A B C D E F G H I J K L M N O P Q R S T U V W X Y Z

D

data - Static variable in class org.sbml.jsbml.ext.spatial.SpatialConstants

DataKind - Enum in org.sbml.jsbml.ext.spatial

This enum type was created following the specifications defined in Spatial Package v0.90.

dataType - Static variable in class org.sbml.jsbml.ext.spatial.SpatialConstants

DateProcessor - Class in org.sbml.jsbml.xml.stax

Format time to W3DTF

DateProcessor() - Constructor for class org.sbml.jsbml.xml.stax.DateProcessor

debug(String) - Method in class org.sbml.jsbml.xml.stax.XMLLogger

debugStream - Variable in class org.sbml.jsbml.math.parser.FormulaParserASTNode2TokenManager

Debug output.

debugStream - Variable in class org.sbml.jsbml.math.parser.FormulaParserLL3ASTNode2TokenManager

Debug output.

debugStream - Variable in class org.sbml.jsbml.math.parser.FormulaParserLL3TokenManager

Debug output.

debugStream - Variable in class org.sbml.jsbml.math.parser.FormulaParserTokenManager

Debug output.

debugStream - Variable in class org.sbml.jsbml.text.parser.CobraFormulaParserTokenManager

Debug output.

debugStream - Variable in class org.sbml.jsbml.text.parser.FormulaParserASTNode2TokenManager

Debug output.

debugStream - Variable in class org.sbml.jsbml.text.parser.FormulaParserLL3ASTNode2TokenManager

Debug output.

debugStream - Variable in class org.sbml.jsbml.text.parser.FormulaParserLL3TokenManager

Debug output.

debugStream - Variable in class org.sbml.jsbml.text.parser.FormulaParserTokenManager

Debug output.

DECIMAL_FORMAT - Static variable in class org.sbml.jsbml.util.StringTools

decodeStringToArrayDouble(String) - Static method in class org.sbml.jsbml.ext.render.XMLTools

decodeStringToArrayShort(String) - Static method in class org.sbml.jsbml.ext.render.XMLTools

decodeStringToColor(String) - Static method in class org.sbml.jsbml.ext.render.XMLTools

DEFAULT - Static variable in interface org.sbml.jsbml.math.parser.FormulaParserASTNode2Constants

Lexical state.

DEFAULT - Static variable in interface org.sbml.jsbml.math.parser.FormulaParserConstants

Lexical state.

DEFAULT - Static variable in interface org.sbml.jsbml.math.parser.FormulaParserLL3ASTNode2Constants

Lexical state.

DEFAULT - Static variable in interface org.sbml.jsbml.math.parser.FormulaParserLL3Constants

Lexical state.

DEFAULT - Static variable in interface org.sbml.jsbml.text.parser.CobraFormulaParserConstants

Lexical state.

DEFAULT - Static variable in interface org.sbml.jsbml.text.parser.FormulaParserASTNode2Constants

Lexical state.

DEFAULT - Static variable in interface org.sbml.jsbml.text.parser.FormulaParserConstants

Lexical state.

DEFAULT - Static variable in interface org.sbml.jsbml.text.parser.FormulaParserLL3ASTNode2Constants

Lexical state.

DEFAULT - Static variable in interface org.sbml.jsbml.text.parser.FormulaParserLL3Constants

Lexical state.

definitionURL - Static variable in class org.sbml.jsbml.util.TreeNodeChangeEvent

Delay - Class in org.sbml.jsbml

Represents the delay subnode of an event element.

Delay() - Constructor for class org.sbml.jsbml.Delay

Creates a Delay instance.

Delay(ASTNode, int, int) - Constructor for class org.sbml.jsbml.Delay

Creates a Delay instance from an ASTNode, level and version.

Delay(Delay) - Constructor for class org.sbml.jsbml.Delay

Creates a Delay instance from a given Delay.

