUNCTION_FACTORIAL = _libsbml.AST_FUNCTION_FACTORIAL

One of the possible ASTNode types.

Each ASTNode has a type whose value is one of the elements of this enumeration.

libsbml.AST_FUNCTION_FLOOR = _libsbml.AST_FUNCTION_FLOOR

One of the possible ASTNode types.

Each ASTNode has a type whose value is one of the elements of this enumeration.

libsbml.AST_FUNCTION_LN = _libsbml.AST_FUNCTION_LN

One of the possible ASTNode types.

Each ASTNode has a type whose value is one of the elements of this enumeration.

libsbml.AST_FUNCTION_LOG = _libsbml.AST_FUNCTION_LOG

One of the possible ASTNode types.

Each ASTNode has a type whose value is one of the elements of this enumeration.

libsbml.AST_FUNCTION_MAX = _libsbml.AST_FUNCTION_MAX

One of the possible ASTNode types.

Each ASTNode has a type whose value is one of the elements of this enumeration.

libsbml.AST_FUNCTION_MIN = _libsbml.AST_FUNCTION_MIN

One of the possible ASTNode types.

Each ASTNode has a type whose value is one of the elements of this enumeration.

libsbml.AST_FUNCTION_PIECEWISE = _libsbml.AST_FUNCTION_PIECEWISE

One of the possible ASTNode types.

Each ASTNode has a type whose value is one of the elements of this enumeration.

libsbml.AST_FUNCTION_POWER = _libsbml.AST_FUNCTION_POWER

One of the possible ASTNode types.

Each ASTNode has a type whose value is one of the elements of this enumeration.

libsbml.AST_FUNCTION_QUOTIENT = _libsbml.AST_FUNCTION_QUOTIENT

One of the possible ASTNode types.

Each ASTNode has a type whose value is one of the elements of this enumeration.

libsbml.AST_FUNCTION_RATE_OF = _libsbml.AST_FUNCTION_RATE_OF

One of the possible ASTNode types.

Each ASTNode has a type whose value is one of the elements of this enumeration.

libsbml.AST_FUNCTION_REM = _libsbml.AST_FUNCTION_REM

One of the possible ASTNode types.

Each ASTNode has a type whose value is one of the elements of this enumeration.

libsbml.AST_FUNCTION_ROOT = _libsbml.AST_FUNCTION_ROOT

One of the possible ASTNode types.

Each ASTNode has a type whose value is one of the elements of this enumeration.

libsbml.AST_FUNCTION_SEC = _libsbml.AST_FUNCTION_SEC

One of the possible ASTNode types.

Each ASTNode has a type whose value is one of the elements of this enumeration.

libsbml.AST_FUNCTION_SECH = _libsbml.AST_FUNCTION_SECH

One of the possible ASTNode types.

Each ASTNode has a type whose value is one of the elements of this enumeration.

libsbml.AST_FUNCTION_SIN = _libsbml.AST_FUNCTION_SIN

One of the possible ASTNode types.

Each ASTNode has a type whose value is one of the elements of this enumeration.

libsbml.AST_FUNCTION_SINH = _libsbml.AST_FUNCTION_SINH

One of the possible ASTNode types.

Each ASTNode has a type whose value is one of the elements of this enumeration.

libsbml.AST_FUNCTION_TAN = _libsbml.AST_FUNCTION_TAN

One of the possible ASTNode types.

Each ASTNode has a type whose value is one of the elements of this enumeration.

libsbml.AST_FUNCTION_TANH = _libsbml.AST_FUNCTION_TANH

One of the possible ASTNode types.

Each ASTNode has a type whose value is one of the elements of this enumeration.

libsbml.AST_INTEGER = _libsbml.AST_INTEGER

One of the possible ASTNode types.

Each ASTNode has a type whose value is one of the elements of this enumeration.

libsbml.AST_LAMBDA = _libsbml.AST_LAMBDA

One of the possible ASTNode types.

Each ASTNode has a type whose value is one of the elements of this enumeration.

libsbml.AST_LINEAR_ALGEBRA_DETERMINANT = _libsbml.AST_LINEAR_ALGEBRA_DETERMINANT

Enumeration marker for the possible ASTNode types.

libsbml.AST_LINEAR_ALGEBRA_MATRIX = _libsbml.AST_LINEAR_ALGEBRA_MATRIX

Enumeration marker for the possible ASTNode types.

libsbml.AST_LINEAR_ALGEBRA_MATRIXROW = _libsbml.AST_LINEAR_ALGEBRA_MATRIXROW

Enumeration marker for the possible ASTNode types.

libsbml.AST_LINEAR_ALGEBRA_OUTER_PRODUCT = _libsbml.AST_LINEAR_ALGEBRA_OUTER_PRODUCT

Enumeration marker for the possible ASTNode types.

libsbml.AST_LINEAR_ALGEBRA_SCALAR_PRODUCT = _libsbml.AST_LINEAR_ALGEBRA_SCALAR_PRODUCT

Enumeration marker for the possible ASTNode types.

libsbml.AST_LINEAR_ALGEBRA_SELECTOR = _libsbml.AST_LINEAR_ALGEBRA_SELECTOR

Enumeration marker for the possible ASTNode types.

libsbml.AST_LINEAR_ALGEBRA_TRANSPOSE = _libsbml.AST_LINEAR_ALGEBRA_TRANSPOSE

Enumeration marker for the possible ASTNode types.

libsbml.AST_LINEAR_ALGEBRA_VECTOR = _libsbml.AST_LINEAR_ALGEBRA_VECTOR

Enumeration marker for the possible ASTNode types.

libsbml.AST_LINEAR_ALGEBRA_VECTOR_PRODUCT = _libsbml.AST_LINEAR_ALGEBRA_VECTOR_PRODUCT

Enumeration marker for the possible ASTNode types.

libsbml.AST_LOGICAL_AND = _libsbml.AST_LOGICAL_AND

One of the possible ASTNode types.

Each ASTNode has a type whose value is one of the elements of this enumeration.

libsbml.AST_LOGICAL_EXISTS = _libsbml.AST_LOGICAL_EXISTS

Enumeration marker for the possible ASTNode types.

libsbml.AST_LOGICAL_FORALL = _libsbml.AST_LOGICAL_FORALL

Enumeration marker for the possible ASTNode types.

libsbml.AST_LOGICAL_IMPLIES = _libsbml.AST_LOGICAL_IMPLIES

One of the possible ASTNode types.

Each ASTNode has a type whose value is one of the elements of this enumeration.

libsbml.AST_LOGICAL_NOT = _libsbml.AST_LOGICAL_NOT

One of the possible ASTNode types.

Each ASTNode has a type whose value is one of the elements of this enumeration.

libsbml.AST_LOGICAL_OR = _libsbml.AST_LOGICAL_OR

One of the possible ASTNode types.

Each ASTNode has a type whose value is one of the elements of this enumeration.

libsbml.AST_LOGICAL_XOR = _libsbml.AST_LOGICAL_XOR

One of the possible ASTNode types.

Each ASTNode has a type whose value is one of the elements of this enumeration.

libsbml.AST_MINUS = _libsbml.AST_MINUS

One of the possible ASTNode types.

Each ASTNode has a type whose value is one of the elements of this enumeration.

libsbml.AST_NAME = _libsbml.AST_NAME

One of the possible ASTNode types.

Each ASTNode has a type whose value is one of the elements of this enumeration.

libsbml.AST_NAME_AVOGADRO = _libsbml.AST_NAME_AVOGADRO

One of the possible ASTNode types.

Each ASTNode has a type whose value is one of the elements of this enumeration.

libsbml.AST_NAME_TIME = _libsbml.AST_NAME_TIME

One of the possible ASTNode types.

Each ASTNode has a type whose value is one of the elements of this enumeration.

libsbml.AST_PLUS = _libsbml.AST_PLUS

One of the possible ASTNode types.

Each ASTNode has a type whose value is one of the elements of this enumeration.

libsbml.AST_POWER = _libsbml.AST_POWER

One of the possible ASTNode types.

Each ASTNode has a type whose value is one of the elements of this enumeration.

libsbml.AST_RATIONAL = _libsbml.AST_RATIONAL

One of the possible ASTNode types.

Each ASTNode has a type whose value is one of the elements of this enumeration.

libsbml.AST_REAL = _libsbml.AST_REAL

One of the possible ASTNode types.

Each ASTNode has a type whose value is one of the elements of this enumeration.

libsbml.AST_REAL_E = _libsbml.AST_REAL_E

One of the possible ASTNode types.

Each ASTNode has a type whose value is one of the elements of this enumeration.

libsbml.AST_RELATIONAL_EQ = _libsbml.AST_RELATIONAL_EQ

One of the possible ASTNode types.

Each ASTNode has a type whose value is one of the elements of this enumeration.

libsbml.AST_RELATIONAL_GEQ = _libsbml.AST_RELATIONAL_GEQ

One of the possible ASTNode types.

Each ASTNode has a type whose value is one of the elements of this enumeration.

libsbml.AST_RELATIONAL_GT = _libsbml.AST_RELATIONAL_GT

One of the possible ASTNode types.

Each ASTNode has a type whose value is one of the elements of this enumeration.

libsbml.AST_RELATIONAL_LEQ = _libsbml.AST_RELATIONAL_LEQ

One of the possible ASTNode types.

Each ASTNode has a type whose value is one of the elements of this enumeration.

libsbml.AST_RELATIONAL_LT = _libsbml.AST_RELATIONAL_LT

One of the possible ASTNode types.

Each ASTNode has a type whose value is one of the elements of this enumeration.

libsbml.AST_RELATIONAL_NEQ = _libsbml.AST_RELATIONAL_NEQ

One of the possible ASTNode types.

Each ASTNode has a type whose value is one of the elements of this enumeration.

libsbml.AST_SERIES_PRODUCT = _libsbml.AST_SERIES_PRODUCT

Enumeration marker for the possible ASTNode types.

libsbml.AST_SERIES_SUM = _libsbml.AST_SERIES_SUM

Enumeration marker for the possible ASTNode types.

libsbml.AST_STATISTICS_MEAN = _libsbml.AST_STATISTICS_MEAN

Enumeration marker for the possible ASTNode types.

libsbml.AST_STATISTICS_MEDIAN = _libsbml.AST_STATISTICS_MEDIAN

Enumeration marker for the possible ASTNode types.

libsbml.AST_STATISTICS_MODE = _libsbml.AST_STATISTICS_MODE

Enumeration marker for the possible ASTNode types.

libsbml.AST_STATISTICS_MOMENT = _libsbml.AST_STATISTICS_MOMENT

Enumeration marker for the possible ASTNode types.

libsbml.AST_STATISTICS_SDEV = _libsbml.AST_STATISTICS_SDEV

Enumeration marker for the possible ASTNode types.

libsbml.AST_STATISTICS_VARIANCE = _libsbml.AST_STATISTICS_VARIANCE

Enumeration marker for the possible ASTNode types.

libsbml.AST_TIMES = _libsbml.AST_TIMES

One of the possible ASTNode types.

Each ASTNode has a type whose value is one of the elements of this enumeration.

libsbml.AST_UNKNOWN = _libsbml.AST_UNKNOWN

One of the possible SBML Rule object types.

libsbml.AvogadroNotSupported = _libsbml.AvogadroNotSupported

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.BadCsymbolDefinitionURLValue = _libsbml.BadCsymbolDefinitionURLValue

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.BadlyFormedXML = _libsbml.BadlyFormedXML

A value in the enumeration of all the error and warning codes returned by the XML layer in libSBML.

Please consult the documentation for XMLError for an explanation of the meaning of this particular error code.

libsbml.BadMathML = _libsbml.BadMathML

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.BadMathMLNodeType = _libsbml.BadMathMLNodeType

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.BadProcessingInstruction = _libsbml.BadProcessingInstruction

A value in the enumeration of all the error and warning codes returned by the XML layer in libSBML.

Please consult the documentation for XMLError for an explanation of the meaning of this particular error code.

libsbml.BadXMLAttribute = _libsbml.BadXMLAttribute

A value in the enumeration of all the error and warning codes returned by the XML layer in libSBML.

Please consult the documentation for XMLError for an explanation of the meaning of this particular error code.

libsbml.BadXMLAttributeValue = _libsbml.BadXMLAttributeValue

A value in the enumeration of all the error and warning codes returned by the XML layer in libSBML.

Please consult the documentation for XMLError for an explanation of the meaning of this particular error code.

libsbml.BadXMLComment = _libsbml.BadXMLComment

A value in the enumeration of all the error and warning codes returned by the XML layer in libSBML.

Please consult the documentation for XMLError for an explanation of the meaning of this particular error code.

libsbml.BadXMLDecl = _libsbml.BadXMLDecl

A value in the enumeration of all the error and warning codes returned by the XML layer in libSBML.

Please consult the documentation for XMLError for an explanation of the meaning of this particular error code.

libsbml.BadXMLDeclLocation = _libsbml.BadXMLDeclLocation

A value in the enumeration of all the error and warning codes returned by the XML layer in libSBML.

Please consult the documentation for XMLError for an explanation of the meaning of this particular error code.

libsbml.BadXMLDOCTYPE = _libsbml.BadXMLDOCTYPE

A value in the enumeration of all the error and warning codes returned by the XML layer in libSBML.

Please consult the documentation for XMLError for an explanation of the meaning of this particular error code.

libsbml.BadXMLDocumentStructure = _libsbml.BadXMLDocumentStructure

A value in the enumeration of all the error and warning codes returned by the XML layer in libSBML.

Please consult the documentation for XMLError for an explanation of the meaning of this particular error code.

libsbml.BadXMLIDRef = _libsbml.BadXMLIDRef

A value in the enumeration of all the error and warning codes returned by the XML layer in libSBML.

Please consult the documentation for XMLError for an explanation of the meaning of this particular error code.

libsbml.BadXMLIDValue = _libsbml.BadXMLIDValue

A value in the enumeration of all the error and warning codes returned by the XML layer in libSBML.

Please consult the documentation for XMLError for an explanation of the meaning of this particular error code.

libsbml.BadXMLPrefix = _libsbml.BadXMLPrefix

A value in the enumeration of all the error and warning codes returned by the XML layer in libSBML.

Please consult the documentation for XMLError for an explanation of the meaning of this particular error code.

libsbml.BadXMLPrefixValue = _libsbml.BadXMLPrefixValue

A value in the enumeration of all the error and warning codes returned by the XML layer in libSBML.

Please consult the documentation for XMLError for an explanation of the meaning of this particular error code.

libsbml.BIOLOGICAL_QUALIFIER = _libsbml.BIOLOGICAL_QUALIFIER

One of the possible MIRIAM annotation types used by CVTerm.

libsbml.BooleanNumericDiscrepancy = _libsbml.BooleanNumericDiscrepancy

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.BooleanOpsNeedBooleanArgs = _libsbml.BooleanOpsNeedBooleanArgs

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.BothAmountAndConcentrationSet = _libsbml.BothAmountAndConcentrationSet

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.BothStoichiometryAndMath = _libsbml.BothStoichiometryAndMath

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.BQB_ENCODES = _libsbml.BQB_ENCODES

One of the possible MIRIAM annotation types used by CVTerm.

libsbml.BQB_HAS_PART = _libsbml.BQB_HAS_PART

One of the possible MIRIAM annotation types used by CVTerm.

libsbml.BQB_HAS_PROPERTY = _libsbml.BQB_HAS_PROPERTY

One of the possible MIRIAM annotation types used by CVTerm.

libsbml.BQB_HAS_TAXON = _libsbml.BQB_HAS_TAXON

One of the possible MIRIAM annotation types used by CVTerm.

libsbml.BQB_HAS_VERSION = _libsbml.BQB_HAS_VERSION

One of the possible MIRIAM annotation types used by CVTerm.

libsbml.BQB_IS = _libsbml.BQB_IS

One of the possible MIRIAM annotation types used by CVTerm.

libsbml.BQB_IS_DESCRIBED_BY = _libsbml.BQB_IS_DESCRIBED_BY

One of the possible MIRIAM annotation types used by CVTerm.

libsbml.BQB_IS_ENCODED_BY = _libsbml.BQB_IS_ENCODED_BY

One of the possible MIRIAM annotation types used by CVTerm.

libsbml.BQB_IS_HOMOLOG_TO = _libsbml.BQB_IS_HOMOLOG_TO

One of the possible MIRIAM annotation types used by CVTerm.

libsbml.BQB_IS_PART_OF = _libsbml.BQB_IS_PART_OF

One of the possible MIRIAM annotation types used by CVTerm.

libsbml.BQB_IS_PROPERTY_OF = _libsbml.BQB_IS_PROPERTY_OF

One of the possible MIRIAM annotation types used by CVTerm.

libsbml.BQB_IS_VERSION_OF = _libsbml.BQB_IS_VERSION_OF

One of the possible MIRIAM annotation types used by CVTerm.

libsbml.BQB_OCCURS_IN = _libsbml.BQB_OCCURS_IN

One of the possible MIRIAM annotation types used by CVTerm.

libsbml.BQB_UNKNOWN = _libsbml.BQB_UNKNOWN

One of the possible MIRIAM annotation types used by CVTerm.

libsbml.BQM_HAS_INSTANCE = _libsbml.BQM_HAS_INSTANCE

One of the possible MIRIAM annotation types used by CVTerm.

libsbml.BQM_IS = _libsbml.BQM_IS

One of the possible MIRIAM annotation types used by CVTerm.

libsbml.BQM_IS_DERIVED_FROM = _libsbml.BQM_IS_DERIVED_FROM

One of the possible MIRIAM annotation types used by CVTerm.

libsbml.BQM_IS_DESCRIBED_BY = _libsbml.BQM_IS_DESCRIBED_BY

One of the possible MIRIAM annotation types used by CVTerm.

libsbml.BQM_IS_INSTANCE_OF = _libsbml.BQM_IS_INSTANCE_OF

One of the possible MIRIAM annotation types used by CVTerm.

libsbml.BQM_UNKNOWN = _libsbml.BQM_UNKNOWN

One of the possible MIRIAM annotation types used by CVTerm.

libsbml.CannotConvertToL1V1 = _libsbml.CannotConvertToL1V1

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.CannotVerifyUnitsObjectNoMath = _libsbml.CannotVerifyUnitsObjectNoMath

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.CelsiusNoLongerValid = _libsbml.CelsiusNoLongerValid

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.CiCannotReference0DCompartment = _libsbml.CiCannotReference0DCompartment

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.CircularDependencyRateOf = _libsbml.CircularDependencyRateOf

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.CircularRuleDependency = _libsbml.CircularRuleDependency

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.CNV_TYPE_BOOL = _libsbml.CNV_TYPE_BOOL

One of the possible ConversionOption data type indicators.

Indicates the value type is a Boolean.

libsbml.CNV_TYPE_DOUBLE = _libsbml.CNV_TYPE_DOUBLE

One of the possible ConversionOption data type indicators.

Indicates the value type is a float-sized float.

libsbml.CNV_TYPE_INT = _libsbml.CNV_TYPE_INT

One of the possible ConversionOption data type indicators.

Indicates the value type is an integer.

libsbml.CNV_TYPE_SINGLE = _libsbml.CNV_TYPE_SINGLE

One of the possible ConversionOption data type indicators.

Indicates the value type is a float.

libsbml.CNV_TYPE_STRING = _libsbml.CNV_TYPE_STRING

One of the possible ConversionOption data type indicators.

Indicates the value type is a string.

libsbml.CompartmentNotOnL1Reaction = _libsbml.CompartmentNotOnL1Reaction

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.CompartmentOnReaction = _libsbml.CompartmentOnReaction

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.CompartmentShouldHaveSize = _libsbml.CompartmentShouldHaveSize

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.CompartmentTypeNotValidAttribute = _libsbml.CompartmentTypeNotValidAttribute

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.CompartmentTypeNotValidComponent = _libsbml.CompartmentTypeNotValidComponent

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.CompAttributeRequiredMissing = _libsbml.CompAttributeRequiredMissing

comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.CompAttributeRequiredMustBeBoolean = _libsbml.CompAttributeRequiredMustBeBoolean

comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.CompAttributeRequiredMustBeTrue = _libsbml.CompAttributeRequiredMustBeTrue

comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.CompCircularExternalModelReference = _libsbml.CompCircularExternalModelReference

comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.CompDeletedReplacement = _libsbml.CompDeletedReplacement

comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.CompDeletionAllowedAttributes = _libsbml.CompDeletionAllowedAttributes

comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.CompDeletionMustReferenceObject = _libsbml.CompDeletionMustReferenceObject

comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.CompDeletionMustReferOnlyOneObject = _libsbml.CompDeletionMustReferOnlyOneObject

comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.CompDeprecatedDeleteFunction = _libsbml.CompDeprecatedDeleteFunction

comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.CompDeprecatedReplaceFunction = _libsbml.CompDeprecatedReplaceFunction

comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.CompDeprecatedSBaseRefSpelling = _libsbml.CompDeprecatedSBaseRefSpelling

comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.CompDuplicateComponentId = _libsbml.CompDuplicateComponentId

comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.CompElementNotInNs = _libsbml.CompElementNotInNs

comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.CompEmptyLOModelDefs = _libsbml.CompEmptyLOModelDefs

comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.CompEmptyLOReplacedElements = _libsbml.CompEmptyLOReplacedElements

comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.CompExtentConversionMustBeParameter = _libsbml.CompExtentConversionMustBeParameter

comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.CompExtModDefAllowedAttributes = _libsbml.CompExtModDefAllowedAttributes

comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.CompExtModDefAllowedCoreAttributes = _libsbml.CompExtModDefAllowedCoreAttributes

comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.CompExtModDefAllowedElements = _libsbml.CompExtModDefAllowedElements

comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.CompExtModDefBad = _libsbml.CompExtModDefBad

comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.CompExtModMd5DoesNotMatch = _libsbml.CompExtModMd5DoesNotMatch

comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.CompFlatModelNotValid = _libsbml.CompFlatModelNotValid

comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.CompFlatteningNotImplementedNotReqd = _libsbml.CompFlatteningNotImplementedNotReqd

comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.CompFlatteningNotImplementedReqd = _libsbml.CompFlatteningNotImplementedReqd

comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.CompFlatteningNotRecognisedNotReqd = _libsbml.CompFlatteningNotRecognisedNotReqd

comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.CompFlatteningNotRecognisedReqd = _libsbml.CompFlatteningNotRecognisedReqd

comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.CompFlatteningWarning = _libsbml.CompFlatteningWarning

comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.CompIdRefMayReferenceUnknownPackage = _libsbml.CompIdRefMayReferenceUnknownPackage

comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.CompIdRefMustReferenceObject = _libsbml.CompIdRefMustReferenceObject

comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.CompInvalidConversionFactorSyntax = _libsbml.CompInvalidConversionFactorSyntax

comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.CompInvalidDeletionSyntax = _libsbml.CompInvalidDeletionSyntax

comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.CompInvalidExtentConvFactorSyntax = _libsbml.CompInvalidExtentConvFactorSyntax

comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.CompInvalidIdRefSyntax = _libsbml.CompInvalidIdRefSyntax

comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.CompInvalidMD5Syntax = _libsbml.CompInvalidMD5Syntax

comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.CompInvalidMetaIdRefSyntax = _libsbml.CompInvalidMetaIdRefSyntax

comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.CompInvalidModelRefSyntax = _libsbml.CompInvalidModelRefSyntax

comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.CompInvalidNameSyntax = _libsbml.CompInvalidNameSyntax

comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.CompInvalidPortRefSyntax = _libsbml.CompInvalidPortRefSyntax

comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.CompInvalidSIdSyntax = _libsbml.CompInvalidSIdSyntax

comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.CompInvalidSourceSyntax = _libsbml.CompInvalidSourceSyntax

comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.CompInvalidSubmodelRefSyntax = _libsbml.CompInvalidSubmodelRefSyntax

comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.CompInvalidTimeConvFactorSyntax = _libsbml.CompInvalidTimeConvFactorSyntax

comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.CompInvalidUnitRefSyntax = _libsbml.CompInvalidUnitRefSyntax

comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.CompLineNumbersUnreliable = _libsbml.CompLineNumbersUnreliable

comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.CompLODeletionAllowedAttributes = _libsbml.CompLODeletionAllowedAttributes

comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.CompLODeletionsAllowedElements = _libsbml.CompLODeletionsAllowedElements

comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.CompLOExtModDefsAllowedAttributes = _libsbml.CompLOExtModDefsAllowedAttributes

comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.CompLOExtModelDefsAllowedElements = _libsbml.CompLOExtModelDefsAllowedElements

comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.CompLOModelDefsAllowedAttributes = _libsbml.CompLOModelDefsAllowedAttributes

comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.CompLOModelDefsAllowedElements = _libsbml.CompLOModelDefsAllowedElements

comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.CompLOPortsAllowedAttributes = _libsbml.CompLOPortsAllowedAttributes

comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.CompLOPortsAllowedElements = _libsbml.CompLOPortsAllowedElements

comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.CompLOReplacedElementsAllowedAttribs = _libsbml.CompLOReplacedElementsAllowedAttribs

comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.CompLOReplaceElementsAllowedElements = _libsbml.CompLOReplaceElementsAllowedElements

comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.CompLOSubmodelsAllowedAttributes = _libsbml.CompLOSubmodelsAllowedAttributes

comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.CompLOSubmodelsAllowedElements = _libsbml.CompLOSubmodelsAllowedElements

comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.CompMetaIdRefMayReferenceUnknownPkg = _libsbml.CompMetaIdRefMayReferenceUnknownPkg

comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.CompMetaIdRefMustReferenceObject = _libsbml.CompMetaIdRefMustReferenceObject

comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.CompModCannotCircularlyReferenceSelf = _libsbml.CompModCannotCircularlyReferenceSelf

comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.CompModelFlatteningFailed = _libsbml.CompModelFlatteningFailed

comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.CompModReferenceMustIdOfModel = _libsbml.CompModReferenceMustIdOfModel

comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.CompModReferenceSyntax = _libsbml.CompModReferenceSyntax

comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.CompMustReplaceIDs = _libsbml.CompMustReplaceIDs

comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.CompMustReplaceMetaIDs = _libsbml.CompMustReplaceMetaIDs

comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.CompMustReplacePackageIDs = _libsbml.CompMustReplacePackageIDs

comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.CompMustReplaceSameClass = _libsbml.CompMustReplaceSameClass

comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.CompNoEmptyListOfOnModel = _libsbml.CompNoEmptyListOfOnModel

comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.CompNoModelInReference = _libsbml.CompNoModelInReference

comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.CompNoMultipleReferences = _libsbml.CompNoMultipleReferences

comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.CompNSUndeclared = _libsbml.CompNSUndeclared

comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.CompOneListOfDeletionOnSubmodel = _libsbml.CompOneListOfDeletionOnSubmodel

comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.CompOneListOfExtModelDefinitions = _libsbml.CompOneListOfExtModelDefinitions

comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.CompOneListOfModelDefinitions = _libsbml.CompOneListOfModelDefinitions

comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.CompOneListOfOnModel = _libsbml.CompOneListOfOnModel

comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.CompOneListOfReplacedElements = _libsbml.CompOneListOfReplacedElements

comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.CompOneReplacedByElement = _libsbml.CompOneReplacedByElement

comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.CompOneSBaseRefOnly = _libsbml.CompOneSBaseRefOnly

comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.CompParentOfSBRefChildMustBeSubmodel = _libsbml.CompParentOfSBRefChildMustBeSubmodel

comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.CompPortAllowedAttributes = _libsbml.CompPortAllowedAttributes

comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.CompPortMustReferenceObject = _libsbml.CompPortMustReferenceObject

comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.CompPortMustReferenceOnlyOneObject = _libsbml.CompPortMustReferenceOnlyOneObject

comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.CompPortReferencesUnique = _libsbml.CompPortReferencesUnique

comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.CompPortRefMustReferencePort = _libsbml.CompPortRefMustReferencePort

comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.CompReferenceMustBeL3 = _libsbml.CompReferenceMustBeL3

comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.CompReplacedByAllowedAttributes = _libsbml.CompReplacedByAllowedAttributes

comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.CompReplacedByMustRefObject = _libsbml.CompReplacedByMustRefObject

comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.CompReplacedByMustRefOnlyOne = _libsbml.CompReplacedByMustRefOnlyOne

comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.CompReplacedBySubModelRef = _libsbml.CompReplacedBySubModelRef

comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.CompReplacedElementAllowedAttributes = _libsbml.CompReplacedElementAllowedAttributes

comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.CompReplacedElementConvFactorRef = _libsbml.CompReplacedElementConvFactorRef

comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.CompReplacedElementDeletionRef = _libsbml.CompReplacedElementDeletionRef

comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.CompReplacedElementMustRefObject = _libsbml.CompReplacedElementMustRefObject

comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.CompReplacedElementMustRefOnlyOne = _libsbml.CompReplacedElementMustRefOnlyOne

comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.CompReplacedElementNoDelAndConvFact = _libsbml.CompReplacedElementNoDelAndConvFact

comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.CompReplacedElementSameReference = _libsbml.CompReplacedElementSameReference

comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.CompReplacedElementSubModelRef = _libsbml.CompReplacedElementSubModelRef

comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.CompReplacedUnitsShouldMatch = _libsbml.CompReplacedUnitsShouldMatch

comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.CompRequiredFalseIfAllElementsReplaced = _libsbml.CompRequiredFalseIfAllElementsReplaced

comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.CompRequiredTrueIfElementsRemain = _libsbml.CompRequiredTrueIfElementsRemain

comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.CompSBaseRefMustReferenceObject = _libsbml.CompSBaseRefMustReferenceObject

comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.CompSBaseRefMustReferenceOnlyOneObject = _libsbml.CompSBaseRefMustReferenceOnlyOneObject

comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.CompSubmodelAllowedAttributes = _libsbml.CompSubmodelAllowedAttributes

comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.CompSubmodelAllowedCoreAttributes = _libsbml.CompSubmodelAllowedCoreAttributes

comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.CompSubmodelAllowedElements = _libsbml.CompSubmodelAllowedElements

comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.CompSubmodelCannotReferenceSelf = _libsbml.CompSubmodelCannotReferenceSelf

comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.CompSubmodelMustReferenceModel = _libsbml.CompSubmodelMustReferenceModel

comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.CompSubmodelNoEmptyLODeletions = _libsbml.CompSubmodelNoEmptyLODeletions

comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.CompTimeConversionMustBeParameter = _libsbml.CompTimeConversionMustBeParameter

comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.CompUniqueModelIds = _libsbml.CompUniqueModelIds

comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.CompUniquePortIds = _libsbml.CompUniquePortIds

comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.CompUnitRefMustReferenceUnitDef = _libsbml.CompUnitRefMustReferenceUnitDef

comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.CompUnknown = _libsbml.CompUnknown

long

comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.CompUnresolvedReference = _libsbml.CompUnresolvedReference

comp A value in the enumeration of all the error and warning codes generated by the libSBML “comp” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.ConstantNotValidAttribute = _libsbml.ConstantNotValidAttribute