Delay(int, int) - Constructor for class org.sbml.jsbml.Delay

Creates a Delay instance from a level and version.

delay(String, ASTNode, ASTNode, String) - Method in class org.sbml.jsbml.ext.arrays.compiler.ArraysCompiler

delay(String, ASTNode, ASTNode, String) - Method in class org.sbml.jsbml.ext.arrays.compiler.StaticallyComputableCompiler

delay(String, ASTNode, ASTNode, String) - Method in class org.sbml.jsbml.ext.arrays.compiler.VectorCompiler

delay(String, ASTNode2, ASTNode2) - Method in interface org.sbml.jsbml.math.compiler.ASTNode2Compiler

Evaluates delay functions.

delay(String, ASTNode2, ASTNode2) - Method in class org.sbml.jsbml.math.compiler.FindUnitsCompiler

delay(String, ASTNode2, ASTNode2) - Method in class org.sbml.jsbml.math.compiler.FormulaCompiler

delay(String, ASTNode2, ASTNode2) - Method in class org.sbml.jsbml.math.compiler.LaTeXCompiler

delay(String, ASTNode2, ASTNode2) - Method in class org.sbml.jsbml.math.compiler.UnitsCompiler

delay(String, ASTNode, ASTNode, String) - Method in interface org.sbml.jsbml.util.compilers.ASTNodeCompiler

Evaluates delay functions.

delay(String, ASTNode, ASTNode, String) - Method in class org.sbml.jsbml.util.compilers.FindUnitsCompiler

delay(String, ASTNode, ASTNode, String) - Method in class org.sbml.jsbml.util.compilers.FormulaCompiler

delay(String, ASTNode, ASTNode, String) - Method in class org.sbml.jsbml.util.compilers.LaTeXCompiler

delay(String, ASTNode, ASTNode, String) - Method in class org.sbml.jsbml.util.compilers.MathMLCompiler

Deprecated.

delay(String, ASTNode, ASTNode, String) - Method in class org.sbml.jsbml.util.compilers.UnitsCompiler

deletion - Static variable in class org.sbml.jsbml.ext.comp.CompConstants

Deletion - Class in org.sbml.jsbml.ext.comp

The Deletion object class is used to define a deletion operation to be applied when a submodel instantiates a model definition.

Deletion() - Constructor for class org.sbml.jsbml.ext.comp.Deletion

Creates an Deletion instance

Deletion(String) - Constructor for class org.sbml.jsbml.ext.comp.Deletion

Creates a Deletion instance with an id.

Deletion(int, int) - Constructor for class org.sbml.jsbml.ext.comp.Deletion

Creates a Deletion instance with a level and version.

Deletion(String, int, int) - Constructor for class org.sbml.jsbml.ext.comp.Deletion

Creates a Deletion instance with an id, level, and version.

Deletion(String, String, int, int) - Constructor for class org.sbml.jsbml.ext.comp.Deletion

Creates a Deletion instance with an id, name, level, and version.

Deletion(Deletion) - Constructor for class org.sbml.jsbml.ext.comp.Deletion

Clone constructor

denominator - Static variable in class org.sbml.jsbml.util.TreeNodeChangeEvent

DenotedSpeciesTypeComponentIndex - Class in org.sbml.jsbml.ext.multi

Class removed from the draft specs 1.0 release 0.5 (2015-11-27)

DenotedSpeciesTypeComponentIndex() - Constructor for class org.sbml.jsbml.ext.multi.DenotedSpeciesTypeComponentIndex

Creates an DenotedSpeciesTypeComponentIndex instance

DenotedSpeciesTypeComponentIndex(int, int) - Constructor for class org.sbml.jsbml.ext.multi.DenotedSpeciesTypeComponentIndex

Creates a DenotedSpeciesTypeComponentIndex instance with a level and version.

DenotedSpeciesTypeComponentIndex(DenotedSpeciesTypeComponentIndex) - Constructor for class org.sbml.jsbml.ext.multi.DenotedSpeciesTypeComponentIndex

Clone constructor

denotedSpeciesTypeComponentIndex - Static variable in class org.sbml.jsbml.ext.multi.MultiConstants

depth - Static variable in class org.sbml.jsbml.ext.layout.LayoutConstants

deriveUnit() - Method in class org.sbml.jsbml.ASTNode

Evaluates recursively this ASTNode and creates a new UnitDefinition with respect of all referenced elements.

deriveUnit() - Method in class org.sbml.jsbml.math.ASTCnNumberNode

Evaluates recursively this ASTCnNumberNode and creates a new UnitDefinition with respect to all referenced elements.

descriptionBegin - Static variable in class org.sbml.jsbml.math.compiler.LaTeXCompiler

Surrounded by new line symbols.

descriptionBegin - Static variable in class org.sbml.jsbml.util.compilers.LaTeXCompiler

Surrounded by new line symbols.

descriptionEnd - Static variable in class org.sbml.jsbml.math.compiler.LaTeXCompiler

Surrounded by new line symbols.

descriptionEnd - Static variable in class org.sbml.jsbml.util.compilers.LaTeXCompiler

Surrounded by new line symbols.

descriptionItem(String, Object) - Method in class org.sbml.jsbml.math.compiler.LaTeXCompiler

This method simplifies the process of creating descriptions.

descriptionItem(String, Object) - Method in class org.sbml.jsbml.util.compilers.LaTeXCompiler

This method simplifies the process of creating descriptions.