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.ConstantSpeciesNotValidAttribute = _libsbml.ConstantSpeciesNotValidAttribute

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.ConstraintContainsDOCTYPE = _libsbml.ConstraintContainsDOCTYPE

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.ConstraintContainsXMLDecl = _libsbml.ConstraintContainsXMLDecl

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.ConstraintMathNotBoolean = _libsbml.ConstraintMathNotBoolean

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.ConstraintNotInXHTMLNamespace = _libsbml.ConstraintNotInXHTMLNamespace

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.ConstraintNotValidComponent = _libsbml.ConstraintNotValidComponent

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.ConversionFactorMustConstant = _libsbml.ConversionFactorMustConstant

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.ConversionFactorNotInL1 = _libsbml.ConversionFactorNotInL1

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.ConversionFactorOnSpecies = _libsbml.ConversionFactorOnSpecies

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.ConvertibleMathInitialAssignment = _libsbml.ConvertibleMathInitialAssignment

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.DanglingUnitReference = _libsbml.DanglingUnitReference

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.DanglingUnitSIdRef = _libsbml.DanglingUnitSIdRef

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.DelayNeedsValuesFromTriggerTime = _libsbml.DelayNeedsValuesFromTriggerTime

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.DelayUnitsNotTime = _libsbml.DelayUnitsNotTime

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.DisallowedDefinitionURLUse = _libsbml.DisallowedDefinitionURLUse

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.DisallowedMathMLEncodingUse = _libsbml.DisallowedMathMLEncodingUse

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.DisallowedMathMLSymbol = _libsbml.DisallowedMathMLSymbol

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.DisallowedMathTypeAttributeUse = _libsbml.DisallowedMathTypeAttributeUse

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.DisallowedMathTypeAttributeValue = _libsbml.DisallowedMathTypeAttributeValue

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.DisallowedMathUnitsUse = _libsbml.DisallowedMathUnitsUse

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.DoubleExponentNotSupported = _libsbml.DoubleExponentNotSupported

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.DuplicateAnnotationInvalidInL2v2 = _libsbml.DuplicateAnnotationInvalidInL2v2

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.DuplicateAnnotationInvalidInL2v3 = _libsbml.DuplicateAnnotationInvalidInL2v3

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.DuplicateAnnotationInvalidInL2v4 = _libsbml.DuplicateAnnotationInvalidInL2v4

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.DuplicateAnnotationInvalidInL3v1 = _libsbml.DuplicateAnnotationInvalidInL3v1

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.DuplicateAnnotationNamespaces = _libsbml.DuplicateAnnotationNamespaces

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.DuplicateComponentId = _libsbml.DuplicateComponentId

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.DuplicateLocalParameterId = _libsbml.DuplicateLocalParameterId

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.DuplicateMetaId = _libsbml.DuplicateMetaId

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.DuplicateUnitDefinitionId = _libsbml.DuplicateUnitDefinitionId

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.DuplicateXMLAttribute = _libsbml.DuplicateXMLAttribute

A value in the enumeration of all the error and warning codes returned by the XML layer in libSBML.

Please consult the documentation for XMLError for an explanation of the meaning of this particular error code.

libsbml.EM_ARRAYS = _libsbml.EM_ARRAYS

Extended math added by the 'arrays' package.

libsbml.EM_DISTRIB = _libsbml.EM_DISTRIB

Extended math added by the 'distrib' package.

libsbml.EM_L3V2 = _libsbml.EM_L3V2

Extended math added in l3v2.

libsbml.EM_UNKNOWN = _libsbml.EM_UNKNOWN

Unknown node: will not produce any MathML.

libsbml.EmptyListElement = _libsbml.EmptyListElement

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.EmptyListInKineticLaw = _libsbml.EmptyListInKineticLaw

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.EmptyListInReaction = _libsbml.EmptyListInReaction

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.EmptyListOfElementNotSupported = _libsbml.EmptyListOfElementNotSupported

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.EmptyListOfUnits = _libsbml.EmptyListOfUnits

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.EmptyUnitListElement = _libsbml.EmptyUnitListElement

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.EventAndAssignmentRuleForId = _libsbml.EventAndAssignmentRuleForId

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.EventAssignCompartmentMismatch = _libsbml.EventAssignCompartmentMismatch

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.EventAssignmentForConstantEntity = _libsbml.EventAssignmentForConstantEntity

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.EventAssignParameterMismatch = _libsbml.EventAssignParameterMismatch

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.EventAssignSpeciesMismatch = _libsbml.EventAssignSpeciesMismatch

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.EventAssignStoichiometryMismatch = _libsbml.EventAssignStoichiometryMismatch

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.EventNotValidComponent = _libsbml.EventNotValidComponent

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.ExtentUnitsNotSubstance = _libsbml.ExtentUnitsNotSubstance

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.FailedMathMLReadOfDouble = _libsbml.FailedMathMLReadOfDouble

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.FailedMathMLReadOfExponential = _libsbml.FailedMathMLReadOfExponential

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.FailedMathMLReadOfInteger = _libsbml.FailedMathMLReadOfInteger

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.FailedMathMLReadOfRational = _libsbml.FailedMathMLReadOfRational

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.FastReactionsNotSupported = _libsbml.FastReactionsNotSupported

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.FbcActiveObjectiveRefersObjective = _libsbml.FbcActiveObjectiveRefersObjective

fbc A value in the enumeration of all the error and warning codes generated by the libSBML “fbc” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.FbcActiveObjectiveSyntax = _libsbml.FbcActiveObjectiveSyntax

fbc A value in the enumeration of all the error and warning codes generated by the libSBML “fbc” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.FbcAndAllowedCoreAttributes = _libsbml.FbcAndAllowedCoreAttributes

fbc A value in the enumeration of all the error and warning codes generated by the libSBML “fbc” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.FbcAndAllowedCoreElements = _libsbml.FbcAndAllowedCoreElements

fbc A value in the enumeration of all the error and warning codes generated by the libSBML “fbc” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.FbcAndTwoChildren = _libsbml.FbcAndTwoChildren

fbc A value in the enumeration of all the error and warning codes generated by the libSBML “fbc” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.FbcAttributeRequiredMissing = _libsbml.FbcAttributeRequiredMissing

fbc A value in the enumeration of all the error and warning codes generated by the libSBML “fbc” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.FbcAttributeRequiredMustBeBoolean = _libsbml.FbcAttributeRequiredMustBeBoolean

fbc A value in the enumeration of all the error and warning codes generated by the libSBML “fbc” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.FbcDuplicateComponentId = _libsbml.FbcDuplicateComponentId

fbc A value in the enumeration of all the error and warning codes generated by the libSBML “fbc” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.FbcElementNotInNs = _libsbml.FbcElementNotInNs

fbc A value in the enumeration of all the error and warning codes generated by the libSBML “fbc” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.FbcFluxBoundAllowedElements = _libsbml.FbcFluxBoundAllowedElements

fbc A value in the enumeration of all the error and warning codes generated by the libSBML “fbc” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.FbcFluxBoundAllowedL3Attributes = _libsbml.FbcFluxBoundAllowedL3Attributes

fbc A value in the enumeration of all the error and warning codes generated by the libSBML “fbc” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.FbcFluxBoundNameMustBeString = _libsbml.FbcFluxBoundNameMustBeString

fbc A value in the enumeration of all the error and warning codes generated by the libSBML “fbc” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.FbcFluxBoundOperationMustBeEnum = _libsbml.FbcFluxBoundOperationMustBeEnum

fbc A value in the enumeration of all the error and warning codes generated by the libSBML “fbc” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.FbcFluxBoundReactionMustExist = _libsbml.FbcFluxBoundReactionMustExist

fbc A value in the enumeration of all the error and warning codes generated by the libSBML “fbc” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.FbcFluxBoundRectionMustBeSIdRef = _libsbml.FbcFluxBoundRectionMustBeSIdRef

fbc A value in the enumeration of all the error and warning codes generated by the libSBML “fbc” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.FbcFluxBoundRequiredAttributes = _libsbml.FbcFluxBoundRequiredAttributes

fbc A value in the enumeration of all the error and warning codes generated by the libSBML “fbc” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.FbcFluxBoundsForReactionConflict = _libsbml.FbcFluxBoundsForReactionConflict

fbc A value in the enumeration of all the error and warning codes generated by the libSBML “fbc” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.FbcFluxBoundValueMustBeDouble = _libsbml.FbcFluxBoundValueMustBeDouble

fbc A value in the enumeration of all the error and warning codes generated by the libSBML “fbc” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.FbcFluxObjectAllowedElements = _libsbml.FbcFluxObjectAllowedElements

fbc A value in the enumeration of all the error and warning codes generated by the libSBML “fbc” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.FbcFluxObjectAllowedL3Attributes = _libsbml.FbcFluxObjectAllowedL3Attributes

fbc A value in the enumeration of all the error and warning codes generated by the libSBML “fbc” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.FbcFluxObjectCoefficientMustBeDouble = _libsbml.FbcFluxObjectCoefficientMustBeDouble

fbc A value in the enumeration of all the error and warning codes generated by the libSBML “fbc” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.FbcFluxObjectCoefficientWhenStrict = _libsbml.FbcFluxObjectCoefficientWhenStrict

fbc A value in the enumeration of all the error and warning codes generated by the libSBML “fbc” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.FbcFluxObjectNameMustBeString = _libsbml.FbcFluxObjectNameMustBeString

fbc A value in the enumeration of all the error and warning codes generated by the libSBML “fbc” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.FbcFluxObjectReactionMustBeSIdRef = _libsbml.FbcFluxObjectReactionMustBeSIdRef

fbc A value in the enumeration of all the error and warning codes generated by the libSBML “fbc” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.FbcFluxObjectReactionMustExist = _libsbml.FbcFluxObjectReactionMustExist

fbc A value in the enumeration of all the error and warning codes generated by the libSBML “fbc” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.FbcFluxObjectRequiredAttributes = _libsbml.FbcFluxObjectRequiredAttributes

fbc A value in the enumeration of all the error and warning codes generated by the libSBML “fbc” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.FbcGeneProdAssocAllowedAttribs = _libsbml.FbcGeneProdAssocAllowedAttribs

fbc A value in the enumeration of all the error and warning codes generated by the libSBML “fbc” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.FbcGeneProdAssocAllowedCoreAttribs = _libsbml.FbcGeneProdAssocAllowedCoreAttribs

fbc A value in the enumeration of all the error and warning codes generated by the libSBML “fbc” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.FbcGeneProdAssocAllowedCoreElements = _libsbml.FbcGeneProdAssocAllowedCoreElements

fbc A value in the enumeration of all the error and warning codes generated by the libSBML “fbc” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.FbcGeneProdAssocContainsOneElement = _libsbml.FbcGeneProdAssocContainsOneElement

fbc A value in the enumeration of all the error and warning codes generated by the libSBML “fbc” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.FbcGeneProdAssocIdSyntax = _libsbml.FbcGeneProdAssocIdSyntax

fbc A value in the enumeration of all the error and warning codes generated by the libSBML “fbc” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.FbcGeneProdAssocNameMustBeString = _libsbml.FbcGeneProdAssocNameMustBeString

fbc A value in the enumeration of all the error and warning codes generated by the libSBML “fbc” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.FbcGeneProdRefAllowedAttribs = _libsbml.FbcGeneProdRefAllowedAttribs

fbc A value in the enumeration of all the error and warning codes generated by the libSBML “fbc” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.FbcGeneProdRefAllowedCoreAttribs = _libsbml.FbcGeneProdRefAllowedCoreAttribs

fbc A value in the enumeration of all the error and warning codes generated by the libSBML “fbc” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.FbcGeneProdRefAllowedCoreElements = _libsbml.FbcGeneProdRefAllowedCoreElements

fbc A value in the enumeration of all the error and warning codes generated by the libSBML “fbc” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.FbcGeneProdRefGeneProductExists = _libsbml.FbcGeneProdRefGeneProductExists

fbc A value in the enumeration of all the error and warning codes generated by the libSBML “fbc” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.FbcGeneProdRefGeneProductSIdRef = _libsbml.FbcGeneProdRefGeneProductSIdRef

fbc A value in the enumeration of all the error and warning codes generated by the libSBML “fbc” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.FbcGeneProductAllowedAttributes = _libsbml.FbcGeneProductAllowedAttributes

fbc A value in the enumeration of all the error and warning codes generated by the libSBML “fbc” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.FbcGeneProductAllowedCoreAttributes = _libsbml.FbcGeneProductAllowedCoreAttributes

fbc A value in the enumeration of all the error and warning codes generated by the libSBML “fbc” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.FbcGeneProductAllowedCoreElements = _libsbml.FbcGeneProductAllowedCoreElements

fbc A value in the enumeration of all the error and warning codes generated by the libSBML “fbc” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.FbcGeneProductAssocSpeciesMustExist = _libsbml.FbcGeneProductAssocSpeciesMustExist

fbc A value in the enumeration of all the error and warning codes generated by the libSBML “fbc” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.FbcGeneProductLabelMustBeString = _libsbml.FbcGeneProductLabelMustBeString

fbc A value in the enumeration of all the error and warning codes generated by the libSBML “fbc” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.FbcGeneProductLabelMustBeUnique = _libsbml.FbcGeneProductLabelMustBeUnique

fbc A value in the enumeration of all the error and warning codes generated by the libSBML “fbc” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.FbcGeneProductNameMustBeString = _libsbml.FbcGeneProductNameMustBeString

fbc A value in the enumeration of all the error and warning codes generated by the libSBML “fbc” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.FbcLOFluxBoundsAllowedAttributes = _libsbml.FbcLOFluxBoundsAllowedAttributes

fbc A value in the enumeration of all the error and warning codes generated by the libSBML “fbc” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.FbcLOFluxBoundsAllowedElements = _libsbml.FbcLOFluxBoundsAllowedElements

fbc A value in the enumeration of all the error and warning codes generated by the libSBML “fbc” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.FbcLOGeneProductsAllowedAttributes = _libsbml.FbcLOGeneProductsAllowedAttributes

fbc A value in the enumeration of all the error and warning codes generated by the libSBML “fbc” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.FbcLOGeneProductsAllowedElements = _libsbml.FbcLOGeneProductsAllowedElements

fbc A value in the enumeration of all the error and warning codes generated by the libSBML “fbc” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.FbcLOObjectivesAllowedAttributes = _libsbml.FbcLOObjectivesAllowedAttributes

fbc A value in the enumeration of all the error and warning codes generated by the libSBML “fbc” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.FbcLOObjectivesAllowedElements = _libsbml.FbcLOObjectivesAllowedElements

fbc A value in the enumeration of all the error and warning codes generated by the libSBML “fbc” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.FbcModelMustHaveStrict = _libsbml.FbcModelMustHaveStrict

fbc A value in the enumeration of all the error and warning codes generated by the libSBML “fbc” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.FbcModelStrictMustBeBoolean = _libsbml.FbcModelStrictMustBeBoolean

fbc A value in the enumeration of all the error and warning codes generated by the libSBML “fbc” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.FbcNoEmptyListOfs = _libsbml.FbcNoEmptyListOfs

fbc A value in the enumeration of all the error and warning codes generated by the libSBML “fbc” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.FbcNSUndeclared = _libsbml.FbcNSUndeclared

fbc A value in the enumeration of all the error and warning codes generated by the libSBML “fbc” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.FbcObjectiveAllowedElements = _libsbml.FbcObjectiveAllowedElements

fbc A value in the enumeration of all the error and warning codes generated by the libSBML “fbc” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.FbcObjectiveAllowedL3Attributes = _libsbml.FbcObjectiveAllowedL3Attributes

fbc A value in the enumeration of all the error and warning codes generated by the libSBML “fbc” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.FbcObjectiveLOFluxObjAllowedAttribs = _libsbml.FbcObjectiveLOFluxObjAllowedAttribs

fbc A value in the enumeration of all the error and warning codes generated by the libSBML “fbc” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.FbcObjectiveLOFluxObjMustNotBeEmpty = _libsbml.FbcObjectiveLOFluxObjMustNotBeEmpty

fbc A value in the enumeration of all the error and warning codes generated by the libSBML “fbc” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.FbcObjectiveLOFluxObjOnlyFluxObj = _libsbml.FbcObjectiveLOFluxObjOnlyFluxObj

fbc A value in the enumeration of all the error and warning codes generated by the libSBML “fbc” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.FbcObjectiveNameMustBeString = _libsbml.FbcObjectiveNameMustBeString

fbc A value in the enumeration of all the error and warning codes generated by the libSBML “fbc” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.FbcObjectiveOneListOfObjectives = _libsbml.FbcObjectiveOneListOfObjectives

fbc A value in the enumeration of all the error and warning codes generated by the libSBML “fbc” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.FbcObjectiveRequiredAttributes = _libsbml.FbcObjectiveRequiredAttributes

fbc A value in the enumeration of all the error and warning codes generated by the libSBML “fbc” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.FbcObjectiveTypeMustBeEnum = _libsbml.FbcObjectiveTypeMustBeEnum

fbc A value in the enumeration of all the error and warning codes generated by the libSBML “fbc” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.FbcOnlyOneEachListOf = _libsbml.FbcOnlyOneEachListOf

fbc A value in the enumeration of all the error and warning codes generated by the libSBML “fbc” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.FbcOrAllowedCoreAttributes = _libsbml.FbcOrAllowedCoreAttributes

fbc A value in the enumeration of all the error and warning codes generated by the libSBML “fbc” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.FbcOrAllowedCoreElements = _libsbml.FbcOrAllowedCoreElements

fbc A value in the enumeration of all the error and warning codes generated by the libSBML “fbc” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.FbcOrTwoChildren = _libsbml.FbcOrTwoChildren

fbc A value in the enumeration of all the error and warning codes generated by the libSBML “fbc” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.FbcReactionAllowedAttributes = _libsbml.FbcReactionAllowedAttributes

fbc A value in the enumeration of all the error and warning codes generated by the libSBML “fbc” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.FbcReactionBoundsMustHaveValuesStrict = _libsbml.FbcReactionBoundsMustHaveValuesStrict

fbc A value in the enumeration of all the error and warning codes generated by the libSBML “fbc” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.FbcReactionBoundsNotAssignedStrict = _libsbml.FbcReactionBoundsNotAssignedStrict

fbc A value in the enumeration of all the error and warning codes generated by the libSBML “fbc” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.FbcReactionConstantBoundsStrict = _libsbml.FbcReactionConstantBoundsStrict

fbc A value in the enumeration of all the error and warning codes generated by the libSBML “fbc” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.FbcReactionLwrBoundNotInfStrict = _libsbml.FbcReactionLwrBoundNotInfStrict

fbc A value in the enumeration of all the error and warning codes generated by the libSBML “fbc” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.FbcReactionLwrBoundRefExists = _libsbml.FbcReactionLwrBoundRefExists

fbc A value in the enumeration of all the error and warning codes generated by the libSBML “fbc” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.FbcReactionLwrBoundSIdRef = _libsbml.FbcReactionLwrBoundSIdRef

fbc A value in the enumeration of all the error and warning codes generated by the libSBML “fbc” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.FbcReactionLwrLessThanUpStrict = _libsbml.FbcReactionLwrLessThanUpStrict

fbc A value in the enumeration of all the error and warning codes generated by the libSBML “fbc” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.FbcReactionMustHaveBoundsStrict = _libsbml.FbcReactionMustHaveBoundsStrict

fbc A value in the enumeration of all the error and warning codes generated by the libSBML “fbc” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.FbcReactionOnlyOneGeneProdAss = _libsbml.FbcReactionOnlyOneGeneProdAss

fbc A value in the enumeration of all the error and warning codes generated by the libSBML “fbc” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.FbcReactionUpBoundNotNegInfStrict = _libsbml.FbcReactionUpBoundNotNegInfStrict

fbc A value in the enumeration of all the error and warning codes generated by the libSBML “fbc” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.FbcReactionUpBoundRefExists = _libsbml.FbcReactionUpBoundRefExists

fbc A value in the enumeration of all the error and warning codes generated by the libSBML “fbc” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.FbcReactionUpBoundSIdRef = _libsbml.FbcReactionUpBoundSIdRef

fbc A value in the enumeration of all the error and warning codes generated by the libSBML “fbc” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.FbcRequiredFalse = _libsbml.FbcRequiredFalse

fbc A value in the enumeration of all the error and warning codes generated by the libSBML “fbc” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.FbcSBMLSIdSyntax = _libsbml.FbcSBMLSIdSyntax

fbc A value in the enumeration of all the error and warning codes generated by the libSBML “fbc” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.FbcSpeciesAllowedL3Attributes = _libsbml.FbcSpeciesAllowedL3Attributes

fbc A value in the enumeration of all the error and warning codes generated by the libSBML “fbc” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.FbcSpeciesChargeMustBeInteger = _libsbml.FbcSpeciesChargeMustBeInteger

fbc A value in the enumeration of all the error and warning codes generated by the libSBML “fbc” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.FbcSpeciesFormulaMustBeString = _libsbml.FbcSpeciesFormulaMustBeString

fbc A value in the enumeration of all the error and warning codes generated by the libSBML “fbc” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.FbcSpeciesReferenceConstantStrict = _libsbml.FbcSpeciesReferenceConstantStrict

fbc A value in the enumeration of all the error and warning codes generated by the libSBML “fbc” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.FbcSpeciesRefNotAssignedStrict = _libsbml.FbcSpeciesRefNotAssignedStrict

fbc A value in the enumeration of all the error and warning codes generated by the libSBML “fbc” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.FbcSpeciesRefsStoichMustBeRealStrict = _libsbml.FbcSpeciesRefsStoichMustBeRealStrict

fbc A value in the enumeration of all the error and warning codes generated by the libSBML “fbc” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.FbcUnknown = _libsbml.FbcUnknown

long

fbc A value in the enumeration of all the error and warning codes generated by the libSBML “fbc” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.FILL_RULE_EVENODD = _libsbml.FILL_RULE_EVENODD

render A value in an enumeration defined by the libSBML “render” extension to implement functionality for the SBML Level 3 Render package.

libsbml.FILL_RULE_INHERIT = _libsbml.FILL_RULE_INHERIT

render A value in an enumeration defined by the libSBML “render” extension to implement functionality for the SBML Level 3 Render package.

libsbml.FILL_RULE_INVALID = _libsbml.FILL_RULE_INVALID

render A value in an enumeration defined by the libSBML “render” extension to implement functionality for the SBML Level 3 Render package.

libsbml.FILL_RULE_NONZERO = _libsbml.FILL_RULE_NONZERO

render A value in an enumeration defined by the libSBML “render” extension to implement functionality for the SBML Level 3 Render package.

libsbml.FILL_RULE_UNSET = _libsbml.FILL_RULE_UNSET

render A value in an enumeration defined by the libSBML “render” extension to implement functionality for the SBML Level 3 Render package.

libsbml.FLUXBOUND_OPERATION_EQUAL = _libsbml.FLUXBOUND_OPERATION_EQUAL

fbc One of the possible FluxBound operation types.

The FluxBound class is part of the SBML Level 3 Flux Balanced Constraints package. Its purpose is to to hold a single equality or inequality that represents the maximum or minimum value a reaction flux can obtain at steady state. One of the attributes of FluxBound is "operation". This code is one of the possible values of the "operation" attribute. The possible legal values are less than or equal to, greater than or equal to, or equal to. The additional two options "less than" and "greater than" are not legal values for the FluxBound "operation" attribute, but are provided to allow backwards compatibility with an earlier version of the draft specification.

libsbml.FLUXBOUND_OPERATION_GREATER = _libsbml.FLUXBOUND_OPERATION_GREATER

fbc One of the possible FluxBound operation types.

The FluxBound class is part of the SBML Level 3 Flux Balanced Constraints package. Its purpose is to to hold a single equality or inequality that represents the maximum or minimum value a reaction flux can obtain at steady state. One of the attributes of FluxBound is "operation". This code is one of the possible values of the "operation" attribute. The possible legal values are less than or equal to, greater than or equal to, or equal to. The additional two options "less than" and "greater than" are not legal values for the FluxBound "operation" attribute, but are provided to allow backwards compatibility with an earlier version of the draft specification.

libsbml.FLUXBOUND_OPERATION_GREATER_EQUAL = _libsbml.FLUXBOUND_OPERATION_GREATER_EQUAL

fbc One of the possible FluxBound operation types.

The FluxBound class is part of the SBML Level 3 Flux Balanced Constraints package. Its purpose is to to hold a single equality or inequality that represents the maximum or minimum value a reaction flux can obtain at steady state. One of the attributes of FluxBound is "operation". This code is one of the possible values of the "operation" attribute. The possible legal values are less than or equal to, greater than or equal to, or equal to. The additional two options "less than" and "greater than" are not legal values for the FluxBound "operation" attribute, but are provided to allow backwards compatibility with an earlier version of the draft specification.

libsbml.FLUXBOUND_OPERATION_LESS = _libsbml.FLUXBOUND_OPERATION_LESS

fbc One of the possible FluxBound operation types.

The FluxBound class is part of the SBML Level 3 Flux Balanced Constraints package. Its purpose is to to hold a single equality or inequality that represents the maximum or minimum value a reaction flux can obtain at steady state. One of the attributes of FluxBound is "operation". This code is one of the possible values of the "operation" attribute. The possible legal values are less than or equal to, greater than or equal to, or equal to. The additional two options "less than" and "greater than" are not legal values for the FluxBound "operation" attribute, but are provided to allow backwards compatibility with an earlier version of the draft specification.

libsbml.FLUXBOUND_OPERATION_LESS_EQUAL = _libsbml.FLUXBOUND_OPERATION_LESS_EQUAL

long

fbc One of the possible FluxBound operation types.

The FluxBound class is part of the SBML Level 3 Flux Balanced Constraints package. Its purpose is to to hold a single equality or inequality that represents the maximum or minimum value a reaction flux can obtain at steady state. One of the attributes of FluxBound is "operation". This code is one of the possible values of the "operation" attribute. The possible legal values are less than or equal to, greater than or equal to, or equal to. The additional two options "less than" and "greater than" are not legal values for the FluxBound "operation" attribute, but are provided to allow backwards compatibility with an earlier version of the draft specification.

libsbml.FLUXBOUND_OPERATION_UNKNOWN = _libsbml.FLUXBOUND_OPERATION_UNKNOWN
libsbml.FONT_FAMILY_INVALID = _libsbml.FONT_FAMILY_INVALID

render A value in an enumeration defined by the libSBML “render” extension to implement functionality for the SBML Level 3 Render package.

libsbml.FONT_FAMILY_MONOSPACE = _libsbml.FONT_FAMILY_MONOSPACE

render A value in an enumeration defined by the libSBML “render” extension to implement functionality for the SBML Level 3 Render package.

libsbml.FONT_FAMILY_SANS_SERIF = _libsbml.FONT_FAMILY_SANS_SERIF

render A value in an enumeration defined by the libSBML “render” extension to implement functionality for the SBML Level 3 Render package.

libsbml.FONT_FAMILY_SERIF = _libsbml.FONT_FAMILY_SERIF

render A value in an enumeration defined by the libSBML “render” extension to implement functionality for the SBML Level 3 Render package.

libsbml.FONT_STYLE_INVALID = _libsbml.FONT_STYLE_INVALID

render A value in an enumeration defined by the libSBML “render” extension to implement functionality for the SBML Level 3 Render package.

libsbml.FONT_STYLE_ITALIC = _libsbml.FONT_STYLE_ITALIC

render A value in an enumeration defined by the libSBML “render” extension to implement functionality for the SBML Level 3 Render package.

libsbml.FONT_STYLE_NORMAL = _libsbml.FONT_STYLE_NORMAL

render A value in an enumeration defined by the libSBML “render” extension to implement functionality for the SBML Level 3 Render package.

libsbml.FONT_STYLE_UNSET = _libsbml.FONT_STYLE_UNSET

render A value in an enumeration defined by the libSBML “render” extension to implement functionality for the SBML Level 3 Render package.

libsbml.FONT_WEIGHT_BOLD = _libsbml.FONT_WEIGHT_BOLD

render A value in an enumeration defined by the libSBML “render” extension to implement functionality for the SBML Level 3 Render package.

libsbml.FONT_WEIGHT_INVALID = _libsbml.FONT_WEIGHT_INVALID

render A value in an enumeration defined by the libSBML “render” extension to implement functionality for the SBML Level 3 Render package.

libsbml.FONT_WEIGHT_NORMAL = _libsbml.FONT_WEIGHT_NORMAL

render A value in an enumeration defined by the libSBML “render” extension to implement functionality for the SBML Level 3 Render package.

libsbml.FONT_WEIGHT_UNSET = _libsbml.FONT_WEIGHT_UNSET

render A value in an enumeration defined by the libSBML “render” extension to implement functionality for the SBML Level 3 Render package.

libsbml.FormulaInLevel1KL = _libsbml.FormulaInLevel1KL

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.FuncDefNotValidComponent = _libsbml.FuncDefNotValidComponent

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.FunctionDefMathNotLambda = _libsbml.FunctionDefMathNotLambda

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.GENE_ASSOCIATION = _libsbml.GENE_ASSOCIATION

fbc One of the possible Association types.

The Association class is not part of the official SBML Level 3 Flux Balance Constraints specification, but is instead a proposed future development of the package. If adopted, it would be a child of a GeneAssociation that would describe a single 'and' or 'or' relationship between two or more genes or other associations.

The present code is one of the possible Association types for this proposed SBML Level 3 Flux Balance Constraints (“fbc”) package future development.

libsbml.GeneralWarningNotSpecified = _libsbml.GeneralWarningNotSpecified

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.GlobalUnitsNotDeclared = _libsbml.GlobalUnitsNotDeclared

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.GRADIENT_SPREAD_METHOD_INVALID = _libsbml.GRADIENT_SPREAD_METHOD_INVALID

render A value in an enumeration defined by the libSBML “render” extension to implement functionality for the SBML Level 3 Render package.

libsbml.GRADIENT_SPREADMETHOD_PAD = _libsbml.GRADIENT_SPREADMETHOD_PAD

render A value in an enumeration defined by the libSBML “render” extension to implement functionality for the SBML Level 3 Render package.

libsbml.GRADIENT_SPREADMETHOD_REFLECT = _libsbml.GRADIENT_SPREADMETHOD_REFLECT

render A value in an enumeration defined by the libSBML “render” extension to implement functionality for the SBML Level 3 Render package.

libsbml.GRADIENT_SPREADMETHOD_REPEAT = _libsbml.GRADIENT_SPREADMETHOD_REPEAT

render A value in an enumeration defined by the libSBML “render” extension to implement functionality for the SBML Level 3 Render package.

libsbml.GROUP_KIND_CLASSIFICATION = _libsbml.GROUP_KIND_CLASSIFICATION

long

groups One of the possible Group kinds.

libsbml.GROUP_KIND_COLLECTION = _libsbml.GROUP_KIND_COLLECTION

groups One of the possible Group kinds.

libsbml.GROUP_KIND_PARTONOMY = _libsbml.GROUP_KIND_PARTONOMY

groups One of the possible Group kinds.

libsbml.GROUP_KIND_UNKNOWN = _libsbml.GROUP_KIND_UNKNOWN

groups Unrecognized Group kind.

libsbml.GroupsAttributeRequiredMissing = _libsbml.GroupsAttributeRequiredMissing

groups A value in the enumeration of all the error and warning codes generated by the libSBML “groups” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.GroupsAttributeRequiredMustBeBoolean = _libsbml.GroupsAttributeRequiredMustBeBoolean

groups A value in the enumeration of all the error and warning codes generated by the libSBML “groups” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.GroupsAttributeRequiredMustHaveValue = _libsbml.GroupsAttributeRequiredMustHaveValue

groups A value in the enumeration of all the error and warning codes generated by the libSBML “groups” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.GroupsDuplicateComponentId = _libsbml.GroupsDuplicateComponentId

groups A value in the enumeration of all the error and warning codes generated by the libSBML “groups” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.GroupsElementNotInNs = _libsbml.GroupsElementNotInNs

groups A value in the enumeration of all the error and warning codes generated by the libSBML “groups” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.GroupsGroupAllowedAttributes = _libsbml.GroupsGroupAllowedAttributes

groups A value in the enumeration of all the error and warning codes generated by the libSBML “groups” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.GroupsGroupAllowedCoreAttributes = _libsbml.GroupsGroupAllowedCoreAttributes

groups A value in the enumeration of all the error and warning codes generated by the libSBML “groups” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.GroupsGroupAllowedCoreElements = _libsbml.GroupsGroupAllowedCoreElements

groups A value in the enumeration of all the error and warning codes generated by the libSBML “groups” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.GroupsGroupAllowedElements = _libsbml.GroupsGroupAllowedElements

groups A value in the enumeration of all the error and warning codes generated by the libSBML “groups” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.GroupsGroupEmptyLOElements = _libsbml.GroupsGroupEmptyLOElements

groups A value in the enumeration of all the error and warning codes generated by the libSBML “groups” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.GroupsGroupKindMustBeGroupKindEnum = _libsbml.GroupsGroupKindMustBeGroupKindEnum

groups A value in the enumeration of all the error and warning codes generated by the libSBML “groups” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.GroupsGroupLOMembersAllowedAttributes = _libsbml.GroupsGroupLOMembersAllowedAttributes

groups A value in the enumeration of all the error and warning codes generated by the libSBML “groups” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.GroupsGroupLOMembersAllowedCoreAttributes = _libsbml.GroupsGroupLOMembersAllowedCoreAttributes

groups A value in the enumeration of all the error and warning codes generated by the libSBML “groups” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.GroupsGroupLOMembersAllowedCoreElements = _libsbml.GroupsGroupLOMembersAllowedCoreElements

groups A value in the enumeration of all the error and warning codes generated by the libSBML “groups” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.GroupsGroupNameMustBeString = _libsbml.GroupsGroupNameMustBeString

groups A value in the enumeration of all the error and warning codes generated by the libSBML “groups” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.GroupsIdSyntaxRule = _libsbml.GroupsIdSyntaxRule

groups A value in the enumeration of all the error and warning codes generated by the libSBML “groups” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.GroupsLOMembersConsistentReferences = _libsbml.GroupsLOMembersConsistentReferences

groups A value in the enumeration of all the error and warning codes generated by the libSBML “groups” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.GroupsLOMembersNameMustBeString = _libsbml.GroupsLOMembersNameMustBeString

groups A value in the enumeration of all the error and warning codes generated by the libSBML “groups” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.GroupsMemberAllowedAttributes = _libsbml.GroupsMemberAllowedAttributes

groups A value in the enumeration of all the error and warning codes generated by the libSBML “groups” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.GroupsMemberAllowedCoreAttributes = _libsbml.GroupsMemberAllowedCoreAttributes

groups A value in the enumeration of all the error and warning codes generated by the libSBML “groups” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.GroupsMemberAllowedCoreElements = _libsbml.GroupsMemberAllowedCoreElements

groups A value in the enumeration of all the error and warning codes generated by the libSBML “groups” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.GroupsMemberIdRefMustBeSBase = _libsbml.GroupsMemberIdRefMustBeSBase

groups A value in the enumeration of all the error and warning codes generated by the libSBML “groups” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.GroupsMemberIdRefMustBeSId = _libsbml.GroupsMemberIdRefMustBeSId

groups A value in the enumeration of all the error and warning codes generated by the libSBML “groups” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.GroupsMemberMetaIdRefMustBeID = _libsbml.GroupsMemberMetaIdRefMustBeID

groups A value in the enumeration of all the error and warning codes generated by the libSBML “groups” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.GroupsMemberMetaIdRefMustBeSBase = _libsbml.GroupsMemberMetaIdRefMustBeSBase

groups A value in the enumeration of all the error and warning codes generated by the libSBML “groups” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.GroupsMemberNameMustBeString = _libsbml.GroupsMemberNameMustBeString

groups A value in the enumeration of all the error and warning codes generated by the libSBML “groups” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.GroupsModelAllowedElements = _libsbml.GroupsModelAllowedElements

groups A value in the enumeration of all the error and warning codes generated by the libSBML “groups” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.GroupsModelEmptyLOElements = _libsbml.GroupsModelEmptyLOElements

groups A value in the enumeration of all the error and warning codes generated by the libSBML “groups” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.GroupsModelLOGroupsAllowedCoreAttributes = _libsbml.GroupsModelLOGroupsAllowedCoreAttributes

groups A value in the enumeration of all the error and warning codes generated by the libSBML “groups” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.GroupsModelLOGroupsAllowedCoreElements = _libsbml.GroupsModelLOGroupsAllowedCoreElements

groups A value in the enumeration of all the error and warning codes generated by the libSBML “groups” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.GroupsNotCircularReferences = _libsbml.GroupsNotCircularReferences

groups A value in the enumeration of all the error and warning codes generated by the libSBML “groups” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.GroupsNSUndeclared = _libsbml.GroupsNSUndeclared

groups A value in the enumeration of all the error and warning codes generated by the libSBML “groups” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.GroupsUnknown = _libsbml.GroupsUnknown

long

groups A value in the enumeration of all the error and warning codes generated by the libSBML “groups” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.H_TEXTANCHOR_END = _libsbml.H_TEXTANCHOR_END

render A value in an enumeration defined by the libSBML “render” extension to implement functionality for the SBML Level 3 Render package.

libsbml.H_TEXTANCHOR_INVALID = _libsbml.H_TEXTANCHOR_INVALID

render A value in an enumeration defined by the libSBML “render” extension to implement functionality for the SBML Level 3 Render package.

libsbml.H_TEXTANCHOR_MIDDLE = _libsbml.H_TEXTANCHOR_MIDDLE

render A value in an enumeration defined by the libSBML “render” extension to implement functionality for the SBML Level 3 Render package.

libsbml.H_TEXTANCHOR_START = _libsbml.H_TEXTANCHOR_START

render A value in an enumeration defined by the libSBML “render” extension to implement functionality for the SBML Level 3 Render package.

libsbml.H_TEXTANCHOR_UNSET = _libsbml.H_TEXTANCHOR_UNSET

render A value in an enumeration defined by the libSBML “render” extension to implement functionality for the SBML Level 3 Render package.

libsbml.HasOnlySubsNoSpatialUnits = _libsbml.HasOnlySubsNoSpatialUnits

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.HasOnlySubstanceUnitsNotinL1 = _libsbml.HasOnlySubstanceUnitsNotinL1

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.HasOnlySubsUnitsNotValidAttribute = _libsbml.HasOnlySubsUnitsNotValidAttribute

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.IdNameSBaseInL3V2 = _libsbml.IdNameSBaseInL3V2

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.IdNotValidAttribute = _libsbml.IdNotValidAttribute

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.InconsistentArgUnits = _libsbml.InconsistentArgUnits

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.InconsistentArgUnitsWarnings = _libsbml.InconsistentArgUnitsWarnings

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.InconsistentExponUnitsWarnings = _libsbml.InconsistentExponUnitsWarnings

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.InconsistentKineticLawUnitsL3 = _libsbml.InconsistentKineticLawUnitsL3

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.InconsistentPowerUnitsWarnings = _libsbml.InconsistentPowerUnitsWarnings

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.IncorrectCompartmentSpatialDimensions = _libsbml.IncorrectCompartmentSpatialDimensions

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.IncorrectOrderInConstraint = _libsbml.IncorrectOrderInConstraint

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.IncorrectOrderInEvent = _libsbml.IncorrectOrderInEvent

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.IncorrectOrderInKineticLaw = _libsbml.IncorrectOrderInKineticLaw

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.IncorrectOrderInModel = _libsbml.IncorrectOrderInModel

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.IncorrectOrderInReaction = _libsbml.IncorrectOrderInReaction

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.INFIX_SYNTAX_CURLY_BRACES = _libsbml.INFIX_SYNTAX_CURLY_BRACES
libsbml.INFIX_SYNTAX_CURLY_BRACES_SEMICOLON = _libsbml.INFIX_SYNTAX_CURLY_BRACES_SEMICOLON
libsbml.INFIX_SYNTAX_NAMED_SQUARE_BRACKETS = _libsbml.INFIX_SYNTAX_NAMED_SQUARE_BRACKETS
libsbml.InitAssignCompartmenMismatch = _libsbml.InitAssignCompartmenMismatch

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.InitAssignmentAndRuleForSameId = _libsbml.InitAssignmentAndRuleForSameId

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.InitAssignmentCannotRef0DComp = _libsbml.InitAssignmentCannotRef0DComp

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.InitAssignParameterMismatch = _libsbml.InitAssignParameterMismatch

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.InitAssignSpeciesMismatch = _libsbml.InitAssignSpeciesMismatch

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.InitAssignStoichiometryMismatch = _libsbml.InitAssignStoichiometryMismatch

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.InitialAssignNotValidComponent = _libsbml.InitialAssignNotValidComponent

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.InitialValueFalseEventNotSupported = _libsbml.InitialValueFalseEventNotSupported

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.InitialValueNotBoolean = _libsbml.InitialValueNotBoolean

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.INPUT_SIGN_DUAL = _libsbml.INPUT_SIGN_DUAL

qual One of the possible Input "sign" attribute values.

The Input class is part of the SBML Level 3 Qualitative Models package. Its purpose is to represent a qualitative species that participates in a Transition; specifically, in Petri nets, these are the input places of the transition, and in logical models, they are the regulators of the species whose behaviour is defined by the transition. Input has an attribute named "sign" that is used to indicate whether the contribution of this input is positive, negative, both (dual) or unknown. This enables a model to distinguish between stimulation and inhibition and can facilitate interpretation of themodel without the mathematics. The sign is particularly used for visualization purposes and has no impact on the mathematical interpretation.

The present code is one of the possible values of the "sign" attribute of an Input object.

libsbml.INPUT_SIGN_NEGATIVE = _libsbml.INPUT_SIGN_NEGATIVE

qual One of the possible Input "sign" attribute values.

The Input class is part of the SBML Level 3 Qualitative Models package. Its purpose is to represent a qualitative species that participates in a Transition; specifically, in Petri nets, these are the input places of the transition, and in logical models, they are the regulators of the species whose behaviour is defined by the transition. Input has an attribute named "sign" that is used to indicate whether the contribution of this input is positive, negative, both (dual) or unknown. This enables a model to distinguish between stimulation and inhibition and can facilitate interpretation of themodel without the mathematics. The sign is particularly used for visualization purposes and has no impact on the mathematical interpretation.

The present code is one of the possible values of the "sign" attribute of an Input object.

libsbml.INPUT_SIGN_POSITIVE = _libsbml.INPUT_SIGN_POSITIVE

long

qual One of the possible Input "sign" attribute values.

The Input class is part of the SBML Level 3 Qualitative Models package. Its purpose is to represent a qualitative species that participates in a Transition; specifically, in Petri nets, these are the input places of the transition, and in logical models, they are the regulators of the species whose behaviour is defined by the transition. Input has an attribute named "sign" that is used to indicate whether the contribution of this input is positive, negative, both (dual) or unknown. This enables a model to distinguish between stimulation and inhibition and can facilitate interpretation of themodel without the mathematics. The sign is particularly used for visualization purposes and has no impact on the mathematical interpretation.

The present code is one of the possible values of the "sign" attribute of an Input object.

libsbml.INPUT_SIGN_UNKNOWN = _libsbml.INPUT_SIGN_UNKNOWN

qual One of the possible Input "sign" attribute values.

The Input class is part of the SBML Level 3 Qualitative Models package. Its purpose is to represent a qualitative species that participates in a Transition; specifically, in Petri nets, these are the input places of the transition, and in logical models, they are the regulators of the species whose behaviour is defined by the transition. Input has an attribute named "sign" that is used to indicate whether the contribution of this input is positive, negative, both (dual) or unknown. This enables a model to distinguish between stimulation and inhibition and can facilitate interpretation of themodel without the mathematics. The sign is particularly used for visualization purposes and has no impact on the mathematical interpretation.

The present code is one of the possible values of the "sign" attribute of an Input object.

libsbml.INPUT_SIGN_VALUE_NOTSET = _libsbml.INPUT_SIGN_VALUE_NOTSET

qual One of the possible Input "sign" attribute values.

The Input class is part of the SBML Level 3 Qualitative Models package. Its purpose is to represent a qualitative species that participates in a Transition; specifically, in Petri nets, these are the input places of the transition, and in logical models, they are the regulators of the species whose behaviour is defined by the transition. Input has an attribute named "sign" that is used to indicate whether the contribution of this input is positive, negative, both (dual) or unknown. This enables a model to distinguish between stimulation and inhibition and can facilitate interpretation of themodel without the mathematics. The sign is particularly used for visualization purposes and has no impact on the mathematical interpretation.

The present code is one of the possible values of the "sign" attribute of an Input object.

libsbml.INPUT_TRANSITION_EFFECT_CONSUMPTION = _libsbml.INPUT_TRANSITION_EFFECT_CONSUMPTION

qual One of the possible Input transition effects.

The Input class is part of the SBML Level 3 Qualitative Models package. Its purpose is to represent a qualitative species that participates in a Transition; specifically, in Petri nets, these are the input places of the transition, and in logical models, they are the regulators of the species whose behaviour is defined by the transition. Input has an attribute named "transitionEffect" that is used to describe how the QualitativeSpecies referenced by the Input is affected by the Transition.

The present code is one of the possible values of the "transitionEffect" attribute of an Input object.

libsbml.INPUT_TRANSITION_EFFECT_NONE = _libsbml.INPUT_TRANSITION_EFFECT_NONE

long

qual One of the possible Input transition effects.

The Input class is part of the SBML Level 3 Qualitative Models package. Its purpose is to represent a qualitative species that participates in a Transition; specifically, in Petri nets, these are the input places of the transition, and in logical models, they are the regulators of the species whose behaviour is defined by the transition. Input has an attribute named "transitionEffect" that is used to describe how the QualitativeSpecies referenced by the Input is affected by the Transition.

The present code is one of the possible values of the "transitionEffect" attribute of an Input object.

libsbml.INPUT_TRANSITION_EFFECT_UNKNOWN = _libsbml.INPUT_TRANSITION_EFFECT_UNKNOWN

qual One of the possible Input transition effects.

The Input class is part of the SBML Level 3 Qualitative Models package. Its purpose is to represent a qualitative species that participates in a Transition; specifically, in Petri nets, these are the input places of the transition, and in logical models, they are the regulators of the species whose behaviour is defined by the transition. Input has an attribute named "transitionEffect" that is used to describe how the QualitativeSpecies referenced by the Input is affected by the Transition.

The present code is one of the possible values of the "transitionEffect" attribute of an Input object.

libsbml.IntegerSpatialDimensions = _libsbml.IntegerSpatialDimensions

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.InternalXMLParserError = _libsbml.InternalXMLParserError

A value in the enumeration of all the error and warning codes returned by the XML layer in libSBML.

Please consult the documentation for XMLError for an explanation of the meaning of this particular error code.

libsbml.Invalid1DCompartmentUnits = _libsbml.Invalid1DCompartmentUnits

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.Invalid2DCompartmentUnits = _libsbml.Invalid2DCompartmentUnits

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.Invalid3DCompartmentUnits = _libsbml.Invalid3DCompartmentUnits

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.InvalidAfterXMLContent = _libsbml.InvalidAfterXMLContent

A value in the enumeration of all the error and warning codes returned by the XML layer in libSBML.

Please consult the documentation for XMLError for an explanation of the meaning of this particular error code.

libsbml.InvalidApplyCiInLambda = _libsbml.InvalidApplyCiInLambda

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.InvalidAreaRedefinition = _libsbml.InvalidAreaRedefinition

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.InvalidAssignRuleVariable = _libsbml.InvalidAssignRuleVariable

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.InvalidCharInXML = _libsbml.InvalidCharInXML

A value in the enumeration of all the error and warning codes returned by the XML layer in libSBML.

Please consult the documentation for XMLError for an explanation of the meaning of this particular error code.

libsbml.InvalidCiInLambda = _libsbml.InvalidCiInLambda

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.InvalidCompartmentSBOTerm = _libsbml.InvalidCompartmentSBOTerm

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.InvalidCompartmentTypeRef = _libsbml.InvalidCompartmentTypeRef

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.InvalidCompartmentTypeSBOTerm = _libsbml.InvalidCompartmentTypeSBOTerm

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.InvalidConstraintContent = _libsbml.InvalidConstraintContent

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.InvalidConstraintSBOTerm = _libsbml.InvalidConstraintSBOTerm

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.InvalidDelaySBOTerm = _libsbml.InvalidDelaySBOTerm

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.InvalidEventAssignmentSBOTerm = _libsbml.InvalidEventAssignmentSBOTerm

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.InvalidEventAssignmentVariable = _libsbml.InvalidEventAssignmentVariable

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.InvalidEventSBOTerm = _libsbml.InvalidEventSBOTerm

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.InvalidFunctionDefReturnType = _libsbml.InvalidFunctionDefReturnType

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.InvalidFunctionDefSBOTerm = _libsbml.InvalidFunctionDefSBOTerm

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.InvalidIdSyntax = _libsbml.InvalidIdSyntax

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.InvalidInitAssignSBOTerm = _libsbml.InvalidInitAssignSBOTerm

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.InvalidInitAssignSymbol = _libsbml.InvalidInitAssignSymbol

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.InvalidKineticLawSBOTerm = _libsbml.InvalidKineticLawSBOTerm

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.InvalidL1CompartmentUnits = _libsbml.InvalidL1CompartmentUnits

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.InvalidLengthRedefinition = _libsbml.InvalidLengthRedefinition

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.InvalidLocalParameterSBOTerm = _libsbml.InvalidLocalParameterSBOTerm

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.InvalidMathElement = _libsbml.InvalidMathElement

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.InvalidMathMLAttribute = _libsbml.InvalidMathMLAttribute

Attribute not allowed on this element.

libsbml.InvalidMetaidSyntax = _libsbml.InvalidMetaidSyntax

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.InvalidModelSBOTerm = _libsbml.InvalidModelSBOTerm

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.InvalidModifiersList = _libsbml.InvalidModifiersList

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.InvalidNamespaceOnSBML = _libsbml.InvalidNamespaceOnSBML

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.InvalidNameSyntax = _libsbml.InvalidNameSyntax

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.InvalidNoArgsPassedToFunctionDef = _libsbml.InvalidNoArgsPassedToFunctionDef

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.InvalidNotesContent = _libsbml.InvalidNotesContent

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.InvalidPackageLevelVersion = _libsbml.InvalidPackageLevelVersion

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.InvalidParameterSBOTerm = _libsbml.InvalidParameterSBOTerm

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.InvalidParameterUnits = _libsbml.InvalidParameterUnits

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.InvalidRateRuleVariable = _libsbml.InvalidRateRuleVariable

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.InvalidReactantsProductsList = _libsbml.InvalidReactantsProductsList

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.InvalidReactionSBOTerm = _libsbml.InvalidReactionSBOTerm

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.InvalidRuleOrdering = _libsbml.InvalidRuleOrdering

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.InvalidRuleSBOTerm = _libsbml.InvalidRuleSBOTerm

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.InvalidSBMLElementSBOTerm = _libsbml.InvalidSBMLElementSBOTerm

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.InvalidSBMLLevelVersion = _libsbml.InvalidSBMLLevelVersion

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.InvalidSBOTermSyntax = _libsbml.InvalidSBOTermSyntax

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.InvalidSpeciesCompartmentRef = _libsbml.InvalidSpeciesCompartmentRef

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.InvalidSpeciesReference = _libsbml.InvalidSpeciesReference

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.InvalidSpeciesReferenceSBOTerm = _libsbml.InvalidSpeciesReferenceSBOTerm

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.InvalidSpeciesSBOTerm = _libsbml.InvalidSpeciesSBOTerm

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.InvalidSpeciesSusbstanceUnits = _libsbml.InvalidSpeciesSusbstanceUnits

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.InvalidSpeciesTypeRef = _libsbml.InvalidSpeciesTypeRef

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.InvalidSpeciesTypeSBOTerm = _libsbml.InvalidSpeciesTypeSBOTerm

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.InvalidSubstanceRedefinition = _libsbml.InvalidSubstanceRedefinition

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.InvalidTargetLevelVersion = _libsbml.InvalidTargetLevelVersion

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.InvalidTimeRedefinition = _libsbml.InvalidTimeRedefinition

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.InvalidTriggerSBOTerm = _libsbml.InvalidTriggerSBOTerm

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.InvalidUnitDefId = _libsbml.InvalidUnitDefId

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.InvalidUnitIdSyntax = _libsbml.InvalidUnitIdSyntax

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.InvalidUnitKind = _libsbml.InvalidUnitKind

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.InvalidUnitsValue = _libsbml.InvalidUnitsValue

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.InvalidVolumeRedefinition = _libsbml.InvalidVolumeRedefinition

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.InvalidXMLConstruct = _libsbml.InvalidXMLConstruct

A value in the enumeration of all the error and warning codes returned by the XML layer in libSBML.