Detail - Class in org.sbml.jsbml.util

Detail() - Constructor for class org.sbml.jsbml.util.Detail

diff(ASTNode...) - Static method in class org.sbml.jsbml.ASTNode

Creates a new ASTNode of type MINUS and adds the given nodes as children

diff(ASTNode2...) - Static method in class org.sbml.jsbml.math.ASTFactory

Creates a new ASTArithmeticOperatorNode of type MINUS and adds the given nodes as children.

diff(Object...) - Static method in class org.sbml.jsbml.math.compiler.FormulaCompiler

Returns the difference of the given elements as StringBuffer.

diff(Object...) - Static method in class org.sbml.jsbml.util.compilers.FormulaCompiler

Returns the difference of the given elements as StringBuffer.

DiffusionCoefficient - Class in org.sbml.jsbml.ext.spatial

DiffusionCoefficient() - Constructor for class org.sbml.jsbml.ext.spatial.DiffusionCoefficient

DiffusionCoefficient(DiffusionCoefficient) - Constructor for class org.sbml.jsbml.ext.spatial.DiffusionCoefficient

DiffusionCoefficient(int, int) - Constructor for class org.sbml.jsbml.ext.spatial.DiffusionCoefficient

DiffusionCoefficient(String, int, int) - Constructor for class org.sbml.jsbml.ext.spatial.DiffusionCoefficient

diffusionCoefficient - Static variable in class org.sbml.jsbml.ext.spatial.SpatialConstants

DiffusionKind - Enum in org.sbml.jsbml.ext.spatial

This enum type was created following the specifications defined in Spatial Package v0.90.

diffusionKind - Static variable in class org.sbml.jsbml.ext.spatial.SpatialConstants

DIGIT - Static variable in interface org.sbml.jsbml.math.parser.FormulaParserASTNode2Constants

RegularExpression Id.

DIGIT - Static variable in interface org.sbml.jsbml.math.parser.FormulaParserConstants

RegularExpression Id.

DIGIT - Static variable in interface org.sbml.jsbml.math.parser.FormulaParserLL3ASTNode2Constants

RegularExpression Id.

DIGIT - Static variable in interface org.sbml.jsbml.math.parser.FormulaParserLL3Constants

RegularExpression Id.

DIGIT - Static variable in interface org.sbml.jsbml.text.parser.CobraFormulaParserConstants

RegularExpression Id.

DIGIT - Static variable in interface org.sbml.jsbml.text.parser.FormulaParserASTNode2Constants

RegularExpression Id.

DIGIT - Static variable in interface org.sbml.jsbml.text.parser.FormulaParserConstants

RegularExpression Id.

DIGIT - Static variable in interface org.sbml.jsbml.text.parser.FormulaParserLL3ASTNode2Constants

RegularExpression Id.

DIGIT - Static variable in interface org.sbml.jsbml.text.parser.FormulaParserLL3Constants

RegularExpression Id.

dimension - Static variable in class org.sbml.jsbml.ext.arrays.ArraysConstants

Dimension - Class in org.sbml.jsbml.ext.arrays

The Dimension is used to indicate the parent SBase is arrayed.

Dimension() - Constructor for class org.sbml.jsbml.ext.arrays.Dimension

Creates an Dimension instance

Dimension(String) - Constructor for class org.sbml.jsbml.ext.arrays.Dimension

Creates a Dimension instance with an id.

Dimension(int, int) - Constructor for class org.sbml.jsbml.ext.arrays.Dimension

Creates a Dimension instance with a level and version.

Dimension(String, int, int) - Constructor for class org.sbml.jsbml.ext.arrays.Dimension

Creates a Dimension instance with an id, level, and version.

Dimension(String, String, int, int) - Constructor for class org.sbml.jsbml.ext.arrays.Dimension

Creates a Dimension instance with an id, name, level, and version.

Dimension(Dimension) - Constructor for class org.sbml.jsbml.ext.arrays.Dimension

Clone constructor

DimensionArrayDimCheck - Class in org.sbml.jsbml.ext.arrays.validator.constraints

This checks if the Dimension objects of a given SBase have valid array dimension.

DimensionArrayDimCheck(Model, SBase) - Constructor for class org.sbml.jsbml.ext.arrays.validator.constraints.DimensionArrayDimCheck

Constructs a DimensionArrayDimCheck with a model and sbase.

DimensionIDCheck - Class in org.sbml.jsbml.ext.arrays.validator.constraints

DimensionIDCheck(Model, SBase) - Constructor for class org.sbml.jsbml.ext.arrays.validator.constraints.DimensionIDCheck

Dimensions - Class in org.sbml.jsbml.ext.layout

A Dimensions is specified via the required attributes width, height and an optional attribute depth, all of which are of type double.

Dimensions() - Constructor for class org.sbml.jsbml.ext.layout.Dimensions

Dimensions(Dimensions) - Constructor for class org.sbml.jsbml.ext.layout.Dimensions

Dimensions(double, double, double, int, int) - Constructor for class org.sbml.jsbml.ext.layout.Dimensions

Dimensions(int, int) - Constructor for class org.sbml.jsbml.ext.layout.Dimensions

Dimensions(String, int, int) - Constructor for class org.sbml.jsbml.ext.layout.Dimensions

dimensions - Static variable in class org.sbml.jsbml.ext.layout.LayoutConstants

DimensionSizeCheck - Class in org.sbml.jsbml.ext.arrays.validator.constraints

Checks if the given Dimension object has size that is both scalar and constant.

DimensionSizeCheck(Model, Dimension) - Constructor for class org.sbml.jsbml.ext.arrays.validator.constraints.DimensionSizeCheck

DimensionValidator - Class in org.sbml.jsbml.ext.arrays.validator

This validates a given Dimension object in the context of a given model and makes sure that the dimension object is in accordance with the arrays package specification.

DimensionValidator() - Constructor for class org.sbml.jsbml.ext.arrays.validator.DimensionValidator

disable_tracing() - Method in class org.sbml.jsbml.math.parser.FormulaParser

Disable tracing.

disable_tracing() - Method in class org.sbml.jsbml.math.parser.FormulaParserASTNode2

Disable tracing.

disable_tracing() - Method in class org.sbml.jsbml.math.parser.FormulaParserLL3

Disable tracing.

disable_tracing() - Method in class org.sbml.jsbml.math.parser.FormulaParserLL3ASTNode2

Disable tracing.

disable_tracing() - Method in class org.sbml.jsbml.text.parser.CobraFormulaParser

Disable tracing.

disable_tracing() - Method in class org.sbml.jsbml.text.parser.FormulaParser

Disable tracing.

disable_tracing() - Method in class org.sbml.jsbml.text.parser.FormulaParserASTNode2

Disable tracing.

disable_tracing() - Method in class org.sbml.jsbml.text.parser.FormulaParserLL3

Disable tracing.

disable_tracing() - Method in class org.sbml.jsbml.text.parser.FormulaParserLL3ASTNode2

Disable tracing.

disablePackage(String) - Method in class org.sbml.jsbml.AbstractSBase

Disables the given SBML Level 3 package on this SBMLDocument.

disablePackage(String) - Method in interface org.sbml.jsbml.SBase

Disables the given SBML Level 3 package on this SBMLDocument.

disablePackage(String) - Method in class org.sbml.jsbml.SBMLDocument

Disables the given SBML Level 3 package on this SBMLDocument.

distinctAttribute - Static variable in class org.sbml.jsbml.ext.groups.GroupsConstants

DistribConstants - Class in org.sbml.jsbml.ext.distrib

DistribConstants() - Constructor for class org.sbml.jsbml.ext.distrib.DistribConstants

DistribFunctionDefinitionPlugin - Class in org.sbml.jsbml.ext.distrib

DistribFunctionDefinitionPlugin(FunctionDefinition) - Constructor for class org.sbml.jsbml.ext.distrib.DistribFunctionDefinitionPlugin

Creates a new DistribFunctionDefinitionPlugin instance.