Please consult the documentation for XMLError for an explanation of the meaning of this particular error code.

libsbml.KineticLawNotSubstancePerTime = _libsbml.KineticLawNotSubstancePerTime

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.KineticLawParametersAreLocalOnly = _libsbml.KineticLawParametersAreLocalOnly

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.L1V1CompartmentVolumeReqd = _libsbml.L1V1CompartmentVolumeReqd

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.L3AreaUnitsOnModel = _libsbml.L3AreaUnitsOnModel

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.L3ConversionFactorOnModel = _libsbml.L3ConversionFactorOnModel

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.L3ExtentUnitsOnModel = _libsbml.L3ExtentUnitsOnModel

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.L3LengthUnitsOnModel = _libsbml.L3LengthUnitsOnModel

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.L3NotSchemaConformant = _libsbml.L3NotSchemaConformant

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.L3NotSupported = _libsbml.L3NotSupported

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.L3P_AVOGADRO_IS_CSYMBOL = _libsbml.L3P_AVOGADRO_IS_CSYMBOL

Do not treat 'avogadro' specially—consider it a plain symbol name when parsing text-string formulas.

libsbml.L3P_AVOGADRO_IS_NAME = _libsbml.L3P_AVOGADRO_IS_NAME

Collapse unary minuses where possible.

libsbml.L3P_COLLAPSE_UNARY_MINUS = _libsbml.L3P_COLLAPSE_UNARY_MINUS

Retain unary minuses in the AST representation when parsing text-string formulas.

libsbml.L3P_COMPARE_BUILTINS_CASE_INSENSITIVE = _libsbml.L3P_COMPARE_BUILTINS_CASE_INSENSITIVE

Treat all forms of built-in functions as referencing that function, regardless of the capitalization of that string.

libsbml.L3P_COMPARE_BUILTINS_CASE_SENSITIVE = _libsbml.L3P_COMPARE_BUILTINS_CASE_SENSITIVE

Treat only the all-lower-case form of built-in functions as referencing that function, and all other forms of capitalization of that string as referencing user-defined functions or values.

libsbml.L3P_EXPAND_UNARY_MINUS = _libsbml.L3P_EXPAND_UNARY_MINUS

Parse units in text-string formulas when parsing text-string formulas.

libsbml.L3P_MODULO_IS_PIECEWISE = _libsbml.L3P_MODULO_IS_PIECEWISE
libsbml.L3P_MODULO_IS_REM = _libsbml.L3P_MODULO_IS_REM
libsbml.L3P_NO_UNITS = _libsbml.L3P_NO_UNITS

Recognize 'avogadro' as an SBML Level 3 symbol when parsing text-string formulas.

libsbml.L3P_PARSE_L3V2_FUNCTIONS_AS_GENERIC = _libsbml.L3P_PARSE_L3V2_FUNCTIONS_AS_GENERIC
libsbml.L3P_PARSE_L3V2_FUNCTIONS_DIRECTLY = _libsbml.L3P_PARSE_L3V2_FUNCTIONS_DIRECTLY
libsbml.L3P_PARSE_LOG_AS_ERROR = _libsbml.L3P_PARSE_LOG_AS_ERROR

Collapse unary minuses where possible when parsing text-string formulas.

libsbml.L3P_PARSE_LOG_AS_LN = _libsbml.L3P_PARSE_LOG_AS_LN

Refuse to parse log(x) at all, and set an error message telling the user to use log10(x), ln(x), or log(base, x) instead.

libsbml.L3P_PARSE_LOG_AS_LOG10 = _libsbml.L3P_PARSE_LOG_AS_LOG10

Parse log(x) as the natural logarithm of x.

libsbml.L3P_PARSE_PACKAGE_MATH_AS_GENERIC = _libsbml.L3P_PARSE_PACKAGE_MATH_AS_GENERIC
libsbml.L3P_PARSE_PACKAGE_MATH_DIRECTLY = _libsbml.L3P_PARSE_PACKAGE_MATH_DIRECTLY
libsbml.L3P_PARSE_UNITS = _libsbml.L3P_PARSE_UNITS

Do not recognize units in text-string formulas—treat them as errors.

libsbml.L3PackageOnLowerSBML = _libsbml.L3PackageOnLowerSBML

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.L3SpatialDimensionsUnset = _libsbml.L3SpatialDimensionsUnset

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.L3SubstanceUnitsOnModel = _libsbml.L3SubstanceUnitsOnModel

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.L3TimeUnitsOnModel = _libsbml.L3TimeUnitsOnModel

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.L3V2FastDeprecated = _libsbml.L3V2FastDeprecated

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.L3V2SubstanceUnitsOnModel = _libsbml.L3V2SubstanceUnitsOnModel

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.L3VolumeUnitsOnModel = _libsbml.L3VolumeUnitsOnModel

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.LambdaOnlyAllowedInFunctionDef = _libsbml.LambdaOnlyAllowedInFunctionDef

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.LayoutAttributeRequiredMissing = _libsbml.LayoutAttributeRequiredMissing

layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.LayoutAttributeRequiredMustBeBoolean = _libsbml.LayoutAttributeRequiredMustBeBoolean

layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.LayoutBBoxAllowedAttributes = _libsbml.LayoutBBoxAllowedAttributes

layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.LayoutBBoxAllowedCoreAttributes = _libsbml.LayoutBBoxAllowedCoreAttributes

layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.LayoutBBoxAllowedCoreElements = _libsbml.LayoutBBoxAllowedCoreElements

layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.LayoutBBoxAllowedElements = _libsbml.LayoutBBoxAllowedElements

layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.LayoutBBoxConsistent3DDefinition = _libsbml.LayoutBBoxConsistent3DDefinition

layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.LayoutCBezAllowedAttributes = _libsbml.LayoutCBezAllowedAttributes

layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.LayoutCBezAllowedCoreAttributes = _libsbml.LayoutCBezAllowedCoreAttributes

layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.LayoutCBezAllowedCoreElements = _libsbml.LayoutCBezAllowedCoreElements

layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.LayoutCBezAllowedElements = _libsbml.LayoutCBezAllowedElements

layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.LayoutCGAllowedAttributes = _libsbml.LayoutCGAllowedAttributes

layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.LayoutCGAllowedCoreAttributes = _libsbml.LayoutCGAllowedCoreAttributes

layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.LayoutCGAllowedCoreElements = _libsbml.LayoutCGAllowedCoreElements

layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.LayoutCGAllowedElements = _libsbml.LayoutCGAllowedElements

layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.LayoutCGCompartmentMustRefComp = _libsbml.LayoutCGCompartmentMustRefComp

layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.LayoutCGCompartmentSyntax = _libsbml.LayoutCGCompartmentSyntax

layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.LayoutCGMetaIdRefMustBeIDREF = _libsbml.LayoutCGMetaIdRefMustBeIDREF

layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.LayoutCGMetaIdRefMustReferenceObject = _libsbml.LayoutCGMetaIdRefMustReferenceObject

layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.LayoutCGNoDuplicateReferences = _libsbml.LayoutCGNoDuplicateReferences

layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.LayoutCGOrderMustBeDouble = _libsbml.LayoutCGOrderMustBeDouble

layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.LayoutCurveAllowedAttributes = _libsbml.LayoutCurveAllowedAttributes

layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.LayoutCurveAllowedCoreAttributes = _libsbml.LayoutCurveAllowedCoreAttributes

layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.LayoutCurveAllowedCoreElements = _libsbml.LayoutCurveAllowedCoreElements

layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.LayoutCurveAllowedElements = _libsbml.LayoutCurveAllowedElements

layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.LayoutDimsAllowedAttributes = _libsbml.LayoutDimsAllowedAttributes

layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.LayoutDimsAllowedCoreAttributes = _libsbml.LayoutDimsAllowedCoreAttributes

layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.LayoutDimsAllowedCoreElements = _libsbml.LayoutDimsAllowedCoreElements

layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.LayoutDimsAttributesMustBeDouble = _libsbml.LayoutDimsAttributesMustBeDouble

layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.LayoutDuplicateComponentId = _libsbml.LayoutDuplicateComponentId

layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.LayoutElementNotInNs = _libsbml.LayoutElementNotInNs

layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.LayoutGGAllowedAttributes = _libsbml.LayoutGGAllowedAttributes

layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.LayoutGGAllowedCoreAttributes = _libsbml.LayoutGGAllowedCoreAttributes

layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.LayoutGGAllowedCoreElements = _libsbml.LayoutGGAllowedCoreElements

layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.LayoutGGAllowedElements = _libsbml.LayoutGGAllowedElements

layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.LayoutGGMetaIdRefMustBeIDREF = _libsbml.LayoutGGMetaIdRefMustBeIDREF

layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.LayoutGGMetaIdRefMustReferenceObject = _libsbml.LayoutGGMetaIdRefMustReferenceObject

layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.LayoutGGNoDuplicateReferences = _libsbml.LayoutGGNoDuplicateReferences

layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.LayoutGGReferenceMustRefObject = _libsbml.LayoutGGReferenceMustRefObject

layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.LayoutGGReferenceSyntax = _libsbml.LayoutGGReferenceSyntax

layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.LayoutGOAllowedAttributes = _libsbml.LayoutGOAllowedAttributes

layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.LayoutGOAllowedCoreAttributes = _libsbml.LayoutGOAllowedCoreAttributes

layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.LayoutGOAllowedCoreElements = _libsbml.LayoutGOAllowedCoreElements

layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.LayoutGOAllowedElements = _libsbml.LayoutGOAllowedElements

layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.LayoutGOMetaIdRefMustBeIDREF = _libsbml.LayoutGOMetaIdRefMustBeIDREF

layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.LayoutGOMetaIdRefMustReferenceObject = _libsbml.LayoutGOMetaIdRefMustReferenceObject

layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.LayoutGOMustContainBoundingBox = _libsbml.LayoutGOMustContainBoundingBox

layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.LayoutLayoutAllowedAttributes = _libsbml.LayoutLayoutAllowedAttributes

layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.LayoutLayoutAllowedCoreAttributes = _libsbml.LayoutLayoutAllowedCoreAttributes

layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.LayoutLayoutAllowedElements = _libsbml.LayoutLayoutAllowedElements

layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.LayoutLayoutMustHaveDimensions = _libsbml.LayoutLayoutMustHaveDimensions

layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.LayoutLayoutNameMustBeString = _libsbml.LayoutLayoutNameMustBeString

layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.LayoutLOAddGOAllowedAttribut = _libsbml.LayoutLOAddGOAllowedAttribut

layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.LayoutLOAddGOAllowedElements = _libsbml.LayoutLOAddGOAllowedElements

layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.LayoutLOCompGlyphAllowedAttributes = _libsbml.LayoutLOCompGlyphAllowedAttributes

layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.LayoutLOCompGlyphAllowedElements = _libsbml.LayoutLOCompGlyphAllowedElements

layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.LayoutLOCurveSegsAllowedAttributes = _libsbml.LayoutLOCurveSegsAllowedAttributes

layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.LayoutLOCurveSegsAllowedElements = _libsbml.LayoutLOCurveSegsAllowedElements

layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.LayoutLOCurveSegsNotEmpty = _libsbml.LayoutLOCurveSegsNotEmpty

layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.LayoutLOLayoutsAllowedAttributes = _libsbml.LayoutLOLayoutsAllowedAttributes

layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.LayoutLOLayoutsAllowedElements = _libsbml.LayoutLOLayoutsAllowedElements

layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.LayoutLOLayoutsNotEmpty = _libsbml.LayoutLOLayoutsNotEmpty

layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.LayoutLOReferenceGlyphAllowedAttribs = _libsbml.LayoutLOReferenceGlyphAllowedAttribs

layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.LayoutLOReferenceGlyphAllowedElements = _libsbml.LayoutLOReferenceGlyphAllowedElements

layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.LayoutLORnGlyphAllowedAttributes = _libsbml.LayoutLORnGlyphAllowedAttributes

layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.LayoutLORnGlyphAllowedElements = _libsbml.LayoutLORnGlyphAllowedElements

layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.LayoutLOSpeciesGlyphAllowedAttributes = _libsbml.LayoutLOSpeciesGlyphAllowedAttributes

layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.LayoutLOSpeciesGlyphAllowedElements = _libsbml.LayoutLOSpeciesGlyphAllowedElements

layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.LayoutLOSpeciesRefGlyphAllowedAttribs = _libsbml.LayoutLOSpeciesRefGlyphAllowedAttribs

layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.LayoutLOSpeciesRefGlyphAllowedElements = _libsbml.LayoutLOSpeciesRefGlyphAllowedElements

layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.LayoutLOSpeciesRefGlyphNotEmpty = _libsbml.LayoutLOSpeciesRefGlyphNotEmpty

layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.LayoutLOSubGlyphAllowedAttribs = _libsbml.LayoutLOSubGlyphAllowedAttribs

layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.LayoutLOSubGlyphAllowedElements = _libsbml.LayoutLOSubGlyphAllowedElements

layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.LayoutLOTextGlyphAllowedAttributes = _libsbml.LayoutLOTextGlyphAllowedAttributes

layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.LayoutLOTextGlyphAllowedElements = _libsbml.LayoutLOTextGlyphAllowedElements

layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.LayoutLSegAllowedAttributes = _libsbml.LayoutLSegAllowedAttributes

layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.LayoutLSegAllowedCoreAttributes = _libsbml.LayoutLSegAllowedCoreAttributes

layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.LayoutLSegAllowedCoreElements = _libsbml.LayoutLSegAllowedCoreElements

layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.LayoutLSegAllowedElements = _libsbml.LayoutLSegAllowedElements

layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.LayoutNoEmptyListOfs = _libsbml.LayoutNoEmptyListOfs

layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.LayoutNSUndeclared = _libsbml.LayoutNSUndeclared

layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.LayoutOnlyOneEachListOf = _libsbml.LayoutOnlyOneEachListOf

layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.LayoutOnlyOneLOLayouts = _libsbml.LayoutOnlyOneLOLayouts

layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.LayoutPointAllowedAttributes = _libsbml.LayoutPointAllowedAttributes

layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.LayoutPointAllowedCoreAttributes = _libsbml.LayoutPointAllowedCoreAttributes

layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.LayoutPointAllowedCoreElements = _libsbml.LayoutPointAllowedCoreElements

layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.LayoutPointAttributesMustBeDouble = _libsbml.LayoutPointAttributesMustBeDouble

layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.LayoutREFGAllowedAttributes = _libsbml.LayoutREFGAllowedAttributes

layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.LayoutREFGAllowedCoreAttributes = _libsbml.LayoutREFGAllowedCoreAttributes

layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.LayoutREFGAllowedCoreElements = _libsbml.LayoutREFGAllowedCoreElements

layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.LayoutREFGAllowedElements = _libsbml.LayoutREFGAllowedElements

layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.LayoutREFGGlyphMustRefObject = _libsbml.LayoutREFGGlyphMustRefObject

layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.LayoutREFGGlyphSyntax = _libsbml.LayoutREFGGlyphSyntax

layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.LayoutREFGMetaIdRefMustBeIDREF = _libsbml.LayoutREFGMetaIdRefMustBeIDREF

layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.LayoutREFGMetaIdRefMustReferenceObject = _libsbml.LayoutREFGMetaIdRefMustReferenceObject

layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.LayoutREFGNoDuplicateReferences = _libsbml.LayoutREFGNoDuplicateReferences

layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.LayoutREFGReferenceMustRefObject = _libsbml.LayoutREFGReferenceMustRefObject

layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.LayoutREFGReferenceSyntax = _libsbml.LayoutREFGReferenceSyntax

layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.LayoutREFGRoleSyntax = _libsbml.LayoutREFGRoleSyntax

layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.LayoutRequiredFalse = _libsbml.LayoutRequiredFalse

layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.LayoutRGAllowedAttributes = _libsbml.LayoutRGAllowedAttributes

layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.LayoutRGAllowedCoreAttributes = _libsbml.LayoutRGAllowedCoreAttributes

layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.LayoutRGAllowedCoreElements = _libsbml.LayoutRGAllowedCoreElements

layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.LayoutRGAllowedElements = _libsbml.LayoutRGAllowedElements

layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.LayoutRGMetaIdRefMustBeIDREF = _libsbml.LayoutRGMetaIdRefMustBeIDREF

layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.LayoutRGMetaIdRefMustReferenceObject = _libsbml.LayoutRGMetaIdRefMustReferenceObject

layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.LayoutRGNoDuplicateReferences = _libsbml.LayoutRGNoDuplicateReferences

layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.LayoutRGReactionMustRefReaction = _libsbml.LayoutRGReactionMustRefReaction

layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.LayoutRGReactionSyntax = _libsbml.LayoutRGReactionSyntax

layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.LayoutSGAllowedAttributes = _libsbml.LayoutSGAllowedAttributes

layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.LayoutSGAllowedCoreAttributes = _libsbml.LayoutSGAllowedCoreAttributes

layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.LayoutSGAllowedCoreElements = _libsbml.LayoutSGAllowedCoreElements

layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.LayoutSGAllowedElements = _libsbml.LayoutSGAllowedElements

layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.LayoutSGMetaIdRefMustBeIDREF = _libsbml.LayoutSGMetaIdRefMustBeIDREF

layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.LayoutSGMetaIdRefMustReferenceObject = _libsbml.LayoutSGMetaIdRefMustReferenceObject

layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.LayoutSGNoDuplicateReferences = _libsbml.LayoutSGNoDuplicateReferences

layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.LayoutSGSpeciesMustRefSpecies = _libsbml.LayoutSGSpeciesMustRefSpecies

layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.LayoutSGSpeciesSyntax = _libsbml.LayoutSGSpeciesSyntax

layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.LayoutSIdSyntax = _libsbml.LayoutSIdSyntax

layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.LayoutSRGAllowedAttributes = _libsbml.LayoutSRGAllowedAttributes

layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.LayoutSRGAllowedCoreAttributes = _libsbml.LayoutSRGAllowedCoreAttributes

layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.LayoutSRGAllowedCoreElements = _libsbml.LayoutSRGAllowedCoreElements

layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.LayoutSRGAllowedElements = _libsbml.LayoutSRGAllowedElements

layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.LayoutSRGMetaIdRefMustBeIDREF = _libsbml.LayoutSRGMetaIdRefMustBeIDREF

layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.LayoutSRGMetaIdRefMustReferenceObject = _libsbml.LayoutSRGMetaIdRefMustReferenceObject

layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.LayoutSRGNoDuplicateReferences = _libsbml.LayoutSRGNoDuplicateReferences

layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.LayoutSRGRoleSyntax = _libsbml.LayoutSRGRoleSyntax

layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.LayoutSRGSpeciesGlyphMustRefObject = _libsbml.LayoutSRGSpeciesGlyphMustRefObject

layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.LayoutSRGSpeciesGlyphSyntax = _libsbml.LayoutSRGSpeciesGlyphSyntax

layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.LayoutSRGSpeciesReferenceSyntax = _libsbml.LayoutSRGSpeciesReferenceSyntax

layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.LayoutSRGSpeciesRefMustRefObject = _libsbml.LayoutSRGSpeciesRefMustRefObject

layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.LayoutTGAllowedAttributes = _libsbml.LayoutTGAllowedAttributes

layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.LayoutTGAllowedCoreAttributes = _libsbml.LayoutTGAllowedCoreAttributes

layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.LayoutTGAllowedCoreElements = _libsbml.LayoutTGAllowedCoreElements

layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.LayoutTGAllowedElements = _libsbml.LayoutTGAllowedElements

layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.LayoutTGGraphicalObjectMustRefObject = _libsbml.LayoutTGGraphicalObjectMustRefObject

layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.LayoutTGGraphicalObjectSyntax = _libsbml.LayoutTGGraphicalObjectSyntax

layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.LayoutTGMetaIdRefMustBeIDREF = _libsbml.LayoutTGMetaIdRefMustBeIDREF

layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.LayoutTGMetaIdRefMustReferenceObject = _libsbml.LayoutTGMetaIdRefMustReferenceObject

layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.LayoutTGNoDuplicateReferences = _libsbml.LayoutTGNoDuplicateReferences

layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.LayoutTGOriginOfTextMustRefObject = _libsbml.LayoutTGOriginOfTextMustRefObject

layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.LayoutTGOriginOfTextSyntax = _libsbml.LayoutTGOriginOfTextSyntax

layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.LayoutTGTextMustBeString = _libsbml.LayoutTGTextMustBeString

layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.LayoutUnknownError = _libsbml.LayoutUnknownError

long

layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.LayoutXsiTypeAllowedLocations = _libsbml.LayoutXsiTypeAllowedLocations

layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.LayoutXsiTypeSyntax = _libsbml.LayoutXsiTypeSyntax

layout A value in the enumeration of all the error and warning codes generated by the libSBML “layout” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.LevelPositiveInteger = _libsbml.LevelPositiveInteger

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.LIBSBML_ANNOTATION_NAME_NOT_FOUND = _libsbml.LIBSBML_ANNOTATION_NAME_NOT_FOUND

The existing annotation does not have a top-level element with the given name.

This error is typically returned in situations where the replaceTopLevelAnnotationElement function or the removeTopLevelAnnotationElement function is being used to replace or remove an annotation with a name that does not match the name of any top-level element that is already present in the existing annotation.

libsbml.LIBSBML_ANNOTATION_NS_NOT_FOUND = _libsbml.LIBSBML_ANNOTATION_NS_NOT_FOUND

The existing annotation does not have a top-level element with the given namespace.

This error is typically returned in situations where the replaceTopLevelAnnotationElement function or the removeTopLevelAnnotationElement function is being used to replace or remove an annotation with a namespace that does not match the namespace of any top-level element that is already present in the existing annotation.

libsbml.LIBSBML_CAT_GENERAL_CONSISTENCY = _libsbml.LIBSBML_CAT_GENERAL_CONSISTENCY

Category code for SBMLError diagnostics.

This code has the following meaning: Category of errors that can occur while validating general SBML constructs. With respect to the SBML specification, these concern failures in applying the validation rules numbered 2xxxx in the Level 2 Versions 2 and 3 specifications.

libsbml.LIBSBML_CAT_IDENTIFIER_CONSISTENCY = _libsbml.LIBSBML_CAT_IDENTIFIER_CONSISTENCY

Category code for SBMLError diagnostics.

This code has the following meaning: Category of errors that can occur while validating symbol identifiers in a model. With respect to the SBML specification, these concern failures in applying the validation rules numbered 103xx in the Level 2 Versions 2 and 3 specifications.

libsbml.LIBSBML_CAT_INTERNAL = _libsbml.LIBSBML_CAT_INTERNAL

Category code for errors in the XML layer.

This code has the following meaning: A problem involving the libSBML software itself or the underlying XML parser. This almost certainly indicates a software defect (i.e., bug) in libSBML. Please report instances of this to the libSBML developers.

libsbml.LIBSBML_CAT_INTERNAL_CONSISTENCY = _libsbml.LIBSBML_CAT_INTERNAL_CONSISTENCY

Category code for SBMLError diagnostics.

This code has the following meaning: Category of errors that can occur while validating libSBML's internal representation of SBML constructs. (These are tests performed by libSBML and do not have equivalent SBML validation rules.)

libsbml.LIBSBML_CAT_MATHML_CONSISTENCY = _libsbml.LIBSBML_CAT_MATHML_CONSISTENCY

Category code for SBMLError diagnostics.

This code has the following meaning: Category of errors that can occur while validating MathML formulas in a model. With respect to the SBML specification, these concern failures in applying the validation rules numbered 102xx in the Level 2 Versions 2 and 3 specifications.

libsbml.LIBSBML_CAT_MODELING_PRACTICE = _libsbml.LIBSBML_CAT_MODELING_PRACTICE

Category code for SBMLError diagnostics.

This code has the following meaning: Category of warnings about recommended good practices involving SBML and computational modeling. (These are tests performed by libSBML and do not have equivalent SBML validation rules.)

libsbml.LIBSBML_CAT_OVERDETERMINED_MODEL = _libsbml.LIBSBML_CAT_OVERDETERMINED_MODEL

Category code for SBMLError diagnostics.

This code has the following meaning: Error in the system of equations in the model: the system is overdetermined, therefore violating a tenet of proper SBML. With respect to the SBML specification, this is validation rule #10601 in the SBML Level 2 Versions 2 and 3 specifications.

libsbml.LIBSBML_CAT_SBML = _libsbml.LIBSBML_CAT_SBML

Category code for errors in the XML layer.

This code has the following meaning: General SBML error not falling into another category below.

libsbml.LIBSBML_CAT_SBML_COMPATIBILITY = _libsbml.LIBSBML_CAT_SBML_COMPATIBILITY

Category code for SBMLError diagnostics.

This code has the following meaning: Category of errors that can only occur during attempted translation from one Level/Version of SBML to another.

libsbml.LIBSBML_CAT_SBML_L1_COMPAT = _libsbml.LIBSBML_CAT_SBML_L1_COMPAT

Category code for SBMLError diagnostics.

This code has the following meaning: General SBML error not falling into another category below.

This code has the following meaning: Category of errors that can only occur during attempted translation from one Level/Version of SBML to another. This particular category applies to errors encountered while trying to convert a model from SBML Level 2 to SBML Level 1.

libsbml.LIBSBML_CAT_SBML_L2V1_COMPAT = _libsbml.LIBSBML_CAT_SBML_L2V1_COMPAT

Category code for SBMLError diagnostics.

This code has the following meaning: Category of errors that can only occur during attempted translation from one Level/Version of SBML to another. This particular category applies to errors encountered while trying to convert a model to SBML Level 2 Version 1.

libsbml.LIBSBML_CAT_SBML_L2V2_COMPAT = _libsbml.LIBSBML_CAT_SBML_L2V2_COMPAT

Category code for SBMLError diagnostics.

This code has the following meaning: Category of errors that can only occur during attempted translation from one Level/Version of SBML to another. This particular category applies to errors encountered while trying to convert a model to SBML Level 2 Version 2.

libsbml.LIBSBML_CAT_SBML_L2V3_COMPAT = _libsbml.LIBSBML_CAT_SBML_L2V3_COMPAT

Category code for SBMLError diagnostics.

This code has the following meaning: Category of errors that can only occur during attempted translation from one Level/Version of SBML to another. This particular category applies to errors encountered while trying to convert a model to SBML Level 2 Version 3.

libsbml.LIBSBML_CAT_SBML_L2V4_COMPAT = _libsbml.LIBSBML_CAT_SBML_L2V4_COMPAT

Category code for SBMLError diagnostics.

This code has the following meaning: Category of errors that can only occur during attempted translation from one Level/Version of SBML to another. This particular category applies to errors encountered while trying to convert a model to SBML Level 2 Version 4.

libsbml.LIBSBML_CAT_SBML_L3V1_COMPAT = _libsbml.LIBSBML_CAT_SBML_L3V1_COMPAT

Category code for SBMLError diagnostics.

This code has the following meaning: Category of errors that can only occur during attempted translation from one Level/Version of SBML to another. This particular category applies to errors encountered while trying to convert a model to SBML Level 3 Version 1.

libsbml.LIBSBML_CAT_SBML_L3V2_COMPAT = _libsbml.LIBSBML_CAT_SBML_L3V2_COMPAT

Category code for SBMLError diagnostics.

This code has the following meaning: Category of errors that can only occur during attempted translation from one Level/Version of SBML to another. This particular category applies to errors encountered while trying to convert a model to SBML Level 3 Version 1.

libsbml.LIBSBML_CAT_SBO_CONSISTENCY = _libsbml.LIBSBML_CAT_SBO_CONSISTENCY

Category code for SBMLError diagnostics.

This code has the following meaning: Category of errors that can occur while validating SBO identifiers in a model. With respect to the SBML specification, these concern failures in applying the validation rules numbered 107xx in the Level 2 Versions 2 and 3 specifications.

libsbml.LIBSBML_CAT_SYSTEM = _libsbml.LIBSBML_CAT_SYSTEM

Category code for errors in the XML layer.

This code has the following meaning: A problem reported by the operating system, such as an inability to read or write a file. This indicates something that is not a program error but is outside of the control of libSBML.

libsbml.LIBSBML_CAT_UNITS_CONSISTENCY = _libsbml.LIBSBML_CAT_UNITS_CONSISTENCY

Category code for SBMLError diagnostics.

This code has the following meaning: Category of errors that can occur while validating the units of measurement on quantities in a model. With respect to the SBML specification, these concern failures in applying the validation rules numbered 105xx in the Level 2 Versions 2 and 3 specifications.

libsbml.LIBSBML_CAT_XML = _libsbml.LIBSBML_CAT_XML

Category code for errors in the XML layer.

This code has the following meaning: A problem in the XML content itself. This usually arises from malformed XML or the use of constructs not permitted in SBML.

libsbml.LIBSBML_CONV_CONVERSION_NOT_AVAILABLE = _libsbml.LIBSBML_CONV_CONVERSION_NOT_AVAILABLE

One of the possible libSBML package operation return codes.

This code has the following meaning: conversion with the given properties is not yet available.

libsbml.LIBSBML_CONV_INVALID_SRC_DOCUMENT = _libsbml.LIBSBML_CONV_INVALID_SRC_DOCUMENT

One of the possible libSBML package operation return codes.

This code has the following meaning: The document on which conversion is being requested is invalid and the requested conversion cannot be performed. This error is typically returned when a conversion routine has been given an invalid target document or the conversion requires a certain degree of validity that is not present in the document. To avoid this error use the SBMLDocument#checkConsistency() function to find and resolve errors before passing the document to a conversion method.

libsbml.LIBSBML_CONV_INVALID_TARGET_NAMESPACE = _libsbml.LIBSBML_CONV_INVALID_TARGET_NAMESPACE

One of the possible libSBML package operation return codes.

This code has the following meaning: while attempting to convert the SBML document using SBMLLevelVersionConverter#convert() or related methods, the target namespace has been found to be invalid or unset. (The function SBMLNamespaces#isValidCombination() may be useful in detecting this situation and preventing the error.)

libsbml.LIBSBML_CONV_PKG_CONSIDERED_UNKNOWN = _libsbml.LIBSBML_CONV_PKG_CONSIDERED_UNKNOWN

The package that is being stripped is not an enabled package but considered by libSBML to be an unrecognized package.

This error is typically returned when calling the StripPackage converter requesting that a package for which code is not available be stripped. Thus the containing document will not be altered as the elements and attributes for this package are stored as unknown package information and will be written out as such.

libsbml.LIBSBML_CONV_PKG_CONVERSION_NOT_AVAILABLE = _libsbml.LIBSBML_CONV_PKG_CONVERSION_NOT_AVAILABLE

One of the possible libSBML package operation return codes.

This code has the following meaning: conversions involving SBML Level 3 packages are not available in the given libSBML method. This error is typically returned when calling a converter that does not have the functionality to deal with SBML packages. To avoid this error, ensure that the requested ConversionProperties specifies packages.

libsbml.LIBSBML_DEPRECATED_ATTRIBUTE = _libsbml.LIBSBML_DEPRECATED_ATTRIBUTE

The attribute that is the subject of this operation has been deprecated for the combination of SBML Level and Version for the underlying object.

libsbml.LIBSBML_DOTTED_VERSION = _libsbml.LIBSBML_DOTTED_VERSION

A version string of the form "1.2.3".

The numeric version as a string: version 1.2.3 becomes "10203".

libsbml.LIBSBML_DUPLICATE_ANNOTATION_NS = _libsbml.LIBSBML_DUPLICATE_ANNOTATION_NS

There already exists a top level annotation with the same namespace as annoation being appended.

This error is typically returned in situations where the appendAnnotation function is being used to add an annotation that has a namespace that is already present in the existing annotation.

libsbml.LIBSBML_DUPLICATE_OBJECT_ID = _libsbml.LIBSBML_DUPLICATE_OBJECT_ID

One of the possible libSBML operation return codes.

This code has the following meaning: There already exists an object with this identifier in the context where this operation is being attempted. This error is typically returned in situations where SBML object identifiers must be unique, such as attempting to add two species with the same identifier to a model.

libsbml.LIBSBML_INDEX_EXCEEDS_SIZE = _libsbml.LIBSBML_INDEX_EXCEEDS_SIZE

One of the possible libSBML operation return codes.

This code has the following meaning: An index parameter exceeded the bounds of a data array or other collection used in the operation. This return value is typically returned by methods that take index numbers to refer to lists of objects, when the caller has provided an index that exceeds the bounds of the list. LibSBML provides methods for checking the size of list/sequence/collection structures, and callers should verify the sizes before calling methods that take index numbers.

libsbml.LIBSBML_INVALID_ATTRIBUTE_VALUE = _libsbml.LIBSBML_INVALID_ATTRIBUTE_VALUE

One of the possible libSBML operation return codes.

This code has the following meaning: A value passed as an argument to the method is not of a type that is valid for the operation or kind of object involved. For example, this return code is used when a calling program attempts to set an SBML object identifier to a string whose syntax does not conform to the SBML identifier syntax.

libsbml.LIBSBML_INVALID_OBJECT = _libsbml.LIBSBML_INVALID_OBJECT

One of the possible libSBML operation return codes.

This code has the following meaning: The object passed as an argument to the method is not of a type that is valid for the operation or kind of object involved. For example, handing an invalidly-constructed ASTNode to a method expecting an ASTNode will result in this error.

libsbml.LIBSBML_INVALID_XML_OPERATION = _libsbml.LIBSBML_INVALID_XML_OPERATION

One of the possible libSBML operation return codes.

This code has the following meaning: The XML operation attempted is not valid for the object or context involved. This error is typically returned by the XML interface layer of libSBML, when a calling program attempts to construct or manipulate XML in an invalid way.

libsbml.LIBSBML_LEVEL_MISMATCH = _libsbml.LIBSBML_LEVEL_MISMATCH

One of the possible libSBML operation return codes.

This code has the following meaning: The SBML Level associated with the object does not match the Level of the parent object. This error can happen when an SBML component such as a species or compartment object is created outside of a model and a calling program then attempts to add the object to a model that has a different SBML Level defined.

libsbml.LIBSBML_MISSING_METAID = _libsbml.LIBSBML_MISSING_METAID

The requested action cannot be performed as the target object does not have the "metaid" attribute set.

libsbml.LIBSBML_NAMESPACES_MISMATCH = _libsbml.LIBSBML_NAMESPACES_MISMATCH

One of the possible libSBML operation return codes.

This code has the following meaning: The operation attempt could not be performed because the object(s) involved have mismatched XML namespaces for SBML Level/Versions. This typically means the properties of the SBMLNamespaces objects possessed by the SBML objects do not correspond in some way.

libsbml.LIBSBML_OPERATION_FAILED = _libsbml.LIBSBML_OPERATION_FAILED

One of the possible libSBML operation return codes.

This code has the following meaning: The requested action could not be performed. This can occur in a variety of contexts, such as passing a null object as a parameter in a situation where it does not make sense to permit a null object.

libsbml.LIBSBML_OPERATION_SUCCESS = _libsbml.LIBSBML_OPERATION_SUCCESS

One of the possible libSBML operation return codes.

This code has the following meaning: The operation was successful.

libsbml.LIBSBML_OVERRIDE_DISABLED = _libsbml.LIBSBML_OVERRIDE_DISABLED

Severity override code for errors logged in the XML layer.

XMLErrorLog can be configured whether to log errors or not log them. This code has the following meaning: log errors in the error log, as normal.

libsbml.LIBSBML_OVERRIDE_DONT_LOG = _libsbml.LIBSBML_OVERRIDE_DONT_LOG

Severity override code for errors logged in the XML layer.

XMLErrorLog can be configured whether to log errors or not log them. This code has the following meaning: disable all error logging.

libsbml.LIBSBML_OVERRIDE_ERROR = _libsbml.LIBSBML_OVERRIDE_ERROR

Severity override code for errors logged in the XML layer.

XMLErrorLog can be configured whether to log errors or not log them. This code has the following meaning: log all errors as errors instead of warnings.

libsbml.LIBSBML_OVERRIDE_WARNING = _libsbml.LIBSBML_OVERRIDE_WARNING

Severity override code for errors logged in the XML layer.

XMLErrorLog can be configured whether to log errors or not log them. This code has the following meaning: log all errors as warnings instead of actual errors.

libsbml.LIBSBML_PKG_CONFLICT = _libsbml.LIBSBML_PKG_CONFLICT

One of the possible libSBML package operation return codes.

This code has the following meaning: another SBML package extension for the same URI has already been registered. This error is typically returned when adding a SBML package extension to the SBMLExtensionRegistry. To avoid this error, ensure that SBML package extensions are only registered once.

libsbml.LIBSBML_PKG_CONFLICTED_VERSION = _libsbml.LIBSBML_PKG_CONFLICTED_VERSION

One of the possible libSBML package operation return codes.

This code has the following meaning: another version of the required package extension has already been enabled in the target SBase object, or enabled in the model to/in which the target object to be added/contained. This error is typically returned when adding an object of some SBase derived class with the required package to other SBase derived object, or when enabling the required package in the target object. To avoid this error, the conflict of versions need to be avoided.

libsbml.LIBSBML_PKG_DISABLED = _libsbml.LIBSBML_PKG_DISABLED

One of the possible libSBML package operation return codes.

This code has the following meaning: The required package extension is disabled. This error is typically returned when creating an object of SBase derived class with the required package, creating an object of SBMLNamespaces or its derived class with the required package, or invoking functions depending on the required package. To avoid this error, the library of the required package needs to be enabled.

libsbml.LIBSBML_PKG_UNKNOWN = _libsbml.LIBSBML_PKG_UNKNOWN

One of the possible libSBML package operation return codes.

This code has the following meaning: the required package extension is unknown. This error is typically returned when creating an object of SBase derived class with the required package, creating an object of SBMLNamespaces or its derived class with the required package, or invoking functions depending on the required package. To avoid this error, the library of the required package needs to be linked.

libsbml.LIBSBML_PKG_UNKNOWN_VERSION = _libsbml.LIBSBML_PKG_UNKNOWN_VERSION

One of the possible libSBML package operation return codes.

This code has the following meaning: The required version of the package extension is unknown. This error is typically returned when creating an object of SBase derived class with the required package, creating an object of SBMLNamespaces or its derived class with the required package, or invoking functions depending on the required package. This error may be avoided by updating the library of the required package to be linked.

libsbml.LIBSBML_PKG_VERSION_MISMATCH = _libsbml.LIBSBML_PKG_VERSION_MISMATCH

One of the possible libSBML package operation return codes.

This code has the following meaning: the Version of the package extension within the SBML Level and version associated with the object does not match the Version of the parent object. This error can happen when an SBML component object is created outside of a model, and a calling program then attempts to add the object to a model that has a different SBML Level+Version+Package Version combination.

libsbml.LIBSBML_SEV_ERROR = _libsbml.LIBSBML_SEV_ERROR

Severity code for errors in the XML layer.

This code has the following meaning: The error object represents a serious error. The application may continue running but it is unlikely to be able to continue processing the same XML file or data stream.

libsbml.LIBSBML_SEV_FATAL = _libsbml.LIBSBML_SEV_FATAL

Severity code for errors in the XML layer.

This code has the following meaning: A serious error occurred, such as an out-of-memory condition, and the software should terminate immediately.

libsbml.LIBSBML_SEV_INFO = _libsbml.LIBSBML_SEV_INFO

Severity code for errors in the XML layer.

This code has the following meaning: The error is actually informational and not necessarily a serious problem.

libsbml.LIBSBML_SEV_WARNING = _libsbml.LIBSBML_SEV_WARNING

Severity code for errors in the XML layer.

This code has the following meaning: The error object represents a problem that is not serious enough to necessarily stop the problem, but applications should take note of the problem and evaluate what its implications may be.

libsbml.LIBSBML_UNEXPECTED_ATTRIBUTE = _libsbml.LIBSBML_UNEXPECTED_ATTRIBUTE

One of the possible libSBML operation return codes.

This code has the following meaning: The attribute that is the subject of this operation is not valid for the combination of SBML Level and Version for the underlying object. This can happen because libSBML strives to offer a uniform API for all SBML Levels and Versions, but some object attributes and elements are not defined for all SBML Levels and Versions. Calling programs are expected to be aware of which object structures they are working with, but when errors of this kind occur, they are reported using this return value.

libsbml.LIBSBML_USE_ID_ATTRIBUTE_FUNCTION = _libsbml.LIBSBML_USE_ID_ATTRIBUTE_FUNCTION

For SBML Level 3 Version 2, use the IdAttribute functions.

libsbml.LIBSBML_VERSION = _libsbml.LIBSBML_VERSION

The version as an integer: version 1.2.3 becomes 10203.

Since the major number comes first, the overall number will always increase when a new libSBML is released, making it easy to use less-than and greater-than comparisons when testing versions numbers.

libsbml.LIBSBML_VERSION_MISMATCH = _libsbml.LIBSBML_VERSION_MISMATCH

One of the possible libSBML operation return codes.

This code has the following meaning: The SBML Version within the SBML Level associated with the object does not match the Version of the parent object. This error can happen when an SBML component such as a species or compartment object is created outside of a model and a calling program then attempts to add the object to a model that has a different SBML Level+Version combination.

libsbml.LIBSBML_VERSION_STRING = _libsbml.LIBSBML_VERSION_STRING
libsbml.LibSBMLAdditionalCodesLowerBound = _libsbml.LibSBMLAdditionalCodesLowerBound

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.LocalParameterShadowsId = _libsbml.LocalParameterShadowsId

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.LocalParameterShadowsSpecies = _libsbml.LocalParameterShadowsSpecies

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.MathMLElementNotSupported = _libsbml.MathMLElementNotSupported

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.MathResultMustBeNumeric = _libsbml.MathResultMustBeNumeric

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.MetaIdNotValidAttribute = _libsbml.MetaIdNotValidAttribute

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.MissingAnnotationNamespace = _libsbml.MissingAnnotationNamespace

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.MissingEventAssignment = _libsbml.MissingEventAssignment

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.MissingMathElementNotSupported = _libsbml.MissingMathElementNotSupported

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.MissingModel = _libsbml.MissingModel

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.MissingOrInconsistentLevel = _libsbml.MissingOrInconsistentLevel

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.MissingOrInconsistentVersion = _libsbml.MissingOrInconsistentVersion

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.MissingParticipantsNotSupported = _libsbml.MissingParticipantsNotSupported

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.MissingSpeciesCompartment = _libsbml.MissingSpeciesCompartment

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.MissingTriggerElementNotSupported = _libsbml.MissingTriggerElementNotSupported

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.MissingTriggerInEvent = _libsbml.MissingTriggerInEvent

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.MissingXMLAttributeValue = _libsbml.MissingXMLAttributeValue

A value in the enumeration of all the error and warning codes returned by the XML layer in libSBML.

Please consult the documentation for XMLError for an explanation of the meaning of this particular error code.

libsbml.MissingXMLDecl = _libsbml.MissingXMLDecl

A value in the enumeration of all the error and warning codes returned by the XML layer in libSBML.

Please consult the documentation for XMLError for an explanation of the meaning of this particular error code.

libsbml.MissingXMLElements = _libsbml.MissingXMLElements

A value in the enumeration of all the error and warning codes returned by the XML layer in libSBML.

Please consult the documentation for XMLError for an explanation of the meaning of this particular error code.

libsbml.MissingXMLEncoding = _libsbml.MissingXMLEncoding

A value in the enumeration of all the error and warning codes returned by the XML layer in libSBML.

Please consult the documentation for XMLError for an explanation of the meaning of this particular error code.

libsbml.MissingXMLRequiredAttribute = _libsbml.MissingXMLRequiredAttribute

A value in the enumeration of all the error and warning codes returned by the XML layer in libSBML.

Please consult the documentation for XMLError for an explanation of the meaning of this particular error code.

libsbml.MODEL_QUALIFIER = _libsbml.MODEL_QUALIFIER

One of the possible MIRIAM annotation types used by CVTerm.

libsbml.ModelSBOBranchChangedBeyondL2v2 = _libsbml.ModelSBOBranchChangedBeyondL2v2

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.ModelSBOBranchChangedBeyondL2v3 = _libsbml.ModelSBOBranchChangedBeyondL2v3

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.ModelSBOBranchChangedInL2v4 = _libsbml.ModelSBOBranchChangedInL2v4

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.ModelSBOBranchChangedInL3v1 = _libsbml.ModelSBOBranchChangedInL3v1

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.MULTI_BINDING_STATUS_BOUND = _libsbml.MULTI_BINDING_STATUS_BOUND

multi A value in an enumeration defined by the libSBML “multi” extension to implement functionality for the SBML Level 3 Multistate, Multicomponent and Multicompartment Species package.

libsbml.MULTI_BINDING_STATUS_EITHER = _libsbml.MULTI_BINDING_STATUS_EITHER

multi A value in an enumeration defined by the libSBML “multi” extension to implement functionality for the SBML Level 3 Multistate, Multicomponent and Multicompartment Species package.

libsbml.MULTI_BINDING_STATUS_UNBOUND = _libsbml.MULTI_BINDING_STATUS_UNBOUND

multi A value in an enumeration defined by the libSBML “multi” extension to implement functionality for the SBML Level 3 Multistate, Multicomponent and Multicompartment Species package.

libsbml.MULTI_BINDING_STATUS_UNKNOWN = _libsbml.MULTI_BINDING_STATUS_UNKNOWN

multi A value in an enumeration defined by the libSBML “multi” extension to implement functionality for the SBML Level 3 Multistate, Multicomponent and Multicompartment Species package.

libsbml.MULTI_RELATION_AND = _libsbml.MULTI_RELATION_AND

multi A value in an enumeration defined by the libSBML “multi” extension to implement functionality for the SBML Level 3 Multistate, Multicomponent and Multicompartment Species package.

libsbml.MULTI_RELATION_NOT = _libsbml.MULTI_RELATION_NOT

multi A value in an enumeration defined by the libSBML “multi” extension to implement functionality for the SBML Level 3 Multistate, Multicomponent and Multicompartment Species package.

libsbml.MULTI_RELATION_OR = _libsbml.MULTI_RELATION_OR

multi A value in an enumeration defined by the libSBML “multi” extension to implement functionality for the SBML Level 3 Multistate, Multicomponent and Multicompartment Species package.

libsbml.MULTI_RELATION_UNKNOWN = _libsbml.MULTI_RELATION_UNKNOWN

multi A value in an enumeration defined by the libSBML “multi” extension to implement functionality for the SBML Level 3 Multistate, Multicomponent and Multicompartment Species package.

libsbml.MultipleAnnotations = _libsbml.MultipleAnnotations

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.MultipleAssignmentOrRateRules = _libsbml.MultipleAssignmentOrRateRules

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.MultipleEventAssignmentsForId = _libsbml.MultipleEventAssignmentsForId

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.MultipleInitAssignments = _libsbml.MultipleInitAssignments

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.MultiplierNotValidAttribute = _libsbml.MultiplierNotValidAttribute

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.MultSpeciesSameTypeInCompartment = _libsbml.MultSpeciesSameTypeInCompartment

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.NameNotValidAttribute = _libsbml.NameNotValidAttribute

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.NeedCompartmentIfHaveSpecies = _libsbml.NeedCompartmentIfHaveSpecies

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.NestedAnnotationNotAllowed = _libsbml.NestedAnnotationNotAllowed

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.NoBodyInFunctionDef = _libsbml.NoBodyInFunctionDef

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.NoCompartmentOutsideInL3v1 = _libsbml.NoCompartmentOutsideInL3v1

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.NoCompartmentTypeInL1 = _libsbml.NoCompartmentTypeInL1

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.NoCompartmentTypeInL2v1 = _libsbml.NoCompartmentTypeInL2v1

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.NoCompartmentTypeInL3v1 = _libsbml.NoCompartmentTypeInL3v1

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.NoConcentrationInZeroD = _libsbml.NoConcentrationInZeroD

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.NoConstraintsInL1 = _libsbml.NoConstraintsInL1

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.NoConstraintsInL2v1 = _libsbml.NoConstraintsInL2v1

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.NoDelayedEventAssignmentInL2v1 = _libsbml.NoDelayedEventAssignmentInL2v1

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.NoDelayedEventAssignmentInL2v2 = _libsbml.NoDelayedEventAssignmentInL2v2

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.NoDelayedEventAssignmentInL2v3 = _libsbml.NoDelayedEventAssignmentInL2v3

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.NoEventsInL1 = _libsbml.NoEventsInL1

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.NoEventTimeUnitsInL2v3 = _libsbml.NoEventTimeUnitsInL2v3

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.NoEventTimeUnitsInL2v4 = _libsbml.NoEventTimeUnitsInL2v4

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.NoEventTimeUnitsInL3v1 = _libsbml.NoEventTimeUnitsInL3v1

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.NoFancyStoichiometryMathInL1 = _libsbml.NoFancyStoichiometryMathInL1

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.NoFunctionDefinitionsInL1 = _libsbml.NoFunctionDefinitionsInL1

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.NoIdOnSpeciesReferenceInL2v1 = _libsbml.NoIdOnSpeciesReferenceInL2v1

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.NoInitialAssignmentsInL1 = _libsbml.NoInitialAssignmentsInL1

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.NoInitialAssignmentsInL2v1 = _libsbml.NoInitialAssignmentsInL2v1

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.NoKineticLawSubstanceUnitsInL2v2 = _libsbml.NoKineticLawSubstanceUnitsInL2v2

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.NoKineticLawSubstanceUnitsInL2v3 = _libsbml.NoKineticLawSubstanceUnitsInL2v3

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.NoKineticLawSubstanceUnitsInL2v4 = _libsbml.NoKineticLawSubstanceUnitsInL2v4

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.NoKineticLawSubstanceUnitsInL3v1 = _libsbml.NoKineticLawSubstanceUnitsInL3v1

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.NoKineticLawTimeUnitsInL2v2 = _libsbml.NoKineticLawTimeUnitsInL2v2

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.NoKineticLawTimeUnitsInL2v3 = _libsbml.NoKineticLawTimeUnitsInL2v3

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.NoKineticLawTimeUnitsInL2v4 = _libsbml.NoKineticLawTimeUnitsInL2v4

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.NoKineticLawTimeUnitsInL3v1 = _libsbml.NoKineticLawTimeUnitsInL3v1

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.NonBoundarySpeciesAssignedAndUsed = _libsbml.NonBoundarySpeciesAssignedAndUsed

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.NonConstantLocalParameter = _libsbml.NonConstantLocalParameter

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.NonConstantSpeciesUsed = _libsbml.NonConstantSpeciesUsed

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.NoNon3DCompartmentsInL1 = _libsbml.NoNon3DCompartmentsInL1

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.NoNonIntegerStoichiometryInL1 = _libsbml.NoNonIntegerStoichiometryInL1

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.NonPersistentNotSupported = _libsbml.NonPersistentNotSupported

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.NoReactantsOrProducts = _libsbml.NoReactantsOrProducts

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.NoSBOTermsInL1 = _libsbml.NoSBOTermsInL1

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.NoSBOTermsInL2v1 = _libsbml.NoSBOTermsInL2v1

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.NoSpatialUnitsInZeroD = _libsbml.NoSpatialUnitsInZeroD

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.NoSpeciesSpatialSizeUnitsInL1 = _libsbml.NoSpeciesSpatialSizeUnitsInL1

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.NoSpeciesSpatialSizeUnitsInL2v3 = _libsbml.NoSpeciesSpatialSizeUnitsInL2v3

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.NoSpeciesSpatialSizeUnitsInL2v4 = _libsbml.NoSpeciesSpatialSizeUnitsInL2v4

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.NoSpeciesSpatialSizeUnitsInL3v1 = _libsbml.NoSpeciesSpatialSizeUnitsInL3v1

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.NoSpeciesTypeInL2v1 = _libsbml.NoSpeciesTypeInL2v1

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.NoSpeciesTypeInL3v1 = _libsbml.NoSpeciesTypeInL3v1

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.NoSpeciesTypesInL1 = _libsbml.NoSpeciesTypesInL1

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.NoStoichiometryMathInL3v1 = _libsbml.NoStoichiometryMathInL3v1

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.NotesContainsDOCTYPE = _libsbml.NotesContainsDOCTYPE

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.NotesContainsXMLDecl = _libsbml.NotesContainsXMLDecl

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.NotesNotInXHTMLNamespace = _libsbml.NotesNotInXHTMLNamespace

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.NoTimeSymbolInFunctionDef = _libsbml.NoTimeSymbolInFunctionDef

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.NotSchemaConformant = _libsbml.NotSchemaConformant

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.NotUTF8 = _libsbml.NotUTF8

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.NoUnitMultipliersOrOffsetsInL1 = _libsbml.NoUnitMultipliersOrOffsetsInL1

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.NoUnitOffsetInL2v2 = _libsbml.NoUnitOffsetInL2v2

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.NoUnitOffsetInL2v3 = _libsbml.NoUnitOffsetInL2v3

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.NoUnitOffsetInL2v4 = _libsbml.NoUnitOffsetInL2v4

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.NoUnitOffsetInL3v1 = _libsbml.NoUnitOffsetInL3v1

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.NoUnitsOnCompartment = _libsbml.NoUnitsOnCompartment

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.NumericOpsNeedNumericArgs = _libsbml.NumericOpsNeedNumericArgs

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.OBJECTIVE_TYPE_MAXIMIZE = _libsbml.OBJECTIVE_TYPE_MAXIMIZE

fbc One of the possible FluxBound operation types.

fbc One of the possible Objective types.

The FluxBound class is part of the SBML Level 3 Flux Balanced Constraints package. Its purpose is to to hold a single equality or inequality that represents the maximum or minimum value a reaction flux can obtain at steady state. One of the attributes of FluxBound is "operation". This code is one of the possible values of the "operation" attribute. The possible legal values are less than or equal to, greater than or equal to, or equal to. The additional two options "less than" and "greater than" are not legal values for the FluxBound "operation" attribute, but are provided to allow backwards compatibility with an earlier version of the draft specification. long

The Objective class is part of the SBML Level 3 Flux Balanced Constraints package. Its purpose is to represent the so-called objective function, which generally consist of a linear combination ofmodel variables (fluxes) and a sense (direction). The Objective class has a "type" attribute, and the present code is one of possible type values.

libsbml.OBJECTIVE_TYPE_MINIMIZE = _libsbml.OBJECTIVE_TYPE_MINIMIZE

fbc One of the possible Objective types.

The Objective class is part of the SBML Level 3 Flux Balanced Constraints package. Its purpose is to represent the so-called objective function, which generally consist of a linear combination ofmodel variables (fluxes) and a sense (direction). The Objective class has a "type" attribute, and the present code is one of possible type values.

libsbml.OBJECTIVE_TYPE_UNKNOWN = _libsbml.OBJECTIVE_TYPE_UNKNOWN

fbc One of the possible Objective types.

The Objective class is part of the SBML Level 3 Flux Balanced Constraints package. Its purpose is to represent the so-called objective function, which generally consist of a linear combination ofmodel variables (fluxes) and a sense (direction). The Objective class has a "type" attribute, and the present code is one of possible type values.

libsbml.ObseleteSBOTerm = _libsbml.ObseleteSBOTerm

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.OffsetNoLongerValid = _libsbml.OffsetNoLongerValid

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.OffsetNotValidAttribute = _libsbml.OffsetNotValidAttribute

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.OneDimensionalCompartmentUnits = _libsbml.OneDimensionalCompartmentUnits

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.OneListOfEventAssignmentsPerEvent = _libsbml.OneListOfEventAssignmentsPerEvent

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.OneListOfPerKineticLaw = _libsbml.OneListOfPerKineticLaw

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.OneListOfUnitsPerUnitDef = _libsbml.OneListOfUnitsPerUnitDef

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.OneMathElementPerConstraint = _libsbml.OneMathElementPerConstraint

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.OneMathElementPerFunc = _libsbml.OneMathElementPerFunc

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.OneMathElementPerInitialAssign = _libsbml.OneMathElementPerInitialAssign

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.OneMathElementPerRule = _libsbml.OneMathElementPerRule

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.OneMathPerDelay = _libsbml.OneMathPerDelay

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.OneMathPerEventAssignment = _libsbml.OneMathPerEventAssignment

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.OneMathPerKineticLaw = _libsbml.OneMathPerKineticLaw

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.OneMathPerPriority = _libsbml.OneMathPerPriority

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.OneMathPerTrigger = _libsbml.OneMathPerTrigger

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.OneMessageElementPerConstraint = _libsbml.OneMessageElementPerConstraint

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.OneOfEachListOf = _libsbml.OneOfEachListOf

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.OneSubElementPerReaction = _libsbml.OneSubElementPerReaction

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.OnlyCiInsideBVar = _OnlyCiInsideBVar

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.OnlyCompartmentsInListOfCompartments = _libsbml.OnlyCompartmentsInListOfCompartments

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.OnlyConstraintsInListOfConstraints = _libsbml.OnlyConstraintsInListOfConstraints

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.OnlyEventAssignInListOfEventAssign = _libsbml.OnlyEventAssignInListOfEventAssign

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.OnlyEventsInListOfEvents = _libsbml.OnlyEventsInListOfEvents

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.OnlyFuncDefsInListOfFuncDefs = _libsbml.OnlyFuncDefsInListOfFuncDefs

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.OnlyInitAssignsInListOfInitAssigns = _libsbml.OnlyInitAssignsInListOfInitAssigns

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.OnlyLocalParamsInListOfLocalParams = _libsbml.OnlyLocalParamsInListOfLocalParams

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.OnlyOneDelayPerEvent = _libsbml.OnlyOneDelayPerEvent

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.OnlyOneNotesElementAllowed = _libsbml.OnlyOneNotesElementAllowed

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.OnlyOnePriorityPerEvent = _libsbml.OnlyOnePriorityPerEvent

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.OnlyParametersInListOfParameters = _libsbml.OnlyParametersInListOfParameters

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.OnlyReactionsInListOfReactions = _libsbml.OnlyReactionsInListOfReactions

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.OnlyRulesInListOfRules = _libsbml.OnlyRulesInListOfRules

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.OnlySpeciesInListOfSpecies = _libsbml.OnlySpeciesInListOfSpecies

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.OnlyUnitDefsInListOfUnitDefs = _libsbml.OnlyUnitDefsInListOfUnitDefs

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.OnlyUnitsInListOfUnits = _libsbml.OnlyUnitsInListOfUnits

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.OperationInterrupted = _OperationInterrupted

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.OpsNeedCorrectNumberOfArgs = _libsbml.OpsNeedCorrectNumberOfArgs

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.OR_ASSOCIATION = _libsbml.OR_ASSOCIATION

fbc One of the possible Association types.

The Association class is not part of the official SBML Level 3 Flux Balance Constraints specification, but is instead a proposed future development of the package. If adopted, it would be a child of a GeneAssociation that would describe a single 'and' or 'or' relationship between two or more genes or other associations.

The present code is one of the possible Association types for this proposed SBML Level 3 Flux Balance Constraints (“fbc”) package future development.

libsbml.OUTPUT_TRANSITION_EFFECT_ASSIGNMENT_LEVEL = _libsbml.OUTPUT_TRANSITION_EFFECT_ASSIGNMENT_LEVEL

qual One of the possible OutputTransition "transitionEffect" attribute values.

The OutputTransition class is part of the SBML Level 3 Qualitative Models package. Its purpose is to represent a qualitative species that is affected by a Transition. (In Petri net models, these are the output places of the transition.) OutputTransition has an attribute named "transitionEffect" that is used to describe how the QualitativeSpecies referenced by the Output is affected by the Transition.

The present code is one of the possible values of the "transitionEffect" attribute of an OutputTransition object.

libsbml.OUTPUT_TRANSITION_EFFECT_PRODUCTION = _libsbml.OUTPUT_TRANSITION_EFFECT_PRODUCTION

long

qual One of the possible OutputTransition "transitionEffect" attribute values.

The OutputTransition class is part of the SBML Level 3 Qualitative Models package. Its purpose is to represent a qualitative species that is affected by a Transition. (In Petri net models, these are the output places of the transition.) OutputTransition has an attribute named "transitionEffect" that is used to describe how the QualitativeSpecies referenced by the Output is affected by the Transition.

The present code is one of the possible values of the "transitionEffect" attribute of an OutputTransition object.

libsbml.OUTPUT_TRANSITION_EFFECT_UNKNOWN = _libsbml.OUTPUT_TRANSITION_EFFECT_UNKNOWN

qual One of the possible OutputTransition "transitionEffect" attribute values.

The OutputTransition class is part of the SBML Level 3 Qualitative Models package. Its purpose is to represent a qualitative species that is affected by a Transition. (In Petri net models, these are the output places of the transition.) OutputTransition has an attribute named "transitionEffect" that is used to describe how the QualitativeSpecies referenced by the Output is affected by the Transition.