DistribFunctionDefinitionPlugin(DistribFunctionDefinitionPlugin) - Constructor for class org.sbml.jsbml.ext.distrib.DistribFunctionDefinitionPlugin

Creates a new DistribFunctionDefinitionPlugin instance, cloned from the input parameter.

distribInput - Static variable in class org.sbml.jsbml.ext.distrib.DistribConstants

DistribInput - Class in org.sbml.jsbml.ext.distrib

DistribInput() - Constructor for class org.sbml.jsbml.ext.distrib.DistribInput

Creates an DistribInput instance

DistribInput(String) - Constructor for class org.sbml.jsbml.ext.distrib.DistribInput

Creates a DistribInput instance with an id.

DistribInput(int, int) - Constructor for class org.sbml.jsbml.ext.distrib.DistribInput

Creates a DistribInput instance with a level and version.

DistribInput(String, int, int) - Constructor for class org.sbml.jsbml.ext.distrib.DistribInput

Creates a DistribInput instance with an id, level, and version.

DistribInput(String, String, int, int) - Constructor for class org.sbml.jsbml.ext.distrib.DistribInput

Creates a DistribInput instance with an id, name, level, and version.

DistribInput(DistribInput) - Constructor for class org.sbml.jsbml.ext.distrib.DistribInput

Clone constructor

DistribModelBuilder - Class in org.sbml.jsbml.ext.distrib.util

This class provides a collection of convenient methods to create SBML elements related to the distrib package.

DistribModelBuilder() - Constructor for class org.sbml.jsbml.ext.distrib.util.DistribModelBuilder

DistribParser - Class in org.sbml.jsbml.xml.parsers

This class is used to parse the distrib extension package elements and attributes.

DistribParser() - Constructor for class org.sbml.jsbml.xml.parsers.DistribParser

DistribSBasePlugin - Class in org.sbml.jsbml.ext.distrib

DistribSBasePlugin(SBase) - Constructor for class org.sbml.jsbml.ext.distrib.DistribSBasePlugin

Creates a new DistribSBasePlugin instance.

DistribSBasePlugin(DistribSBasePlugin) - Constructor for class org.sbml.jsbml.ext.distrib.DistribSBasePlugin

Creates a new DistribSBasePlugin instance, cloned from the input parameter.

DIVIDE - Static variable in interface org.sbml.jsbml.math.parser.FormulaParserASTNode2Constants

RegularExpression Id.

DIVIDE - Static variable in interface org.sbml.jsbml.math.parser.FormulaParserConstants

RegularExpression Id.

DIVIDE - Static variable in interface org.sbml.jsbml.math.parser.FormulaParserLL3ASTNode2Constants

RegularExpression Id.

DIVIDE - Static variable in interface org.sbml.jsbml.math.parser.FormulaParserLL3Constants

RegularExpression Id.

DIVIDE - Static variable in interface org.sbml.jsbml.text.parser.CobraFormulaParserConstants

RegularExpression Id.

DIVIDE - Static variable in interface org.sbml.jsbml.text.parser.FormulaParserASTNode2Constants

RegularExpression Id.

DIVIDE - Static variable in interface org.sbml.jsbml.text.parser.FormulaParserConstants

RegularExpression Id.

DIVIDE - Static variable in interface org.sbml.jsbml.text.parser.FormulaParserLL3ASTNode2Constants

RegularExpression Id.

DIVIDE - Static variable in interface org.sbml.jsbml.text.parser.FormulaParserLL3Constants

RegularExpression Id.

divideBy(ASTNode) - Method in class org.sbml.jsbml.ASTNode

Divides this node by the given node

divideBy(CallableSBase) - Method in class org.sbml.jsbml.ASTNode

Divides this node by the given SBML element.

divideBy(ASTNode2, ASTNode2) - Static method in class org.sbml.jsbml.math.ASTFactory

Divides an ASTNode2 by another ASTNode2

divideBy(UnitDefinition) - Method in class org.sbml.jsbml.UnitDefinition

Divides this unit definition by the second unit definition.

DocumentFactory - Interface in org.sbml.jsbml.util

* An interface for XML DOM document factories.