The present code is one of the possible values of the "transitionEffect" attribute of an OutputTransition object.

libsbml.OverdeterminedSystem = _libsbml.OverdeterminedSystem

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.PackageConversionNotSupported = _libsbml.PackageConversionNotSupported

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.PackageNSMustMatch = _libsbml.PackageNSMustMatch

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.PackageRequiredShouldBeFalse = _libsbml.PackageRequiredShouldBeFalse

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.ParameterShouldHaveUnits = _libsbml.ParameterShouldHaveUnits

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.ParameterShouldHaveValue = _libsbml.ParameterShouldHaveValue

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.ParameterUnits = _libsbml.ParameterUnits

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.PersistentNotBoolean = _libsbml.PersistentNotBoolean

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.PieceNeedsBoolean = _libsbml.PieceNeedsBoolean

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.PiecewiseNeedsConsistentTypes = _libsbml.PiecewiseNeedsConsistentTypes

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.PriorityLostFromL3 = _libsbml.PriorityLostFromL3

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.PriorityUnitsNotDimensionless = _libsbml.PriorityUnitsNotDimensionless

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.QualAttributeRequiredMissing = _libsbml.QualAttributeRequiredMissing

qual A value in the enumeration of all the error and warning codes generated by the libSBML “qual” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.QualAttributeRequiredMustBeBoolean = _libsbml.QualAttributeRequiredMustBeBoolean

qual A value in the enumeration of all the error and warning codes generated by the libSBML “qual” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.QualCompartmentMustReferExisting = _libsbml.QualCompartmentMustReferExisting

qual A value in the enumeration of all the error and warning codes generated by the libSBML “qual” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.QualConstantMustBeBool = _libsbml.QualConstantMustBeBool

qual A value in the enumeration of all the error and warning codes generated by the libSBML “qual” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.QualConstantQSCannotBeOutput = _libsbml.QualConstantQSCannotBeOutput

qual A value in the enumeration of all the error and warning codes generated by the libSBML “qual” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.QualDefaultTermAllowedAttributes = _libsbml.QualDefaultTermAllowedAttributes

qual A value in the enumeration of all the error and warning codes generated by the libSBML “qual” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.QualDefaultTermAllowedCoreAttributes = _libsbml.QualDefaultTermAllowedCoreAttributes

qual A value in the enumeration of all the error and warning codes generated by the libSBML “qual” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.QualDefaultTermAllowedElements = _libsbml.QualDefaultTermAllowedElements

qual A value in the enumeration of all the error and warning codes generated by the libSBML “qual” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.QualDefaultTermResultMustBeInteger = _libsbml.QualDefaultTermResultMustBeInteger

qual A value in the enumeration of all the error and warning codes generated by the libSBML “qual” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.QualDefaultTermResultMustBeNonNeg = _libsbml.QualDefaultTermResultMustBeNonNeg

qual A value in the enumeration of all the error and warning codes generated by the libSBML “qual” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.QualDuplicateComponentId = _libsbml.QualDuplicateComponentId

qual A value in the enumeration of all the error and warning codes generated by the libSBML “qual” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.QualElementNotInNs = _libsbml.QualElementNotInNs

qual A value in the enumeration of all the error and warning codes generated by the libSBML “qual” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.QualEmptyLONotAllowed = _libsbml.QualEmptyLONotAllowed

qual A value in the enumeration of all the error and warning codes generated by the libSBML “qual” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.QualFuncTermAllowedAttributes = _libsbml.QualFuncTermAllowedAttributes

qual A value in the enumeration of all the error and warning codes generated by the libSBML “qual” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.QualFuncTermAllowedCoreAttributes = _libsbml.QualFuncTermAllowedCoreAttributes

qual A value in the enumeration of all the error and warning codes generated by the libSBML “qual” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.QualFuncTermAllowedElements = _libsbml.QualFuncTermAllowedElements

qual A value in the enumeration of all the error and warning codes generated by the libSBML “qual” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.QualFuncTermOnlyOneMath = _libsbml.QualFuncTermOnlyOneMath

qual A value in the enumeration of all the error and warning codes generated by the libSBML “qual” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.QualFuncTermResultMustBeInteger = _libsbml.QualFuncTermResultMustBeInteger

qual A value in the enumeration of all the error and warning codes generated by the libSBML “qual” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.QualFuncTermResultMustBeNonNeg = _libsbml.QualFuncTermResultMustBeNonNeg

qual A value in the enumeration of all the error and warning codes generated by the libSBML “qual” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.QualFunctionTermBool = _libsbml.QualFunctionTermBool

qual A value in the enumeration of all the error and warning codes generated by the libSBML “qual” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.QualInitalLevelNotNegative = _libsbml.QualInitalLevelNotNegative

qual A value in the enumeration of all the error and warning codes generated by the libSBML “qual” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.QualInitialLevelCannotExceedMax = _libsbml.QualInitialLevelCannotExceedMax

qual A value in the enumeration of all the error and warning codes generated by the libSBML “qual” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.QualInitialLevelMustBeInt = _libsbml.QualInitialLevelMustBeInt

qual A value in the enumeration of all the error and warning codes generated by the libSBML “qual” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.QualInputAllowedAttributes = _libsbml.QualInputAllowedAttributes

qual A value in the enumeration of all the error and warning codes generated by the libSBML “qual” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.QualInputAllowedCoreAttributes = _libsbml.QualInputAllowedCoreAttributes

qual A value in the enumeration of all the error and warning codes generated by the libSBML “qual” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.QualInputAllowedElements = _libsbml.QualInputAllowedElements

qual A value in the enumeration of all the error and warning codes generated by the libSBML “qual” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.QualInputConstantCannotBeConsumed = _libsbml.QualInputConstantCannotBeConsumed

qual A value in the enumeration of all the error and warning codes generated by the libSBML “qual” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.QualInputNameMustBeString = _libsbml.QualInputNameMustBeString

qual A value in the enumeration of all the error and warning codes generated by the libSBML “qual” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.QualInputQSMustBeExistingQS = _libsbml.QualInputQSMustBeExistingQS

qual A value in the enumeration of all the error and warning codes generated by the libSBML “qual” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.QualInputSignMustBeSignEnum = _libsbml.QualInputSignMustBeSignEnum

qual A value in the enumeration of all the error and warning codes generated by the libSBML “qual” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.QualInputThreshMustBeInteger = _libsbml.QualInputThreshMustBeInteger

qual A value in the enumeration of all the error and warning codes generated by the libSBML “qual” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.QualInputThreshMustBeNonNegative = _libsbml.QualInputThreshMustBeNonNegative

qual A value in the enumeration of all the error and warning codes generated by the libSBML “qual” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.QualInputTransEffectMustBeInputEffect = _libsbml.QualInputTransEffectMustBeInputEffect

qual A value in the enumeration of all the error and warning codes generated by the libSBML “qual” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.QualLOQualSpeciesAllowedAttributes = _libsbml.QualLOQualSpeciesAllowedAttributes

qual A value in the enumeration of all the error and warning codes generated by the libSBML “qual” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.QualLOQualSpeciesAllowedElements = _libsbml.QualLOQualSpeciesAllowedElements

qual A value in the enumeration of all the error and warning codes generated by the libSBML “qual” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.QualLOTransitiondAllowedElements = _libsbml.QualLOTransitiondAllowedElements

qual A value in the enumeration of all the error and warning codes generated by the libSBML “qual” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.QualLOTransitionsAllowedAttributes = _libsbml.QualLOTransitionsAllowedAttributes

qual A value in the enumeration of all the error and warning codes generated by the libSBML “qual” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.QualMathCSymbolDisallowed = _libsbml.QualMathCSymbolDisallowed

qual A value in the enumeration of all the error and warning codes generated by the libSBML “qual” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.QualMaxLevelMustBeInt = _libsbml.QualMaxLevelMustBeInt

qual A value in the enumeration of all the error and warning codes generated by the libSBML “qual” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.QualMaxLevelNotNegative = _libsbml.QualMaxLevelNotNegative

qual A value in the enumeration of all the error and warning codes generated by the libSBML “qual” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.QualNameMustBeString = _libsbml.QualNameMustBeString

qual A value in the enumeration of all the error and warning codes generated by the libSBML “qual” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.QualNSUndeclared = _libsbml.QualNSUndeclared

qual A value in the enumeration of all the error and warning codes generated by the libSBML “qual” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.QualOneListOfTransOrQS = _libsbml.QualOneListOfTransOrQS

qual A value in the enumeration of all the error and warning codes generated by the libSBML “qual” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.QualOutputAllowedAttributes = _libsbml.QualOutputAllowedAttributes

qual A value in the enumeration of all the error and warning codes generated by the libSBML “qual” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.QualOutputAllowedCoreAttributes = _libsbml.QualOutputAllowedCoreAttributes

qual A value in the enumeration of all the error and warning codes generated by the libSBML “qual” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.QualOutputAllowedElements = _libsbml.QualOutputAllowedElements

qual A value in the enumeration of all the error and warning codes generated by the libSBML “qual” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.QualOutputConstantMustBeFalse = _libsbml.QualOutputConstantMustBeFalse

qual A value in the enumeration of all the error and warning codes generated by the libSBML “qual” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.QualOutputLevelMustBeInteger = _libsbml.QualOutputLevelMustBeInteger

qual A value in the enumeration of all the error and warning codes generated by the libSBML “qual” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.QualOutputLevelMustBeNonNegative = _libsbml.QualOutputLevelMustBeNonNegative

qual A value in the enumeration of all the error and warning codes generated by the libSBML “qual” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.QualOutputNameMustBeString = _libsbml.QualOutputNameMustBeString

qual A value in the enumeration of all the error and warning codes generated by the libSBML “qual” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.QualOutputProductionMustHaveLevel = _libsbml.QualOutputProductionMustHaveLevel

qual A value in the enumeration of all the error and warning codes generated by the libSBML “qual” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.QualOutputQSMustBeExistingQS = _libsbml.QualOutputQSMustBeExistingQS

qual A value in the enumeration of all the error and warning codes generated by the libSBML “qual” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.QualOutputTransEffectMustBeOutput = _libsbml.QualOutputTransEffectMustBeOutput

qual A value in the enumeration of all the error and warning codes generated by the libSBML “qual” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.QualQSAssignedOnlyOnce = _libsbml.QualQSAssignedOnlyOnce

qual A value in the enumeration of all the error and warning codes generated by the libSBML “qual” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.QualQualSpeciesAllowedAttributes = _libsbml.QualQualSpeciesAllowedAttributes

qual A value in the enumeration of all the error and warning codes generated by the libSBML “qual” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.QualQualSpeciesAllowedCoreAttributes = _libsbml.QualQualSpeciesAllowedCoreAttributes

qual A value in the enumeration of all the error and warning codes generated by the libSBML “qual” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.QualQualSpeciesAllowedElements = _libsbml.QualQualSpeciesAllowedElements

qual A value in the enumeration of all the error and warning codes generated by the libSBML “qual” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.QualRequiredTrueIfTransitions = _libsbml.QualRequiredTrueIfTransitions

qual A value in the enumeration of all the error and warning codes generated by the libSBML “qual” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.QualTransitionAllowedAttributes = _libsbml.QualTransitionAllowedAttributes

qual A value in the enumeration of all the error and warning codes generated by the libSBML “qual” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.QualTransitionAllowedCoreAttributes = _libsbml.QualTransitionAllowedCoreAttributes

qual A value in the enumeration of all the error and warning codes generated by the libSBML “qual” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.QualTransitionAllowedElements = _libsbml.QualTransitionAllowedElements

qual A value in the enumeration of all the error and warning codes generated by the libSBML “qual” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.QualTransitionEmptyLOElements = _libsbml.QualTransitionEmptyLOElements

qual A value in the enumeration of all the error and warning codes generated by the libSBML “qual” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.QualTransitionLOElements = _libsbml.QualTransitionLOElements

qual A value in the enumeration of all the error and warning codes generated by the libSBML “qual” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.QualTransitionLOFuncTermAttributes = _libsbml.QualTransitionLOFuncTermAttributes

qual A value in the enumeration of all the error and warning codes generated by the libSBML “qual” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.QualTransitionLOFuncTermElements = _libsbml.QualTransitionLOFuncTermElements

qual A value in the enumeration of all the error and warning codes generated by the libSBML “qual” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.QualTransitionLOFuncTermExceedMax = _libsbml.QualTransitionLOFuncTermExceedMax

qual A value in the enumeration of all the error and warning codes generated by the libSBML “qual” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.QualTransitionLOFuncTermNegative = _libsbml.QualTransitionLOFuncTermNegative

qual A value in the enumeration of all the error and warning codes generated by the libSBML “qual” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.QualTransitionLOInputAttributes = _libsbml.QualTransitionLOInputAttributes

qual A value in the enumeration of all the error and warning codes generated by the libSBML “qual” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.QualTransitionLOInputElements = _libsbml.QualTransitionLOInputElements

qual A value in the enumeration of all the error and warning codes generated by the libSBML “qual” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.QualTransitionLOOutputAttributes = _libsbml.QualTransitionLOOutputAttributes

qual A value in the enumeration of all the error and warning codes generated by the libSBML “qual” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.QualTransitionLOOutputElements = _libsbml.QualTransitionLOOutputElements

qual A value in the enumeration of all the error and warning codes generated by the libSBML “qual” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.QualTransitionNameMustBeString = _libsbml.QualTransitionNameMustBeString

qual A value in the enumeration of all the error and warning codes generated by the libSBML “qual” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.QualUnknown = _libsbml.QualUnknown

long

qual A value in the enumeration of all the error and warning codes generated by the libSBML “qual” extension for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.RateOfSpeciesTargetCompartmentNot = _libsbml.RateOfSpeciesTargetCompartmentNot

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.RateOfTargetCannotBeAssigned = _libsbml.RateOfTargetCannotBeAssigned

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.RateOfTargetMustBeCi = _libsbml.RateOfTargetMustBeCi

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.RateRuleCompartmentMismatch = _libsbml.RateRuleCompartmentMismatch

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.RateRuleForConstantEntity = _libsbml.RateRuleForConstantEntity

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.RateRuleParameterMismatch = _libsbml.RateRuleParameterMismatch

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.RateRuleSpeciesMismatch = _libsbml.RateRuleSpeciesMismatch

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.RateRuleStoichiometryMismatch = _libsbml.RateRuleStoichiometryMismatch

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.RDFAboutTagNotMetaid = _libsbml.RDFAboutTagNotMetaid

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.RDFEmptyAboutTag = _libsbml.RDFEmptyAboutTag

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.RDFMissingAboutTag = _libsbml.RDFMissingAboutTag

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.RDFNotCompleteModelHistory = _libsbml.RDFNotCompleteModelHistory

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.RDFNotModelHistory = _libsbml.RDFNotModelHistory

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.RecursiveCompartmentContainment = _libsbml.RecursiveCompartmentContainment

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.RecursiveFunctionDefinition = _libsbml.RecursiveFunctionDefinition

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.RepeatedRule10304 = _libsbml.RepeatedRule10304

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.RepeatedRule20611 = _libsbml.RepeatedRule20611

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.RequiredPackagePresent = _libsbml.RequiredPackagePresent

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.RULE_TYPE_INVALID = _libsbml.RULE_TYPE_INVALID

One of the possible SBML Rule object types.

libsbml.RULE_TYPE_RATE = _libsbml.RULE_TYPE_RATE

One of the possible SBML Rule object types.

libsbml.RULE_TYPE_SCALAR = _libsbml.RULE_TYPE_SCALAR

One of the possible SBML Rule object types.

libsbml.RuleCannotRef0DComp = _libsbml.RuleCannotRef0DComp

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.SBML_ALGEBRAIC_RULE = _libsbml.SBML_ALGEBRAIC_RULE

One of the possible SBML component type codes.

LibSBML attaches an identifying code to every kind of SBML object. These are known as SBML type codes. In other languages, the set of type codes is stored in an enumeration; in the Java language interface for libSBML, the type codes are defined as static integer constants in the interface class libsbml. The names of the type codes all begin with the characters SBML_.

libsbml.SBML_ASSIGNMENT_RULE = _libsbml.SBML_ASSIGNMENT_RULE

One of the possible SBML component type codes.

LibSBML attaches an identifying code to every kind of SBML object. These are known as SBML type codes. In other languages, the set of type codes is stored in an enumeration; in the Java language interface for libSBML, the type codes are defined as static integer constants in the interface class libsbml. The names of the type codes all begin with the characters SBML_.

libsbml.SBML_COMP_DELETION = _libsbml.SBML_COMP_DELETION

comp One of the possible SBML component type codes.

LibSBML attaches an identifying code to every kind of SBML object. These are known as SBML type codes. In other languages, the set of type codes is stored in an enumeration; in the Java language interface for libSBML, the type codes are defined as static integer constants in the interface class libsbml. The names of the type codes all begin with the characters SBML_.

Each libSBML extension for SBML Level 3 packages adds its own type codes to objects. The present type code belongs to libSBML's extension to support the SBML Level 3 Hierarchical Model Composition (“comp”) package. It is used to identify the type of SBML component to which a given object corresponds.

libsbml.SBML_COMP_EXTERNALMODELDEFINITION = _libsbml.SBML_COMP_EXTERNALMODELDEFINITION

comp One of the possible SBML component type codes.

LibSBML attaches an identifying code to every kind of SBML object. These are known as SBML type codes. In other languages, the set of type codes is stored in an enumeration; in the Java language interface for libSBML, the type codes are defined as static integer constants in the interface class libsbml. The names of the type codes all begin with the characters SBML_.

Each libSBML extension for SBML Level 3 packages adds its own type codes to objects. The present type code belongs to libSBML's extension to support the SBML Level 3 Hierarchical Model Composition (“comp”) package. It is used to identify the type of SBML component to which a given object corresponds.

libsbml.SBML_COMP_MODELDEFINITION = _libsbml.SBML_COMP_MODELDEFINITION

comp One of the possible SBML component type codes.

LibSBML attaches an identifying code to every kind of SBML object. These are known as SBML type codes. In other languages, the set of type codes is stored in an enumeration; in the Java language interface for libSBML, the type codes are defined as static integer constants in the interface class libsbml. The names of the type codes all begin with the characters SBML_.

Each libSBML extension for SBML Level 3 packages adds its own type codes to objects. The present type code belongs to libSBML's extension to support the SBML Level 3 Hierarchical Model Composition (“comp”) package. It is used to identify the type of SBML component to which a given object corresponds.

libsbml.SBML_COMP_PORT = _libsbml.SBML_COMP_PORT

comp One of the possible SBML component type codes.

LibSBML attaches an identifying code to every kind of SBML object. These are known as SBML type codes. In other languages, the set of type codes is stored in an enumeration; in the Java language interface for libSBML, the type codes are defined as static integer constants in the interface class libsbml. The names of the type codes all begin with the characters SBML_.

Each libSBML extension for SBML Level 3 packages adds its own type codes to objects. The present type code belongs to libSBML's extension to support the SBML Level 3 Hierarchical Model Composition (“comp”) package. It is used to identify the type of SBML component to which a given object corresponds.

libsbml.SBML_COMP_REPLACEDBY = _libsbml.SBML_COMP_REPLACEDBY

comp One of the possible SBML component type codes.

LibSBML attaches an identifying code to every kind of SBML object. These are known as SBML type codes. In other languages, the set of type codes is stored in an enumeration; in the Java language interface for libSBML, the type codes are defined as static integer constants in the interface class libsbml. The names of the type codes all begin with the characters SBML_.

Each libSBML extension for SBML Level 3 packages adds its own type codes to objects. The present type code belongs to libSBML's extension to support the SBML Level 3 Hierarchical Model Composition (“comp”) package. It is used to identify the type of SBML component to which a given object corresponds.

libsbml.SBML_COMP_REPLACEDELEMENT = _libsbml.SBML_COMP_REPLACEDELEMENT
libsbml.SBML_COMP_SBASEREF = _libsbml.SBML_COMP_SBASEREF

comp One of the possible SBML component type codes.

LibSBML attaches an identifying code to every kind of SBML object. These are known as SBML type codes. In other languages, the set of type codes is stored in an enumeration; in the Java language interface for libSBML, the type codes are defined as static integer constants in the interface class libsbml. The names of the type codes all begin with the characters SBML_.

Each libSBML extension for SBML Level 3 packages adds its own type codes to objects. The present type code belongs to libSBML's extension to support the SBML Level 3 Hierarchical Model Composition (“comp”) package. It is used to identify the type of SBML component to which a given object corresponds.

libsbml.SBML_COMP_SUBMODEL = _libsbml.SBML_COMP_SUBMODEL

long

comp One of the possible SBML component type codes.

LibSBML attaches an identifying code to every kind of SBML object. These are known as SBML type codes. In other languages, the set of type codes is stored in an enumeration; in the Java language interface for libSBML, the type codes are defined as static integer constants in the interface class libsbml. The names of the type codes all begin with the characters SBML_.

Each libSBML extension for SBML Level 3 packages adds its own type codes to objects. The present type code belongs to libSBML's extension to support the SBML Level 3 Hierarchical Model Composition (“comp”) package. It is used to identify the type of SBML component to which a given object corresponds.

libsbml.SBML_COMPARTMENT = _libsbml.SBML_COMPARTMENT

One of the possible SBML component type codes.

LibSBML attaches an identifying code to every kind of SBML object. These are known as SBML type codes. In other languages, the set of type codes is stored in an enumeration; in the Java language interface for libSBML, the type codes are defined as static integer constants in the interface class libsbml. The names of the type codes all begin with the characters SBML_.

libsbml.SBML_COMPARTMENT_TYPE = _libsbml.SBML_COMPARTMENT_TYPE

One of the possible SBML component type codes.

LibSBML attaches an identifying code to every kind of SBML object. These are known as SBML type codes. In other languages, the set of type codes is stored in an enumeration; in the Java language interface for libSBML, the type codes are defined as static integer constants in the interface class libsbml. The names of the type codes all begin with the characters SBML_.

libsbml.SBML_COMPARTMENT_VOLUME_RULE = _libsbml.SBML_COMPARTMENT_VOLUME_RULE

One of the possible SBML component type codes.

LibSBML attaches an identifying code to every kind of SBML object. These are known as SBML type codes. In other languages, the set of type codes is stored in an enumeration; in the Java language interface for libSBML, the type codes are defined as static integer constants in the interface class libsbml. The names of the type codes all begin with the characters SBML_.

libsbml.SBML_CONSTRAINT = _libsbml.SBML_CONSTRAINT

One of the possible SBML component type codes.

LibSBML attaches an identifying code to every kind of SBML object. These are known as SBML type codes. In other languages, the set of type codes is stored in an enumeration; in the Java language interface for libSBML, the type codes are defined as static integer constants in the interface class libsbml. The names of the type codes all begin with the characters SBML_.

libsbml.SBML_DELAY = _libsbml.SBML_DELAY

One of the possible SBML component type codes.

LibSBML attaches an identifying code to every kind of SBML object. These are known as SBML type codes. In other languages, the set of type codes is stored in an enumeration; in the Java language interface for libSBML, the type codes are defined as static integer constants in the interface class libsbml. The names of the type codes all begin with the characters SBML_.

libsbml.SBML_DOCUMENT = _libsbml.SBML_DOCUMENT

One of the possible SBML component type codes.

LibSBML attaches an identifying code to every kind of SBML object. These are known as SBML type codes. In other languages, the set of type codes is stored in an enumeration; in the Java language interface for libSBML, the type codes are defined as static integer constants in the interface class libsbml. The names of the type codes all begin with the characters SBML_.

libsbml.SBML_EVENT = _libsbml.SBML_EVENT

One of the possible SBML component type codes.

LibSBML attaches an identifying code to every kind of SBML object. These are known as SBML type codes. In other languages, the set of type codes is stored in an enumeration; in the Java language interface for libSBML, the type codes are defined as static integer constants in the interface class libsbml. The names of the type codes all begin with the characters SBML_.

libsbml.SBML_EVENT_ASSIGNMENT = _libsbml.SBML_EVENT_ASSIGNMENT

One of the possible SBML component type codes.

LibSBML attaches an identifying code to every kind of SBML object. These are known as SBML type codes. In other languages, the set of type codes is stored in an enumeration; in the Java language interface for libSBML, the type codes are defined as static integer constants in the interface class libsbml. The names of the type codes all begin with the characters SBML_.

libsbml.SBML_FBC_AND = _libsbml.SBML_FBC_AND

fbc One of the possible SBML component type codes.

LibSBML attaches an identifying code to every kind of SBML object. These are known as SBML type codes. In other languages, the set of type codes is stored in an enumeration; in the Java language interface for libSBML, the type codes are defined as static integer constants in the interface class libsbml. The names of the type codes all begin with the characters SBML_.

Each libSBML extension for SBML Level 3 packages adds its own type codes to objects. The present type code belongs to libSBML's extension to support the SBML Level 3 Flux Balance Constraints (“fbc”) package. It is used to identify the type of SBML component to which a given object corresponds.

libsbml.SBML_FBC_ASSOCIATION = _libsbml.SBML_FBC_ASSOCIATION

fbc One of the possible SBML component type codes.

LibSBML attaches an identifying code to every kind of SBML object. These are known as SBML type codes. In other languages, the set of type codes is stored in an enumeration; in the Java language interface for libSBML, the type codes are defined as static integer constants in the interface class libsbml. The names of the type codes all begin with the characters SBML_.

Each libSBML extension for SBML Level 3 packages adds its own type codes to objects. The present type code belongs to libSBML's extension to support the SBML Level 3 Flux Balance Constraints (“fbc”) package. It is used to identify the type of SBML component to which a given object corresponds.

libsbml.SBML_FBC_FLUXBOUND = _libsbml.SBML_FBC_FLUXBOUND

fbc One of the possible SBML component type codes.

LibSBML attaches an identifying code to every kind of SBML object. These are known as SBML type codes. In other languages, the set of type codes is stored in an enumeration; in the Java language interface for libSBML, the type codes are defined as static integer constants in the interface class libsbml. The names of the type codes all begin with the characters SBML_.

Each libSBML extension for SBML Level 3 packages adds its own type codes to objects. The present type code belongs to libSBML's extension to support the SBML Level 3 Flux Balance Constraints (“fbc”) package. It is used to identify the type of SBML component to which a given object corresponds.

libsbml.SBML_FBC_FLUXOBJECTIVE = _libsbml.SBML_FBC_FLUXOBJECTIVE

fbc One of the possible SBML component type codes.

LibSBML attaches an identifying code to every kind of SBML object. These are known as SBML type codes. In other languages, the set of type codes is stored in an enumeration; in the Java language interface for libSBML, the type codes are defined as static integer constants in the interface class libsbml. The names of the type codes all begin with the characters SBML_.

Each libSBML extension for SBML Level 3 packages adds its own type codes to objects. The present type code belongs to libSBML's extension to support the SBML Level 3 Flux Balance Constraints (“fbc”) package. It is used to identify the type of SBML component to which a given object corresponds.

libsbml.SBML_FBC_GENEASSOCIATION = _libsbml.SBML_FBC_GENEASSOCIATION

fbc One of the possible SBML component type codes.

LibSBML attaches an identifying code to every kind of SBML object. These are known as SBML type codes. In other languages, the set of type codes is stored in an enumeration; in the Java language interface for libSBML, the type codes are defined as static integer constants in the interface class libsbml. The names of the type codes all begin with the characters SBML_.

Each libSBML extension for SBML Level 3 packages adds its own type codes to objects. The present type code belongs to libSBML's extension to support the SBML Level 3 Flux Balance Constraints (“fbc”) package. It is used to identify the type of SBML component to which a given object corresponds.

libsbml.SBML_FBC_GENEPRODUCT = _libsbml.SBML_FBC_GENEPRODUCT

fbc One of the possible SBML component type codes.

LibSBML attaches an identifying code to every kind of SBML object. These are known as SBML type codes. In other languages, the set of type codes is stored in an enumeration; in the Java language interface for libSBML, the type codes are defined as static integer constants in the interface class libsbml. The names of the type codes all begin with the characters SBML_.

Each libSBML extension for SBML Level 3 packages adds its own type codes to objects. The present type code belongs to libSBML's extension to support the SBML Level 3 Flux Balance Constraints (“fbc”) package. It is used to identify the type of SBML component to which a given object corresponds.

libsbml.SBML_FBC_GENEPRODUCTASSOCIATION = _libsbml.SBML_FBC_GENEPRODUCTASSOCIATION

fbc One of the possible SBML component type codes.

LibSBML attaches an identifying code to every kind of SBML object. These are known as SBML type codes. In other languages, the set of type codes is stored in an enumeration; in the Java language interface for libSBML, the type codes are defined as static integer constants in the interface class libsbml. The names of the type codes all begin with the characters SBML_.

Each libSBML extension for SBML Level 3 packages adds its own type codes to objects. The present type code belongs to libSBML's extension to support the SBML Level 3 Flux Balance Constraints (“fbc”) package. It is used to identify the type of SBML component to which a given object corresponds.

libsbml.SBML_FBC_GENEPRODUCTREF = _libsbml.SBML_FBC_GENEPRODUCTREF

fbc One of the possible SBML component type codes.

LibSBML attaches an identifying code to every kind of SBML object. These are known as SBML type codes. In other languages, the set of type codes is stored in an enumeration; in the Java language interface for libSBML, the type codes are defined as static integer constants in the interface class libsbml. The names of the type codes all begin with the characters SBML_.

Each libSBML extension for SBML Level 3 packages adds its own type codes to objects. The present type code belongs to libSBML's extension to support the SBML Level 3 Flux Balance Constraints (“fbc”) package. It is used to identify the type of SBML component to which a given object corresponds.

libsbml.SBML_FBC_OBJECTIVE = _libsbml.SBML_FBC_OBJECTIVE

fbc One of the possible SBML component type codes.

LibSBML attaches an identifying code to every kind of SBML object. These are known as SBML type codes. In other languages, the set of type codes is stored in an enumeration; in the Java language interface for libSBML, the type codes are defined as static integer constants in the interface class libsbml. The names of the type codes all begin with the characters SBML_.

Each libSBML extension for SBML Level 3 packages adds its own type codes to objects. The present type code belongs to libSBML's extension to support the SBML Level 3 Flux Balance Constraints (“fbc”) package. It is used to identify the type of SBML component to which a given object corresponds.

libsbml.SBML_FBC_OR = _libsbml.SBML_FBC_OR

fbc One of the possible SBML component type codes.

LibSBML attaches an identifying code to every kind of SBML object. These are known as SBML type codes. In other languages, the set of type codes is stored in an enumeration; in the Java language interface for libSBML, the type codes are defined as static integer constants in the interface class libsbml. The names of the type codes all begin with the characters SBML_.

Each libSBML extension for SBML Level 3 packages adds its own type codes to objects. The present type code belongs to libSBML's extension to support the SBML Level 3 Flux Balance Constraints (“fbc”) package. It is used to identify the type of SBML component to which a given object corresponds.

libsbml.SBML_FBC_V1ASSOCIATION = _libsbml.SBML_FBC_V1ASSOCIATION

long

fbc One of the possible SBML component type codes.

LibSBML attaches an identifying code to every kind of SBML object. These are known as SBML type codes. In other languages, the set of type codes is stored in an enumeration; in the Java language interface for libSBML, the type codes are defined as static integer constants in the interface class libsbml. The names of the type codes all begin with the characters SBML_.

Each libSBML extension for SBML Level 3 packages adds its own type codes to objects. The present type code belongs to libSBML's extension to support the SBML Level 3 Flux Balance Constraints (“fbc”) package. It is used to identify the type of SBML component to which a given object corresponds.

libsbml.SBML_FUNCTION_DEFINITION = _libsbml.SBML_FUNCTION_DEFINITION

One of the possible SBML component type codes.

LibSBML attaches an identifying code to every kind of SBML object. These are known as SBML type codes. In other languages, the set of type codes is stored in an enumeration; in the Java language interface for libSBML, the type codes are defined as static integer constants in the interface class libsbml. The names of the type codes all begin with the characters SBML_.

libsbml.SBML_GROUPS_GROUP = _libsbml.SBML_GROUPS_GROUP

groups One of the possible SBML component type codes.

LibSBML attaches an identifying code to every kind of SBML object. These are known as SBML type codes. In other languages, the set of type codes is stored in an enumeration; in the Java language interface for libSBML, the type codes are defined as static integer constants in the interface class libsbml. The names of the type codes all begin with the characters SBML_.

Each libSBML extension for SBML Level 3 packages adds its own type codes to objects. The present type code belongs to libSBML's extension to support the SBML Level 3 Groups (“groups”) package. It is used to identify the type of SBML component to which a given object corresponds.

libsbml.SBML_GROUPS_MEMBER = _libsbml.SBML_GROUPS_MEMBER

long

groups One of the possible SBML component type codes.

LibSBML attaches an identifying code to every kind of SBML object. These are known as SBML type codes. In other languages, the set of type codes is stored in an enumeration; in the Java language interface for libSBML, the type codes are defined as static integer constants in the interface class libsbml. The names of the type codes all begin with the characters SBML_.

Each libSBML extension for SBML Level 3 packages adds its own type codes to objects. The present type code belongs to libSBML's extension to support the SBML Level 3 Groups (“groups”) package. It is used to identify the type of SBML component to which a given object corresponds.

libsbml.SBML_INITIAL_ASSIGNMENT = _libsbml.SBML_INITIAL_ASSIGNMENT

One of the possible SBML component type codes.

LibSBML attaches an identifying code to every kind of SBML object. These are known as SBML type codes. In other languages, the set of type codes is stored in an enumeration; in the Java language interface for libSBML, the type codes are defined as static integer constants in the interface class libsbml. The names of the type codes all begin with the characters SBML_.

libsbml.SBML_KINETIC_LAW = _libsbml.SBML_KINETIC_LAW

One of the possible SBML component type codes.

LibSBML attaches an identifying code to every kind of SBML object. These are known as SBML type codes. In other languages, the set of type codes is stored in an enumeration; in the Java language interface for libSBML, the type codes are defined as static integer constants in the interface class libsbml. The names of the type codes all begin with the characters SBML_.

libsbml.SBML_LAYOUT_BOUNDINGBOX = _libsbml.SBML_LAYOUT_BOUNDINGBOX

long

layout One of the possible SBML component type codes.

LibSBML attaches an identifying code to every kind of SBML object. These are known as SBML type codes. In other languages, the set of type codes is stored in an enumeration; in the Java language interface for libSBML, the type codes are defined as static integer constants in the interface class libsbml. The names of the type codes all begin with the characters SBML_.

Each libSBML extension for SBML Level 3 packages adds its own type codes to objects. The present type code belongs to libSBML's extension to support the SBML Level 3 Layout (“layout”) package. It is used to identify the type of SBML component to which a given object corresponds.

libsbml.SBML_LAYOUT_COMPARTMENTGLYPH = _libsbml.SBML_LAYOUT_COMPARTMENTGLYPH

layout One of the possible SBML component type codes.

LibSBML attaches an identifying code to every kind of SBML object. These are known as SBML type codes. In other languages, the set of type codes is stored in an enumeration; in the Java language interface for libSBML, the type codes are defined as static integer constants in the interface class libsbml. The names of the type codes all begin with the characters SBML_.

Each libSBML extension for SBML Level 3 packages adds its own type codes to objects. The present type code belongs to libSBML's extension to support the SBML Level 3 Layout (“layout”) package. It is used to identify the type of SBML component to which a given object corresponds.

libsbml.SBML_LAYOUT_CUBICBEZIER = _libsbml.SBML_LAYOUT_CUBICBEZIER

layout One of the possible SBML component type codes.

LibSBML attaches an identifying code to every kind of SBML object. These are known as SBML type codes. In other languages, the set of type codes is stored in an enumeration; in the Java language interface for libSBML, the type codes are defined as static integer constants in the interface class libsbml. The names of the type codes all begin with the characters SBML_.

Each libSBML extension for SBML Level 3 packages adds its own type codes to objects. The present type code belongs to libSBML's extension to support the SBML Level 3 Layout (“layout”) package. It is used to identify the type of SBML component to which a given object corresponds.

libsbml.SBML_LAYOUT_CURVE = _libsbml.SBML_LAYOUT_CURVE

layout One of the possible SBML component type codes.

LibSBML attaches an identifying code to every kind of SBML object. These are known as SBML type codes. In other languages, the set of type codes is stored in an enumeration; in the Java language interface for libSBML, the type codes are defined as static integer constants in the interface class libsbml. The names of the type codes all begin with the characters SBML_.

Each libSBML extension for SBML Level 3 packages adds its own type codes to objects. The present type code belongs to libSBML's extension to support the SBML Level 3 Layout (“layout”) package. It is used to identify the type of SBML component to which a given object corresponds.

libsbml.SBML_LAYOUT_DIMENSIONS = _libsbml.SBML_LAYOUT_DIMENSIONS

layout One of the possible SBML component type codes.

LibSBML attaches an identifying code to every kind of SBML object. These are known as SBML type codes. In other languages, the set of type codes is stored in an enumeration; in the Java language interface for libSBML, the type codes are defined as static integer constants in the interface class libsbml. The names of the type codes all begin with the characters SBML_.

Each libSBML extension for SBML Level 3 packages adds its own type codes to objects. The present type code belongs to libSBML's extension to support the SBML Level 3 Layout (“layout”) package. It is used to identify the type of SBML component to which a given object corresponds.

libsbml.SBML_LAYOUT_GENERALGLYPH = _libsbml.SBML_LAYOUT_GENERALGLYPH

layout One of the possible SBML component type codes.

LibSBML attaches an identifying code to every kind of SBML object. These are known as SBML type codes. In other languages, the set of type codes is stored in an enumeration; in the Java language interface for libSBML, the type codes are defined as static integer constants in the interface class libsbml. The names of the type codes all begin with the characters SBML_.

Each libSBML extension for SBML Level 3 packages adds its own type codes to objects. The present type code belongs to libSBML's extension to support the SBML Level 3 Layout (“layout”) package. It is used to identify the type of SBML component to which a given object corresponds.

libsbml.SBML_LAYOUT_GRAPHICALOBJECT = _libsbml.SBML_LAYOUT_GRAPHICALOBJECT

layout One of the possible SBML component type codes.

LibSBML attaches an identifying code to every kind of SBML object. These are known as SBML type codes. In other languages, the set of type codes is stored in an enumeration; in the Java language interface for libSBML, the type codes are defined as static integer constants in the interface class libsbml. The names of the type codes all begin with the characters SBML_.

Each libSBML extension for SBML Level 3 packages adds its own type codes to objects. The present type code belongs to libSBML's extension to support the SBML Level 3 Layout (“layout”) package. It is used to identify the type of SBML component to which a given object corresponds.

libsbml.SBML_LAYOUT_LAYOUT = _libsbml.SBML_LAYOUT_LAYOUT

layout One of the possible SBML component type codes.

LibSBML attaches an identifying code to every kind of SBML object. These are known as SBML type codes. In other languages, the set of type codes is stored in an enumeration; in the Java language interface for libSBML, the type codes are defined as static integer constants in the interface class libsbml. The names of the type codes all begin with the characters SBML_.

Each libSBML extension for SBML Level 3 packages adds its own type codes to objects. The present type code belongs to libSBML's extension to support the SBML Level 3 Layout (“layout”) package. It is used to identify the type of SBML component to which a given object corresponds.

libsbml.SBML_LAYOUT_LINESEGMENT = _libsbml.SBML_LAYOUT_LINESEGMENT

layout One of the possible SBML component type codes.

LibSBML attaches an identifying code to every kind of SBML object. These are known as SBML type codes. In other languages, the set of type codes is stored in an enumeration; in the Java language interface for libSBML, the type codes are defined as static integer constants in the interface class libsbml. The names of the type codes all begin with the characters SBML_.

Each libSBML extension for SBML Level 3 packages adds its own type codes to objects. The present type code belongs to libSBML's extension to support the SBML Level 3 Layout (“layout”) package. It is used to identify the type of SBML component to which a given object corresponds.

libsbml.SBML_LAYOUT_POINT = _libsbml.SBML_LAYOUT_POINT

layout One of the possible SBML component type codes.

LibSBML attaches an identifying code to every kind of SBML object. These are known as SBML type codes. In other languages, the set of type codes is stored in an enumeration; in the Java language interface for libSBML, the type codes are defined as static integer constants in the interface class libsbml. The names of the type codes all begin with the characters SBML_.

Each libSBML extension for SBML Level 3 packages adds its own type codes to objects. The present type code belongs to libSBML's extension to support the SBML Level 3 Layout (“layout”) package. It is used to identify the type of SBML component to which a given object corresponds.

libsbml.SBML_LAYOUT_REACTIONGLYPH = _libsbml.SBML_LAYOUT_REACTIONGLYPH

layout One of the possible SBML component type codes.

LibSBML attaches an identifying code to every kind of SBML object. These are known as SBML type codes. In other languages, the set of type codes is stored in an enumeration; in the Java language interface for libSBML, the type codes are defined as static integer constants in the interface class libsbml. The names of the type codes all begin with the characters SBML_.

Each libSBML extension for SBML Level 3 packages adds its own type codes to objects. The present type code belongs to libSBML's extension to support the SBML Level 3 Layout (“layout”) package. It is used to identify the type of SBML component to which a given object corresponds.

libsbml.SBML_LAYOUT_REFERENCEGLYPH = _libsbml.SBML_LAYOUT_REFERENCEGLYPH

layout One of the possible SBML component type codes.

LibSBML attaches an identifying code to every kind of SBML object. These are known as SBML type codes. In other languages, the set of type codes is stored in an enumeration; in the Java language interface for libSBML, the type codes are defined as static integer constants in the interface class libsbml. The names of the type codes all begin with the characters SBML_.

Each libSBML extension for SBML Level 3 packages adds its own type codes to objects. The present type code belongs to libSBML's extension to support the SBML Level 3 Layout (“layout”) package. It is used to identify the type of SBML component to which a given object corresponds.

libsbml.SBML_LAYOUT_SPECIESGLYPH = _libsbml.SBML_LAYOUT_SPECIESGLYPH

layout One of the possible SBML component type codes.

LibSBML attaches an identifying code to every kind of SBML object. These are known as SBML type codes. In other languages, the set of type codes is stored in an enumeration; in the Java language interface for libSBML, the type codes are defined as static integer constants in the interface class libsbml. The names of the type codes all begin with the characters SBML_.

Each libSBML extension for SBML Level 3 packages adds its own type codes to objects. The present type code belongs to libSBML's extension to support the SBML Level 3 Layout (“layout”) package. It is used to identify the type of SBML component to which a given object corresponds.

libsbml.SBML_LAYOUT_SPECIESREFERENCEGLYPH = _libsbml.SBML_LAYOUT_SPECIESREFERENCEGLYPH

layout One of the possible SBML component type codes.

LibSBML attaches an identifying code to every kind of SBML object. These are known as SBML type codes. In other languages, the set of type codes is stored in an enumeration; in the Java language interface for libSBML, the type codes are defined as static integer constants in the interface class libsbml. The names of the type codes all begin with the characters SBML_.

Each libSBML extension for SBML Level 3 packages adds its own type codes to objects. The present type code belongs to libSBML's extension to support the SBML Level 3 Layout (“layout”) package. It is used to identify the type of SBML component to which a given object corresponds.

libsbml.SBML_LAYOUT_TEXTGLYPH = _libsbml.SBML_LAYOUT_TEXTGLYPH

layout One of the possible SBML component type codes.

LibSBML attaches an identifying code to every kind of SBML object. These are known as SBML type codes. In other languages, the set of type codes is stored in an enumeration; in the Java language interface for libSBML, the type codes are defined as static integer constants in the interface class libsbml. The names of the type codes all begin with the characters SBML_.

Each libSBML extension for SBML Level 3 packages adds its own type codes to objects. The present type code belongs to libSBML's extension to support the SBML Level 3 Layout (“layout”) package. It is used to identify the type of SBML component to which a given object corresponds.

libsbml.SBML_LIST_OF = _libsbml.SBML_LIST_OF

One of the possible SBML component type codes.

LibSBML attaches an identifying code to every kind of SBML object. These are known as SBML type codes. In other languages, the set of type codes is stored in an enumeration; in the Java language interface for libSBML, the type codes are defined as static integer constants in the interface class libsbml. The names of the type codes all begin with the characters SBML_.

libsbml.SBML_LOCAL_PARAMETER = _libsbml.SBML_LOCAL_PARAMETER

One of the possible SBML component type codes.

LibSBML attaches an identifying code to every kind of SBML object. These are known as SBML type codes. In other languages, the set of type codes is stored in an enumeration; in the Java language interface for libSBML, the type codes are defined as static integer constants in the interface class libsbml. The names of the type codes all begin with the characters SBML_.

libsbml.SBML_MODEL = _libsbml.SBML_MODEL

One of the possible SBML component type codes.

LibSBML attaches an identifying code to every kind of SBML object. These are known as SBML type codes. In other languages, the set of type codes is stored in an enumeration; in the Java language interface for libSBML, the type codes are defined as static integer constants in the interface class libsbml. The names of the type codes all begin with the characters SBML_.

libsbml.SBML_MODIFIER_SPECIES_REFERENCE = _libsbml.SBML_MODIFIER_SPECIES_REFERENCE

One of the possible SBML component type codes.

LibSBML attaches an identifying code to every kind of SBML object. These are known as SBML type codes. In other languages, the set of type codes is stored in an enumeration; in the Java language interface for libSBML, the type codes are defined as static integer constants in the interface class libsbml. The names of the type codes all begin with the characters SBML_.

libsbml.SBML_MULTI_BINDING_SITE_SPECIES_TYPE = _libsbml.SBML_MULTI_BINDING_SITE_SPECIES_TYPE

multi A value in an enumeration defined by the libSBML “multi” extension to implement functionality for the SBML Level 3 Multistate, Multicomponent and Multicompartment Species package.

libsbml.SBML_MULTI_COMPARTMENT_REFERENCE = _libsbml.SBML_MULTI_COMPARTMENT_REFERENCE

multi A value in an enumeration defined by the libSBML “multi” extension to implement functionality for the SBML Level 3 Multistate, Multicomponent and Multicompartment Species package.

libsbml.SBML_MULTI_IN_SPECIES_TYPE_BOND = _libsbml.SBML_MULTI_IN_SPECIES_TYPE_BOND

multi A value in an enumeration defined by the libSBML “multi” extension to implement functionality for the SBML Level 3 Multistate, Multicomponent and Multicompartment Species package.

libsbml.SBML_MULTI_INTRA_SPECIES_REACTION = _libsbml.SBML_MULTI_INTRA_SPECIES_REACTION

multi A value in an enumeration defined by the libSBML “multi” extension to implement functionality for the SBML Level 3 Multistate, Multicomponent and Multicompartment Species package.

libsbml.SBML_MULTI_OUTWARD_BINDING_SITE = _libsbml.SBML_MULTI_OUTWARD_BINDING_SITE

multi A value in an enumeration defined by the libSBML “multi” extension to implement functionality for the SBML Level 3 Multistate, Multicomponent and Multicompartment Species package.

libsbml.SBML_MULTI_POSSIBLE_SPECIES_FEATURE_VALUE = _libsbml.SBML_MULTI_POSSIBLE_SPECIES_FEATURE_VALUE

multi A value in an enumeration defined by the libSBML “multi” extension to implement functionality for the SBML Level 3 Multistate, Multicomponent and Multicompartment Species package.

libsbml.SBML_MULTI_SPECIES_FEATURE = _libsbml.SBML_MULTI_SPECIES_FEATURE

multi A value in an enumeration defined by the libSBML “multi” extension to implement functionality for the SBML Level 3 Multistate, Multicomponent and Multicompartment Species package.

libsbml.SBML_MULTI_SPECIES_FEATURE_TYPE = _libsbml.SBML_MULTI_SPECIES_FEATURE_TYPE

multi A value in an enumeration defined by the libSBML “multi” extension to implement functionality for the SBML Level 3 Multistate, Multicomponent and Multicompartment Species package.

libsbml.SBML_MULTI_SPECIES_FEATURE_VALUE = _libsbml.SBML_MULTI_SPECIES_FEATURE_VALUE

multi A value in an enumeration defined by the libSBML “multi” extension to implement functionality for the SBML Level 3 Multistate, Multicomponent and Multicompartment Species package.

libsbml.SBML_MULTI_SPECIES_TYPE = _libsbml.SBML_MULTI_SPECIES_TYPE

multi A value in an enumeration defined by the libSBML “multi” extension to implement functionality for the SBML Level 3 Multistate, Multicomponent and Multicompartment Species package.

libsbml.SBML_MULTI_SPECIES_TYPE_COMPONENT_INDEX = _libsbml.SBML_MULTI_SPECIES_TYPE_COMPONENT_INDEX

multi A value in an enumeration defined by the libSBML “multi” extension to implement functionality for the SBML Level 3 Multistate, Multicomponent and Multicompartment Species package.

libsbml.SBML_MULTI_SPECIES_TYPE_COMPONENT_MAP_IN_PRODUCT = _libsbml.SBML_MULTI_SPECIES_TYPE_COMPONENT_MAP_IN_PRODUCT

multi A value in an enumeration defined by the libSBML “multi” extension to implement functionality for the SBML Level 3 Multistate, Multicomponent and Multicompartment Species package.

libsbml.SBML_MULTI_SPECIES_TYPE_INSTANCE = _libsbml.SBML_MULTI_SPECIES_TYPE_INSTANCE

multi A value in an enumeration defined by the libSBML “multi” extension to implement functionality for the SBML Level 3 Multistate, Multicomponent and Multicompartment Species package.

libsbml.SBML_MULTI_SUBLIST_OF_SPECIES_FEATURES = _libsbml.SBML_MULTI_SUBLIST_OF_SPECIES_FEATURES

multi A value in an enumeration defined by the libSBML “multi” extension to implement functionality for the SBML Level 3 Multistate, Multicomponent and Multicompartment Species package.

libsbml.SBML_PARAMETER = _libsbml.SBML_PARAMETER

One of the possible SBML component type codes.

LibSBML attaches an identifying code to every kind of SBML object. These are known as SBML type codes. In other languages, the set of type codes is stored in an enumeration; in the Java language interface for libSBML, the type codes are defined as static integer constants in the interface class libsbml. The names of the type codes all begin with the characters SBML_.

libsbml.SBML_PARAMETER_RULE = _libsbml.SBML_PARAMETER_RULE

One of the possible SBML component type codes.

LibSBML attaches an identifying code to every kind of SBML object. These are known as SBML type codes. In other languages, the set of type codes is stored in an enumeration; in the Java language interface for libSBML, the type codes are defined as static integer constants in the interface class libsbml. The names of the type codes all begin with the characters SBML_.

libsbml.SBML_PRIORITY = _libsbml.SBML_PRIORITY

One of the possible SBML component type codes.

LibSBML attaches an identifying code to every kind of SBML object. These are known as SBML type codes. In other languages, the set of type codes is stored in an enumeration; in the Java language interface for libSBML, the type codes are defined as static integer constants in the interface class libsbml. The names of the type codes all begin with the characters SBML_.

libsbml.SBML_QUAL_DEFAULT_TERM = _libsbml.SBML_QUAL_DEFAULT_TERM

qual One of the possible SBML component type codes.

LibSBML attaches an identifying code to every kind of SBML object. These are known as SBML type codes. In other languages, the set of type codes is stored in an enumeration; in the Java language interface for libSBML, the type codes are defined as static integer constants in the interface class libsbml. The names of the type codes all begin with the characters SBML_.

Each libSBML extension for SBML Level 3 packages adds its own type codes to objects. The present type code belongs to libSBML's extension to support the SBML Level 3 Qualitative Models (“qual”) package. It is used to identify the type of SBML component to which a given object corresponds.

libsbml.SBML_QUAL_FUNCTION_TERM = _libsbml.SBML_QUAL_FUNCTION_TERM

qual One of the possible SBML component type codes.

LibSBML attaches an identifying code to every kind of SBML object. These are known as SBML type codes. In other languages, the set of type codes is stored in an enumeration; in the Java language interface for libSBML, the type codes are defined as static integer constants in the interface class libsbml. The names of the type codes all begin with the characters SBML_.

Each libSBML extension for SBML Level 3 packages adds its own type codes to objects. The present type code belongs to libSBML's extension to support the SBML Level 3 Qualitative Models (“qual”) package. It is used to identify the type of SBML component to which a given object corresponds.

libsbml.SBML_QUAL_INPUT = _libsbml.SBML_QUAL_INPUT

qual One of the possible SBML component type codes.

LibSBML attaches an identifying code to every kind of SBML object. These are known as SBML type codes. In other languages, the set of type codes is stored in an enumeration; in the Java language interface for libSBML, the type codes are defined as static integer constants in the interface class libsbml. The names of the type codes all begin with the characters SBML_.

Each libSBML extension for SBML Level 3 packages adds its own type codes to objects. The present type code belongs to libSBML's extension to support the SBML Level 3 Qualitative Models (“qual”) package. It is used to identify the type of SBML component to which a given object corresponds.

libsbml.SBML_QUAL_OUTPUT = _libsbml.SBML_QUAL_OUTPUT

qual One of the possible SBML component type codes.

LibSBML attaches an identifying code to every kind of SBML object. These are known as SBML type codes. In other languages, the set of type codes is stored in an enumeration; in the Java language interface for libSBML, the type codes are defined as static integer constants in the interface class libsbml. The names of the type codes all begin with the characters SBML_.

Each libSBML extension for SBML Level 3 packages adds its own type codes to objects. The present type code belongs to libSBML's extension to support the SBML Level 3 Qualitative Models (“qual”) package. It is used to identify the type of SBML component to which a given object corresponds.

libsbml.SBML_QUAL_QUALITATIVE_SPECIES = _libsbml.SBML_QUAL_QUALITATIVE_SPECIES

long

qual One of the possible SBML component type codes.

LibSBML attaches an identifying code to every kind of SBML object. These are known as SBML type codes. In other languages, the set of type codes is stored in an enumeration; in the Java language interface for libSBML, the type codes are defined as static integer constants in the interface class libsbml. The names of the type codes all begin with the characters SBML_.

Each libSBML extension for SBML Level 3 packages adds its own type codes to objects. The present type code belongs to libSBML's extension to support the SBML Level 3 Qualitative Models (“qual”) package. It is used to identify the type of SBML component to which a given object corresponds.

libsbml.SBML_QUAL_TRANSITION = _libsbml.SBML_QUAL_TRANSITION

qual One of the possible SBML component type codes.

LibSBML attaches an identifying code to every kind of SBML object. These are known as SBML type codes. In other languages, the set of type codes is stored in an enumeration; in the Java language interface for libSBML, the type codes are defined as static integer constants in the interface class libsbml. The names of the type codes all begin with the characters SBML_.

Each libSBML extension for SBML Level 3 packages adds its own type codes to objects. The present type code belongs to libSBML's extension to support the SBML Level 3 Qualitative Models (“qual”) package. It is used to identify the type of SBML component to which a given object corresponds.

libsbml.SBML_RATE_RULE = _libsbml.SBML_RATE_RULE

One of the possible SBML component type codes.

LibSBML attaches an identifying code to every kind of SBML object. These are known as SBML type codes. In other languages, the set of type codes is stored in an enumeration; in the Java language interface for libSBML, the type codes are defined as static integer constants in the interface class libsbml. The names of the type codes all begin with the characters SBML_.

libsbml.SBML_REACTION = _libsbml.SBML_REACTION

One of the possible SBML component type codes.