Domain - Class in org.sbml.jsbml.ext.spatial

Domain() - Constructor for class org.sbml.jsbml.ext.spatial.Domain

Domain(int, int) - Constructor for class org.sbml.jsbml.ext.spatial.Domain

Domain(String, int, int) - Constructor for class org.sbml.jsbml.ext.spatial.Domain

Domain(Domain) - Constructor for class org.sbml.jsbml.ext.spatial.Domain

domain - Static variable in class org.sbml.jsbml.ext.spatial.SpatialConstants

domain1 - Static variable in class org.sbml.jsbml.ext.spatial.SpatialConstants

domain2 - Static variable in class org.sbml.jsbml.ext.spatial.SpatialConstants

DomainType - Class in org.sbml.jsbml.ext.spatial

DomainType() - Constructor for class org.sbml.jsbml.ext.spatial.DomainType

DomainType(DomainType) - Constructor for class org.sbml.jsbml.ext.spatial.DomainType

DomainType(int, int) - Constructor for class org.sbml.jsbml.ext.spatial.DomainType

DomainType(String, int, int) - Constructor for class org.sbml.jsbml.ext.spatial.DomainType

domainType - Static variable in class org.sbml.jsbml.ext.spatial.SpatialConstants

Done() - Method in class org.sbml.jsbml.math.parser.SimpleCharStream

Reset buffer when finished.

Done() - Method in class org.sbml.jsbml.text.parser.SimpleCharStream

Reset buffer when finished.

drawFromDistribution - Static variable in class org.sbml.jsbml.ext.distrib.DistribConstants

DrawFromDistribution - Class in org.sbml.jsbml.ext.distrib

DrawFromDistribution() - Constructor for class org.sbml.jsbml.ext.distrib.DrawFromDistribution

Creates a DrawFromDistribution instance

DrawFromDistribution(int, int) - Constructor for class org.sbml.jsbml.ext.distrib.DrawFromDistribution

Creates a DrawFromDistribution instance with a level and version.

DrawFromDistribution(DrawFromDistribution) - Constructor for class org.sbml.jsbml.ext.distrib.DrawFromDistribution

Clone constructor

DUPLICATE_IDENTIFIER_MSG - Static variable in exception org.sbml.jsbml.IdentifierException

DUPLICATE_OBJECT_ID - Static variable in class org.sbml.jsbml.JSBML

DynCompartmentPlugin - Class in org.sbml.jsbml.ext.dyn

DynCompartmentPlugin() - Constructor for class org.sbml.jsbml.ext.dyn.DynCompartmentPlugin

Empty constructor

DynCompartmentPlugin(Compartment) - Constructor for class org.sbml.jsbml.ext.dyn.DynCompartmentPlugin

Constructor

DynCompartmentPlugin(DynCompartmentPlugin) - Constructor for class org.sbml.jsbml.ext.dyn.DynCompartmentPlugin

Constructor

DynConstants - Class in org.sbml.jsbml.ext.dyn

Contains some constants related to the Dynamic Structures package.

DynConstants() - Constructor for class org.sbml.jsbml.ext.dyn.DynConstants

dynElement - Static variable in class org.sbml.jsbml.ext.dyn.DynConstants

DynElement - Class in org.sbml.jsbml.ext.dyn

DynElement() - Constructor for class org.sbml.jsbml.ext.dyn.DynElement

Empty constructor

DynElement(int, int) - Constructor for class org.sbml.jsbml.ext.dyn.DynElement

Constructor

DynElement(String, String, int, int) - Constructor for class org.sbml.jsbml.ext.dyn.DynElement

Constructor

DynElement(DynElement) - Constructor for class org.sbml.jsbml.ext.dyn.DynElement

Constructor

DynEventPlugin - Class in org.sbml.jsbml.ext.dyn

DynEventPlugin() - Constructor for class org.sbml.jsbml.ext.dyn.DynEventPlugin

Empty constructor

DynEventPlugin(Event) - Constructor for class org.sbml.jsbml.ext.dyn.DynEventPlugin

Constructor

DynEventPlugin(DynEventPlugin) - Constructor for class org.sbml.jsbml.ext.dyn.DynEventPlugin

Constructor

DynParser - Class in org.sbml.jsbml.xml.parsers

This class is used to parse the dynamic structures extension package elements and attributes.

DynParser() - Constructor for class org.sbml.jsbml.xml.parsers.DynParser

DynSBasePlugin - Class in org.sbml.jsbml.ext.dyn

DynSBasePlugin() - Constructor for class org.sbml.jsbml.ext.dyn.DynSBasePlugin

Empty constructor

DynSBasePlugin(DynSBasePlugin) - Constructor for class org.sbml.jsbml.ext.dyn.DynSBasePlugin

Constructor

DynSBasePlugin(SBase) - Constructor for class org.sbml.jsbml.ext.dyn.DynSBasePlugin

Constructor

A B C D E F G H I J K L M N O P Q R S T U V W X Y Z