LibSBML attaches an identifying code to every kind of SBML object. These are known as SBML type codes. In other languages, the set of type codes is stored in an enumeration; in the Java language interface for libSBML, the type codes are defined as static integer constants in the interface class libsbml. The names of the type codes all begin with the characters SBML_.

libsbml.SBML_RENDER_COLORDEFINITION = _libsbml.SBML_RENDER_COLORDEFINITION

render A value in an enumeration defined by the libSBML “render” extension to implement functionality for the SBML Level 3 Render package.

libsbml.SBML_RENDER_CUBICBEZIER = _libsbml.SBML_RENDER_CUBICBEZIER

render A value in an enumeration defined by the libSBML “render” extension to implement functionality for the SBML Level 3 Render package.

libsbml.SBML_RENDER_CURVE = _libsbml.SBML_RENDER_CURVE

render A value in an enumeration defined by the libSBML “render” extension to implement functionality for the SBML Level 3 Render package.

libsbml.SBML_RENDER_DEFAULTS = _libsbml.SBML_RENDER_DEFAULTS

render A value in an enumeration defined by the libSBML “render” extension to implement functionality for the SBML Level 3 Render package.

libsbml.SBML_RENDER_ELLIPSE = _libsbml.SBML_RENDER_ELLIPSE

render A value in an enumeration defined by the libSBML “render” extension to implement functionality for the SBML Level 3 Render package.

libsbml.SBML_RENDER_GLOBALRENDERINFORMATION = _libsbml.SBML_RENDER_GLOBALRENDERINFORMATION

render A value in an enumeration defined by the libSBML “render” extension to implement functionality for the SBML Level 3 Render package.

libsbml.SBML_RENDER_GLOBALSTYLE = _libsbml.SBML_RENDER_GLOBALSTYLE

render A value in an enumeration defined by the libSBML “render” extension to implement functionality for the SBML Level 3 Render package.

libsbml.SBML_RENDER_GRADIENT_STOP = _libsbml.SBML_RENDER_GRADIENT_STOP

render A value in an enumeration defined by the libSBML “render” extension to implement functionality for the SBML Level 3 Render package.

libsbml.SBML_RENDER_GRADIENTDEFINITION = _libsbml.SBML_RENDER_GRADIENTDEFINITION

render A value in an enumeration defined by the libSBML “render” extension to implement functionality for the SBML Level 3 Render package.

libsbml.SBML_RENDER_GRAPHICALPRIMITIVE1D = _libsbml.SBML_RENDER_GRAPHICALPRIMITIVE1D

render A value in an enumeration defined by the libSBML “render” extension to implement functionality for the SBML Level 3 Render package.

libsbml.SBML_RENDER_GRAPHICALPRIMITIVE2D = _libsbml.SBML_RENDER_GRAPHICALPRIMITIVE2D

render A value in an enumeration defined by the libSBML “render” extension to implement functionality for the SBML Level 3 Render package.

libsbml.SBML_RENDER_GROUP = _libsbml.SBML_RENDER_GROUP

render A value in an enumeration defined by the libSBML “render” extension to implement functionality for the SBML Level 3 Render package.

libsbml.SBML_RENDER_IMAGE = _libsbml.SBML_RENDER_IMAGE

render A value in an enumeration defined by the libSBML “render” extension to implement functionality for the SBML Level 3 Render package.

libsbml.SBML_RENDER_LINEARGRADIENT = _libsbml.SBML_RENDER_LINEARGRADIENT

render A value in an enumeration defined by the libSBML “render” extension to implement functionality for the SBML Level 3 Render package.

libsbml.SBML_RENDER_LINEENDING = _libsbml.SBML_RENDER_LINEENDING

render A value in an enumeration defined by the libSBML “render” extension to implement functionality for the SBML Level 3 Render package.

libsbml.SBML_RENDER_LINESEGMENT = _libsbml.SBML_RENDER_LINESEGMENT

render A value in an enumeration defined by the libSBML “render” extension to implement functionality for the SBML Level 3 Render package.

libsbml.SBML_RENDER_LISTOFGLOBALSTYLES = _libsbml.SBML_RENDER_LISTOFGLOBALSTYLES

render A value in an enumeration defined by the libSBML “render” extension to implement functionality for the SBML Level 3 Render package.

libsbml.SBML_RENDER_LISTOFLOCALSTYLES = _libsbml.SBML_RENDER_LISTOFLOCALSTYLES

render A value in an enumeration defined by the libSBML “render” extension to implement functionality for the SBML Level 3 Render package.

libsbml.SBML_RENDER_LOCALRENDERINFORMATION = _libsbml.SBML_RENDER_LOCALRENDERINFORMATION

render A value in an enumeration defined by the libSBML “render” extension to implement functionality for the SBML Level 3 Render package.

libsbml.SBML_RENDER_LOCALSTYLE = _libsbml.SBML_RENDER_LOCALSTYLE

render A value in an enumeration defined by the libSBML “render” extension to implement functionality for the SBML Level 3 Render package.

libsbml.SBML_RENDER_POINT = _libsbml.SBML_RENDER_POINT

render A value in an enumeration defined by the libSBML “render” extension to implement functionality for the SBML Level 3 Render package.

libsbml.SBML_RENDER_POLYGON = _libsbml.SBML_RENDER_POLYGON

render A value in an enumeration defined by the libSBML “render” extension to implement functionality for the SBML Level 3 Render package.

libsbml.SBML_RENDER_RADIALGRADIENT = _libsbml.SBML_RENDER_RADIALGRADIENT

render A value in an enumeration defined by the libSBML “render” extension to implement functionality for the SBML Level 3 Render package.

libsbml.SBML_RENDER_RECTANGLE = _libsbml.SBML_RENDER_RECTANGLE

render A value in an enumeration defined by the libSBML “render” extension to implement functionality for the SBML Level 3 Render package.

libsbml.SBML_RENDER_RELABSVECTOR = _libsbml.SBML_RENDER_RELABSVECTOR

render A value in an enumeration defined by the libSBML “render” extension to implement functionality for the SBML Level 3 Render package.

libsbml.SBML_RENDER_RENDERINFORMATION_BASE = _libsbml.SBML_RENDER_RENDERINFORMATION_BASE

render A value in an enumeration defined by the libSBML “render” extension to implement functionality for the SBML Level 3 Render package.

libsbml.SBML_RENDER_STYLE_BASE = _libsbml.SBML_RENDER_STYLE_BASE

render A value in an enumeration defined by the libSBML “render” extension to implement functionality for the SBML Level 3 Render package.

libsbml.SBML_RENDER_TEXT = _libsbml.SBML_RENDER_TEXT

render A value in an enumeration defined by the libSBML “render” extension to implement functionality for the SBML Level 3 Render package.

libsbml.SBML_RENDER_TRANSFORMATION = _libsbml.SBML_RENDER_TRANSFORMATION

render A value in an enumeration defined by the libSBML “render” extension to implement functionality for the SBML Level 3 Render package.

libsbml.SBML_RENDER_TRANSFORMATION2D = _libsbml.SBML_RENDER_TRANSFORMATION2D

render A value in an enumeration defined by the libSBML “render” extension to implement functionality for the SBML Level 3 Render package.

libsbml.SBML_RULE = _libsbml.SBML_RULE

One of the possible SBML component type codes.

LibSBML attaches an identifying code to every kind of SBML object. These are known as SBML type codes. In other languages, the set of type codes is stored in an enumeration; in the Java language interface for libSBML, the type codes are defined as static integer constants in the interface class libsbml. The names of the type codes all begin with the characters SBML_.

libsbml.SBML_SPECIES = _libsbml.SBML_SPECIES

One of the possible SBML component type codes.

LibSBML attaches an identifying code to every kind of SBML object. These are known as SBML type codes. In other languages, the set of type codes is stored in an enumeration; in the Java language interface for libSBML, the type codes are defined as static integer constants in the interface class libsbml. The names of the type codes all begin with the characters SBML_.

libsbml.SBML_SPECIES_CONCENTRATION_RULE = _libsbml.SBML_SPECIES_CONCENTRATION_RULE

One of the possible SBML component type codes.

LibSBML attaches an identifying code to every kind of SBML object. These are known as SBML type codes. In other languages, the set of type codes is stored in an enumeration; in the Java language interface for libSBML, the type codes are defined as static integer constants in the interface class libsbml. The names of the type codes all begin with the characters SBML_.

libsbml.SBML_SPECIES_REFERENCE = _libsbml.SBML_SPECIES_REFERENCE

One of the possible SBML component type codes.

LibSBML attaches an identifying code to every kind of SBML object. These are known as SBML type codes. In other languages, the set of type codes is stored in an enumeration; in the Java language interface for libSBML, the type codes are defined as static integer constants in the interface class libsbml. The names of the type codes all begin with the characters SBML_.

libsbml.SBML_SPECIES_TYPE = _libsbml.SBML_SPECIES_TYPE

One of the possible SBML component type codes.

LibSBML attaches an identifying code to every kind of SBML object. These are known as SBML type codes. In other languages, the set of type codes is stored in an enumeration; in the Java language interface for libSBML, the type codes are defined as static integer constants in the interface class libsbml. The names of the type codes all begin with the characters SBML_.

libsbml.SBML_STOICHIOMETRY_MATH = _libsbml.SBML_STOICHIOMETRY_MATH

One of the possible SBML component type codes.

LibSBML attaches an identifying code to every kind of SBML object. These are known as SBML type codes. In other languages, the set of type codes is stored in an enumeration; in the Java language interface for libSBML, the type codes are defined as static integer constants in the interface class libsbml. The names of the type codes all begin with the characters SBML_.

libsbml.SBML_TRIGGER = _libsbml.SBML_TRIGGER

One of the possible SBML component type codes.

LibSBML attaches an identifying code to every kind of SBML object. These are known as SBML type codes. In other languages, the set of type codes is stored in an enumeration; in the Java language interface for libSBML, the type codes are defined as static integer constants in the interface class libsbml. The names of the type codes all begin with the characters SBML_.

libsbml.SBML_UNIT = _libsbml.SBML_UNIT

One of the possible SBML component type codes.

LibSBML attaches an identifying code to every kind of SBML object. These are known as SBML type codes. In other languages, the set of type codes is stored in an enumeration; in the Java language interface for libSBML, the type codes are defined as static integer constants in the interface class libsbml. The names of the type codes all begin with the characters SBML_.

libsbml.SBML_UNIT_DEFINITION = _libsbml.SBML_UNIT_DEFINITION

One of the possible SBML component type codes.

LibSBML attaches an identifying code to every kind of SBML object. These are known as SBML type codes. In other languages, the set of type codes is stored in an enumeration; in the Java language interface for libSBML, the type codes are defined as static integer constants in the interface class libsbml. The names of the type codes all begin with the characters SBML_.

libsbml.SBML_UNKNOWN = _libsbml.SBML_UNKNOWN

One of the possible SBML component type codes.

LibSBML attaches an identifying code to every kind of SBML object. These are known as SBML type codes. In other languages, the set of type codes is stored in an enumeration; in the Java language interface for libSBML, the type codes are defined as static integer constants in the interface class libsbml. The names of the type codes all begin with the characters SBML_.

libsbml.SBMLCodesUpperBound = _libsbml.SBMLCodesUpperBound

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.SBMLNamespaceInAnnotation = _libsbml.SBMLNamespaceInAnnotation

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.SBOTermNotUniversalInL2v2 = _libsbml.SBOTermNotUniversalInL2v2

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.SBOTermNotValidAttributeBeforeL2V2 = _libsbml.SBOTermNotValidAttributeBeforeL2V2

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.SBOTermNotValidAttributeBeforeL2V3 = _libsbml.SBOTermNotValidAttributeBeforeL2V3

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.SpatialSizeUnitsNotValidAttribute = _libsbml.SpatialSizeUnitsNotValidAttribute

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.SpatialSizeUnitsRemoved = _libsbml.SpatialSizeUnitsRemoved

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.SpatialUnitsInOneD = _libsbml.SpatialUnitsInOneD

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.SpatialUnitsInThreeD = _libsbml.SpatialUnitsInThreeD

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.SpatialUnitsInTwoD = _libsbml.SpatialUnitsInTwoD

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.SPECIES_ROLE_ACTIVATOR = _libsbml.SPECIES_ROLE_ACTIVATOR

layout One of the possible roles of a SpeciesReferenceGlyph.

SpeciesReferenceGlyphs include an attribute to describe the role of a given SpeciesReference in a model diagram. The present code is one of the possible values for this role attribute.

libsbml.SPECIES_ROLE_INHIBITOR = _libsbml.SPECIES_ROLE_INHIBITOR

layout One of the possible roles of a SpeciesReferenceGlyph.

SpeciesReferenceGlyphs include an attribute to describe the role of a given SpeciesReference in a model diagram. The present code is one of the possible values for this role attribute.

libsbml.SPECIES_ROLE_INVALID = _libsbml.SPECIES_ROLE_INVALID

layout One of the possible roles of a SpeciesReferenceGlyph.

SpeciesReferenceGlyphs include an attribute to describe the role of a given SpeciesReference in a model diagram. The present code is one of the possible values for this role attribute.

libsbml.SPECIES_ROLE_MODIFIER = _libsbml.SPECIES_ROLE_MODIFIER

layout One of the possible roles of a SpeciesReferenceGlyph.

SpeciesReferenceGlyphs include an attribute to describe the role of a given SpeciesReference in a model diagram. The present code is one of the possible values for this role attribute.

libsbml.SPECIES_ROLE_PRODUCT = _libsbml.SPECIES_ROLE_PRODUCT

layout One of the possible roles of a SpeciesReferenceGlyph.

SpeciesReferenceGlyphs include an attribute to describe the role of a given SpeciesReference in a model diagram. The present code is one of the possible values for this role attribute.

libsbml.SPECIES_ROLE_SIDEPRODUCT = _libsbml.SPECIES_ROLE_SIDEPRODUCT

layout One of the possible roles of a SpeciesReferenceGlyph.

SpeciesReferenceGlyphs include an attribute to describe the role of a given SpeciesReference in a model diagram. The present code is one of the possible values for this role attribute.

libsbml.SPECIES_ROLE_SIDESUBSTRATE = _libsbml.SPECIES_ROLE_SIDESUBSTRATE

layout One of the possible roles of a SpeciesReferenceGlyph.

SpeciesReferenceGlyphs include an attribute to describe the role of a given SpeciesReference in a model diagram. The present code is one of the possible values for this role attribute.

libsbml.SPECIES_ROLE_SUBSTRATE = _libsbml.SPECIES_ROLE_SUBSTRATE

layout One of the possible roles of a SpeciesReferenceGlyph.

SpeciesReferenceGlyphs include an attribute to describe the role of a given SpeciesReference in a model diagram. The present code is one of the possible values for this role attribute.

libsbml.SPECIES_ROLE_UNDEFINED = _libsbml.SPECIES_ROLE_UNDEFINED

long

layout One of the possible roles of a SpeciesReferenceGlyph.

SpeciesReferenceGlyphs include an attribute to describe the role of a given SpeciesReference in a model diagram. The present code is one of the possible values for this role attribute.

libsbml.SpeciesCompartmentRequiredInL1 = _libsbml.SpeciesCompartmentRequiredInL1

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.SpeciesInvalidExtentUnits = _libsbml.SpeciesInvalidExtentUnits

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.SpeciesRefIdInMathMLNotSupported = _libsbml.SpeciesRefIdInMathMLNotSupported

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.SpeciesShouldHaveValue = _libsbml.SpeciesShouldHaveValue

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.SpeciesTypeNotValidAttribute = _libsbml.SpeciesTypeNotValidAttribute

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.SpeciesTypeNotValidComponent = _libsbml.SpeciesTypeNotValidComponent

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.StoichiometryMathMissingMath = _libsbml.StoichiometryMathMissingMath

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.StoichiometryMathNotValidComponent = _libsbml.StoichiometryMathNotValidComponent

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.StoichiometryMathNotYetSupported = _libsbml.StoichiometryMathNotYetSupported

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.StrictSBORequiredInL2v2 = _libsbml.StrictSBORequiredInL2v2

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.StrictSBORequiredInL2v3 = _libsbml.StrictSBORequiredInL2v3

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.StrictUnitsRequiredInL1 = _libsbml.StrictUnitsRequiredInL1

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.StrictUnitsRequiredInL2v1 = _libsbml.StrictUnitsRequiredInL2v1

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.StrictUnitsRequiredInL2v2 = _libsbml.StrictUnitsRequiredInL2v2

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.StrictUnitsRequiredInL2v3 = _libsbml.StrictUnitsRequiredInL2v3

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.SubstanceUnitsOnSpecies = _libsbml.SubstanceUnitsOnSpecies

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.SubsUnitsAllowedInKL = _libsbml.SubsUnitsAllowedInKL

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.SubsUnitsNoLongerValid = _libsbml.SubsUnitsNoLongerValid

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.ThreeDimensionalCompartmentUnits = _libsbml.ThreeDimensionalCompartmentUnits

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.TimeUnitsAllowedInKL = _libsbml.TimeUnitsAllowedInKL

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.TimeUnitsEvent = _libsbml.TimeUnitsEvent

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.TimeUnitsNoLongerValid = _libsbml.TimeUnitsNoLongerValid

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.TimeUnitsRemoved = _libsbml.TimeUnitsRemoved

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.TriggerMathNotBoolean = _libsbml.TriggerMathNotBoolean

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.TwoDimensionalCompartmentUnits = _libsbml.TwoDimensionalCompartmentUnits

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.UnclosedXMLToken = _libsbml.UnclosedXMLToken

A value in the enumeration of all the error and warning codes returned by the XML layer in libSBML.

Please consult the documentation for XMLError for an explanation of the meaning of this particular error code.

libsbml.UndeclaredExtentUnitsL3 = _libsbml.UndeclaredExtentUnitsL3

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.UndeclaredObjectUnitsL3 = _libsbml.UndeclaredObjectUnitsL3

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.UndeclaredSpeciesInStoichMath = _libsbml.UndeclaredSpeciesInStoichMath

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.UndeclaredSpeciesRef = _libsbml.UndeclaredSpeciesRef

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.UndeclaredTimeUnitsL3 = _libsbml.UndeclaredTimeUnitsL3

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.UndeclaredUnits = _libsbml.UndeclaredUnits

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.UndefinedOutsideCompartment = _libsbml.UndefinedOutsideCompartment

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.UndefinedXMLEntity = _libsbml.UndefinedXMLEntity

A value in the enumeration of all the error and warning codes returned by the XML layer in libSBML.

Please consult the documentation for XMLError for an explanation of the meaning of this particular error code.

libsbml.UninterpretableXMLContent = _libsbml.UninterpretableXMLContent

A value in the enumeration of all the error and warning codes returned by the XML layer in libSBML.

Please consult the documentation for XMLError for an explanation of the meaning of this particular error code.

libsbml.UNIT_KIND_AMPERE = _libsbml.UNIT_KIND_AMPERE

One of the possible predefined SBML units.

libsbml.UNIT_KIND_AVOGADRO = _libsbml.UNIT_KIND_AVOGADRO

One of the possible predefined SBML units.

libsbml.UNIT_KIND_BECQUEREL = _libsbml.UNIT_KIND_BECQUEREL

One of the possible predefined SBML units.

libsbml.UNIT_KIND_CANDELA = _libsbml.UNIT_KIND_CANDELA

One of the possible predefined SBML units.

libsbml.UNIT_KIND_CELSIUS = _libsbml.UNIT_KIND_CELSIUS

One of the possible predefined SBML units.

libsbml.UNIT_KIND_COULOMB = _libsbml.UNIT_KIND_COULOMB

One of the possible predefined SBML units.

libsbml.UNIT_KIND_DIMENSIONLESS = _libsbml.UNIT_KIND_DIMENSIONLESS

One of the possible predefined SBML units.

libsbml.UNIT_KIND_FARAD = _libsbml.UNIT_KIND_FARAD

One of the possible predefined SBML units.

libsbml.UNIT_KIND_GRAM = _libsbml.UNIT_KIND_GRAM

One of the possible predefined SBML units.

libsbml.UNIT_KIND_GRAY = _libsbml.UNIT_KIND_GRAY

One of the possible predefined SBML units.

libsbml.UNIT_KIND_HENRY = _libsbml.UNIT_KIND_HENRY

One of the possible predefined SBML units.

libsbml.UNIT_KIND_HERTZ = _libsbml.UNIT_KIND_HERTZ

One of the possible predefined SBML units.

libsbml.UNIT_KIND_INVALID = _libsbml.UNIT_KIND_INVALID

One of the possible predefined SBML units.

libsbml.UNIT_KIND_ITEM = _libsbml.UNIT_KIND_ITEM

One of the possible predefined SBML units.

libsbml.UNIT_KIND_JOULE = _libsbml.UNIT_KIND_JOULE

One of the possible predefined SBML units.

libsbml.UNIT_KIND_KATAL = _libsbml.UNIT_KIND_KATAL

One of the possible predefined SBML units.

libsbml.UNIT_KIND_KELVIN = _libsbml.UNIT_KIND_KELVIN

One of the possible predefined SBML units.

libsbml.UNIT_KIND_KILOGRAM = _libsbml.UNIT_KIND_KILOGRAM

One of the possible predefined SBML units.

libsbml.UNIT_KIND_LITER = _libsbml.UNIT_KIND_LITER

One of the possible predefined SBML units.

libsbml.UNIT_KIND_LITRE = _libsbml.UNIT_KIND_LITRE

One of the possible predefined SBML units.

libsbml.UNIT_KIND_LUMEN = _libsbml.UNIT_KIND_LUMEN

One of the possible predefined SBML units.

libsbml.UNIT_KIND_LUX = _libsbml.UNIT_KIND_LUX

One of the possible predefined SBML units.

libsbml.UNIT_KIND_METER = _libsbml.UNIT_KIND_METER

One of the possible predefined SBML units.

libsbml.UNIT_KIND_METRE = _libsbml.UNIT_KIND_METRE

One of the possible predefined SBML units.

libsbml.UNIT_KIND_MOLE = _libsbml.UNIT_KIND_MOLE

One of the possible predefined SBML units.

libsbml.UNIT_KIND_NEWTON = _libsbml.UNIT_KIND_NEWTON

One of the possible predefined SBML units.

libsbml.UNIT_KIND_OHM = _libsbml.UNIT_KIND_OHM

One of the possible predefined SBML units.

libsbml.UNIT_KIND_PASCAL = _libsbml.UNIT_KIND_PASCAL

One of the possible predefined SBML units.

libsbml.UNIT_KIND_RADIAN = _libsbml.UNIT_KIND_RADIAN

One of the possible predefined SBML units.

libsbml.UNIT_KIND_SECOND = _libsbml.UNIT_KIND_SECOND

One of the possible predefined SBML units.

libsbml.UNIT_KIND_SIEMENS = _libsbml.UNIT_KIND_SIEMENS

One of the possible predefined SBML units.

libsbml.UNIT_KIND_SIEVERT = _libsbml.UNIT_KIND_SIEVERT

One of the possible predefined SBML units.

libsbml.UNIT_KIND_STERADIAN = _libsbml.UNIT_KIND_STERADIAN

One of the possible predefined SBML units.

libsbml.UNIT_KIND_TESLA = _libsbml.UNIT_KIND_TESLA

One of the possible predefined SBML units.

libsbml.UNIT_KIND_VOLT = _libsbml.UNIT_KIND_VOLT

One of the possible predefined SBML units.

libsbml.UNIT_KIND_WATT = _libsbml.UNIT_KIND_WATT

One of the possible predefined SBML units.

libsbml.UNIT_KIND_WEBER = _libsbml.UNIT_KIND_WEBER

One of the possible predefined SBML units.

libsbml.UnitsNotValidAttribute = _libsbml.UnitsNotValidAttribute

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.UNKNOWN_ASSOCIATION = _libsbml.UNKNOWN_ASSOCIATION

fbc One of the possible Association types.

The Association class is not part of the official SBML Level 3 Flux Balance Constraints specification, but is instead a proposed future development of the package. If adopted, it would be a child of a GeneAssociation that would describe a single 'and' or 'or' relationship between two or more genes or other associations.

The present code is one of the possible Association types for this proposed SBML Level 3 Flux Balance Constraints (“fbc”) package future development.

libsbml.UNKNOWN_QUALIFIER = _libsbml.UNKNOWN_QUALIFIER

One of the possible MIRIAM annotation types used by CVTerm.

libsbml.UnknownCoreAttribute = _libsbml.UnknownCoreAttribute

Encountered an unknow attribute in the core SBML Level 3 namespace.

libsbml.UnknownError = _libsbml.UnknownError

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.UnknownPackageAttribute = _libsbml.UnknownPackageAttribute

Encountered an unknown attribute in an SBML Level 3 package namespace.

libsbml.UnrecognisedSBOTerm = _libsbml.UnrecognisedSBOTerm

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.UnrecognizedElement = _libsbml.UnrecognizedElement

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.UnrecognizedXMLElement = _libsbml.UnrecognizedXMLElement

A value in the enumeration of all the error and warning codes returned by the XML layer in libSBML.

Please consult the documentation for XMLError for an explanation of the meaning of this particular error code.

libsbml.UnrecognizedXMLParserCode = _libsbml.UnrecognizedXMLParserCode

A value in the enumeration of all the error and warning codes returned by the XML layer in libSBML.

Please consult the documentation for XMLError for an explanation of the meaning of this particular error code.

libsbml.UnrequiredPackagePresent = _libsbml.UnrequiredPackagePresent

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.UpperUnitBound = _libsbml.UpperUnitBound

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.V_TEXTANCHOR_BASELINE = _libsbml.V_TEXTANCHOR_BASELINE

render A value in an enumeration defined by the libSBML “render” extension to implement functionality for the SBML Level 3 Render package.

libsbml.V_TEXTANCHOR_BOTTOM = _libsbml.V_TEXTANCHOR_BOTTOM

render A value in an enumeration defined by the libSBML “render” extension to implement functionality for the SBML Level 3 Render package.

libsbml.V_TEXTANCHOR_INVALID = _libsbml.V_TEXTANCHOR_INVALID

render A value in an enumeration defined by the libSBML “render” extension to implement functionality for the SBML Level 3 Render package.

libsbml.V_TEXTANCHOR_MIDDLE = _libsbml.V_TEXTANCHOR_MIDDLE

render A value in an enumeration defined by the libSBML “render” extension to implement functionality for the SBML Level 3 Render package.

libsbml.V_TEXTANCHOR_TOP = _libsbml.V_TEXTANCHOR_TOP

render A value in an enumeration defined by the libSBML “render” extension to implement functionality for the SBML Level 3 Render package.

libsbml.V_TEXTANCHOR_UNSET = _libsbml.V_TEXTANCHOR_UNSET

render A value in an enumeration defined by the libSBML “render” extension to implement functionality for the SBML Level 3 Render package.

libsbml.ValuesFromTriggerTimeNeedDelay = _libsbml.ValuesFromTriggerTimeNeedDelay

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.VariableNotValidAttribute = _libsbml.VariableNotValidAttribute

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.VersionPositiveInteger = _libsbml.VersionPositiveInteger

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.VolumeLitreDefExponentNotOne = _libsbml.VolumeLitreDefExponentNotOne

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.VolumeMetreDefExponentNot3 = _libsbml.VolumeMetreDefExponentNot3

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.XMLAttributeTypeMismatch = _libsbml.XMLAttributeTypeMismatch

A value in the enumeration of all the error and warning codes returned by the XML layer in libSBML.

Please consult the documentation for XMLError for an explanation of the meaning of this particular error code.

libsbml.XMLBadColon = _libsbml.XMLBadColon

A value in the enumeration of all the error and warning codes returned by the XML layer in libSBML.

Please consult the documentation for XMLError for an explanation of the meaning of this particular error code.

libsbml.XMLBadNumber = _libsbml.XMLBadNumber

A value in the enumeration of all the error and warning codes returned by the XML layer in libSBML.

Please consult the documentation for XMLError for an explanation of the meaning of this particular error code.

libsbml.XMLBadUTF8Content = _libsbml.XMLBadUTF8Content

A value in the enumeration of all the error and warning codes returned by the XML layer in libSBML.

Please consult the documentation for XMLError for an explanation of the meaning of this particular error code.

libsbml.XMLContentEmpty = _libsbml.XMLContentEmpty

A value in the enumeration of all the error and warning codes returned by the XML layer in libSBML.

Please consult the documentation for XMLError for an explanation of the meaning of this particular error code.

libsbml.XMLEmptyValueNotPermitted = _libsbml.XMLEmptyValueNotPermitted

A value in the enumeration of all the error and warning codes returned by the XML layer in libSBML.

Please consult the documentation for XMLError for an explanation of the meaning of this particular error code.

libsbml.XMLErrorCodesUpperBound = _libsbml.XMLErrorCodesUpperBound

A value in the enumeration of all the error and warning codes returned by the XML layer in libSBML.

Please consult the documentation for XMLError for an explanation of the meaning of this particular error code.

libsbml.XMLExpectedQuotedString = _libsbml.XMLExpectedQuotedString

A value in the enumeration of all the error and warning codes returned by the XML layer in libSBML.

Please consult the documentation for XMLError for an explanation of the meaning of this particular error code.

libsbml.XMLFileOperationError = _libsbml.XMLFileOperationError

A value in the enumeration of all the error and warning codes returned by the XML layer in libSBML.

Please consult the documentation for XMLError for an explanation of the meaning of this particular error code.

libsbml.XMLFileUnreadable = _libsbml.XMLFileUnreadable

A value in the enumeration of all the error and warning codes returned by the XML layer in libSBML.

Please consult the documentation for XMLError for an explanation of the meaning of this particular error code.

libsbml.XMLFileUnwritable = _libsbml.XMLFileUnwritable

A value in the enumeration of all the error and warning codes returned by the XML layer in libSBML.

Please consult the documentation for XMLError for an explanation of the meaning of this particular error code.

libsbml.XMLNetworkAccessError = _libsbml.XMLNetworkAccessError

A value in the enumeration of all the error and warning codes returned by the XML layer in libSBML.

Please consult the documentation for XMLError for an explanation of the meaning of this particular error code.

libsbml.XMLOutOfMemory = _libsbml.XMLOutOfMemory

A value in the enumeration of all the error and warning codes returned by the XML layer in libSBML.

Please consult the documentation for XMLError for an explanation of the meaning of this particular error code.

libsbml.XMLTagMismatch = _libsbml.XMLTagMismatch

A value in the enumeration of all the error and warning codes returned by the XML layer in libSBML.

Please consult the documentation for XMLError for an explanation of the meaning of this particular error code.

libsbml.XMLTranscoderError = _libsbml.XMLTranscoderError

A value in the enumeration of all the error and warning codes returned by the XML layer in libSBML.

Please consult the documentation for XMLError for an explanation of the meaning of this particular error code.

libsbml.XMLUnexpectedEOF = _libsbml.XMLUnexpectedEOF

A value in the enumeration of all the error and warning codes returned by the XML layer in libSBML.

Please consult the documentation for XMLError for an explanation of the meaning of this particular error code.

libsbml.XMLUnknownError = _libsbml.XMLUnknownError

A value in the enumeration of all the error and warning codes returned by the XML layer in libSBML.

Please consult the documentation for XMLError for an explanation of the meaning of this particular error code.

libsbml.ZeroDCompartmentContainment = _libsbml.ZeroDCompartmentContainment

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.ZeroDimensionalCompartmentConst = _libsbml.ZeroDimensionalCompartmentConst

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.ZeroDimensionalCompartmentSize = _libsbml.ZeroDimensionalCompartmentSize

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.

libsbml.ZeroDimensionalCompartmentUnits = _libsbml.ZeroDimensionalCompartmentUnits

A value in the enumeration of all the SBML error and warning codes for objects of class SBMLError.

Please consult the documentation for SBMLError for an explanation of the meaning of this particular error code.